# HG changeset patch # User fmercuri # Date 1624877276 0 # Node ID 76856152f47af8edec8df90885892358c5a40f32 # Parent 7f3fb5575cf3652acf9df4e19e09510ba39a0c3c Uploaded diff -r 7f3fb5575cf3 -r 76856152f47a npt.xml --- a/npt.xml Mon Jun 28 10:44:34 2021 +0000 +++ b/npt.xml Mon Jun 28 10:47:56 2021 +0000 @@ -19,7 +19,7 @@ ln -s '$top_input' ./top_input.top && ln -s '$itp_input' ./posres.itp && - gmx grompp -f ./npt.mdp -c ./nvt.gro -r ./nvt.gro -t ./nvt.cpt -p ./top_input.top -o npt.tpr &>> verbose.txt && + gmx grompp -f ./npt.mdp -c ./nvt.gro -r ./nvt.gro -t ./nvt.cpt -p ./top_input.top -o npt.tpr -maxwarn 4 &>> verbose.txt && gmx mdrun -deffnm npt &>> verbose.txt #if $str == 'pdb' or $str == 'both'