# HG changeset patch # User fubar # Date 1711601466 0 # Node ID ab0d6782a95fbc897b93cd143d702741a3805a14 # Parent e7a6f7a7148d488eb77fdd7a6a217d632a487580 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 2b6d4a24585beb1ba5055e5d34aacb3b299b1943-dirty diff -r e7a6f7a7148d -r ab0d6782a95f Galaxy-Workflow-_jb2testWF_mar26.ga --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Galaxy-Workflow-_jb2testWF_mar26.ga Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,331 @@ +{ + "a_galaxy_workflow": "true", + "annotation": "", + "comments": [], + "format-version": "0.1", + "name": "'jb2testWF_mar26", + "steps": { + "0": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 0, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "Merlin" + } + ], + "label": "Merlin", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 0 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "60c939a2-b9c9-47cd-9ef4-6415e87a1680", + "when": null, + "workflow_outputs": [] + }, + "1": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 1, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "merlin.bw" + } + ], + "label": "merlin.bw", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 102 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "97251b21-c6c4-4ef9-b985-0cf90f1d2f75", + "when": null, + "workflow_outputs": [] + }, + "2": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 2, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "merlinlastz.maf" + } + ], + "label": "merlinlastz.maf", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 204 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "41961b03-3ea3-4fe4-a45e-85e2f74b8a48", + "when": null, + "workflow_outputs": [] + }, + "3": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 3, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "merlinblast.xml" + } + ], + "label": "merlinblast.xml", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 327 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "544106a0-44ea-40c9-8c55-ff5100110ae2", + "when": null, + "workflow_outputs": [] + }, + "4": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 4, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "merlin-sample.bam" + } + ], + "label": "merlin-sample.bam", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 450 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "42903332-fc6b-4565-b289-22233e6f129a", + "when": null, + "workflow_outputs": [] + }, + "5": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 5, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "merlincram" + } + ], + "label": "merlincram", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 573 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "54692cdf-d0f6-4631-bfbd-8d71e15003a0", + "when": null, + "workflow_outputs": [] + }, + "6": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 6, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "merlin.gff3" + } + ], + "label": "merlin.gff3", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 696 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "a84e95f1-d702-4775-b9e7-abd641122be6", + "when": null, + "workflow_outputs": [] + }, + "7": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 7, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "test-6.bed" + } + ], + "label": "test-6.bed", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 798 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "3306709f-18b5-47b1-86a5-dbf6415254e5", + "when": null, + "workflow_outputs": [] + }, + "8": { + "annotation": "", + "content_id": null, + "errors": null, + "id": 8, + "input_connections": {}, + "inputs": [ + { + "description": "", + "name": "merlin.vcf" + } + ], + "label": "merlin.vcf", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 0, + "top": 900 + }, + "tool_id": null, + "tool_state": "{\"optional\": false, \"tag\": null}", + "tool_version": null, + "type": "data_input", + "uuid": "7f0efd91-8d58-443f-b514-2c9c53ca0074", + "when": null, + "workflow_outputs": [] + }, + "9": { + "annotation": "", + "content_id": "toolshed.g2.bx.psu.edu/repos/fubar/jbrowse2/jbrowse2/2.10.1+galaxy2_7", + "errors": null, + "id": 9, + "input_connections": { + "reference_genome|genome": { + "id": 0, + "output_name": "output" + }, + "track_groups_0|data_tracks_0|data_format|useuri|annotation": { + "id": 1, + "output_name": "output" + }, + "track_groups_0|data_tracks_1|data_format|useuri|annotation": { + "id": 2, + "output_name": "output" + }, + "track_groups_0|data_tracks_2|data_format|useuri|annotation": { + "id": 3, + "output_name": "output" + }, + "track_groups_1|data_tracks_0|data_format|useuri|annotation": { + "id": 4, + "output_name": "output" + }, + "track_groups_1|data_tracks_1|data_format|useuri|annotation": { + "id": 5, + "output_name": "output" + }, + "track_groups_2|data_tracks_0|data_format|useuri|annotation": { + "id": 6, + "output_name": "output" + }, + "track_groups_2|data_tracks_1|data_format|useuri|annotation": { + "id": 7, + "output_name": "output" + }, + "track_groups_2|data_tracks_2|data_format|useuri|annotation": { + "id": 8, + "output_name": "output" + } + }, + "inputs": [ + { + "description": "runtime parameter for tool jbrowse2", + "name": "reference_genome" + } + ], + "label": null, + "name": "jbrowse2", + "outputs": [ + { + "name": "output", + "type": "html" + } + ], + "position": { + "left": 310, + "top": 229 + }, + "post_job_actions": {}, + "tool_id": "toolshed.g2.bx.psu.edu/repos/fubar/jbrowse2/jbrowse2/2.10.1+galaxy2_7", + "tool_shed_repository": { + "changeset_revision": "81d535970196", + "name": "jbrowse2", + "owner": "fubar", + "tool_shed": "toolshed.g2.bx.psu.edu" + }, + "tool_state": "{\"__input_ext\": \"input\", \"__workflow_invocation_uuid__\": \"0275163beb0c11eeb2f5934cf82eac23\", \"chromInfo\": \"/mnt/galaxy/tool-data/shared/ucsc/chrom/?.len\", \"jbgen\": {\"ucol\": {\"formcoll\": \"form\", \"__current_case__\": 1}, \"zipOut\": false, \"defaultLocation\": \"\", \"session_name\": \"New session\", \"enableAnalytics\": false, \"primary_color\": \"#0d233f\", \"secondary_color\": \"#721e63\", \"tertiary_color\": \"#135560\", \"quaternary_color\": \"#ffb11d\", \"font_size\": \"10\"}, \"reference_genome\": {\"genome_type_select\": \"history\", \"__current_case__\": 1, \"genome\": {\"__class__\": \"ConnectedValue\"}}, \"track_groups\": [{\"__index__\": 0, \"category\": \"one\", \"data_tracks\": [{\"__index__\": 0, \"data_format\": {\"data_format_select\": \"bigwig\", \"__current_case__\": 7, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"track_visibility\": \"default_on\"}}, {\"__index__\": 1, \"data_format\": {\"data_format_select\": \"maf\", \"__current_case__\": 6, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"jbstyle\": {\"track_style\": {\"display\": \"LinearBasicDisplay\", \"__current_case__\": 1, \"show_labels\": false, \"show_descriptions\": false, \"display_mode\": \"normal\", \"max_height\": \"600\", \"label\": \"jexl:get(feature,'name') || get(feature,'id')\", \"description\": \"jexl:get(feature,'note') || get(feature,'description')\"}}, \"track_visibility\": \"default_on\"}}, {\"__index__\": 2, \"data_format\": {\"data_format_select\": \"blastxml\", \"__current_case__\": 0, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"blast_parent\": null, \"min_gap\": \"10\", \"is_protein\": false, \"jbstyle\": {\"track_style\": {\"display\": \"LinearBasicDisplay\", \"__current_case__\": 1, \"show_labels\": false, \"show_descriptions\": false, \"display_mode\": \"normal\", \"max_height\": \"600\", \"label\": \"jexl:get(feature,'name') || get(feature,'id')\", \"description\": \"jexl:get(feature,'note') || get(feature,'description')\"}}, \"track_visibility\": \"default_on\"}}]}, {\"__index__\": 1, \"category\": \"two\", \"data_tracks\": [{\"__index__\": 0, \"data_format\": {\"data_format_select\": \"bam\", \"__current_case__\": 3, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"track_visibility\": \"default_on\"}}, {\"__index__\": 1, \"data_format\": {\"data_format_select\": \"cram\", \"__current_case__\": 5, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"track_visibility\": \"default_on\"}}]}, {\"__index__\": 2, \"category\": \"three\", \"data_tracks\": [{\"__index__\": 0, \"data_format\": {\"data_format_select\": \"gff\", \"__current_case__\": 2, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"match_part\": {\"match_part_select\": \"false\", \"__current_case__\": 1}, \"jbstyle\": {\"track_style\": {\"display\": \"LinearBasicDisplay\", \"__current_case__\": 1, \"show_labels\": false, \"show_descriptions\": false, \"display_mode\": \"normal\", \"max_height\": \"600\", \"label\": \"jexl:get(feature,'name') || get(feature,'id')\", \"description\": \"jexl:get(feature,'note') || get(feature,'description')\"}}, \"track_visibility\": \"default_on\"}}, {\"__index__\": 1, \"data_format\": {\"data_format_select\": \"bed\", \"__current_case__\": 4, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"jbstyle\": {\"track_style\": {\"display\": \"LinearBasicDisplay\", \"__current_case__\": 1, \"show_labels\": false, \"show_descriptions\": false, \"display_mode\": \"normal\", \"max_height\": \"600\", \"label\": \"jexl:get(feature,'name') || get(feature,'id')\", \"description\": \"jexl:get(feature,'note') || get(feature,'description')\"}}, \"track_visibility\": \"default_on\"}}, {\"__index__\": 2, \"data_format\": {\"data_format_select\": \"vcf\", \"__current_case__\": 1, \"useuri\": {\"insource\": \"history\", \"__current_case__\": 0, \"annotation\": {\"__class__\": \"ConnectedValue\"}}, \"jbstyle\": {\"track_style\": {\"display\": \"LinearVariantDisplay\", \"__current_case__\": 0, \"show_labels\": false, \"show_descriptions\": false, \"display_mode\": \"normal\", \"max_height\": \"600\"}}, \"track_visibility\": \"default_on\"}}]}], \"uglyTestingHack\": \"\", \"__page__\": null, \"__rerun_remap_job_id__\": null}", + "tool_version": "2.10.1+galaxy2_7", + "type": "tool", + "uuid": "ab05b81c-a0a2-4dcc-b76a-e47b15ebcdb9", + "when": null, + "workflow_outputs": [] + } + }, + "tags": [], + "uuid": "ea921c36-b1bb-4d82-9d35-5965daa3d3b2", + "version": 1 +} \ No newline at end of file diff -r e7a6f7a7148d -r ab0d6782a95f __pycache__/jbrowse2.cpython-310.pyc Binary file __pycache__/jbrowse2.cpython-310.pyc has changed diff -r e7a6f7a7148d -r ab0d6782a95f autogenJB2.py --- a/autogenJB2.py Tue Mar 26 00:52:34 2024 +0000 +++ b/autogenJB2.py Thu Mar 28 04:51:06 2024 +0000 @@ -68,7 +68,8 @@ jc = jbC( outdir=args.outdir, jbrowse2path=args.jbrowse2path, - genomes=[ + ) + genomes=[ { "path": x, "label": genome_names[i], @@ -80,9 +81,8 @@ } for i, x in enumerate(genome_paths) ], - ) - - jc.process_genomes() + logging.warn("#!!! paths=%s, genomes=%s" % (genome_paths, genomes)) + assref_name = jc.process_genomes(genomes[0]) default_session_data = { "visibility": { "default_on": [], @@ -96,7 +96,7 @@ tnames = [x[2] for x in listtracks] texts = [x[1] for x in listtracks] for i, track in enumerate(listtracks): - track_conf = {"trackfiles": [], "category": "autogenerated"} + track_conf = {"trackfiles": [], "category": "autogenerated", "assemblyNames": assref_name} tpath, trext, trackname = track[:3] track_conf["dataset_id"] = trackname useuri = "no" diff -r e7a6f7a7148d -r ab0d6782a95f jbrowse2.py --- a/jbrowse2.py Tue Mar 26 00:52:34 2024 +0000 +++ b/jbrowse2.py Thu Mar 28 04:51:06 2024 +0000 @@ -1,4 +1,4 @@ - #!