Mercurial > repos > florianbegusch > qiime2_suite
diff qiime2/merge_feature_table_and_taxonomy.xml @ 4:914fa4daf16a draft
Fixes
author | florianbegusch |
---|---|
date | Wed, 31 Jul 2019 03:06:00 -0400 |
parents | 370e0b6e9826 |
children | f190567fe3f6 |
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--- a/qiime2/merge_feature_table_and_taxonomy.xml Sun Jul 21 02:21:34 2019 -0400 +++ b/qiime2/merge_feature_table_and_taxonomy.xml Wed Jul 31 03:06:00 2019 -0400 @@ -7,8 +7,8 @@ <command> mkdir out; -qiime tools export --input-path --output-path out $taxonomy_qza; -qiime tools export --input-path --output-path out $biom_qza; +qiime tools export --input-path $taxonomy_qza --output-path out; +qiime tools export --input-path $biom_qza --output-path out; sed -i '1s;^;#;' out/*.tsv; sed -i 's/Confidence/confidence/g' out/*.tsv;