comparison jbrowse2.xml @ 22:2ddd41a0c2d5 draft

planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit be4f98b07024b59ff5e1ae0d8b467eecb15c7521-dirty

21:8e34214ccee4

                    <when value="wiggle">
                        <expand macro="input_conditional" label="BigWig Track Data" format="bigwig" />
                        <expand macro="track_visibility" />
                    </when>
                    <when value="paf">
                        <param label="Comparison genome sequence" help="Paf must use this as the reference to map the real reference sequence"
                            format="fasta"
                            name="synteny_genome"
                            type="data" />
                        <expand macro="input_conditional" label="Synteny data" format="paf" help="Make paf with minimap2 mapping real reference onto desired syntenic reference"/>
                        <expand macro="track_visibility" />

22:2ddd41a0c2d5

                    <when value="wiggle">
                        <expand macro="input_conditional" label="BigWig Track Data" format="bigwig" />
                        <expand macro="track_visibility" />
                    </when>
                    <when value="paf">
                        <param label="Comparison genome sequence" help="Paf from this as the reference, using the real reference as the reads to map"
                            format="fasta"
                            name="synteny_genome"
                            type="data" />
                        <expand macro="input_conditional" label="Synteny data" format="paf" help="Make paf with minimap2 mapping real reference onto desired syntenic reference"/>
                        <expand macro="track_visibility" />