directory /test-data/references/ @ 2:76ff9af5c0a3 draft default tip

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file 01-reads_processing-454-swarm.biom 349583 -rw-r--r--
file 01-reads_processing-454-swarm.fasta 1652680 -rw-r--r--
file 01-reads_processing-454-swarm.html 872349 -rw-r--r--
file 01-reads_processing-454-swarm_compo.tsv 104741 -rw-r--r--
file 01-reads_processing-dada2-clusters.biom 914 -rw-r--r--
file 01-reads_processing-dada2-clusters.fasta 2389 -rw-r--r--
file 01-reads_processing-dada2.html 867410 -rw-r--r--
file 01-reads_processing-long-dada2.biom 12033 -rw-r--r--
file 01-reads_processing-long-dada2.fasta 217315 -rw-r--r--
file 01-reads_processing-long-dada2.html 869174 -rw-r--r--
file 01-reads_processing-long-swarm.biom 313053 -rw-r--r--
file 01-reads_processing-long-swarm.fasta 4254606 -rw-r--r--
file 01-reads_processing-long-swarm.html 873742 -rw-r--r--
file 01-reads_processing-long-swarm_compo.tsv 126828 -rw-r--r--
file 01-reads_processing-swarm-vsearch.biom 6451 -rw-r--r--
file 01-reads_processing-swarm-vsearch.fasta 19491 -rw-r--r--
file 01-reads_processing-swarm-vsearch.html 872144 -rw-r--r--
file 01-reads_processing-swarm-vsearch_compo.tsv 83987 -rw-r--r--
file 03-chimera.biom 6451 -rw-r--r--
file 03-chimera.fasta 19491 -rw-r--r--
file 03-chimera.html 858026 -rw-r--r--
file 04-filters.biom 6265 -rw-r--r--
file 04-filters.excluded 215 -rw-r--r--
file 04-filters.fasta 18854 -rw-r--r--
file 04-filters.html 977137 -rw-r--r--
file 05-itsx-excluded.fasta 0 -rw-r--r--
file 05-itsx.biom 6265 -rw-r--r--
file 05-itsx.fasta 16133 -rw-r--r--
file 05-itsx.html 858560 -rw-r--r--
file 06-affiliation.biom 45033 -rw-r--r--
file 06-affiliation.html 1056370 -rw-r--r--
file 07-affiliation_masked.biom 32038 -rw-r--r--
file 07-affiliation_masked.html 1173947 -rw-r--r--
file 07-impacted_ASV_masked.tsv 20492 -rw-r--r--
file 07-impacted_ASV_masked_multihit.tsv 152 -rw-r--r--
file 08-affiliation_postprocessed.biom 45058 -rw-r--r--
file 08-affiliation_postprocessed.compo.tsv 369 -rw-r--r--
file 08-affiliation_postprocessed.fasta 18854 -rw-r--r--
file 09-normalisation.biom 40475 -rw-r--r--
file 09-normalisation.fasta 17261 -rw-r--r--
file 09-normalisation.html 848475 -rw-r--r--
file 10-clusters-asv-report.html 858432 -rw-r--r--
file 11-affiliation_report.html 1046244 -rw-r--r--
file 12-biom2tsv-affiliation_multihit.tsv 152 -rw-r--r--
file 12-biom2tsv.tsv 32299 -rw-r--r--
file 14-tsv2biom.biom 41244 -rw-r--r--
file 14-tsv2biom.fasta 14170 -rw-r--r--
file 15-tree-mafft.html 858375 -rw-r--r--
file 15-tree-mafft.nwk 1947 -rw-r--r--
file demultiplex_summary.txt 172 -rw-r--r--
file demultiplexed.tar.gz 28617 -rw-r--r--
file undemultiplexed.tar.gz 25455 -rw-r--r--