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diff 3.gff @ 121:478ee3e780de draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit a6f013087aa66546a843298e2584604668f9e140
author fubar
date Thu, 03 Oct 2024 06:07:18 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/3.gff	Thu Oct 03 06:07:18 2024 +0000
@@ -0,0 +1,53 @@
+##gff-version 3
+##sequence-region Merlin 1 172788
+Merlin	GeneMark.hmm	gene	10	30	.	+	.	ID=Merlin_1;seqid=Merlin
+Merlin	GeneMark.hmm	mRNA	14	30	.	+	.	ID=Merlin_1_mRNA;Parent=Merlin_1
+Merlin	GeneMark.hmm	CDS	14	20	1000	+	0	ID=Merlin_1_CDS ;Parent=Merlin_1_mRNA
+Merlin	GeneMark.hmm	CDS	24	30	500	+	2	ID=Merlin_1_CDS ;Parent=Merlin_1_mRNA
+Scaffold2	WebApollo	exon	1254745	1254849	.	+	.	ID=401F7E03FCBD10CD78911C045ACBF057;Name=401F7E03FCBD10CD78911C045ACBF057;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1247878	1248122	.	+	.	ID=F2FD3567BB92973E7CC0D266CD9C3002;Name=F2FD3567BB92973E7CC0D266CD9C3002;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1183361	1183513	.	+	.	ID=C602B0741979CD5F41F7092A1E68C46C;Name=C602B0741979CD5F41F7092A1E68C46C;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1190237	1190428	.	+	.	ID=F204CCA66BFB64505E989AB0113F80E0;Name=F204CCA66BFB64505E989AB0113F80E0;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1257900	1257970	.	+	.	ID=8D10D6C74AEB731074328D6231C3711E;Name=8D10D6C74AEB731074328D6231C3711E;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1177308	1177459	.	+	.	ID=FAF84802E1B3BCBF1B34304A8C17E687;Name=FAF84802E1B3BCBF1B34304A8C17E687;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1251226	1251384	.	+	.	ID=AA6625EFFFC93760257BA2AEBD9084F7;Name=AA6625EFFFC93760257BA2AEBD9084F7;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1244244	1244423	.	+	.	ID=A1BAF5141ED123FAF0B13695C3399F67;Name=A1BAF5141ED123FAF0B13695C3399F67;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	non_canonical_five_prime_splice_site	1285352	1285352	.	+	.	ID=41832FDEEC226086FDE25CFA1AADAE2D-non_canonical_five_prive_splice_site-1285351;Name=41832FDEEC226086FDE25CFA1AADAE2D-non_canonical_five_prive_splice_site-1285351;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1199147	1199311	.	+	.	ID=7DCC704132150E28FB9A07E1718D77AC;Name=7DCC704132150E28FB9A07E1718D77AC;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1192019	1192263	.	+	.	ID=5DC0DFF1BACA4A435123BD574A158DC3;Name=5DC0DFF1BACA4A435123BD574A158DC3;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1195224	1195412	.	+	.	ID=C36A537054A80DEE326018CEB3968517;Name=C36A537054A80DEE326018CEB3968517;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1242059	1242253	.	+	.	ID=7C8270DCD43F93327251E91EAADA08DC;Name=7C8270DCD43F93327251E91EAADA08DC;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1285496	1286136	.	+	.	ID=7ECCDA418811FA633C27E1F67B725F2A;Name=7ECCDA418811FA633C27E1F67B725F2A;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1182200	1182500	.	+	.	ID=F01FA790A090E8B667281A115E1C718C;Name=F01FA790A090E8B667281A115E1C718C;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1222068	1222331	.	+	.	ID=DBF6032F0157E014674EB52BB48272DC;Name=DBF6032F0157E014674EB52BB48272DC;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1190549	1190749	.	+	.	ID=AE143CA0766310EB3A1E6BD23BC18AC4;Name=AE143CA0766310EB3A1E6BD23BC18AC4;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1193380	1193494	.	+	.	ID=1B4992B036B6311F3CD929F452223102;Name=1B4992B036B6311F3CD929F452223102;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1178935	1179223	.	+	.	ID=FB017C90C4AC55DB40B0A400A8894AC8;Name=FB017C90C4AC55DB40B0A400A8894AC8;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1256286	1256392	.	+	.	ID=0B1B0926CBD78C731B4494658B82DE45;Name=0B1B0926CBD78C731B4494658B82DE45;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1284968	1285351	.	+	.	ID=CC09682699BA25897F393626C4F02648;Name=CC09682699BA25897F393626C4F02648;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1232464	1232664	.	+	.	ID=80DD9B4F55A6AD0DBE07FA751F127BBA;Name=80DD9B4F55A6AD0DBE07FA751F127BBA;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1188397	1188560	.	+	.	ID=6383AB7C4F065838BC85935D9CFAED76;Name=6383AB7C4F065838BC85935D9CFAED76;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1232111	1232147	.	+	.	