/usr/bin/env python +#!/usr/bin/env python import argparse import binascii @@ -15,15 +15,15 @@ import xml.etree.ElementTree as ET from collections import defaultdict -logging.basicConfig(level=logging.INFO) +logging.basicConfig(level=logging.DEBUG) log = logging.getLogger("jbrowse") JB2VER = "v2.10.3" # version pinned for cloning TODAY = datetime.datetime.now().strftime("%Y-%m-%d") +SELF_LOCATION = os.path.dirname(os.path.realpath(__file__)) GALAXY_INFRASTRUCTURE_URL = None - mapped_chars = { ">": "__gt__", "<": "__lt__", @@ -341,23 +341,23 @@ if node.findall("metadata"): for (key, value) in node.findall("metadata")[0].attrib.items(): metadata["metadata_%s" % key] = value - # Additional Mappings applied: - metadata[ - "dataset_edam_format" - ] = '{1}'.format( - metadata["dataset_edam_format"], metadata["dataset_file_ext"] - ) - metadata["history_user_email"] = '{0}'.format( - metadata["history_user_email"] - ) - metadata["hist_name"] = metadata["history_display_name"] - metadata[ - "history_display_name" - ] = '{hist_name}'.format( - galaxy=GALAXY_INFRASTRUCTURE_URL, - encoded_hist_id=metadata["history_id"], - hist_name=metadata["history_display_name"], - ) + # Additional Mappings applied: + metadata[ + "dataset_edam_format" + ] = '{1}'.format( + metadata["dataset_edam_format"], metadata["dataset_file_ext"] + ) + metadata["history_user_email"] = '{0}'.format( + metadata["history_user_email"] + ) + metadata["hist_name"] = metadata["history_display_name"] + metadata[ + "history_display_name" + ] = '{hist_name}'.format( + galaxy=GALAXY_INFRASTRUCTURE_URL, + encoded_hist_id=metadata.get("history_id", "not available"), + hist_name=metadata.get("history_display_name", "not available"), + ) if node.findall("tool"): for (key, value) in node.findall("tool")[0].attrib.items(): metadata["tool_%s" % key] = value @@ -373,33 +373,41 @@ class JbrowseConnector(object): - def __init__(self, outdir, jbrowse2path, genomes): + def __init__(self, outdir, jbrowse2path): + self.assemblies = [] # these require more than a few line diff. + self.assmeta = {} self.giURL = GALAXY_INFRASTRUCTURE_URL self.outdir = outdir + self.genome_firstcontig = None self.jbrowse2path = jbrowse2path os.makedirs(self.outdir, exist_ok=True) - self.genome_paths = genomes - self.genome_name = None self.genome_names = [] self.trackIdlist = [] - self.tracksToAdd = [] + self.tracksToAdd = {} self.config_json = {} self.config_json_file = os.path.join(outdir, "config.json") self.clone_jbrowse() - def subprocess_check_call(self, command, output=None): - if output: - log.debug("cd %s && %s > %s", self.outdir, " ".join(command), output) - subprocess.check_call(command, cwd=self.outdir, stdout=output) + def get_cwd(self, cwd): + if cwd: + return self.outdir else: - log.debug("cd %s && %s", self.outdir, " ".join(command)) - subprocess.check_call(command, cwd=self.outdir) + return subprocess.check_output(["pwd"]).decode("utf-8").strip() + # return None - def subprocess_popen(self, command): + def subprocess_check_call(self, command, output=None, cwd=True): + if output: + log.debug("cd %s && %s > %s", self.get_cwd(cwd), " ".join(command), output) + subprocess.check_call(command, cwd=self.get_cwd(cwd), stdout=output) + else: + log.debug("cd %s && %s", self.get_cwd(cwd), " ".join(command)) + subprocess.check_call(command, cwd=self.get_cwd(cwd)) + + def subprocess_popen(self, command, cwd=True): log.debug(command) p = subprocess.Popen( command, - cwd=self.outdir, + cwd=self.get_cwd(cwd), shell=True, stdin=subprocess.PIPE, stdout=subprocess.PIPE, @@ -444,72 +452,72 @@ } return wstyle - def process_genomes(self): - assemblies = [] + def process_genomes(self, genomes): + assembly = [] + assmeta = [] useuri = False - for i, genome_node in enumerate(self.genome_paths): - if genome_node["useuri"].strip().lower() == "yes": + genome_names = [] + for i, genome_node in enumerate(genomes): + this_genome = {} + if genome_node["useuri"] == "yes": useuri = True - genome_name = genome_node["meta"]["dataset_dname"].strip() + genome_name = genome_node["label"].strip() if len(genome_name.split()) > 1: genome_name = genome_name.split()[0] # spaces and cruft break scripts when substituted - if genome_name not in self.genome_names: + if genome_name not in genome_names: # pafs with shared references fapath = genome_node["path"] if not useuri: fapath = os.path.realpath(fapath) assem = self.make_assembly(fapath, genome_name, useuri) - assemblies.append(assem) - self.genome_names.append(genome_name) - if self.genome_name is None: - self.genome_name = ( - genome_name # first one for all tracks - ) - self.genome_sequence_adapter = assem["sequence"]["adapter"] - self.genome_firstcontig = None + assembly.append(assem) + if len(genome_names) == 0: + this_genome["genome_name"] = genome_name # first one for all tracks + genome_names.append(genome_name) + this_genome["genome_sequence_adapter"] = assem["sequence"][ + "adapter" + ] + this_genome["genome_firstcontig"] = None if not useuri: fl = open(fapath, "r").readline() fls = fl.strip().split(">") if len(fls) > 1: fl = fls[1] if len(fl.split()) > 1: - self.genome_firstcontig = fl.split()[0].strip() + this_genome["genome_firstcontig"] = fl.split()[ + 0 + ].strip() else: - self.genome_firstcontig = fl + this_genome["genome_firstcontig"] = fl else: try: fl = urllib.request.urlopen(fapath + ".fai").readline() except: fl = None if fl: # is first row of the text fai so the first contig name - self.genome_firstcontig = ( + this_genome["genome_firstcontig"] = ( fl.decode("utf8").strip().split()[0] ) - else: - self.genome_firstcontig = None + assmeta.append(this_genome) + self.assemblies += assembly + self.assmeta[genome_names[0]] = assmeta + self.tracksToAdd[genome_names[0]] = [] if self.config_json.get("assemblies", None): - self.config_json["assemblies"] += assemblies + self.config_json["assemblies"] += assembly else: - self.config_json["assemblies"] = assemblies + self.config_json["assemblies"] = assembly + self.genome_names += genome_names + return this_genome["genome_name"] def make_assembly(self, fapath, gname, useuri): if useuri: faname = fapath adapter = { "type": "BgzipFastaAdapter", - "fastaLocation": { - "uri": faname, - "locationType": "UriLocation" - }, - "faiLocation": { - "uri": faname + ".fai", - "locationType": "UriLocation" - }, - "gziLocation": { - "uri": faname + ".gzi", - "locationType": "UriLocation" - } + "fastaLocation": {"uri": faname, "locationType": "UriLocation"}, + "faiLocation": {"uri": faname + ".fai", "locationType": "UriLocation"}, + "gziLocation": {"uri": faname + ".gzi", "locationType": "UriLocation"}, } else: faname = gname + ".fa.gz" @@ -532,7 +540,7 @@ }, "gziLocation": { "uri": faname + ".gzi", - } + }, } trackDict = { @@ -551,7 +559,7 @@ "type": "LinearGCContentDisplay", "displayId": "%s-LinearGCContentDisplay" % gname, }, - ] + ], } return trackDict @@ -582,7 +590,7 @@ "jbrowse", "text-index", "--target", - os.path.join(self.outdir, "data"), + self.outdir, "--assemblies", self.genome_name, ] @@ -628,17 +636,14 @@ trackDict = { "type": "HicTrack", "trackId": tId, - "name": trackData["name"], - "assemblyNames": [self.genome_name], + "name": trackData["name"], + "assemblyNames": [trackData["assemblyNames"]], "category": [ categ, ], - "adapter": { - "type": "HicAdapter", - "hicLocation": { "uri": uri } - } + "adapter": {"type": "HicAdapter", "hicLocation": {"uri": uri}}, } - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def add_maf(self, data, trackData): @@ -660,7 +665,7 @@ categ = trackData["category"] fname = "%s" % tId dest = "%s/%s" % (self.outdir, fname) - gname = self.genome_name + gname = trackData["assemblyNames"] cmd = [ "bash", @@ -671,13 +676,16 @@ dest, ] self.subprocess_check_call(cmd) - mafs = open(data,'r').readlines() - mafss = [x for x in mafs if (x.startswith('s\t') or x.startswith('s '))] + mafs = open(data, "r").readlines() + mafss = [x for x in mafs if (x.startswith("s\t") or x.startswith("s "))] samp = [x.split()[1] for x in mafss if len(x.split()) > 0] sampu = list(dict.fromkeys(samp)) - samples = [x.split('.')[0] for x in sampu] + samples = [x.split(".")