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comparison x/config.json @ 129:d08080933718 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 6d8a6a308c219c112dbfc09fe48ad462746d6fb0
author fubar
date Mon, 07 Oct 2024 08:55:19 +0000
parents fbabf7498471
children
comparison
equal deleted inserted replaced
128:fce4ed3b1702 129:d08080933718
1 {
2 "plugins": [
3 {
4 "name": "BedScorePlugin",
5 "umdLoc": {
6 "uri": "bedscoreplugin.js"
7 }
8 },
9 {
10 "name": "MafViewer",
11 "url": "https://unpkg.com/jbrowse-plugin-mafviewer/dist/jbrowse-plugin-mafviewer.umd.production.min.js"
12 }
13 ],
14 "configuration": {
15 "disableAnalytics": false,
16 "theme": {
17 "palette": {
18 "primary": {
19 "main": "#0d233f"
20 },
21 "secondary": {
22 "main": "#721e63"
23 },
24 "tertiary": {
25 "main": "#135560"
26 },
27 "quaternary": {
28 "main": "#ffb11d"
29 }
30 },
31 "typography": {
32 "fontSize": 10
33 }
34 }
35 },
36 "defaultSession": {
37 "name": "New test session",
38 "views": [
39 {
40 "type": "LinearGenomeView",
41 "offsetPx": 0,
42 "bpPerPx": 50,
43 "minimized": false,
44 "tracks": [
45 {
46 "type": "FeatureTrack",
47 "configuration": "merlin.gff3_0",
48 "displays": [
49 {
50 "type": "LinearBasicDisplay",
51 "displayId": "merlin.gff3_0-LinearBasicDisplay",
52 "trackShowLabels": false,
53 "trackShowDescriptions": false,
54 "configuration": "merlin.gff3_0-LinearBasicDisplay"
55 }
56 ]
57 },
58 {
59 "type": "QuantitativeTrack",
60 "configuration": "merlin.bw_1",
61 "displays": [
62 {
63 "type": "LinearWiggleDisplay",
64 "displayId": "merlin.bw_1-LinearWiggleDisplay",
65 "color": "#135560",
66 "autoscale": "globalsd",
67 "resolution": 1,
68 "summaryScoreMode": "whiskers",
69 "filled": false,
70 "scaleType": "linear",
71 "displayCrossHatches": false,
72 "configuration": "merlin.bw_1-LinearWiggleDisplay"
73 }
74 ]
75 },
76 {
77 "type": "FeatureTrack",
78 "configuration": "test-6.bed_2",
79 "displays": [
80 {
81 "type": "LinearBasicDisplay",
82 "displayId": "test-6.bed_2-LinearBasicDisplay",
83 "trackShowLabels": false,
84 "trackShowDescriptions": false,
85 "configuration": "test-6.bed_2-LinearBasicDisplay"
86 }
87 ]
88 },
89 {
90 "type": "VariantTrack",
91 "configuration": "merlin.vcf_3",
92 "displays": [
93 {
94 "type": "LinearVariantDisplay",
95 "displayId": "merlin.vcf_3-LinearVariantDisplay",
96 "trackShowLabels": false,
97 "trackShowDescriptions": false,
98 "configuration": "merlin.vcf_3-LinearVariantDisplay"
99 }
100 ]
101 },
102 {
103 "type": "AlignmentsTrack",
104 "configuration": "merlin.cram_4",
105 "displays": [
106 {
107 "type": "LinearAlignmentsDisplay",
108 "displayId": "merlin.cram_4-LinearAlignmentsDisplay",
109 "configuration": "merlin.cram_4-LinearAlignmentsDisplay"
110 }
111 ]
112 },
113 {
114 "type": "AlignmentsTrack",
115 "configuration": "merlin-sample.bam_5",
116 "displays": [
117 {
118 "type": "LinearAlignmentsDisplay",
119 "displayId": "merlin-sample.bam_5-LinearAlignmentsDisplay",
120 "configuration": "merlin-sample.bam_5-LinearAlignmentsDisplay"
121 }
122 ]
123 },
124 {
125 "type": "MafTrack",
126 "configuration": "merlinlastz.maf_6",