ID=E36695555427731CF308F82078FEC9B0;Name=E36695555427731CF308F82078FEC9B0;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1226580	1226846	.	+	.	ID=D58D3E75AE2672A17BEE9302A6E37385;Name=D58D3E75AE2672A17BEE9302A6E37385;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1202550	1202690	.	+	.	ID=C21B321082955BEEF756B7C2C6A5D096;Name=C21B321082955BEEF756B7C2C6A5D096;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1189584	1189771	.	+	.	ID=0C78D78BD6ACF31510F655DE39B71480;Name=0C78D78BD6ACF31510F655DE39B71480;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1218961	1219161	.	+	.	ID=066A45C91A12DACCC0C5EB5B1E4CA123;Name=066A45C91A12DACCC0C5EB5B1E4CA123;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1177543	1177716	.	+	.	ID=F033CCC56F48E2B806E46447EA267060;Name=F033CCC56F48E2B806E46447EA267060;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1266960	1267088	.	+	.	ID=1E54500A43F613F837285D030B0F54C4;Name=1E54500A43F613F837285D030B0F54C4;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1278339	1278592	.	+	.	ID=78EB00577011260745429FB168F0D9C4;Name=78EB00577011260745429FB168F0D9C4;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1193579	1193770	.	+	.	ID=9F48014565E36955074793258E678A51;Name=9F48014565E36955074793258E678A51;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1282265	1282453	.	+	.	ID=4573453BC6A42F32CCDB43AA3956E107;Name=4573453BC6A42F32CCDB43AA3956E107;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	non_canonical_three_prime_splice_site	1285496	1285496	.	+	.	ID=41832FDEEC226086FDE25CFA1AADAE2D-non_canonical_three_prive_splice_site-1285495;Name=41832FDEEC226086FDE25CFA1AADAE2D-non_canonical_three_prive_splice_site-1285495;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1159199	1160031	.	+	.	ID=B547501074442430E7FAF89065AF9AF5;Name=B547501074442430E7FAF89065AF9AF5;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1221344	1221502	.	+	.	ID=165AA5F27B3323F4A45CE39064B070E5;Name=165AA5F27B3323F4A45CE39064B070E5;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1230949	1231157	.	+	.	ID=A83A793CF6675C0372DBDECA8C7332C0;Name=A83A793CF6675C0372DBDECA8C7332C0;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1184667	1184790	.	+	.	ID=32B79C620D7009F3DCC8E946BFB4558A;Name=32B79C620D7009F3DCC8E946BFB4558A;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1187866	1188029	.	+	.	ID=38FD66EE4EC19C037466B82FDA8E9FAD;Name=38FD66EE4EC19C037466B82FDA8E9FAD;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1174871	1175000	.	+	.	ID=F3D5FFA0634EE4DD40C3FB31887BCD57;Name=F3D5FFA0634EE4DD40C3FB31887BCD57;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1270962	1271143	.	+	.	ID=FC53825CEB9A78AA28A8BD7ED2661697;Name=FC53825CEB9A78AA28A8BD7ED2661697;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	CDS	1174871	1175000	.	+	0	ID=43F646FAA11B5075698A73959D6FB383;Name=43F646FAA11B5075698A73959D6FB383;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	gene	1159199	1286136	.	+	.	ID=52F3AF8B2DC566ADAB6A63D796BC8C96;Name=52F3AF8B2DC566ADAB6A63D796BC8C96;owner=kpanfilio;date_last_modified=2014-08-24;date_creation=2014-08-24
+Scaffold2	WebApollo	mRNA	1159199	1286136	.	+	.	ID=41832FDEEC226086FDE25CFA1AADAE2D;Name=spectrin beta chain;Parent=52F3AF8B2DC566ADAB6A63D796BC8C96;Note=Annotation type: Modify an existing gene model,Result of: Merging of two or more gene models.,Result of: Adding an exon to the gene model,Result of: Removing an exon from the gene model,Note to curator: final exon (3' UTR only) interrupted by gap in assembly: rendered as two separate exons with non-canonical splice sites to exclude gap nucleotide positions in excess of the length of the mapped isotig.,Added 5'UTR;Dbxref=GenBank Zootermopsis nevadensis:KDR16227.1;status=Approved;symbol=£]-Spec;owner=kpanfilio;date_creation=2014-08-24;date_last_modified=2014-08-24
+Scaffold2	WebApollo	exon	1250986	1251124	.	+	.	ID=196B75DC18386FCD03A46B68FDACA807;Name=196B75DC18386FCD03A46B68FDACA807;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1200664	1200876	.	+	.	ID=74F95DCA5FF13BA5D9099FC9EDC65062;Name=74F95DCA5FF13BA5D9099FC9EDC65062;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio
+Scaffold2	WebApollo	exon	1199927	1200166	.	+	.	ID=07C567475620CB6A0116E49AD995A468;Name=07C567475620CB6A0116E49AD995A468;Parent=41832FDEEC226086FDE25CFA1AADAE2D;date_last_modified=2014-08-24;date_creation=2014-08-24;owner=kpanfilio