[0] for x in sampu] samples.sort() - logging.warn("$$$$ cmd=%s, mafss=%s samp=%s samples=%s" % (' '.join(cmd), mafss, samp, samples)) + logging.warn( + "$$$$ cmd=%s, mafss=%s samp=%s samples=%s" + % (" ".join(cmd), mafss, samp, samples) + ) trackDict = { "type": "MafTrack", "trackId": tId, @@ -697,21 +705,18 @@ }, }, }, - "assemblyNames": [self.genome_name], + "assemblyNames": [trackData["assemblyNames"]], "displays": [ { "type": "LinearBasicDisplay", - "displayId": "%s-LinearBasicDisplay" % tId + "displayId": "%s-LinearBasicDisplay" % tId, }, - { - "type": "LinearArcDisplay", - "displayId": "%s-LinearArcDisplay" % tId - }, - ] + {"type": "LinearArcDisplay", "displayId": "%s-LinearArcDisplay" % tId}, + ], } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[gname].append(trackDict) self.trackIdlist.append(tId) if self.config_json.get("plugins", None): self.config_json["plugins"].append(mafPlugin[0]) @@ -732,7 +737,7 @@ ] subprocess.check_call(cmd, cwd=self.outdir, stdout=gff3_unrebased) gff3_unrebased.close() - logging.warn("### blastxml to gff3 cmd = %s" % ' '.join(cmd)) + logging.warn("### blastxml to gff3 cmd = %s" % " ".join(cmd)) return gff3_unrebased.name def add_blastxml(self, data, trackData, blastOpts, **kwargs): @@ -744,7 +749,7 @@ cmd.append("--protein2dna") cmd.extend([os.path.realpath(blastOpts["parent"]), gff3]) subprocess.check_call(cmd, cwd=self.outdir, stdout=gff3_rebased) - logging.warn("### gff3rebase cmd = %s" % ' '.join(cmd)) + logging.warn("### gff3rebase cmd = %s" % " ".join(cmd)) gff3_rebased.close() # Replace original gff3 file shutil.copy(gff3_rebased.name, gff3) @@ -758,7 +763,7 @@ "type": "FeatureTrack", "trackId": tId, "name": trackData["name"], - "assemblyNames": [self.genome_name], + "assemblyNames": [trackData["assemblyNames"]], "category": [ categ, ], @@ -786,7 +791,7 @@ } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) os.unlink(gff3) @@ -810,9 +815,7 @@ "category": [ categ, ], - "assemblyNames": [ - self.genome_name, - ], + "assemblyNames": [trackData["assemblyNames"]], "adapter": { "type": "BigWigAdapter", "bigWigLocation": bwloc, @@ -826,7 +829,7 @@ } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def add_bam(self, data, trackData, bam_index=None, **kwargs): @@ -862,7 +865,7 @@ "category": [ categ, ], - "assemblyNames": [self.genome_name], + "assemblyNames": [trackData["assemblyNames"]], "adapter": { "type": "BamAdapter", "bamLocation": {"uri": url}, @@ -881,13 +884,19 @@ } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def add_cram(self, data, trackData, cram_index=None, **kwargs): tId = trackData["label"] categ = trackData["category"] useuri = trackData["useuri"].lower() == "yes" + gsa = self.assmeta.get(trackData["assemblyNames"], None) + if gsa: + genseqad = gsa[0]["genome_sequence_adapter"] + else: + genseqad = "Not found" + logging.warn("No adapter found for cram %s in gsa=%s" % (tId, gsa)) if useuri: url = data else: @@ -913,14 +922,14 @@ "category": [ categ, ], - "assemblyNames": [self.genome_name], + "assemblyNames": [trackData["assemblyNames"]], "adapter": { "type": "CramAdapter", "cramLocation": {"uri": url}, "craiLocation": { "uri": url + ".crai", }, - "sequenceAdapter": self.genome_sequence_adapter, + "sequenceAdapter": genseqad, }, "displays": [ { @@ -931,7 +940,7 @@ } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def add_vcf(self, data, trackData): @@ -955,7 +964,7 @@ "type": "VariantTrack", "trackId": tId, "name": trackData["name"], - "assemblyNames": [self.genome_name], + "assemblyNames": [trackData["assemblyNames"]], "category": [ categ, ], @@ -985,7 +994,7 @@ } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def _sort_gff(self, data, dest): @@ -1020,7 +1029,7 @@ "type": "FeatureTrack", "trackId": tId, "name": trackData["name"], - "assemblyNames": [self.genome_name], + "assemblyNames": [trackData["assemblyNames"]], "category": [ categ, ], @@ -1048,7 +1057,7 @@ } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def add_bed(self, data, ext, trackData): @@ -1065,7 +1074,7 @@ "type": "FeatureTrack", "trackId": tId, "name": trackData["name"], - "assemblyNames": [self.genome_name], + "assemblyNames": [trackData["assemblyNames"]], "adapter": { "category": [ categ, @@ -1097,17 +1106,24 @@ } style_json = self._prepare_track_style(trackDict) trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def add_paf(self, data, trackData, pafOpts, **kwargs): tname = trackData["name"] tId = trackData["label"] categ = trackData["category"] - pgnames = [x.strip() for x in pafOpts["genome_label"].split(",") if len(x.strip()) > 0] - pgpaths = [x.strip() for x in pafOpts["genome"].split(",") if len(x.strip()) > 0] - passnames = [self.genome_name] # always first - logging.debug("### add_paf got pafOpts=%s, pgnames=%s, pgpaths=%s for %s" % (pafOpts, pgnames, pgpaths, tId)) + pgnames = [ + x.strip() for x in pafOpts["genome_label"].split(",") if len(x.strip()) > 0 + ] + pgpaths = [ + x.strip() for x in pafOpts["genome"].split(",") if len(x.strip()) > 0 + ] + passnames = [trackData["assemblyNames"]] # always first + logging.debug( + "### add_paf got pafOpts=%s, pgnames=%s, pgpaths=%s for %s" + % (pafOpts, pgnames, pgpaths, tId) + ) for i, gname in enumerate(pgnames): if len(gname.split()) > 1: gname = gname.split()[0] @@ -1141,17 +1157,18 @@ "type": "PAFAdapter", "pafLocation": {"uri": url}, "assemblyNames": passnames, - } + }, } style_json = { - "displays": [ - { "type": "LinearBasicDisplay", - "displayId": "%s-LinearBasicyDisplay" % trackDict["trackId"] - } + "displays": [ + { + "type": "LinearBasicDisplay", + "displayId": "%s-LinearBasicyDisplay" % trackDict["trackId"], + } ] } trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) + self.tracksToAdd[trackData["assemblyNames"]].append(trackDict) self.trackIdlist.append(tId) def process_annotations(self, track): @@ -1173,6 +1190,7 @@ "style": {}, } + outputTrackConfig["assemblyNames"] = track["assemblyNames"] outputTrackConfig["key"] = track_human_label outputTrackConfig["useuri"] = useuri outputTrackConfig["path"] = dataset_path @@ -1271,88 +1289,92 @@ .add_default_view() and other configuration code adapted from https://github.com/abretaud/tools-iuc/blob/jbrowse2/tools/jbrowse2/jbrowse2.py """ - tracks_data = [] # TODO using the default session for now, but check out session specs in the future https://github.com/GMOD/jbrowse-components/issues/2708 track_types = {} with open(self.config_json_file, "r") as config_file: config_json = json.load(config_file) if self.config_json: config_json.update(self.config_json) - for track_conf in self.tracksToAdd: - tId = track_conf["trackId"] - track_types[tId] = track_conf["type"] - style_data = default_data["style"].get(tId, None) - if not style_data: - logging.warn("### No style data in default data %s for %s" % (default_data, tId)) - style_data = {"type": "LinearBasicDisplay"} - if "displays" in track_conf: - disp = track_conf["displays"][0]["type"] - style_data["type"] = disp - if track_conf.get("style_labels", None): - # TODO fix this: it should probably go in a renderer block (SvgFeatureRenderer) but still does not work - # TODO move this to per track displays? - style_data["labels"] = track_conf["style_labels"] - tracks_data.append( - { - "type": track_types[tId], - "configuration": tId, - "displays": [style_data], - } - ) - # The view for the assembly we're adding - view_json = {"type": "LinearGenomeView", "tracks": tracks_data} - refName = None - drdict = { - "reversed": False, - "assemblyName": self.genome_name, - "start": 1, - "end": 100000, - "refName": "x", - } + if "defaultSession" in config_json: + session_json = config_json["defaultSession"] + else: + session_json = {} + session_views = [] + for gnome in self.genome_names: + tracks_data = [] + for track_conf in self.tracksToAdd[gnome]: + tId = track_conf["trackId"] + track_types[tId] = track_conf["type"] + style_data = default_data["style"].get(tId, None) + if not style_data: + logging.warn( + "### No style data in default data %s for %s" + % (default_data, tId) + ) + style_data = {"type": "LinearBasicDisplay"} + if "displays" in track_conf: + disp = track_conf["displays"][0]["type"] + style_data["type"] = disp + if track_conf.get("style_labels", None): + # TODO fix this: it should probably go in a renderer block (SvgFeatureRenderer) but still does not work + # TODO move this to per track displays? + style_data["labels"] = track_conf["style_labels"] + tracks_data.append( + { + "type": track_types[tId], + "configuration": tId, + "displays": [style_data], + } + ) + # The view for the assembly we're adding + view_json = {"type": "LinearGenomeView", "tracks": tracks_data} + refName = None + drdict = { + "reversed": False, + "assemblyName": gnome, + "start": 1, + "end": 100000, + "refName": "x", + } - if default_data.get("defaultLocation", ""): - ddl = default_data["defaultLocation"] - loc_match = re.search(r"^([^:]+):([\d,]*)\.*([\d,]*)$", ddl) - # allow commas like 100,000 but ignore as integer - if loc_match: - refName = loc_match.group(1) - drdict["refName"] = refName - if loc_match.group(2) > "": - drdict["start"] = int(loc_match.group(2).replace(",", "")) - if loc_match.group(3) > "": - drdict["end"] = int(loc_match.group(3).replace(",", "")) + if default_data.get("defaultLocation", ""): + ddl = default_data["defaultLocation"] + loc_match = re.search(r"^([^:]+):([\d,]*)\.*([\d,]*)$", ddl) + # allow commas like 100,000 but ignore as integer + if loc_match: + refName = loc_match.group(1) + drdict["refName"] = refName + if loc_match.group(2) > "": + drdict["start"] = int(loc_match.group(2).replace(",", "")) + if loc_match.group(3) > "": + drdict["end"] = int(loc_match.group(3).replace(",", "")) + else: + logging.info( + "@@@ regexp could not match contig:start..end in the supplied location %s - please fix" + % ddl + ) + else: + drdict["refName"] = gnome + if drdict.get("refName", None): + # TODO displayedRegions is not just zooming to the region, it hides the rest of the chromosome + view_json["displayedRegions"] = [ + drdict, + ] + logging.info("@@@ defaultlocation %s for default session" % drdict) else: logging.info( - "@@@ regexp could not match contig:start..end in the supplied location %s - please fix" - % ddl + "@@@ no contig name found for default session - please add one!" ) - else: - drdict["refName"] = self.genome_firstcontig - if drdict.get("refName", None): - # TODO displayedRegions is not just zooming to the region, it hides the rest of the chromosome - view_json["displayedRegions"] = [ - drdict, - ] - - logging.info("@@@ defaultlocation %s for default session" % drdict) - else: - logging.info( - "@@@ no contig name found for default session - please add one!" - ) + session_views.append(view_json) session_name = default_data.get("session_name", "New session") for key, value in mapped_chars.items(): session_name = session_name.replace(value, key) - # Merge with possibly existing defaultSession (if upgrading a jbrowse instance) - session_json = {} - if "defaultSession" in config_json: - session_json = config_json["defaultSession"] - session_json["name"] = session_name if "views" not in session_json: - session_json["views"] = [] - - session_json["views"].append(view_json) + session_json["views"] = session_views + else: + session_json["views"] += session_views config_json["defaultSession"] = session_json self.config_json.update(config_json) @@ -1419,8 +1441,8 @@ def parse_style_conf(item): - if