Mercurial > repos > fubar > bigwig_outlier_bed
diff bigwig_outlier_bed.py @ 8:032e930ef6a1 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bigwig_outlier_bed commit 7eac2f224d3126002edd2c02d1133b23ac1a4881
| author | fubar |
|---|---|
| date | Wed, 24 Jul 2024 09:19:08 +0000 |
| parents | c8e22efcaeda |
| children |
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--- a/bigwig_outlier_bed.py Wed Jul 24 08:49:37 2024 +0000 +++ b/bigwig_outlier_bed.py Wed Jul 24 09:19:08 2024 +0000 @@ -214,9 +214,9 @@ first_few = ['%.2f\t%d' % (values[x],counts[x]) for x in range(10)] first_few += ['%.2f\t%d' % (values[x],counts[x]) for x in last10] first_few.insert(0,'First/Last 10 value counts\nValue\tCount') - ha = asciihist(data=bw, bins=20, str_tag=chr) + ha = asciihist(data=bw, bins=20, str_tag='%s_%s' % (bwlabel,chr)) histo = ha.draw() - histo = '\n'.join(first_few) + '\nHistogram of bigwig values\n' + histo + histo = '\n'.join(first_few) + '\nHistogram of %s bigwig values\n' % bwlabel + histo bw = bw[~np.isnan(bw)] # some have NaN if parts of a contig not covered if self.qhi is not None: self.bwtop = np.quantile(bw, self.qhi)