Mercurial > repos > fubar > jbrowse2
comparison jbrowse2.xml @ 3:2de9f585505b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit b30d2e277cc360437a02fa812c577c0c8d997cff-dirty
| author | fubar |
|---|---|
| date | Tue, 09 Jan 2024 02:35:52 +0000 |
| parents | d78175596286 |
| children | efc64d8f4b72 |
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| 2:37b2c26c7b9b | 3:2de9f585505b |
|---|---|
| 956 ===================== | 956 ===================== |
| 957 | 957 |
| 958 A JBrowse2 history item can be opened by viewing it (the "eye" icon). | 958 A JBrowse2 history item can be opened by viewing it (the "eye" icon). |
| 959 They can also be downloaded as archives ("floppy disk" icon) to share and for local viewing. | 959 They can also be downloaded as archives ("floppy disk" icon) to share and for local viewing. |
| 960 One extra step is required before they can be viewed. A local python web server must be started using a script included in each archive. | 960 One extra step is required before they can be viewed. A local python web server must be started using a script included in each archive. |
| 961 Unzip the archive (*unzip [filename].zip*) and change to the first level directory. It contains a file named "servejb2.py" | 961 Unzip the archive (*unzip [filename].zip*) and change to the first level directory. It contains a file named "webserver.py" |
| 962 | 962 |
| 963 Assuming you have python3 installed, running: | 963 Assuming you have python3 installed, running: |
| 964 | 964 |
| 965 *python3 servjb2.py* | 965 *python3 webserver.py* |
| 966 | 966 |
| 967 will serve the unarchived JBrowse2 configuration, so it can be browsed by pointing a web browser to localhost:8080 | 967 will serve the unarchived JBrowse2 configuration, so it can be browsed by pointing a web browser to localhost:8080 |
| 968 | 968 |
| 969 Overview | 969 Overview |
| 970 -------- | 970 -------- |