item.text.lower() in ['false','true','yes','no']: - return item.text.lower in ("yes", "true") + if item.text.lower() in ["false", "true", "yes", "no"]: + return item.text.lower in ("yes", "true") else: return item.text @@ -1432,7 +1454,7 @@ "--jbrowse2path", help="Path to JBrowse2 directory in biocontainer or Conda" ) parser.add_argument("--outdir", help="Output directory", default="out") - parser.add_argument("--version", "-V", action="version", version="%(prog)s 2.0.1") + parser.add_argument("--version", "-V", action="version", version=JB2VER) args = parser.parse_args() tree = ET.parse(args.xml) root = tree.getroot() @@ -1444,20 +1466,8 @@ # so we'll prepend `http://` and hope for the best. Requests *should* # be GET and not POST so it should redirect OK GALAXY_INFRASTRUCTURE_URL = "http://" + GALAXY_INFRASTRUCTURE_URL - jc = JbrowseConnector( - outdir=args.outdir, - jbrowse2path=args.jbrowse2path, - genomes=[ - { - "path": x.attrib["path"], - "label": x.attrib["label"], - "useuri": x.attrib["useuri"], - "meta": metadata_from_node(x.find("metadata")), - } - for x in root.findall("metadata/genomes/genome") - ], - ) - jc.process_genomes() + + jc = JbrowseConnector(outdir=args.outdir, jbrowse2path=args.jbrowse2path) default_session_data = { "visibility": { @@ -1468,92 +1478,110 @@ "style_labels": {}, } - for track in root.findall("tracks/track"): - track_conf = {} - track_conf["trackfiles"] = [] + for ass in root.findall("assembly"): + genomes = [ + { + "path": x.attrib["path"], + "label": x.attrib["label"], + "useuri": x.attrib["useuri"], + "meta": metadata_from_node(x.find("metadata")), + } + for x in ass.findall("metadata/genomes/genome") + ] + logging.warn("#!!! genomes=%s" % genomes) + assref_name = jc.process_genomes(genomes) + + for track in ass.find("tracks"): + track_conf = {} + track_conf["trackfiles"] = [] + track_conf["assemblyNames"] = assref_name + is_multi_bigwig = False + try: + if track.find("options/wiggle/multibigwig") and ( + track.find("options/wiggle/multibigwig").text == "True" + ): + is_multi_bigwig = True + multi_bigwig_paths = [] + except KeyError: + pass - is_multi_bigwig = False - try: - if track.find("options/wiggle/multibigwig") and ( - track.find("options/wiggle/multibigwig").text == "True" - ): - is_multi_bigwig = True - multi_bigwig_paths = [] - except KeyError: - pass + trackfiles = track.findall("files/trackFile") + if trackfiles: + for x in track.findall("files/trackFile"): + track_conf["label"] = x.attrib["label"] + trackkey = track_conf["label"] + track_conf["useuri"] = x.attrib["useuri"] + if is_multi_bigwig: + multi_bigwig_paths.append( + ( + x.attrib["label"], + x.attrib["useuri"], + os.path.realpath(x.attrib["path"]), + ) + ) + else: + if trackfiles: + metadata = metadata_from_node(x.find("metadata")) + track_conf["dataset_id"] = metadata.get( + "dataset_id", "None" + ) + if x.attrib["useuri"].lower() == "yes": + tfa = ( + x.attrib["path"], + x.attrib["ext"], + x.attrib["useuri"], + x.attrib["label"], + metadata, + ) + else: + tfa = ( + os.path.realpath(x.attrib["path"]), + x.attrib["ext"], + x.attrib["useuri"], + x.attrib["label"], + metadata, + ) + track_conf["trackfiles"].append(tfa) - trackfiles = track.findall("files/trackFile") - if trackfiles: - for x in track.findall("files/trackFile"): - track_conf["label"] = x.attrib["label"] - trackkey = track_conf["label"] - track_conf["useuri"] = x.attrib["useuri"] if is_multi_bigwig: - multi_bigwig_paths.append( + metadata = metadata_from_node(x.find("metadata")) + + track_conf["trackfiles"].append( ( - x.attrib["label"], - x.attrib["useuri"], - os.path.realpath(x.attrib["path"]), + multi_bigwig_paths, # Passing an array of paths to represent as one track + "bigwig_multiple", + "MultiBigWig", # Giving an hardcoded name for now + {}, # No metadata for multiple bigwig ) ) - else: - if trackfiles: - metadata = metadata_from_node(x.find("metadata")) - track_conf["dataset_id"] = metadata["dataset_id"] - if x.attrib["useuri"].lower() == "yes": - tfa = ( - x.attrib["path"], - x.attrib["ext"], - x.attrib["useuri"], - x.attrib["label"], - metadata, - ) - else: - tfa = ( - os.path.realpath(x.attrib["path"]), - x.attrib["ext"], - x.attrib["useuri"], - x.attrib["label"], - metadata, - ) - track_conf["trackfiles"].append(tfa) - if is_multi_bigwig: - metadata = metadata_from_node(x.find("metadata")) + track_conf["category"] = track.attrib["cat"] + track_conf["format"] = track.attrib["format"] + track_conf["conf"] = etree_to_dict(track.find("options")) + track_conf["category"] = track.attrib["cat"] + track_conf["format"] = track.attrib["format"] + keys = jc.process_annotations(track_conf) - track_conf["trackfiles"].append( - ( - multi_bigwig_paths, # Passing an array of paths to represent as one track - "bigwig_multiple", - "MultiBigWig", # Giving an hardcoded name for now - {}, # No metadata for multiple bigwig - ) - ) - track_conf["category"] = track.attrib["cat"] - track_conf["format"] = track.attrib["format"] - track_conf["conf"] = etree_to_dict(track.find("options")) - track_conf["category"] = track.attrib["cat"] - track_conf["format"] = track.attrib["format"] - keys = jc.process_annotations(track_conf) + if keys: + for key in keys: + vis = track.attrib.get("visibility", "default_off") + if not vis: + vis = "default_off" + default_session_data["visibility"][vis].append(key) + if track.find("options/style"): + default_session_data["style"][key] = { + item.tag: parse_style_conf(item) + for item in track.find("options/style") + } + else: + default_session_data["style"][key] = {} + logging.warn("@@@@ no options/style found for %s" % (key)) - if keys: - for key in keys: - default_session_data["visibility"][ - track.attrib.get("visibility", "default_off") - ].append(key) - if track.find("options/style"): - default_session_data["style"][key] = { - item.tag: parse_style_conf(item) for item in track.find("options/style") - } - else: - default_session_data["style"][key] = {} - logging.warn("@@@@ no options/style found for %s" % (key)) - - if track.find("options/style_labels"): - default_session_data["style_labels"][key] = { - item.tag: parse_style_conf(item) - for item in track.find("options/style_labels") - } + if track.find("options/style_labels"): + default_session_data["style_labels"][key] = { + item.tag: parse_style_conf(item) + for item in track.find("options/style_labels") + } default_session_data["defaultLocation"] = root.find( "metadata/general/defaultLocation" ).text @@ -1571,11 +1599,10 @@ "font_size": root.find("metadata/general/font_size").text, } jc.add_general_configuration(general_data) - trackconf = jc.config_json.get("tracks", None) - if trackconf: - jc.config_json["tracks"].update(jc.tracksToAdd) - else: - jc.config_json["tracks"] = jc.tracksToAdd + trackconf = jc.config_json.get("tracks", []) + for gnome in jc.genome_names: + trackconf += jc.tracksToAdd[gnome] + jc.config_json["tracks"] = trackconf jc.write_config() jc.add_default_session(default_session_data) # jc.text_index() not sure what broke here. diff -r e7a6f7a7148d -r ab0d6782a95f jbrowse2.xml --- a/jbrowse2.xml Tue Mar 26 00:52:34 2024 +0000 +++ b/jbrowse2.xml Thu Mar 28 04:51:06 2024 +0000 @@ -1,4 +1,4 @@ - + genome browser macros.xml @@ -62,62 +62,8 @@ ]]> -#if $jbgen.ucol.formcoll=="form": - - #if str($reference_genome.genome_type_select) == "uri": - - - - - - #else if str($reference_genome.genome_type_select) == "indexed": - - - - - - #else - - - - - #else - user_email="anonymous" - user_id="-1" - display_name="Unnamed History"/> - #end if - - - - - #end if - ${jbgen.defaultLocation} ${jbgen.zipOut} @@ -131,8 +77,73 @@ ${__app__.config.galaxy_infrastructure_url} +#if $jbgen.ucol.formcoll=="form": + #for $assembly in $assemblies: + + + + #if str($assembly.reference_genome.genome_type_select) == "uri": + + + + + + #else if str($assembly.reference_genome.genome_type_select) == "indexed": + + + + + + #else + + + #if $uglyTestingHack != "enabled": + + + #else + user_email="anonymous" + user_id="-1" + display_name="Unnamed History" + #end if + id="${__app__.security.encode_id($assembly.reference_genome.genome.history_id)}" + /> + + + #end if + + + #end if + + + - #for $tg in $track_groups: + #for $tg in $assembly.track_groups: #for $track in $tg.data_tracks: #if $track.data_format.useuri.insource == "uri": @@ -151,6 +162,7 @@ #for $dataset in $track.data_format.useuri.annotation: + #if $uglyTestingHack != "enabled": + #end if #end for #end if #end if + #if $uglyTestingHack != "enabled": #if str($track.data_format.data_format_select) == "bam": @@ -264,26 +278,30 @@ #end if + #end if #end for #end for + + #end for +#end if -#end if ]]> - + - + - + @@ -310,7 +328,7 @@ type="text"> @@ -428,9 +446,8 @@ - + - @@ -442,115 +459,144 @@ - - - - - - - - - - + + + + + + + + + + + + + + + + - - + + - - + + - + - + - - - - - - - - - - + + + + + + + + + + + + + + + + - + - - + + - + - - + + + + + + + + - - + + - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + - - + + - + - - - - - - + + + + + + + + + + + - - - + + + + @@ -563,7 +609,7 @@ - + @@ -770,69 +816,72 @@ - - - - - - - - - - - - - - - -
- - + + + + + + + + + + + + + + + - - + + -
-
- - - - - - - - - - - - - -
- - - - +
+ + + + + + +
+
+ + + + + + + + + + + + + +
+ + + + - - - - - - - + + + + + + + +
+ + + + + + +
-
- - - - - - -
