comparison jbrowse2.xml @ 33:9aedb7f1cc77 draft

planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit 48bc917d34af182e9158915862c8a35723660919-dirty
author fubar
date Sat, 24 Feb 2024 10:44:01 +0000
parents cb4b32ca9968
children 2893ef33fba9
comparison
equal deleted inserted replaced
32:fe48ed5810bd 33:9aedb7f1cc77
96 #for $track in $tg.data_tracks: 96 #for $track in $tg.data_tracks:
97 <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}"> 97 <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}">
98 #if $track.data_format.data_format_select != "sparql": 98 #if $track.data_format.data_format_select != "sparql":
99 <files> 99 <files>
100 #set dataset = $track.data_format.annotation 100 #set dataset = $track.data_format.annotation
101 <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.element_identifier}"> 101 <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.name}">
102 <metadata> 102 <metadata>
103 <dataset id="${__app__.security.encode_id($dataset.id)}" hid="${dataset.hid}" 103 <dataset id="${__app__.security.encode_id($dataset.id)}" hid="${dataset.hid}"
104 size="${dataset.get_size(nice_size=True)}" 104 size="${dataset.get_size(nice_size=True)}"
105 edam_format="${dataset.datatype.edam_format}" 105 edam_format="${dataset.datatype.edam_format}"
106 file_ext="${dataset.ext}" /> 106 file_ext="${dataset.ext}" />