127 "displays": [
128 {
129 "type": "LinearBasicDisplay",
130 "displayId": "merlinlastz.maf_6-LinearBasicDisplay",
131 "trackShowLabels": false,
132 "trackShowDescriptions": false,
133 "configuration": "merlinlastz.maf_6-LinearBasicDisplay"
134 }
135 ]
136 },
137 {
138 "type": "FeatureTrack",
139 "configuration": "merlin.blastxml_7",
140 "displays": [
141 {
142 "type": "LinearBasicDisplay",
143 "displayId": "merlin.blastxml_7-LinearBasicDisplay",
144 "trackShowLabels": false,
145 "trackShowDescriptions": false,
146 "configuration": "merlin.blastxml_7-LinearBasicDisplay"
147 }
148 ]
149 }
150 ],
151 "displayedRegions": [
152 {
153 "reversed": false,
154 "assemblyName": "Merlin",
155 "refName": "Merlin",
156 "start": 0,
157 "end": 172788
158 }
159 ]
160 },
161 {
162 "type": "LinearGenomeView",
163 "offsetPx": 0,
164 "bpPerPx": 50,
165 "minimized": false,
166 "tracks": [
167 {
168 "type": "HicTrack",
169 "configuration": "dm3test.cool_9",
170 "displays": [
171 {
172 "type": "LinearHicDisplay",
173 "configuration": "dm3test.cool_9-LinearHicDisplay"
174 }
175 ]
176 }
177 ],
178 "displayedRegions": [
179 {
180 "reversed": false,
181 "assemblyName": "dm3.fa",
182 "refName": "NT_037436.4",
183 "start": 0,
184 "end": 28110227
185 }
186 ]
187 },
188 {
189 "type": "LinearGenomeView",
190 "offsetPx": 0,
191 "bpPerPx": 50,
192 "minimized": false,
193 "tracks": [
194 {
195 "type": "SyntenyTrack",
196 "configuration": "peach-grape-map.paf_10",
197 "displays": [
198 {
199 "type": "LGVSyntenyDisplay",
200 "displayId": "peach-grape-map.paf_10-LinearBasicDisplay",
201 "configuration": "peach-grape-map.paf_10-LGVSyntenyDisplay"
202 }
203 ]
204 },
205 {
206 "type": "SyntenyTrack",
207 "configuration": "arabgrapepeach.paf_11",
208 "displays": [
209 {
210 "type": "LGVSyntenyDisplay",
211 "displayId": "arabgrapepeach.paf_11-LinearBasicDisplay",
212 "configuration": "arabgrapepeach.paf_11-LGVSyntenyDisplay"
213 }
214 ]
215 },
216 {
217 "type": "SyntenyTrack",
218 "configuration": "arabgrapepeach.paf_12",
219 "displays": [
220 {
221 "type": "LGVSyntenyDisplay",
222 "displayId": "arabgrapepeach.paf_12-LinearBasicDisplay",
223 "configuration": "arabgrapepeach.paf_12-LGVSyntenyDisplay"
224 }
225 ]
226 }
227 ],
228 "displayedRegions": [
229 {
230 "reversed": false,
231 "assemblyName": "Ppersica1.fa",
232 "refName": "Pp01",
233 "start": 0,
234 "end": 47851208
235 }
236 ]
237 },
238 {
239 "type": "LinearGenomeView",
240 "offsetPx": 0,
241 "bpPerPx": 50,
242 "minimized": false,
243 "tracks": [
244 {
245 "type": "HicTrack",
246 "configuration": "humanhic_13",
247 "displays": [
248 {
249 "type": "LinearHicDisplay",
250 "configuration": "humanhic_13-LinearHicDisplay"
251 }
252 ]
253 }
254 ],
255 "displayedRegions": [
256 {
257 "reversed": false,
258 "assemblyName": "hg38",
259 "refName": "1",
260 "start": 0,
261 "end": 248956422
262 }
263 ]
264 }
265 ]
266 },
267 "tracks": [
268 {
269 "type": "FeatureTrack",
270 "trackId": "merlin.gff3_0",
271 "name": "merlin.gff3_0",
272 "assemblyNames": [
273 "Merlin"
274 ],
275 "category": [
276 "Assembly properties"
277 ],
278 "adapter": {
