Mercurial > repos > fubar > jbrowse2

diff gff3_rebase.py @ 23:39b717d934a8 draft

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planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit be2268f4c11d54bdd44789dd88dd9017cad27887-dirty
author fubar
date Sat, 03 Feb 2024 10:17:27 +0000
parents bde6b1d09f7d
children b1260bca5fdc
line wrap: on
line diff
--- a/gff3_rebase.py	Thu Feb 01 01:58:58 2024 +0000
+++ b/gff3_rebase.py	Sat Feb 03 10:17:27 2024 +0000
@@ -117,7 +117,7 @@
         start *= 3
         end *= 3
 
-    if parent.location.strand !=None and parent.location.strand >= 0:
+    if parent.location.strand != None and parent.location.strand >= 0:
         ns = parent.location.start + start
         ne = parent.location.start + end
         st = +1
@@ -137,7 +137,7 @@
     if ne < 0:
         ne %= 3
     if ns > ne:
-        ne, ns = ns, ne # dunno why but sometimes happens
+        ne, ns = ns, ne  # dunno why but sometimes happens
     feature.location = FeatureLocation(ns, ne, strand=st)
 
     if hasattr(feature, "sub_features"):