view x/static/js/946.245d7df9.chunk.js.map @ 125:49f3d3878413 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5ea1f9c1eef1de76232e69aa6d34cda77d90d566

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'i' : ''}`)\n\n      if (search) {\n        if (searchForward) {\n          const matches = residues.matchAll(re)\n          for (const match of matches) {\n            const s = queryStart + match.index\n            const e = queryStart + match.index + match[0].length\n            if (doesIntersect2(s, e, query.start, query.end)) {\n              observer.next(\n                new SimpleFeature({\n                  uniqueId: `${this.id}-${s}-${match[0]}-pos`,\n                  refName: query.refName,\n                  start: s,\n                  end: e,\n                  name: match[0],\n                  strand: 1,\n                }),\n              )\n            }\n          }\n        }\n        if (searchReverse) {\n          const matches = revcom(residues).matchAll(re)\n          for (const match of matches) {\n            const e = queryEnd - match.index\n            const s = queryEnd - match.index - match[0].length\n            if (doesIntersect2(s, e, query.start, query.end)) {\n              observer.next(\n                new SimpleFeature({\n                  uniqueId: `${this.id}-${s}-${match[0]}-neg`,\n                  refName: query.refName,\n                  start: s,\n                  end: e,\n                  name: match[0],\n                  strand: -1,\n                }),\n              )\n            }\n          }\n        }\n      }\n\n      observer.complete()\n    })\n  }\n\n  public freeResources() {}\n}\n"],"names":["SequenceSearchAdapter","BaseFeatureDataAdapter","configure","adapter","this","getSubAdapter","getConf","Error","dataAdapter","getRefNames","getFeatures","query","opts","ObservableCreate","async","sequenceAdapter","queryEnd","end","queryStart","Math","max","start","observer","complete","ret","feats","firstValueFrom","pipe","toArray","residues","get","search","searchForward","searchReverse","caseInsensitive","re","RegExp","matches","matchAll","match","s","index","e","length","doesIntersect2","next","SimpleFeature","uniqueId","id","refName","name","strand","revcom","freeResources"],"sourceRoot":""}