Mercurial > repos > fubar > jbrowse2
comparison jbrowse2.xml @ 43:7e14b3f1f8e1 draft
planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit 2feb3d2616ba482d4204463309aa0cc7f8081a15-dirty
| author | fubar |
|---|---|
| date | Fri, 01 Mar 2024 02:44:25 +0000 |
| parents | 713d3a16ac02 |
| children | 0ec526d2d8c1 |
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| 42:713d3a16ac02 | 43:7e14b3f1f8e1 |
|---|---|
| 98 <tracks> | 98 <tracks> |
| 99 #for $tg in $track_groups: | 99 #for $tg in $track_groups: |
| 100 #for $track in $tg.data_tracks: | 100 #for $track in $tg.data_tracks: |
| 101 <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}"> | 101 <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}"> |
| 102 #if $track.data_format.data_format_select != "sparql": | 102 #if $track.data_format.data_format_select != "sparql": |
| 103 <files> | |
| 103 #for $dataset in $track.data_format.annotation: | 104 #for $dataset in $track.data_format.annotation: |
| 104 <files> | |
| 105 <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.name}"> | 105 <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.name}"> |
| 106 <metadata> | 106 <metadata> |
| 107 <dataset id="${__app__.security.encode_id($dataset.id)}" hid="${dataset.hid}" | 107 <dataset id="${__app__.security.encode_id($dataset.id)}" hid="${dataset.hid}" |
| 108 size="${dataset.get_size(nice_size=True)}" | 108 size="${dataset.get_size(nice_size=True)}" |
| 109 edam_format="${dataset.datatype.edam_format}" | 109 edam_format="${dataset.datatype.edam_format}" |
| 134 tool_id="${dataset.creating_job.tool_id}" | 134 tool_id="${dataset.creating_job.tool_id}" |
| 135 tool_version="${dataset.creating_job.tool_version}" | 135 tool_version="${dataset.creating_job.tool_version}" |
| 136 /> | 136 /> |
| 137 </metadata> | 137 </metadata> |
| 138 </trackFile> | 138 </trackFile> |
| 139 </files> | 139 |
| 140 #end for | 140 #end for |
| 141 </files> | |
| 141 #else | 142 #else |
| 142 <track cat="${tg.category}" format="sparql" visibility="off"> | 143 <track cat="${tg.category}" format="sparql" visibility="off"> |
| 143 #end if | 144 #end if |
| 144 | 145 |
| 145 <options> | 146 <options> |