comparison jbrowse2.xml @ 135:21bb464c1d53 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 78bf7abb931bf3d348837c7211cd3cff32486691

134:ed3a21033188

                    <param name="genome" location="https://usegalaxy.eu/static/share/ebp/jbrowse2/test-data/Ppersica1.fa"/>
                    <param name="genome.ext" value="fasta"/>
                </conditional>
                <repeat name="track_groups">
                    <param name="category" value="Assembly properties"/>
                    <repeat name="data_tracks">
                        <conditional name="data_format">
                            <param name="data_format_select" value="paf"/>
                            <conditional name="useuri">
                                <param name="insource" value="history"/>

                                <param name="insource" value="history"/>
                                <param name="annotation" location="https://usegalaxy.eu/static/share/ebp/jbrowse2/test-data/Vvinifera1.fa"/>
                            </conditional>
                        </conditional>
                    </repeat>
                    <repeat name="data_tracks">
                        <conditional name="data_format">
                            <param name="data_format_select" value="paf"/>
                            <conditional name="useuri">
                                <param name="insource" value="history"/>

                <param name="zipOut" value="true"/>
                <param name="session_name" value="New test session"/>
            </section>
            <output name="output" ftype="zip">
                <assert_contents>
                    <has_archive_member path=".*" n="676" delta="10"/>
                    <has_archive_member path="index.html"/>
                    <has_archive_member path="manifest.json">
                        <has_text text="favicon.ico"/>
                        <has_text text="background_color"/>
                    </has_archive_member>

                <param name="session_name" value="Collection test"/>
                <param name="ucol|formcoll" value="collect"/>
            </section>
            <output name="output" ftype="zip">
                <assert_contents>
                    <has_archive_member path=".*" n="652" delta="10"/>
                    <has_archive_member path="index.html"/>
                    <has_archive_member path="manifest.json">
                        <has_text text="favicon.ico"/>
                        <has_text text="background_color"/>
                    </has_archive_member>

135:21bb464c1d53

                    <param name="genome" location="https://usegalaxy.eu/static/share/ebp/jbrowse2/test-data/Ppersica1.fa"/>
                    <param name="genome.ext" value="fasta"/>
                </conditional>
                <repeat name="track_groups">
                    <param name="category" value="Assembly properties"/>

                    <repeat name="data_tracks">
                        <conditional name="data_format">
                            <param name="data_format_select" value="paf"/>
                            <conditional name="useuri">
                                <param name="insource" value="history"/>

                                <param name="insource" value="history"/>
                                <param name="annotation" location="https://usegalaxy.eu/static/share/ebp/jbrowse2/test-data/Vvinifera1.fa"/>
                            </conditional>
                        </conditional>
                    </repeat>

                    <repeat name="data_tracks">
                        <conditional name="data_format">
                            <param name="data_format_select" value="paf"/>
                            <conditional name="useuri">
                                <param name="insource" value="history"/>

                <param name="zipOut" value="true"/>
                <param name="session_name" value="New test session"/>
            </section>
            <output name="output" ftype="zip">
                <assert_contents>
                    <has_archive_member path=".*" n="664" delta="10"/>
                    <has_archive_member path="index.html"/>
                    <has_archive_member path="manifest.json">
                        <has_text text="favicon.ico"/>
                        <has_text text="background_color"/>
                    </has_archive_member>

                <param name="session_name" value="Collection test"/>
                <param name="ucol|formcoll" value="collect"/>
            </section>
            <output name="output" ftype="zip">
                <assert_contents>
                    <has_archive_member path=".*" n="640" delta="10"/>
                    <has_archive_member path="index.html"/>
                    <has_archive_member path="manifest.json">
                        <has_text text="favicon.ico"/>
                        <has_text text="background_color"/>
                    </has_archive_member>