279 "type": "Gff3TabixAdapter",
280 "gffGzLocation": {
281 "uri": "merlin.gff3_0.gz"
282 },
283 "index": {
284 "location": {
285 "uri": "merlin.gff3_0.gz.tbi"
286 }
287 }
288 },
289 "displays": [
290 {
291 "type": "LinearBasicDisplay",
292 "displayId": "merlin.gff3_0-LinearBasicDisplay"
293 },
294 {
295 "type": "LinearArcDisplay",
296 "displayId": "merlin.gff3_0-LinearArcDisplay"
297 }
298 ],
299 "style": {
300 "type": "LinearBasicDisplay",
301 "displayId": "merlin.gff3_0-LinearBasicDisplay",
302 "trackShowLabels": false,
303 "trackShowDescriptions": false,
304 "configuration": "merlin.gff3_0-LinearBasicDisplay"
305 }
306 },
307 {
308 "type": "QuantitativeTrack",
309 "trackId": "merlin.bw_1",
310 "name": "merlin.bw_1",
311 "category": [
312 "Assembly properties"
313 ],
314 "assemblyNames": [
315 "Merlin"
316 ],
317 "adapter": {
318 "type": "BigWigAdapter",
319 "bigWigLocation": {
320 "uri": "merlin.bw_1"
321 }
322 },
323 "displays": [
324 {
325 "type": "LinearWiggleDisplay",
326 "displayId": "merlin.bw_1-LinearWiggleDisplay"
327 }
328 ],
329 "style": {
330 "type": "LinearWiggleDisplay",
331 "displayId": "merlin.bw_1-LinearWiggleDisplay",
332 "color": "#135560",
333 "autoscale": "globalsd",
334 "resolution": 1,
335 "summaryScoreMode": "whiskers",
336 "filled": false,
337 "scaleType": "linear",
338 "displayCrossHatches": false,
339 "configuration": "merlin.bw_1-LinearWiggleDisplay"
340 }
341 },
342 {
343 "type": "FeatureTrack",
344 "trackId": "test-6.bed_2",
345 "name": "test-6.bed_2",
346 "assemblyNames": [
347 "Merlin"
348 ],
349 "adapter": {
350 "category": [
351 "Assembly properties"
352 ],
353 "type": "BedTabixAdapter",
354 "bedGzLocation": {
355 "uri": "test-6.bed_2.gz",
356 "columnNames": [
357 "chr",
358 "start",
359 "end",
360 "name",
361 "score"
362 ],
363 "scoreColumn": "score"
364 },
365 "index": {
366 "location": {
367 "uri": "test-6.bed_2.gz.tbi"
368 }
369 }
370 },
371 "displays": [
372 {
373 "type": "LinearBasicDisplay",
374 "displayId": "test-6.bed_2-LinearBasicDisplay",
375 "renderer": {
376 "type": "SvgFeatureRenderer",
377 "color1": "jexl:customColor(feature)"
378 }
379 },
380 {
381 "type": "LinearPileupDisplay",
382 "displayId": "test-6.bed_2-LinearPileupDisplay"
383 },
384 {
385 "type": "LinearArcDisplay",
386 "displayId": "test-6.bed_2-LinearArcDisplay"
387 }
388 ],
389 "style": {
390 "type": "LinearBasicDisplay",
391 "displayId": "test-6.bed_2-LinearBasicDisplay",
392 "trackShowLabels": false,
393 "trackShowDescriptions": false,
394 "configuration": "test-6.bed_2-LinearBasicDisplay"
395 }
396 },
397 {
398 "type": "VariantTrack",
399 "trackId": "merlin.vcf_3",
400 "name": "merlin.vcf_3",
401 "assemblyNames": [
402 "Merlin"
403 ],
404 "category": [
405 "Assembly properties"
406 ],
407 "adapter": {
408 "type": "VcfTabixAdapter",
409 "vcfGzLocation": {
410 "uri": "merlin.vcf_3"
411 },
412 "index": {
413 "location": {
414 "uri": "merlin.vcf_3.tbi"
415 }
416 }
417 },
418 "displays": [
419 {
420 "type": "LinearVariantDisplay",
421 "displayId": "merlin.vcf_3-LinearVariantDisplay"
422 },
423 {
424 "type": "ChordVariantDisplay",