- - + - + @@ -841,6 +890,7 @@ + diff -r e7a6f7a7148d -r ab0d6782a95f jbrowse2broken.py --- a/jbrowse2broken.py Tue Mar 26 00:52:34 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1656 +0,0 @@ -#!/usr/bin/env python -# change to accumulating all configuration for config.json based on the default from the clone -import argparse -import binascii -import datetime -import json -import logging -import os -import re -import shutil -import struct -import subprocess -import tempfile -import urllib.request -import xml.etree.ElementTree as ET -from collections import defaultdict - -logging.basicConfig(level=logging.INFO) -log = logging.getLogger("jbrowse") - -JB2VER = "v2.10.3" -# version pinned for cloning - -TODAY = datetime.datetime.now().strftime("%Y-%m-%d") -GALAXY_INFRASTRUCTURE_URL = None - -# version pinned for cloning - -mapped_chars = { - ">": "__gt__", - "<": "__lt__", - "'": "__sq__", - '"': "__dq__", - "[": "__ob__", - "]": "__cb__", - "{": "__oc__", - "}": "__cc__", - "@": "__at__", - "#": "__pd__", - "": "__cn__", -} - - -class ColorScaling(object): - - COLOR_FUNCTION_TEMPLATE = """ - function(feature, variableName, glyphObject, track) {{ - var score = {score}; - {opacity} - return 'rgba({red}, {green}, {blue}, ' + opacity + ')'; - }} - """ - - COLOR_FUNCTION_TEMPLATE_QUAL = r""" - function(feature, variableName, glyphObject, track) {{ - var search_up = function self(sf, attr){{ - if(sf.get(attr) !== undefined){{ - return sf.get(attr); - }} - if(sf.parent() === undefined) {{ - return; - }}else{{ - return self(sf.parent(), attr); - }} - }}; - - var search_down = function self(sf, attr){{ - if(sf.get(attr) !== undefined){{ - return sf.get(attr); - }} - if(sf.children() === undefined) {{ - return; - }}else{{ - var kids = sf.children(); - for(var child_idx in kids){{ - var x = self(kids[child_idx], attr); - if(x !== undefined){{ - return x; - }} - }} - return; - }} - }}; - - var color = ({user_spec_color} || search_up(feature, 'color') || search_down(feature, 'color') || {auto_gen_color}); - var score = (search_up(feature, 'score') || search_down(feature, 'score')); - {opacity} - if(score === undefined){{ opacity = 1; }} - var result = /^#?([a-f\d]{{2}})([a-f\d]{{2}})([a-f\d]{{2}})$/i.exec(color); - var red = parseInt(result[1], 16); - var green = parseInt(result[2], 16); - var blue = parseInt(result[3], 16); - if(isNaN(opacity) || opacity < 0){{ opacity = 0; }} - return 'rgba(' + red + ',' + green + ',' + blue + ',' + opacity + ')'; - }} - """ - - OPACITY_MATH = { - "linear": """ - var opacity = (score - ({min})) / (({max}) - ({min})); - """, - "logarithmic": """ - var opacity = Math.log10(score - ({min})) / Math.log10(({max}) - ({min})); - """, - "blast": """ - var opacity = 0; - if(score == 0.0) {{ - opacity = 1; - }} else {{ - opacity = (20 - Math.log10(score)) / 180; - }} - """, - } - - BREWER_COLOUR_IDX = 0 - BREWER_COLOUR_SCHEMES = [ - (166, 206, 227), - (31, 120, 180), - (178, 223, 138), - (51, 160, 44), - (251, 154, 153), - (227, 26, 28), - (253, 191, 111), - (255, 127, 0), - (202, 178, 214), - (106, 61, 154), - (255, 255, 153), - (177, 89, 40), - (228, 26, 28), - (55, 126, 184), - (77, 175, 74), - (152, 78, 163), - (255, 127, 0), - ] - - BREWER_DIVERGING_PALLETES = { - "BrBg": ("#543005", "#003c30"), - "PiYg": ("#8e0152", "#276419"), - "PRGn": ("#40004b", "#00441b"), - "PuOr": ("#7f3b08", "#2d004b"), - "RdBu": ("#67001f", "#053061"), - "RdGy": ("#67001f", "#1a1a1a"), - "RdYlBu": ("#a50026", "#313695"), - "RdYlGn": ("#a50026", "#006837"), - "Spectral": ("#9e0142", "#5e4fa2"), - } - - def __init__(self): - self.brewer_colour_idx = 0 - - def rgb_from_hex(self, hexstr): - # http://stackoverflow.com/questions/4296249/how-do-i-convert-a-hex-triplet-to-an-rgb-tuple-and-back - return struct.unpack("BBB", binascii.unhexlify(hexstr)) - - def min_max_gff(self, gff_file): - min_val = None - max_val = None - with open(gff_file, "r") as handle: - for line in handle: - try: - value = float(line.split("\t")[5]) - min_val = min(value, (min_val or value)) - max_val = max(value, (max_val or value)) - - if value < min_val: - min_val = value - - if value > max_val: - max_val = value - except Exception: - pass - return min_val, max_val - - def hex_from_rgb(self, r, g, b): - return "#%02x%02x%02x" % (r, g, b) - - def _get_colours(self): - r, g, b = self.BREWER_COLOUR_SCHEMES[ - self.brewer_colour_idx % len(self.BREWER_COLOUR_SCHEMES) - ] - self.brewer_colour_idx += 1 - return r, g, b - - def parse_menus(self, track): - trackConfig = {"menuTemplate": [{}, {}, {}, {}]} - - if "menu" in track["menus"]: - menu_list = [track["menus"]["menu"]] - if isinstance(track["menus"]["menu"], list): - menu_list = track["menus"]["menu"] - - for m in menu_list: - tpl = { - "action": m["action"], - "label": m.get("label", "{name}"), - "iconClass": m.get("iconClass", "dijitIconBookmark"), - } - if "url" in m: - tpl["url"] = m["url"] - if "content" in m: - tpl["content"] = m["content"] - if "title" in m: - tpl["title"] = m["title"] - - trackConfig["menuTemplate"].append(tpl) - - return trackConfig - - def parse_colours(self, track, trackFormat, gff3=None): - # Wiggle tracks have a bicolor pallete - trackConfig = {"style": {}} - if trackFormat == "wiggle": - - trackConfig["style"]["pos_color"] = track["wiggle"]["color_pos"] - trackConfig["style"]["neg_color"] = track["wiggle"]["color_neg"] - - if trackConfig["style"]["pos_color"] == "__auto__": - trackConfig["style"]["neg_color"] = self.hex_from_rgb( - *self._get_colours() - ) - trackConfig["style"]["pos_color"] = self.hex_from_rgb( - *self._get_colours() - ) - - # Wiggle tracks can change colour at a specified place - bc_pivot = track["wiggle"]["bicolor_pivot"] - if bc_pivot not in ("mean", "zero"): - # The values are either one of those two strings - # or a number - bc_pivot = float(bc_pivot) - trackConfig["bicolor_pivot"] = bc_pivot - elif "scaling" in track: - if track["scaling"]["method"] == "ignore": - if track["scaling"]["scheme"]["color"] != "__auto__": - trackConfig["style"]["color"] = track["scaling"]["scheme"]["color"] - else: - trackConfig["style"]["color"] = self.hex_from_rgb( - *self._get_colours() - ) - else: - # Scored method - algo = track["scaling"]["algo"] - # linear, logarithmic, blast - scales = track["scaling"]["scales"] - # type __auto__, manual (min, max) - scheme = track["scaling"]["scheme"] - # scheme -> (type (opacity), color) - # ================================== - # GENE CALLS OR BLAST - # ================================== - if trackFormat == "blast": - red, green, blue = self._get_colours() - color_function = self.COLOR_FUNCTION_TEMPLATE.format( - **{ - "score": "feature._parent.get('score')", - "opacity": self.OPACITY_MATH["blast"], - "red": red, - "green": green, - "blue": blue, - } - ) - trackConfig["style"]["color"] = color_function.replace("\n", "") - elif trackFormat == "gene_calls": - # Default values, based on GFF3 spec - min_val = 0 - max_val = 1000 - # Get min/max and build a scoring function since JBrowse doesn't - if scales["type"] == "automatic" or scales["type"] == "__auto__": - min_val, max_val = self.min_max_gff(gff3) - else: - min_val = scales.get("min", 0) - max_val = scales.get("max", 1000) - - if scheme["color"] == "__auto__": - user_color = "undefined" - auto_color = "'%s'" % self.hex_from_rgb(*self._get_colours()) - elif scheme["color"].startswith("#"): - user_color = "'%s'" % self.hex_from_rgb( - *self.rgb_from_hex(scheme["color"][1:]) - ) - auto_color = "undefined" - else: - user_color = "undefined" - auto_color = "'%s'" % self.hex_from_rgb(*self._get_colours()) - - color_function = self.COLOR_FUNCTION_TEMPLATE_QUAL.format( - **{ - "opacity": self.OPACITY_MATH[algo].format( - **{"max": max_val, "min": min_val} - ), - "user_spec_color": user_color, - "auto_gen_color": auto_color, - } - ) - - trackConfig["style"]["color"] = color_function.replace("\n", "") - return trackConfig - - -def etree_to_dict(t): - if t is None: - return {} - - d = {t.tag: {} if t.attrib else None} - children = list(t) - if children: - dd = defaultdict(list) - for dc in map(etree_to_dict, children): - for k, v in dc.items(): - dd[k].append(v) - d = {t.tag: {k: v[0] if len(v) == 1 else v for k, v in dd.items()}} - if t.attrib: - d[t.tag].update(("@" + k, v) for k, v in t.attrib.items()) - if t.text: - text = t.text.strip() - if children or t.attrib: - if text: - d[t.tag]["#text"] = text - else: - d[t.tag] = text - return d - - -INSTALLED_TO = os.path.dirname(os.path.realpath(__file__)) - - -def metadata_from_node(node): - metadata = {} - try: - if len(node.findall("dataset")) != 1: - # exit early - return metadata - except Exception: - return {} - - for (key, value) in node.findall("dataset")[0].attrib.items(): - metadata["dataset_%s" % key] = value - - if node.findall("history"): - for (key, value) in node.findall("history")[0].attrib.items(): - metadata["history_%s" % key] = value - - if node.findall("metadata"): - for (key, value) in node.findall("metadata")[0].attrib.items(): - metadata["metadata_%s" % key] = value - # Additional Mappings applied: - metadata[ - "dataset_edam_format" - ] = '{1}'.format( - metadata["dataset_edam_format"], metadata["dataset_file_ext"] - ) - metadata["history_user_email"] = '{0}'.format( - metadata["history_user_email"] - ) - metadata["hist_name"] = metadata["history_display_name"] - metadata[ - "history_display_name" - ] = '{hist_name}'.format( - galaxy=GALAXY_INFRASTRUCTURE_URL, - encoded_hist_id=metadata["history_id"], - hist_name=metadata["history_display_name"], - ) - if node.findall("tool"): - for (key, value) in node.findall("tool")[0].attrib.items(): - metadata["tool_%s" % key] = value - metadata[ - "tool_tool" - ] = '{tool_id}{tool_version}'.format( - galaxy=GALAXY_INFRASTRUCTURE_URL, - encoded_id=metadata.get("dataset_id", ""), - tool_id=metadata.get("tool_tool_id", ""), - tool_version=metadata.get("tool_tool_version", ""), - ) - return metadata - - -class JbrowseConnector(object): - def __init__(self, outdir, jbrowse2path, genomes): - self.giURL = GALAXY_INFRASTRUCTURE_URL - self.outdir = outdir - self.jbrowse2path = jbrowse2path - os.makedirs(self.outdir, exist_ok=True) - self.genome_paths = genomes - self.genome_name = None - self.genome_names = [] - self.trackIdlist = [] - self.tracksToAdd = [] - self.config_json = {} - self.config_json_file = os.path.join(outdir, "config.json") - self.clone_jbrowse() - - def subprocess_check_call(self, command, output=None): - if output: - log.debug("cd %s && %s > %s", self.outdir, " ".join(command), output) - subprocess.check_call(command, cwd=self.outdir, stdout=output) - else: - log.debug("cd %s && %s", self.outdir, " ".join(command)) - subprocess.check_call(command, cwd=self.outdir) - - def subprocess_popen(self, command): - log.debug(command) - p = subprocess.Popen( - command, - cwd=self.outdir, - shell=True, - stdin=subprocess.PIPE, - stdout=subprocess.PIPE, - stderr=subprocess.PIPE, - ) - output, err = p.communicate() - retcode = p.returncode - if retcode != 0: - log.error(command) - log.error(output) - log.error(err) - raise RuntimeError("Command failed with exit code %s" % (retcode)) - - def _prepare_track_style(self, trackDict): - style_data = { - "type": "LinearBasicDisplay", - "displayId": "%s-LinearBasicDisplay" % trackDict["trackId"], - } - - if trackDict.get("displays", None): # use