Mercurial > repos > fubar > jbrowse2
comparison jbrowse2.xml @ 42:713d3a16ac02 draft
planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit 2feb3d2616ba482d4204463309aa0cc7f8081a15
| author | fubar |
|---|---|
| date | Fri, 01 Mar 2024 02:31:50 +0000 |
| parents | e1a3d3221ed3 |
| children | 7e14b3f1f8e1 |
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| 41:3e7a4ed46551 | 42:713d3a16ac02 |
|---|---|
| 150 <bam_index>${dataset.metadata.bam_index}</bam_index> | 150 <bam_index>${dataset.metadata.bam_index}</bam_index> |
| 151 #end for | 151 #end for |
| 152 </bam> | 152 </bam> |
| 153 #else if str($track.data_format.data_format_select) == "cram": | 153 #else if str($track.data_format.data_format_select) == "cram": |
| 154 <cram> | 154 <cram> |
| 155 <cram_indices> | |
| 156 #for $dataset in $track.data_format.annotation: | 155 #for $dataset in $track.data_format.annotation: |
| 157 <cram_index>${dataset.metadata.cram_index}</cram_index> | 156 <cram_index>${dataset.metadata.cram_index}</cram_index> |
| 158 #end for | 157 #end for |
| 159 </cram_indices> | |
| 160 </cram> | 158 </cram> |
| 161 #else if str($track.data_format.data_format_select) == "blastxml": | 159 #else if str($track.data_format.data_format_select) == "blastxml": |
| 162 <blast> | 160 <blast> |
| 163 #if str($track.data_format.blast_parent) != "": | 161 #if str($track.data_format.blast_parent) != "": |
| 164 <parent>${track.data_format.blast_parent}</parent> | 162 <parent>${track.data_format.blast_parent}</parent> |