425 "displayId": "merlin.vcf_3-ChordVariantDisplay"
426 },
427 {
428 "type": "LinearPairedArcDisplay",
429 "displayId": "merlin.vcf_3-LinearPairedArcDisplay"
430 }
431 ],
432 "style": {
433 "type": "LinearVariantDisplay",
434 "displayId": "merlin.vcf_3-LinearVariantDisplay",
435 "trackShowLabels": false,
436 "trackShowDescriptions": false,
437 "configuration": "merlin.vcf_3-LinearVariantDisplay"
438 }
439 },
440 {
441 "type": "AlignmentsTrack",
442 "trackId": "merlin.cram_4",
443 "name": "merlin.cram_4",
444 "category": [
445 "Assembly properties"
446 ],
447 "assemblyNames": [
448 "Merlin"
449 ],
450 "adapter": {
451 "type": "CramAdapter",
452 "cramLocation": {
453 "uri": "merlin.cram_4"
454 },
455 "craiLocation": {
456 "uri": "merlin.cram_4.crai"
457 },
458 "sequenceAdapter": {
459 "type": "BgzipFastaAdapter",
460 "fastaLocation": {
461 "uri": "Merlin.fa.gz"
462 },
463 "faiLocation": {
464 "uri": "Merlin.fa.gz.fai"
465 },
466 "gziLocation": {
467 "uri": "Merlin.fa.gz.gzi"
468 }
469 }
470 },
471 "displays": [
472 {
473 "type": "LinearAlignmentsDisplay",
474 "displayId": "merlin.cram_4-LinearAlignmentsDisplay"
475 }
476 ],
477 "style": {
478 "type": "LinearAlignmentsDisplay",
479 "displayId": "merlin.cram_4-LinearAlignmentsDisplay",
480 "configuration": "merlin.cram_4-LinearAlignmentsDisplay"
481 }
482 },
483 {
484 "type": "AlignmentsTrack",
485 "trackId": "merlin-sample.bam_5",
486 "name": "merlin-sample.bam_5",
487 "category": [
488 "Assembly properties"
489 ],
490 "assemblyNames": [
491 "Merlin"
492 ],
493 "adapter": {
494 "type": "BamAdapter",
495 "bamLocation": {
496 "uri": "merlin-sample.bam_5"
497 },
498 "index": {
499 "location": {
500 "uri": "merlin-sample.bam_5.bai"
501 }
502 }
503 },
504 "displays": [
505 {
506 "type": "LinearAlignmentsDisplay",
507 "displayId": "merlin-sample.bam_5-LinearAlignmentsDisplay"
508 }
509 ],
510 "style": {
511 "type": "LinearAlignmentsDisplay",
512 "displayId": "merlin-sample.bam_5-LinearAlignmentsDisplay",
513 "configuration": "merlin-sample.bam_5-LinearAlignmentsDisplay"
514 }
515 },
516 {
517 "type": "MafTrack",
518 "trackId": "merlinlastz.maf_6",
519 "name": "merlinlastz.maf_6",
520 "category": [
521 "Assembly properties"
522 ],
523 "adapter": {
524 "type": "MafTabixAdapter",
525 "samples": [
526 "Merlin",
527 "Merlin1",
528 "Merlin2",
529 "Merlin3",
530 "Merlin4",
531 "Merlin5",
532 "Merlin6"
533 ],
534 "bedGzLocation": {
535 "uri": "merlinlastz.maf_6.sorted.bed.gz"
536 },
537 "index": {
538 "location": {
539 "uri": "merlinlastz.maf_6.sorted.bed.gz.tbi"
540 }
541 }
542 },
543 "assemblyNames": [
544 "Merlin"
545 ],
546 "displays": [
547 {
548 "type": "LinearBasicDisplay",
549 "displayId": "merlinlastz.maf_6-LinearBasicDisplay"
550 },
551 {
552 "type": "LinearArcDisplay",
553 "displayId": "merlinlastz.maf_6-LinearArcDisplay"
554 }
555 ],
556 "style": {
557 "type": "LinearBasicDisplay",
558 "displayId": "merlinlastz.maf_6-LinearBasicDisplay",
559 "trackShowLabels": false,
560 "trackShowDescriptions": false,
561 "configuration": "merlinlastz.maf_6-LinearBasicDisplay"
562 }
563 },
564 {
565 "type": "FeatureTrack",
