diff qiime2/qiime_feature-classifier_classify-consensus-vsearch.xml @ 4:914fa4daf16a draft

Fixes

--- a/qiime2/qiime_feature-classifier_classify-consensus-vsearch.xml	Sun Jul 21 02:21:34 2019 -0400
+++ b/qiime2/qiime_feature-classifier_classify-consensus-vsearch.xml	Wed Jul 31 03:06:00 2019 -0400
@@ -20,6 +20,7 @@
 #end if
 
 
+
 #if $pmaxaccepts:
  --p-maxaccepts=$pmaxaccepts
 #end if
@@ -40,10 +41,22 @@
  --p-min-consensus=$pminconsensus
 #end if
 
+
+
+
+
+#if '__sq__' in str($punassignablelabel):
+  #set $punassignablelabel_temp = $punassignablelabel.replace('__sq__', "'")
+  #set $punassignablelabel = $punassignablelabel_temp
+#end if
+
 #if str($punassignablelabel):
  --p-unassignable-label="$punassignablelabel"
 #end if
 
+
+
+
 #set $pthreads = '${GALAXY_SLOTS:-4}'
 #if str($pthreads):
  --p-threads="$pthreads"
@@ -81,7 +94,7 @@
 			<option value="plus">plus</option>
 		</param>
 		<param label="--p-min-consensus: NUMBER Range(0.5, 1.0, inclusive_start=False, inclusive_end=True)   Minimum fraction of assignments must match top hit to be accepted as consensus assignment. Must be in range (0.5, 1.0].                    [default: 0.51]" name="pminconsensus" optional="True" type="float" min="0.5" max="1" exclude_min="True" exclude_max="False" value="0.51"/>
-		<param label="--p-unassignable-label: TEXT [default: 'Unassigned']" name="punassignablelabel" optional="True" type="text" value="'Unassigned'"/>
+		<param label="--p-unassignable-label: TEXT [default: 'Unassigned']" name="punassignablelabel" optional="True" type="text" value="Unassigned"/>
 	</inputs>
 	<outputs>
 		<data format="qza" label="${tool.name} on ${on_string}: classification.qza" name="oclassification"/>