view x/static/js/3578.058bdae5.chunk.js.map @ 125:49f3d3878413 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5ea1f9c1eef1de76232e69aa6d34cda77d90d566

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null\n      : openLocation(loc, this.pluginManager).readFile('utf8')\n  }\n\n  public async setup(opts?: BaseOptions) {\n    if (!this.setupP) {\n      this.setupP = this.setupPre(opts).catch((e: unknown) => {\n        this.setupP = undefined\n        throw e\n      })\n    }\n    return this.setupP\n  }\n\n  public getFeatures(region: NoAssemblyRegion, opts?: BaseOptions) {\n    const { refName, start, end } = region\n    return ObservableCreate<Feature>(async observer => {\n      const { fasta } = await this.setup(opts)\n      const entry = fasta.get(refName)\n      if (entry) {\n        observer.next(\n          new SimpleFeature({\n            id: `${refName}-${start}-${end}`,\n            data: {\n              refName,\n              start,\n              end,\n              seq: entry.sequence.slice(start, end),\n            },\n          }),\n        )\n      }\n      observer.complete()\n    })\n  }\n\n  public freeResources(/* { region } */): void {}\n}\n"],"names":["UnindexedFastaAdapter","BaseSequenceAdapter","getRefNames","opts","fasta","this","setup","keys","getRegions","entries","map","refName","data","start","end","sequence","length","setupPre","_opts","fastaLocation","getConf","res","text","openLocation","pluginManager","readFile","Map","split","filter","t","test","entryText","defLine","seqLines","id","description","join","replace","val","readConfObject","config","getHeader","loc","uri","setupP","catch","e","undefined","getFeatures","region","ObservableCreate","async","entry","get","observer","next","SimpleFeature","seq","slice","complete","freeResources"],"sourceRoot":""}