566 "trackId": "merlin.blastxml_7",
567 "name": "merlin.blastxml_7",
568 "assemblyNames": [
569 "Merlin"
570 ],
571 "category": [
572 "Assembly properties"
573 ],
574 "adapter": {
575 "type": "Gff3TabixAdapter",
576 "gffGzLocation": {
577 "uri": "merlin.blastxml_7.gz"
578 },
579 "index": {
580 "location": {
581 "uri": "merlin.blastxml_7.gz.tbi"
582 }
583 }
584 },
585 "displays": [
586 {
587 "type": "LinearBasicDisplay",
588 "displayId": "merlin.blastxml_7-LinearBasicDisplay"
589 },
590 {
591 "type": "LinearArcDisplay",
592 "displayId": "merlin.blastxml_7-LinearArcDisplay"
593 }
594 ],
595 "style": {
596 "type": "LinearBasicDisplay",
597 "displayId": "merlin.blastxml_7-LinearBasicDisplay",
598 "trackShowLabels": false,
599 "trackShowDescriptions": false,
600 "configuration": "merlin.blastxml_7-LinearBasicDisplay"
601 }
602 },
603 {
604 "type": "HicTrack",
605 "trackId": "dm3test.cool_9",
606 "name": "dm3test.cool_9",
607 "assemblyNames": [
608 "dm3.fa"
609 ],
610 "displays": [
611 {
612 "type": "LinearHicDisplay",
613 "displayId": "dm3test.cool_9-LinearHicDisplay"
614 }
615 ],
616 "category": [
617 "Assembly properties"
618 ],
619 "adapter": {
620 "type": "HicAdapter",
621 "hicLocation": {
622 "uri": "dm3test.cool_9.hic"
623 }
624 }
625 },
626 {
627 "type": "SyntenyTrack",
628 "trackId": "peach-grape-map.paf_10",
629 "assemblyNames": [
630 "Ppersica1.fa",
631 "Vvinifera1.fa"
632 ],
633 "category": [
634 "Assembly properties"
635 ],
636 "name": "peach-grape-map.paf_10",
637 "displays": [
638 {
639 "type": "LGVSyntenyDisplay",
640 "displayId": "peach-grape-map.paf_10-LGVSyntenyDisplay"
641 },
642 {
643 "type": "DotplotDisplay",
644 "displayId": "peach-grape-map.paf_10-DotplotDisplay"
645 },
646 {
647 "type": "LinearComparativeDisplay",
648 "displayId": "peach-grape-map.paf_10-LinearComparativeDisplay"
649 },
650 {
651 "type": "LinearBasicDisplay",
652 "displayId": "peach-grape-map.paf_10-LinearSyntenyDisplay"
653 }
654 ],
655 "adapter": {
656 "type": "PairwiseIndexedPAFAdapter",
657 "pifGzLocation": {
658 "uri": "peach-grape-map.paf_10"
659 },
660 "assemblyNames": [
661 "Ppersica1.fa",
662 "Vvinifera1.fa"
663 ],
664 "index": {
665 "location": {
666 "uri": "peach-grape-map.paf_10.tbi"
667 }
668 }
669 },
670 "style": {
671 "type": "LGVSyntenyDisplay",
672 "displayId": "peach-grape-map.paf_10-LinearBasicDisplay",
673 "configuration": "peach-grape-map.paf_10-LGVSyntenyDisplay"
674 }
675 },
676 {
677 "type": "SyntenyTrack",
678 "trackId": "arabgrapepeach.paf_11",
679 "assemblyNames": [
680 "Ppersica1.fa",
681 "arabidopsis.URI",
682 "Vvinifera1.URI"
683 ],
684 "category": [
685 "Assembly properties"
686 ],
687 "name": "arabgrapepeach.paf_11",
688 "displays": [
689 {
690 "type": "LGVSyntenyDisplay",
691 "displayId": "arabgrapepeach.paf_11-LGVSyntenyDisplay"
692 },
693 {
694 "type": "DotplotDisplay",
695 "displayId": "arabgrapepeach.paf_11-DotplotDisplay"
696 },
697 {
698 "type": "LinearComparativeDisplay",
699 "displayId": "arabgrapepeach.paf_11-LinearComparativeDisplay"
700 },
701 {
702 "type": "LinearBasicDisplay",
703 "displayId": "arabgrapepeach.paf_11-LinearSyntenyDisplay"
