changeset 7:c8e22efcaeda draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bigwig_outlier_bed commit 9fa87e27ea819badb876e6d89807a789119b9f53
author fubar
date Wed, 24 Jul 2024 08:49:37 +0000
parents eb17eb8a3658
children 032e930ef6a1
files bigwig_outlier_bed.py bigwig_outlier_bed.xml
diffstat 2 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/bigwig_outlier_bed.py	Tue Jul 23 23:12:23 2024 +0000
+++ b/bigwig_outlier_bed.py	Wed Jul 24 08:49:37 2024 +0000
@@ -190,6 +190,7 @@
         restab = []
         bwlabels = self.bwlabels
         bwnames = self.bwnames
+        bwnames.sort()
         reshead =  "bigwig\tcontig\tn\tmean\tstd\tmin\tmax\tqtop\tqbot"
         for i, bwname in enumerate(bwnames):
             bwlabel = bwlabels[i].replace(" ", "")
--- a/bigwig_outlier_bed.xml	Tue Jul 23 23:12:23 2024 +0000
+++ b/bigwig_outlier_bed.xml	Wed Jul 24 08:49:37 2024 +0000
@@ -84,7 +84,7 @@
     <data name="bedoutlo" format="bed" label="Low bed" hidden="false">
       <filter>outbeds in ["outall", "outlohi", "outlo"]</filter>
     </data>
-    <data name="tableoutfile" format="tabular" label="Contig statistics" hidden="false">
+    <data name="tableoutfile" format="txt" label="Contig statistics" hidden="false">
       <filter>tableout == "create"</filter>
     </data>
   </outputs>