Mercurial > repos > frogs > frogs_3_1_0
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planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.1.0 commit 08296fc88e3e938c482c631bd515b3b7a0499647
author | frogs |
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date | Thu, 28 Feb 2019 10:14:49 -0500 |
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## Application Software: normalisation.py (version: 3.1) Command: ./../app/normalisation.py -n 100 -f res/04-filters.fasta -i res/06-affiliation.biom -s res/normalisation_report.html -l res/normalisation.log Application start: 13 Feb 2019 11:24:00 #Normalisation calculation start: 13 Feb 2019 11:24:00 ######################################################################################################## # Random sampling in each sample. (biomTools.py version : 0.10.1) Command: biomTools.py sampling --nb-sampled 100 --input-file res/06-affiliation.biom --output-file abundance.biom Execution: start: 13 Feb 2019 11:24:00 end: 13 Feb 2019 11:24:00 end: 13 Feb 2019 11:24:00 ######################################################################################################## # Update fasta file based on sequence in biom file (biomFastaUpdate.py version : 1.0.1) Command: biomFastaUpdate.py --input-biom abundance.biom --input-fasta res/04-filters.fasta --output-file sequence.fasta --log 1550053440.26_4588_tmp_fasta_update.log Execution: start: 13 Feb 2019 11:24:00 end: 13 Feb 2019 11:24:00 #Summarise start: 13 Feb 2019 11:24:00 end: 13 Feb 2019 11:24:00 Application end: 13 Feb 2019 11:24:00