Mercurial > repos > fubar > jbrowse2
comparison jbrowse2.xml @ 92:3c4db8203fad draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit f2fba2e6b169256dc9adfa141e3bd59665f08f78
| author | fubar |
|---|---|
| date | Sun, 21 Apr 2024 04:42:29 +0000 |
| parents | 6246925692cb |
| children | 4c517a0041a8 |
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| 91:6246925692cb | 92:3c4db8203fad |
|---|---|
| 230 </style> | 230 </style> |
| 231 #if str($track.data_format.data_format_select) == "bam": | 231 #if str($track.data_format.data_format_select) == "bam": |
| 232 <bam> | 232 <bam> |
| 233 <bam_index> | 233 <bam_index> |
| 234 #for $dataset in $track.data_format.useuri.annotation: | 234 #for $dataset in $track.data_format.useuri.annotation: |
| 235 ${dataset.name},${dataset.metadata.bam_index} | 235 ${dataset}:${dataset.metadata.bam_index}, |
| 236 #end for | 236 #end for |
| 237 </bam_index> | 237 </bam_index> |
| 238 </bam> | 238 </bam> |
| 239 #else if str($track.data_format.data_format_select) == "cram": | 239 #else if str($track.data_format.data_format_select) == "cram": |
| 240 <cram> | 240 <cram> |
| 241 <cram_index> | 241 <cram_index> |
| 242 #for $dataset in $track.data_format.useuri.annotation: | 242 #for $dataset in $track.data_format.useuri.annotation: |
| 243 ${dataset.name},${dataset.metadata.cram_index} | 243 ${dataset}:${dataset.metadata.cram_index}, |
| 244 #end for | 244 #end for |
| 245 </cram_index> | 245 </cram_index> |
| 246 </cram> | 246 </cram> |
| 247 #else if str($track.data_format.data_format_select) == "blastxml": | 247 #else if str($track.data_format.data_format_select) == "blastxml": |
| 248 <blast> | 248 <blast> |