diff cluster_asv_report_macros.xml @ 0:cd7675c5b15a draft

planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 78ca62b54aee22893d278d9c3d495527be405f8a

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/cluster_asv_report_macros.xml	Wed Feb 04 13:15:55 2026 +0000
@@ -0,0 +1,32 @@
+<?xml version="1.0"?>
+<macros>
+    <token name="@CLUSTER_ASV_REPORT_CMD_LINE@">
+        cluster_asv_report.py
+            --input-biom '$input_biom'
+            #if $hierarchical_clustering == "yes"
+            --hierarchical-clustering
+            #end if
+            
+            --html '$html'
+    </token>
+
+    <xml name="cluster_asv_report_inputs">
+        <!-- Files -->
+        <param argument="--input-biom" type="data" format="biom1" label="Abundance file (format: BIOM)" help="The abundance file to filter." />
+            <!-- Parameter -->
+        <param argument="--hierarchical-clustering" type="select" display="radio" label="Perform sample hierarchical clustering" help="Enables a sample hierarchical clustering (based on Bray Curtis distance and average linkage function) but with an increased computational cost.">
+            <option value="yes" >Yes</option>
+            <option value="no" selected="true" >No</option>
+		</param>
+    </xml>
+
+    <!-- Test -->
+    <xml name="cluster_asv_report_test_input">
+        <param name="input_biom" value="references/09-normalisation.biom" />
+    </xml>
+    
+    <xml name="cluster_asv_report_test_output">
+        <output name="html" file="references/10-clusters-asv-report.html" compare="diff" lines_diff="0" />
+    </xml>     
+
+</macros>