Mercurial > repos > frogs > frogs_3_1_0
diff test-data/databases/HVL_db.loc @ 0:59bc96331073 draft default tip
planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.1.0 commit 08296fc88e3e938c482c631bd515b3b7a0499647
author | frogs |
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date | Thu, 28 Feb 2019 10:14:49 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/databases/HVL_db.loc Thu Feb 28 10:14:49 2019 -0500 @@ -0,0 +1,34 @@ +# Copyright (C) 2014 INRA +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. +# +# +#This is a sample file that enables tools FROGS_affiliations_postprocess to solve +#inclusive amplicon sequence by selecting the smallest reference among multihit +#You will need to create or download exact amplicon sequence reference fasta file +#download link : http://genoweb.toulouse.inra.fr/frogs_databanks/HVL_reference +#Finally you will need to create HVL_db.loc file similar to this one in your galaxy +#tool-data directory.The HVL_db.loc file has this format (longer white space characters are +#TAB characters): +# +#<unique_database_name> <name> <file_path> +# +#First column will be the visible name in galaxy. +#So, for example, if you have UNITE 7.1 ITS1 (only!) stored +#in /galaxy_databanks/ITS/UNITE_7.1/UNITE_ITS1.fasta +#then the HVL_db.loc entry would look like this: +# +# +# EXAMPLE FOR TEST : +Unite_extract_ITS1_test Unite_extract_ITS1_test ${__HERE__}/HVL_db_data/Unite_extract_ITS1.fasta