view qiime2-2020.8/qiime_feature-table_transpose.xml @ 20:d93d8888f0b0 draft

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<?xml version="1.0" ?>
<tool id="qiime_feature-table_transpose" name="qiime feature-table transpose"
      version="2020.8">
  <description>Transpose a feature table.</description>
  <requirements>
    <requirement type="package" version="2020.8">qiime2</requirement>
  </requirements>
  <command><![CDATA[
qiime feature-table transpose

--i-table=$itable

--o-transposed-feature-table=otransposedfeaturetable

#if str($examples) != 'None':
--examples=$examples
#end if

;
cp otransposedfeaturetable.qza $otransposedfeaturetable

  ]]></command>
  <inputs>
    <param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] The feature table to be transposed.          [required]" name="itable" optional="False" type="data" />
    <param label="--examples: Show usage examples and exit." name="examples" optional="False" type="data" />
    
  </inputs>

  <outputs>
    <data format="qza" label="${tool.name} on ${on_string}: transposedfeaturetable.qza" name="otransposedfeaturetable" />
    
  </outputs>

  <help><![CDATA[
Transpose a feature table.
###############################################################

Transpose the rows and columns (typically samples and features) of a
feature table.

Parameters
----------
table : FeatureTable[Frequency]
    The feature table to be transposed.

Returns
-------
transposed_feature_table : FeatureTable[Frequency]
    The resulting transposed feature table.
  ]]></help>
  <macros>
    <import>qiime_citation.xml</import>
  </macros>
  <expand macro="qiime_citation"/>
</tool>