comparison jbrowse2.py @ 14:7c2e28e144f3 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5d84967148d45684d585d4e12b210dc5e12e4776

13:1d86925dbb4c

                logging.info(
                    "@@@ regexp could not match contig:start..end in the supplied location %s - please fix"
                    % ddl
                )
        elif self.genome_name is not None:
            refName = self.genome_name
            start = 0
            end = 10000  # Booh, hard coded! waiting for https://github.com/GMOD/jbrowse-components/issues/2708
            logging.info(
                "@@@ no defaultlocation found for default session - please add one"
            )

14:7c2e28e144f3

                logging.info(
                    "@@@ regexp could not match contig:start..end in the supplied location %s - please fix"
                    % ddl
                )
        elif self.genome_name is not None:
            start = 0
            end = 10000  # Booh, hard coded! waiting for https://github.com/GMOD/jbrowse-components/issues/2708
            logging.info(
                "@@@ no defaultlocation found for default session - please add one"
            )