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comparison qiime2/qiime_feature-classifier_classify-consensus-blast.xml @ 6:de4c22a52df4 draft

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Fixes
author florianbegusch
date Tue, 13 Aug 2019 07:46:48 -0400
parents 914fa4daf16a
children f190567fe3f6
comparison
equal deleted inserted replaced
5:a025a4a89e07 6:de4c22a52df4
17 #set $tax = $id_to_taxonomy_fp.taxonomy_fp.fields.path 17 #set $tax = $id_to_taxonomy_fp.taxonomy_fp.fields.path
18 --i-reference-taxonomy '$tax' 18 --i-reference-taxonomy '$tax'
19 #end if 19 #end if
20 20
21 21
22 #if $pmaxaccepts: 22 #if str($pmaxaccepts):
23 --p-maxaccepts=$pmaxaccepts 23 --p-maxaccepts=$pmaxaccepts
24 #end if 24 #end if
25 25
26 #if $ppercidentity: 26 #if str($ppercidentity):
27 --p-perc-identity=$ppercidentity 27 --p-perc-identity=$ppercidentity
28 #end if 28 #end if
29 29
30 #if $pquerycov: 30 #if str($pquerycov):
31 --p-query-cov=$pquerycov 31 --p-query-cov=$pquerycov
32 #end if 32 #end if
33 33
34 #if str($pstrand) != 'None': 34 #if str($pstrand) != 'None':
35 --p-strand=$pstrand 35 --p-strand=$pstrand
36 #end if 36 #end if
37 37
38 #if $pevalue: 38 #if str($pevalue):
39 --p-evalue=$pevalue 39 --p-evalue=$pevalue
40 #end if 40 #end if
41 41
42 #if $pminconsensus: 42 #if str($pminconsensus):
43 --p-min-consensus=$pminconsensus 43 --p-min-consensus=$pminconsensus
44 #end if 44 #end if
45 45
46 46
47 47