Mercurial > repos > frogs > frogs_3_1_0
diff test-data/references/12-tsv2biom.log @ 0:59bc96331073 draft default tip
planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.1.0 commit 08296fc88e3e938c482c631bd515b3b7a0499647
author | frogs |
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date | Thu, 28 Feb 2019 10:14:49 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/references/12-tsv2biom.log Thu Feb 28 10:14:49 2019 -0500 @@ -0,0 +1,13 @@ +## Application +Software :/home/maria/workspace/git/FROGS/FROGS_master/test/../app/tsv_to_biom.py (version : 3.1) +Command : /home/maria/workspace/git/FROGS/FROGS_master/test/../app/tsv_to_biom.py --input-tsv res/10-biom2tsv.tsv --input-multi-affi res/10-biom2tsv-affiliation_multihit.tsv --output-biom res/12-tsv2biom.biom --output-fasta res/12-tsv2biom.fasta --log-file res/12-tsv2biom.log + +######################################################################################################## +# Converts a TSV file in Biom. (tsv2biom.py version : 1.1.0) +Command: + tsv2biom.py --input-file res/10-biom2tsv.tsv --input-multihits res/10-biom2tsv-affiliation_multihit.tsv --output-file res/12-tsv2biom.biom --output-fasta res/12-tsv2biom.fasta --fields comment blast_taxonomy blast_subject blast_perc_identity blast_perc_query_coverage blast_evalue blast_aln_length seed_id seed_sequence observation_name --samples-names 01 02 03 + +Execution: + start: 13 Feb 2019 11:14:37 + end: 13 Feb 2019 11:14:37 +