Mercurial > repos > fubar > bigwig_outlier_bed

comparison bigwig_outlier_bed.py @ 7:c8e22efcaeda draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bigwig_outlier_bed commit 9fa87e27ea819badb876e6d89807a789119b9f53
author fubar
date Wed, 24 Jul 2024 08:49:37 +0000
parents eb17eb8a3658
children 032e930ef6a1
comparison
equal deleted inserted replaced
6:eb17eb8a3658 7:c8e22efcaeda
188 bedhi = [] 188 bedhi = []
189 bedlo = [] 189 bedlo = []
190 restab = [] 190 restab = []
191 bwlabels = self.bwlabels 191 bwlabels = self.bwlabels
192 bwnames = self.bwnames 192 bwnames = self.bwnames
193 bwnames.sort()
193 reshead = "bigwig\tcontig\tn\tmean\tstd\tmin\tmax\tqtop\tqbot" 194 reshead = "bigwig\tcontig\tn\tmean\tstd\tmin\tmax\tqtop\tqbot"
194 for i, bwname in enumerate(bwnames): 195 for i, bwname in enumerate(bwnames):
195 bwlabel = bwlabels[i].replace(" ", "") 196 bwlabel = bwlabels[i].replace(" ", "")
196 fakepath = "in%d.bw" % i 197 fakepath = "in%d.bw" % i
197 if os.path.isfile(fakepath): 198 if os.path.isfile(fakepath):