Mercurial > repos > fubar > jbrowse2
comparison macros.xml @ 5:efc64d8f4b72 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 79e81bef99f582680d9aa4eec88980c675f3fae9
| author | fubar |
|---|---|
| date | Tue, 09 Jan 2024 05:24:48 +0000 |
| parents | 2de9f585505b |
| children | 9a168aa68f06 |
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| 4:54396f0323f4 | 5:efc64d8f4b72 |
|---|---|
| 278 <option value="default_on" selected="true">On when browser opens</option> | 278 <option value="default_on" selected="true">On when browser opens</option> |
| 279 </param> | 279 </param> |
| 280 </xml> | 280 </xml> |
| 281 | 281 |
| 282 <xml name="track_styling_linear"> | 282 <xml name="track_styling_linear"> |
| 283 <param label="Show labels" name="show_labels" type="boolean" checked="true" truevalue="true" falsevalue="false" /> | 283 <param label="Show labels" name="show_labels" type="boolean" checked="false" truevalue="true" falsevalue="false" /> |
| 284 <param label="Show descriptions" name="show_descriptions" type="boolean" checked="true" truevalue="true" falsevalue="false" /> | 284 <param label="Show descriptions" name="show_descriptions" type="boolean" checked="false" truevalue="true" falsevalue="false" /> |
| 285 <param name="display_mode" type="select" label="Display mode"> | 285 <param name="display_mode" type="select" label="Display mode"> |
| 286 <option value="normal" selected="true">normal</option> | 286 <option value="normal" selected="true">normal</option> |
| 287 <option value="compact">compact</option> | 287 <option value="compact">compact</option> |
| 288 <option value="reducedRepresentation">reducedRepresentation</option> | 288 <option value="reducedRepresentation">reducedRepresentation</option> |
| 289 <option value="collapse">collapse</option> | 289 <option value="collapse">collapse</option> |
| 294 <xml name="track_styling_feature"> | 294 <xml name="track_styling_feature"> |
| 295 <section name="jbstyle" title="JBrowse Styling Options [Advanced]" expanded="false"> | 295 <section name="jbstyle" title="JBrowse Styling Options [Advanced]" expanded="false"> |
| 296 <conditional name="track_style"> | 296 <conditional name="track_style"> |
| 297 <param name="display" type="select" label="Display style" help="How the track will be displayed by default"> | 297 <param name="display" type="select" label="Display style" help="How the track will be displayed by default"> |
| 298 <option value="LinearBasicDisplay" selected="true">LinearBasicDisplay</option> | 298 <option value="LinearBasicDisplay" selected="true">LinearBasicDisplay</option> |
| 299 <option value="LinearPileupDisplay">LinearPileupDisplay - good for dense tracks at scale</option> | |
| 299 <option value="LinearArcDisplay">LinearArcDisplay</option> | 300 <option value="LinearArcDisplay">LinearArcDisplay</option> |
| 300 </param> | 301 </param> |
| 302 <when value="LinearPileupDisplay"> | |
| 303 <expand macro="track_styling_linear"/> | |
| 304 </when> | |
| 301 <when value="LinearBasicDisplay"> | 305 <when value="LinearBasicDisplay"> |
| 302 <expand macro="track_styling_linear"/> | 306 <expand macro="track_styling_linear"/> |
| 303 | 307 |
| 304 <!-- examples: https://github.com/GMOD/jbrowse-components/discussions/2729 | 308 <!-- examples: https://github.com/GMOD/jbrowse-components/discussions/2729 |
| 305 and https://github.com/GMOD/jbrowse-components/blob/main/plugins/svg/src/SvgFeatureRenderer/configSchema.ts#L41 --> | 309 and https://github.com/GMOD/jbrowse-components/blob/main/plugins/svg/src/SvgFeatureRenderer/configSchema.ts#L41 --> |