Mercurial > repos > fubar > jbrowse2

diff jbrowse2.py @ 122:ae07c55ab96b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit a9124072bc71dd670ee58ff8e4846e14d6d603ec
author fubar
date Fri, 04 Oct 2024 04:07:03 +0000
parents 478ee3e780de
children 160f33c6ba85
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line diff
--- a/jbrowse2.py	Thu Oct 03 06:07:18 2024 +0000
+++ b/jbrowse2.py	Fri Oct 04 04:07:03 2024 +0000
@@ -21,7 +21,7 @@
 logging.basicConfig(level=logging.DEBUG)
 log = logging.getLogger("jbrowse")
 
-JB2VER = "v2.12.3"
+JB2VER = "v2.15.4"
 # version pinned if cloning - but not cloning now
 logCommands = True
 # useful for seeing what's being written but not for production setups
@@ -1547,7 +1547,7 @@
 
         """
         dest = self.outdir
-        if realclone:
+        if (not os.path.exists(self.jbrowse2path)) or realclone:
             self.subprocess_check_call(
                 ["jbrowse", "create", dest, "-f", "--tag", f"{JB2VER}"]
             )