704 }
705 ],
706 "adapter": {
707 "type": "PairwiseIndexedPAFAdapter",
708 "pifGzLocation": {
709 "uri": "arabgrapepeach.paf_11"
710 },
711 "assemblyNames": [
712 "Ppersica1.fa",
713 "arabidopsis.URI",
714 "Vvinifera1.URI"
715 ],
716 "index": {
717 "location": {
718 "uri": "arabgrapepeach.paf_11.tbi"
719 }
720 }
721 },
722 "style": {
723 "type": "LGVSyntenyDisplay",
724 "displayId": "arabgrapepeach.paf_11-LinearBasicDisplay",
725 "configuration": "arabgrapepeach.paf_11-LGVSyntenyDisplay"
726 }
727 },
728 {
729 "type": "SyntenyTrack",
730 "trackId": "arabgrapepeach.paf_12",
731 "assemblyNames": [
732 "Ppersica1.fa",
733 "Vvinifera1.fa"
734 ],
735 "category": [
736 "Assembly properties"
737 ],
738 "name": "arabgrapepeach.paf_12",
739 "displays": [
740 {
741 "type": "LGVSyntenyDisplay",
742 "displayId": "arabgrapepeach.paf_12-LGVSyntenyDisplay"
743 },
744 {
745 "type": "DotplotDisplay",
746 "displayId": "arabgrapepeach.paf_12-DotplotDisplay"
747 },
748 {
749 "type": "LinearComparativeDisplay",
750 "displayId": "arabgrapepeach.paf_12-LinearComparativeDisplay"
751 },
752 {
753 "type": "LinearBasicDisplay",
754 "displayId": "arabgrapepeach.paf_12-LinearSyntenyDisplay"
755 }
756 ],
757 "adapter": {
758 "type": "PairwiseIndexedPAFAdapter",
759 "pifGzLocation": {
760 "uri": "arabgrapepeach.paf_12"
761 },
762 "assemblyNames": [
763 "Ppersica1.fa",
764 "Vvinifera1.fa"
765 ],
766 "index": {
767 "location": {
768 "uri": "arabgrapepeach.paf_12.tbi"
769 }
770 }
771 },
772 "style": {
773 "type": "LGVSyntenyDisplay",
774 "displayId": "arabgrapepeach.paf_12-LinearBasicDisplay",
775 "configuration": "arabgrapepeach.paf_12-LGVSyntenyDisplay"
776 }
777 },
778 {
779 "type": "HicTrack",
780 "trackId": "humanhic_13",
781 "name": "humanhic_13",
782 "assemblyNames": [
783 "hg38"
784 ],
785 "displays": [
786 {
787 "type": "LinearHicDisplay",
788 "displayId": "humanhic_13-LinearHicDisplay"
789 }
790 ],
791 "category": [
792 "Assembly properties"
793 ],
794 "adapter": {
795 "type": "HicAdapter",
796 "hicLocation": {
797 "uri": "https://s3.amazonaws.com/igv.broadinstitute.org/data/hic/intra_nofrag_30.hic"
798 }
799 }
800 }
801 ],
802 "assemblies": [
803 {
804 "name": "Merlin",
805 "sequence": {
806 "type": "ReferenceSequenceTrack",
807 "trackId": "Merlin",
808 "adapter": {
809 "type": "BgzipFastaAdapter",
810 "fastaLocation": {
811 "uri": "Merlin.fa.gz"
812 },
813 "faiLocation": {
814 "uri": "Merlin.fa.gz.fai"
815 },
816 "gziLocation": {
817 "uri": "Merlin.fa.gz.gzi"
818 }
819 }
820 },
821 "displays": [
822 {
823 "type": "LinearReferenceSequenceDisplay",
824 "displayId": "Merlin-LinearReferenceSequenceDisplay"
825 },
826 {
827 "type": "LinearGCContentDisplay",
828 "displayId": "Merlin-LinearGCContentDisplay"
829 }
830 ]
831 },
832 {
833 "name": "dm3.fa",
834 "sequence": {
835 "type": "ReferenceSequenceTrack",
836 "trackId": "dm3.fa",
837 "adapter": {
838 "type": "BgzipFastaAdapter",
839 "fastaLocation": {
840 "uri": "dm3.fa.fa.gz"
841 },
842 "faiLocation": {
843 "uri": "dm3.fa.fa.gz.fai"
844 },
845 "gziLocation": {
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