first if multiple like bed - style_data["type"] = trackDict["displays"][0]["type"] - style_data["displayId"] = trackDict["displays"][0]["displayId"] - return { - "displays": [ - style_data, - ] - } - - def subprocess_check_output(self, command): - log.debug(" ".join(command)) - return subprocess.check_output(command, cwd=self.outdir) - - def symlink_or_copy(self, src, dest): - if "GALAXY_JBROWSE_SYMLINKS" in os.environ and bool( - os.environ["GALAXY_JBROWSE_SYMLINKS"] - ): - cmd = ["ln", "-s", src, dest] - else: - cmd = ["cp", src, dest] - - return self.subprocess_check_call(cmd) - - def process_genomes(self): - assemblies = [] - useuri = False - for i, genome_node in enumerate(self.genome_paths): - if genome_node["useuri"].strip().lower() == "yes": - useuri = True - genome_name = genome_node["meta"]["dataset_dname"].strip() - if len(genome_name.split()) > 1: - genome_name = genome_name.split()[0] - # spaces and cruft break scripts when substituted - if genome_name not in self.genome_names: - # ignore dupes - can have multiple pafs with same references? - fapath = genome_node["path"] - if not useuri: - fapath = os.path.realpath(fapath) - assem = self.make_assembly(fapath, genome_name, useuri) - assemblies.append(assem) - self.genome_names.append(genome_name) - if self.genome_name is None: - self.genome_name = ( - genome_name # first one for all tracks - other than paf - ) - self.genome_sequence_adapter = assem["sequence"]["adapter"] - self.genome_firstcontig = None - if not useuri: - fl = open(fapath, "r").readline() - fls = fl.strip().split(">") - if len(fls) > 1: - fl = fls[1] - if len(fl.split()) > 1: - self.genome_firstcontig = fl.split()[0].strip() - else: - self.genome_firstcontig = fl - else: - fl = urllib.request.urlopen(fapath + ".fai").readline() - if fl: # is first row of the text fai so the first contig name - self.genome_firstcontig = ( - fl.decode("utf8").strip().split()[0] - ) - if self.config_json.get("assemblies", None): - self.config_json["assemblies"] += assemblies - else: - self.config_json["assemblies"] = assemblies - - def make_assembly(self, fapath, gname, useuri): - if useuri: - faname = fapath - adapter = { - "type": "BgzipFastaAdapter", - "fastaLocation": { - "uri": faname, - "locationType": "UriLocation", - }, - "faiLocation": { - "uri": faname + ".fai", - "locationType": "UriLocation", - }, - "gziLocation": { - "uri": faname + ".gzi", - "locationType": "UriLocation", - }, - } - else: - faname = gname + ".fa.gz" - fadest = os.path.realpath(os.path.join(self.outdir, faname)) - cmd = "bgzip -i -c %s -I %s.gzi > %s && samtools faidx %s" % ( - fapath, - fadest, - fadest, - fadest, - ) - self.subprocess_popen(cmd) - - adapter = { - "type": "BgzipFastaAdapter", - "fastaLocation": { - "uri": faname, - }, - "faiLocation": { - "uri": faname + ".fai", - }, - "gziLocation": { - "uri": faname + ".gzi", - }, - } - - trackDict = { - "name": gname, - "sequence": { - "type": "ReferenceSequenceTrack", - "trackId": gname, - "adapter": adapter, - }, - "displays": [ - { - "type": "LinearReferenceSequenceDisplay", - "displayId": "%s-LinearReferenceSequenceDisplay" % gname, - }, - { - "type": "LinearGCContentDisplay", - "displayId": "%s-LinearGCContentDisplay" % gname, - }, - ], - } - return trackDict - - def add_default_view(self): - cmd = [ - "jbrowse", - "set-default-session", - "-s", - self.config_json_file, - "-t", - ",".join(self.trackIdlist), - "-n", - "JBrowse2 in Galaxy", - "--target", - self.config_json_file, - "-v", - " LinearGenomeView", - ] - self.subprocess_check_call(cmd) - - def write_config(self): - with open(self.config_json_file, "w") as fp: - json.dump(self.config_json, fp, indent=2) - - def text_index(self): - # Index tracks - args = [ - "jbrowse", - "text-index", - "--target", - os.path.join(self.outdir, "data"), - "--assemblies", - self.genome_name, - ] - - tracks = ",".join(self.trackIdlist) - if tracks: - args += ["--tracks", tracks] - - self.subprocess_check_call(args) - - def add_hic(self, data, trackData): - """ - HiC adapter. - https://github.com/aidenlab/hic-format/blob/master/HiCFormatV9.md - for testing locally, these work: - HiC data is from https://s3.amazonaws.com/igv.broadinstitute.org/data/hic/intra_nofrag_30.hic - using hg19 reference track as a - 'BgzipFastaAdapter' - fastaLocation: - uri: 'https://s3.amazonaws.com/jbrowse.org/genomes/GRCh38/fasta/GRCh38.fa.gz', - faiLocation: - uri: 'https://s3.amazonaws.com/jbrowse.org/genomes/GRCh38/fasta/GRCh38.fa.gz.fai', - gziLocation: - uri: 'https://s3.amazonaws.com/jbrowse.org/genomes/GRCh38/fasta/GRCh38.fa.gz.gzi', - Cool will not be likely to be a good fit - see discussion at https://github.com/GMOD/jbrowse-components/issues/2438 - """ - tId = trackData["label"] - # can be served - if public. - # dsId = trackData["metadata"]["dataset_id"] - # url = "%s/api/datasets/%s/display?to_ext=hic " % (self.giURL, dsId) - useuri = trackData["useuri"].lower() == "yes" - if useuri: - uri = data - else: - uri = trackData["hic_url"] - categ = trackData["category"] - trackDict = { - "type": "HicTrack", - "trackId": tId, - "name": uri, - "assemblyNames": [self.genome_name], - "category": [ - categ, - ], - "adapter": { - "type": "HicAdapter", - "hicLocation": uri, - }, - "displays": [ - { - "type": "LinearHicDisplay", - "displayId": "%s-LinearHicDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def add_maf(self, data, trackData): - """ - from https://github.com/cmdcolin/maf2bed - Note: Both formats start with a MAF as input, and note that your MAF file should contain the species name and chromosome name - e.g. hg38.chr1 in the sequence identifiers. - need the reference id - eg hg18, for maf2bed.pl as the first parameter - """ - tId = trackData["label"] - mafPlugin = { - "plugins": [ - { - "name": "MafViewer", - "url": "https://unpkg.com/jbrowse-plugin-mafviewer/dist/jbrowse-plugin-mafviewer.umd.production.min.js", - } - ] - } - categ = trackData["category"] - fname = "%s.bed" % tId - dest = "%s/%s" % (self.outdir, fname) - gname = self.genome_name - cmd = [ - "bash", - os.path.join(INSTALLED_TO, "convertMAF.sh"), - data, - gname, - INSTALLED_TO, - dest, - ] - self.subprocess_check_call(cmd) - # Construct samples list - # We could get this from galaxy metadata, not sure how easily. - ps = subprocess.Popen(["grep", "^s [^ ]*", "-o", data], stdout=subprocess.PIPE) - output = subprocess.check_output(("sort", "-u"), stdin=ps.stdout) - ps.wait() - outp = output.decode("ascii") - soutp = outp.split("\n") - samp = [x.split("s ")[1] for x in soutp if x.startswith("s ")] - samples = [x.split(".")[0] for x in samp] - trackDict = { - "type": "MafTrack", - "trackId": tId, - "name": trackData["name"], - "category": [ - categ, - ], - "adapter": { - "type": "MafTabixAdapter", - "samples": samples, - "bedGzLocation": { - "uri": fname + ".sorted.bed.gz", - }, - "index": { - "location": { - "uri": fname + ".sorted.bed.gz.tbi", - }, - }, - }, - "assemblyNames": [self.genome_name], - "displays": [ - { - "type": "LinearBasicDisplay", - "displayId": "%s-LinearBasicDisplay" % tId, - }, - { - "type": "LinearArcDisplay", - "displayId": "%s-LinearArcDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - if self.config_json.get("plugins", None): - self.config_json["plugins"].append(mafPlugin[0]) - else: - self.config_json.update(mafPlugin) - - def _blastxml_to_gff3(self, xml, min_gap=10): - gff3_unrebased = tempfile.NamedTemporaryFile(delete=False) - cmd = [ - "python", - os.path.join(INSTALLED_TO, "blastxml_to_gapped_gff3.py"), - "--trim", - "--trim_end", - "--include_seq", - "--min_gap", - str(min_gap), - xml, - ] - subprocess.check_call(cmd, cwd=self.outdir, stdout=gff3_unrebased) - gff3_unrebased.close() - return gff3_unrebased.name - - def add_blastxml(self, data, trackData, blastOpts, **kwargs): - gff3 = self._blastxml_to_gff3(data, min_gap=blastOpts["min_gap"]) - - if "parent" in blastOpts and blastOpts["parent"] != "None": - gff3_rebased = tempfile.NamedTemporaryFile(delete=False) - cmd = ["python", os.path.join(INSTALLED_TO, "gff3_rebase.py")] - if blastOpts.get("protein", "false") == "true": - cmd.append("--protein2dna") - cmd.extend([os.path.realpath(blastOpts["parent"]), gff3]) - subprocess.check_call(cmd, cwd=self.outdir, stdout=gff3_rebased) - gff3_rebased.close() - - # Replace original gff3 file - shutil.copy(gff3_rebased.name, gff3) - os.unlink(gff3_rebased.name) - url = "%s.gff3" % trackData["label"] - dest = "%s/%s" % (self.outdir, url) - self._sort_gff(gff3, dest) - url = url + ".gz" - tId = trackData["label"] - categ = trackData["category"] - trackDict = { - "type": "FeatureTrack", - "trackId": tId, - "name": trackData["name"], - "assemblyNames": [self.genome_name], - "category": [ - categ, - ], - "adapter": { - "type": "Gff3TabixAdapter", - "gffGzLocation": { - "uri": url, - }, - "index": { - "location": { - "uri": url + ".tbi", - } - }, - }, - "displays": [ - { - "type": "LinearBasicDisplay", - "displayId": "%s-LinearBasicDisplay" % tId, - }, - { - "type": "LinearArcDisplay", - "displayId": "%s-LinearArcDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - os.unlink(gff3) - - def add_bigwig(self, data, trackData): - """ "type": "LinearWiggleDisplay", - "configuration": {}, - "selectedRendering": "", - "resolution": 1, - "posColor": "rgb(228, 26, 28)", - "negColor": "rgb(255, 255, 51)", - "constraints": {} - """ - useuri = trackData["useuri"].lower() == "yes" - if useuri: - url = data - else: - url = "%s.bigwig" % trackData["label"] - # slashes in names cause path trouble - dest = os.path.join(self.outdir, url) - cmd = ["cp", data, dest] - self.subprocess_check_call(cmd) - bwloc = {"uri": url} - tId = trackData["label"] - categ = trackData["category"] - trackDict = { - "type": "QuantitativeTrack", - "trackId": tId, - "name": trackData["name"], - "category": [ - categ, - ], - "assemblyNames": [ - self.genome_name, - ], - "adapter": { - "type": "BigWigAdapter", - "bigWigLocation": bwloc, - }, - "displays": [ - { - "type": "LinearWiggleDisplay", - "displayId": "%s-LinearWiggleDisplay" % tId, - } - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def add_bam(self, data, trackData, bam_index=None, **kwargs): - tId = trackData["label"] - useuri = trackData["useuri"].lower() == "yes" - bindex = bam_index - categ = trackData["category"] - if useuri: - url = data - else: - fname = "%s.bam" % trackData["label"] - dest = "%s/%s" % (self.outdir, fname) - url = fname - bindex = fname + ".bai" - self.subprocess_check_call(["cp", data, dest]) - if bam_index is not None and os.path.exists(bam_index): - if not os.path.exists(bindex): - # bai most probably made by galaxy and stored in galaxy dirs, need to copy it to dest - self.subprocess_check_call(["cp", bam_index, bindex]) - else: - # Can happen in exotic condition - # e.g. if bam imported as symlink with datatype=unsorted.bam, then datatype changed to bam - # => no index generated by galaxy, but there might be one next to the symlink target - # this trick allows to skip the bam sorting made by galaxy if already done outside - if os.path.exists(os.path.realpath(data) + ".bai"): - self.symlink_or_copy(os.path.realpath(data) + ".bai", bindex) - else: - log.warn("Could not find a bam index (.bai file) for %s", data) - trackDict = { - "type": "AlignmentsTrack", - "trackId": tId, - "name": trackData["name"], - "category": [ - categ, - ], - "assemblyNames": [self.genome_name], - "adapter": { - "type": "BamAdapter", - "bamLocation": {"uri": url}, - "index": { - "location": { - "uri": bindex, - } - }, - }, - "displays": [ - { - "type": "LinearAlignmentsDisplay", - "displayId": "%s-LinearAlignmentsDisplay" % tId, - } - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def add_cram(self, data, trackData, cram_index=None, **kwargs): - tId = trackData["label"] - categ = trackData["category"] - useuri = trackData["useuri"].lower() == "yes" - if useuri: - url = data - else: - fname = "%s.cram" % trackData["label"] - dest = "%s/%s" % (self.outdir, fname) - url = fname - self.subprocess_check_call(["cp", data, dest]) - if cram_index is not None and os.path.exists(cram_index): - if not os.path.exists(dest + ".crai"): - # most probably made by galaxy and stored in galaxy dirs, need to copy it to dest - self.subprocess_check_call( - ["cp", os.path.realpath(cram_index), dest + ".crai"] - ) - else: - cpath = os.path.realpath(dest) + ".crai" - cmd = ["samtools", "index", "-c", "-o", cpath, os.path.realpath(dest)] - logging.debug("executing cmd %s" % " ".join(cmd)) - self.subprocess_check_call(cmd) - trackDict = { - "type": "AlignmentsTrack", - "trackId": tId, - "name": trackData["name"], - "category": [ - categ, - ], - "assemblyNames": [self.genome_name], - "adapter": { - "type": "CramAdapter", - "cramLocation": {"uri": url}, - "craiLocation": { - "uri": url + ".crai", - }, - "sequenceAdapter": self.genome_sequence_adapter, - }, - "displays": [ - { - "type": "LinearAlignmentsDisplay", - "displayId": "%s-LinearAlignmentsDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def add_vcf(self, data, trackData): - tId = trackData["label"] - # url = "%s/api/datasets/%s/display" % ( - # self.giURL, - # trackData["metadata"]["dataset_id"], - # ) - categ = trackData["category"] - useuri = trackData["useuri"].lower() == "yes" - if useuri: - url = data - else: - url = "%s.vcf.gz" % tId - dest = "%s/%s" % (self.outdir, url) - cmd = "bgzip -c %s > %s" % (data, dest) - self.subprocess_popen(cmd) - cmd = ["tabix", "-f", "-p", "vcf", dest] - self.subprocess_check_call(cmd) - trackDict = { - "type": "VariantTrack", - "trackId": tId, - "name": trackData["name"], - "assemblyNames": [self.genome_name], - "category": [ - categ, - ], - "adapter": { - "type": "VcfTabixAdapter", - "vcfGzLocation": {"uri": url}, - "index": { - "location": { - "uri": url + ".tbi", - } - }, - }, - "displays": [ - { - "type": "LinearVariantDisplay", - "displayId": "%s-LinearVariantDisplay" % tId, - }, - { - "type": "ChordVariantDisplay", - "displayId": "%s-ChordVariantDisplay" % tId, - }, - { - "type": "LinearPairedArcDisplay", - "displayId": "%s-LinearPairedArcDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def _sort_gff(self, data, dest): - # Only index if not already done - if not os.path.exists(dest): - cmd = "jbrowse sort-gff '%s' | bgzip -c > '%s'" % ( - data, - dest, - ) # "gff3sort.pl --precise '%s' | grep -v \"^$\" > '%s'" - self.subprocess_popen(cmd) - self.subprocess_check_call(["tabix", "-f", "-p", "gff", dest]) - - def _sort_bed(self, data, dest): - # Only index if not already done - if not os.path.exists(dest): - cmd = "sort -k1,1 -k2,2n '%s' | bgzip -c > '%s'" % (data, dest) - self.subprocess_popen(cmd) - cmd = ["tabix", "-f", "-p", "bed", dest] - self.subprocess_check_call(cmd) - - def add_gff(self, data, ext, trackData): - useuri = trackData["useuri"].lower() == "yes" - if useuri: - url = trackData["path"] - else: - url = "%s.%s.gz" % (trackData["label"], ext) - dest = "%s/%s" % (self.outdir, url) - self._sort_gff(data, dest) - tId = trackData["label"] - categ = trackData["category"] - trackDict = { - "type": "FeatureTrack", - "trackId": tId, - "name": trackData["name"], - "assemblyNames": [self.genome_name], - "category": [ - categ, - ], - "adapter": { - "type": "Gff3TabixAdapter", - "gffGzLocation": { - "uri": url, - }, - "index": { - "location": { - "uri": url + ".tbi", - } - }, - }, - "displays": [ - { - "type": "LinearBasicDisplay", - "displayId": "%s-LinearBasicDisplay" % tId, - }, - { - "type": "LinearArcDisplay", - "displayId": "%s-LinearArcDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def add_bed(self, data, ext, trackData): - tId = trackData["label"] - categ = trackData["category"] - useuri = trackData["useuri"].lower() == "yes" - if useuri: - url = data - else: - url = "%s.%s.gz" % (trackData["label"], ext) - dest = "%s/%s" % (self.outdir, url) - self._sort_bed(data, dest) - trackDict = { - "type": "FeatureTrack", - "trackId": tId, - "name": trackData["name"], - "assemblyNames": [self.genome_name], - "adapter": { - "category": [ - categ, - ], - "type": "BedTabixAdapter", - "bedGzLocation": { - "uri": url, - }, - "index": { - "location": { - "uri": url + ".tbi", - } - }, - }, - "displays": [ - { - "type": "LinearBasicDisplay", - "displayId": "%s-LinearBasicDisplay" % tId, - }, - { - "type": "LinearPileupDisplay", - "displayId": "%s-LinearPileupDisplay" % tId, - }, - { - "type": "LinearArcDisplay", - "displayId": "%s-LinearArcDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def add_paf(self, data, trackData, pafOpts, **kwargs): - tname = trackData["name"] - tId = trackData["label"] - categ = trackData["category"] - pgnames = [x.strip() for x in pafOpts["genome_label"].split(",")] - pgpaths = [x.strip() for x in pafOpts["genome"].split(",")] - passnames = [self.genome_name] # always first - for i, gname in enumerate(pgnames): - if len(gname.split()) > 1: - gname = gname.split()[0] - passnames.append(gname) - # trouble from spacey names in command lines avoidance - if gname not in self.genome_names: - # ignore if already there - eg for duplicates among pafs. - useuri = pgpaths[i].startswith("http://") or pgpaths[i].startswith( - "https://" - ) - asstrack = self.make_assembly(pgpaths[i], gname, useuri) - self.genome_names.append(gname) - if self.config_json.get("assemblies", None): - self.config_json["assemblies"].append(asstrack) - else: - self.config_json["assemblies"] = [ - asstrack, - ] - url = "%s.paf" % (trackData["label"]) - dest = "%s/%s" % (self.outdir, url) - self.symlink_or_copy(os.path.realpath(data), dest) - trackDict = { - "type": "SyntenyTrack", - "trackId": tId, - "assemblyNames": passnames, - "category": [ - categ, - ], - "name": tname, - "adapter": { - "type": "PAFAdapter", - "pafLocation": {"uri": url}, - "assemblyNames": passnames, - }, - "displays": [ - { - "type": "LinearSyntenyDisplay", - "displayId": "%s-LinearSyntenyDisplay" % tId, - }, - { - "type": "DotPlotDisplay", - "displayId": "%s-DotPlotDisplay" % tId, - }, - ], - } - style_json = self._prepare_track_style(trackDict) - trackDict["style"] = style_json - self.tracksToAdd.append(trackDict) - self.trackIdlist.append(tId) - - def process_annotations(self, track): - category = track["category"].replace("__pd__date__pd__", TODAY) - for i, ( - dataset_path, - dataset_ext, - useuri, - track_human_label, - extra_metadata, - ) in enumerate(track["trackfiles"]): - if not dataset_path.strip().startswith("http"): - # Unsanitize labels (element_identifiers are always sanitized by Galaxy) - for key, value in mapped_chars.items(): - track_human_label = track_human_label.replace(value, key) - track_human_label = track_human_label.replace(" ", "_") - outputTrackConfig = { - "category": category, - "style": track["style"], - } - - outputTrackConfig["label"] = "%s_%i_%s" % ( - dataset_ext, - i, - track_human_label, - ) - outputTrackConfig["useuri"] = useuri - outputTrackConfig["path"] = dataset_path - outputTrackConfig["ext"] = dataset_ext - outputTrackConfig["key"] = track_human_label - - outputTrackConfig["trackset"] = track.get("trackset", {}) - outputTrackConfig["metadata"] = extra_metadata - outputTrackConfig["name"] = track_human_label - - if dataset_ext in ("gff", "gff3"): - self.add_gff( - dataset_path, - dataset_ext, - outputTrackConfig, - ) - elif dataset_ext in ("hic", "juicebox_hic"): - self.add_hic( - dataset_path, - outputTrackConfig, - ) - elif dataset_ext in ("cool", "mcool", "scool"): - hic_url = "%s_%d.juicebox_hic" % (track_human_label, i) - hic_path = os.path.join(self.outdir, hic_url) - self.subprocess_check_call( - [ - "hictk", - "convert", - "-f", - "--output-fmt", - "hic", - dataset_path, - hic_path, - ] - ) - outputTrackConfig["hic_url"] = hic_url - self.add_hic( - hic_path, - outputTrackConfig, - ) - elif dataset_ext in ("bed",): - self.add_bed( - dataset_path, - dataset_ext, - outputTrackConfig, - ) - elif dataset_ext in ("maf",): - self.add_maf( - dataset_path, - outputTrackConfig, - ) - elif dataset_ext == "bigwig": - self.add_bigwig( - dataset_path, - outputTrackConfig, - ) - elif dataset_ext == "bam": - real_indexes = track["conf"]["options"]["bam"]["bam_index"] - self.add_bam( - dataset_path, - outputTrackConfig, - bam_index=real_indexes, - ) - elif dataset_ext == "cram": - real_indexes = track["conf"]["options"]["cram"]["cram_index"] - self.add_cram( - dataset_path, - outputTrackConfig, - cram_index=real_indexes, - ) - elif dataset_ext == "blastxml": - self.add_blastxml( - dataset_path, - outputTrackConfig, - track["conf"]["options"]["blast"], - ) - elif dataset_ext == "vcf": - self.add_vcf(dataset_path, outputTrackConfig) - elif dataset_ext == "paf": - self.add_paf( - dataset_path, - outputTrackConfig, - track["conf"]["options"]["paf"], - ) - else: - logging.warn("Do not know how to handle %s", dataset_ext) - # Return non-human label for use in other fields - yield outputTrackConfig["label"] - - def add_default_session(self, default_data): - """ - Add some default session settings: set some assemblies/tracks on/off - - labels off 1 - { - "id": "JJNRSOoj8cPCTR8ZJ7Yne", - "type": "VariantTrack", - "configuration": "vcf_0_merlin.vcf", - "minimized": false, - "displays": [ - { - "id": "JOvAkv1bdyz5SAJs3JBby", - "type": "LinearVariantDisplay", - "configuration": {}, - "trackShowLabels": false, - "trackShowDescriptions": false - } - ] - }, - - track labels at end of default view - "hideHeader": false, - "hideHeaderOverview": false, - "hideNoTracksActive": false, - "trackSelectorType": "hierarchical", - "showCenterLine": false, - "showCytobandsSetting": true, - "trackLabels": "hidden", - "showGridlines": true, - "showBookmarkHighlights": true, - "showBookmarkLabels": true - } - ], - "sessionTracks": [], - "sessionAssemblies": [], - "temporaryAssemblies": [], - "connectionInstances": [], - "sessionConnections": [], - "focusedViewId": "n-7YuEPiR5QUtHntU-xcO", - "sessionPlugins": [] - } - } - - - """ - tracks_data = [] - - # TODO using the default session for now, but check out session specs in the future https://github.com/GMOD/jbrowse-components/issues/2708 - - # We need to know the track type from the config.json generated just before - track_types = {} - with open(self.config_json_file, "r") as config_file: - config_json = json.load(config_file) - if self.config_json: - config_json.update(self.config_json) - - for track_conf in self.tracksToAdd: - tId = track_conf["trackId"] - track_types[tId] = track_conf["type"] - style_data = default_data["style"][tId] - logging.warn( - "### defsession for %s got style_data=%s given default_data %s" - % (tId, style_data, default_data) - ) - if "displays" in track_conf: - disp = track_conf["displays"][0]["type"] - style_data["type"] = disp - - style_data["configuration"] = "%s-%s" % (tId, disp) - if track_conf.get("style_labels", None): - # TODO fix this: it should probably go in a renderer block (SvgFeatureRenderer) but still does not work - # TODO move this to per track displays? - style_data["labels"] = track_conf["style_labels"] - tracks_data.append( - { - "type": track_types[tId], - "configuration": tId, - "displays": [style_data], - } - ) - - # The view for the assembly we're adding - view_json = {"type": "LinearGenomeView", "tracks": tracks_data} - - refName = None - drdict = { - "reversed": False, - "assemblyName": self.genome_name, - "start": 1, - "end": 200000, - "refName": "x", - } - - if default_data.get("defaultLocation", ""): - ddl = default_data["defaultLocation"] - loc_match = re.search(r"^([^:]+):([\d,]*)\.*([\d,]*)$", ddl) - # allow commas like 100,000 but ignore as integer - if loc_match: - refName = loc_match.group(1) - drdict["refName"] = refName - if loc_match.group(2) > "": - drdict["start"] = int(loc_match.group(2).replace(",", "")) - if loc_match.group(3) > "": - drdict["end"] = int(loc_match.group(3).replace(",", "")) - else: - logging.info( - "@@@ regexp could not match contig:start..end in the supplied location %s - please fix" - % ddl - ) - else: - drdict["refName"] = self.genome_firstcontig - if drdict.get("refName", None): - # TODO displayedRegions is not just zooming to the region, it hides the rest of the chromosome - view_json["displayedRegions"] = [ - drdict, - ] - - logging.info("@@@ defaultlocation %s for default session" % drdict) - else: - logging.info( - "@@@ no contig name found for default session - please add one!" - ) - session_name = default_data.get("session_name", "New session") - for key, value in mapped_chars.items(): - session_name = session_name.replace(value, key) - # Merge with possibly existing defaultSession (if upgrading a jbrowse instance) - session_json = {} - if "defaultSession" in config_json: - session_json = config_json["defaultSession"] - - session_json["name"] = session_name - - if "views" not in session_json: - session_json["views"] = [] - - session_json["views"].append(view_json) - - config_json["defaultSession"] = session_json - self.config_json.update(config_json) - - with open(self.config_json_file, "w") as config_file: - json.dump(self.config_json, config_file, indent=2) - - def add_general_configuration(self, data): - """ - Add some general configuration to the config.json file - """ - - config_path = self.config_json_file - if os.path.exists(config_path): - with open(config_path, "r") as config_file: - config_json = json.load(config_file) - else: - config_json = {} - if self.config_json: - config_json.update(self.config_json) - config_data = {} - - config_data["disableAnalytics"] = data.get("analytics", "false") == "true" - - config_data["theme"] = { - "palette": { - "primary": {"main": data.get("primary_color", "#0D233F")}, - "secondary": {"main": data.get("secondary_color", "#721E63")}, - "tertiary": {"main": data.get("tertiary_color", "#135560")}, - "quaternary": {"main": data.get("quaternary_color", "#FFB11D")}, - }, - "typography": {"fontSize": int(data.get("font_size", 10))}, - } - if not config_json.get("configuration", None): - config_json["configuration"] = {} - config_json["configuration"].update(config_data) - self.config_json.update(config_json) - with open(config_path, "w") as config_file: - json.dump(self.config_json, config_file, indent=2) - - def clone_jbrowse(self, realclone=True): - """Clone a JBrowse directory into a destination directory. This also works in Biocontainer testing now""" - dest = self.outdir - if realclone: - self.subprocess_check_call( - ["jbrowse", "create", dest, "-f", "--tag", f"{JB2VER}"] - ) - else: - shutil.copytree(self.jbrowse2path, dest, dirs_exist_ok=True) - for fn in [ - "asset-manifest.json", - "favicon.ico", - "robots.txt", - "umd_plugin.js", - "version.txt", - "test_data", - ]: - cmd = ["rm", "-rf", os.path.join(dest, fn)] - self.subprocess_check_call(cmd) - cmd = ["cp", os.path.join(INSTALLED_TO, "jb2_webserver.py"), dest] - self.subprocess_check_call(cmd) - - -def parse_style_conf(item): - if "type" in item.attrib and item.attrib["type"] in [ - "boolean", - "integer", - ]: - if item.attrib["type"] == "boolean": - return item.text in ("yes", "true", "True") - elif item.attrib["type"] == "integer": - return int(item.text) - else: - return item.text - - -if __name__ == "__main__": - parser = argparse.ArgumentParser(description="", epilog="") - parser.add_argument("--xml", help="Track Configuration") - parser.add_argument( - "--jbrowse2path", help="Path to JBrowse2 directory in biocontainer or Conda" - ) - parser.add_argument("--outdir", help="Output directory", default="out") - parser.add_argument("--version", "-V", action="version", version="%(prog)s 2.0.1") - args = parser.parse_args() - tree = ET.parse(args.xml) - root = tree.getroot() - - # This should be done ASAP - GALAXY_INFRASTRUCTURE_URL = root.find("metadata/galaxyUrl").text - # Sometimes this comes as `localhost` without a protocol - if not GALAXY_INFRASTRUCTURE_URL.startswith("http"): - # so we'll prepend `http://` and hope for the best. Requests *should* - # be GET and not POST so it should redirect OK - GALAXY_INFRASTRUCTURE_URL = "http://" + GALAXY_INFRASTRUCTURE_URL - jc = JbrowseConnector( - outdir=args.outdir, - jbrowse2path=args.jbrowse2path, - genomes=[ - { - "path": x.attrib["path"], - "label": x.attrib["label"], - "useuri": x.attrib["useuri"], - "meta": metadata_from_node(x.find("metadata")), - } - for x in root.findall("metadata/genomes/genome") - ], - ) - jc.process_genomes() - - # .add_default_view() replace from https://github.com/abretaud/tools-iuc/blob/jbrowse2/tools/jbrowse2/jbrowse2.py - default_session_data = { - "visibility": { - "default_on": [], - "default_off": [], - }, - "style": {}, - "style_labels": {}, - } - for track in root.findall("tracks/track"): - track_conf = {} - track_conf["trackfiles"] = [] - - is_multi_bigwig = False - try: - if track.find("options/wiggle/multibigwig") and ( - track.find("options/wiggle/multibigwig").text == "True" - ): - is_multi_bigwig = True - multi_bigwig_paths = [] - except KeyError: - pass - - trackfiles = track.findall("files/trackFile") - if trackfiles: - for x in track.findall("files/trackFile"): - track_conf["label"] = x.attrib["label"] - track_conf["useuri"] = x.attrib["useuri"] - if is_multi_bigwig: - multi_bigwig_paths.append( - ( - x.attrib["label"], - x.attrib["useuri"], - os.path.realpath(x.attrib["path"]), - ) - ) - else: - if trackfiles: - metadata = metadata_from_node(x.find("metadata")) - track_conf["dataset_id"] = metadata["dataset_id"] - if x.attrib["useuri"].lower() == "yes": - tfa = ( - x.attrib["path"], - x.attrib["ext"], - x.attrib["useuri"], - x.attrib["label"], - metadata, - ) - else: - tfa = ( - os.path.realpath(x.attrib["path"]), - x.attrib["ext"], - x.attrib["useuri"], - x.attrib["label"], - metadata, - ) - track_conf["trackfiles"].append(tfa) - - if is_multi_bigwig: - metadata = metadata_from_node(x.find("metadata")) - - track_conf["trackfiles"].append( - ( - multi_bigwig_paths, # Passing an array of paths to represent as one track - "bigwig_multiple", - "MultiBigWig", # Giving an hardcoded name for now - {}, # No metadata for multiple bigwig - ) - ) - track_conf["category"] = track.attrib["cat"] - track_conf["format"] = track.attrib["format"] - if track.find("options/style"): - track_conf["style"] = { - item.tag: parse_style_conf(item) for item in track.find("options/style") - } - else: - track_conf["style"] = {} - tst = track_conf["style"].get("type", None) - if tst: - track_conf["style"]["configuration"] = "%s-%s" % (track_conf["label"], tst) - logging.warn("### got %s for track style" % track_conf["style"]) - if track.find("options/style_labels"): - track_conf["style_labels"] = { - item.tag: parse_style_conf(item) - for item in track.find("options/style_labels") - } - track_conf["conf"] = etree_to_dict(track.find("options")) - track_conf["category"] = track.attrib["cat"] - track_conf["format"] = track.attrib["format"] - keys = jc.process_annotations(track_conf) - - if keys: - for key in keys: - default_session_data["visibility"][ - track.attrib.get("visibility", "default_off") - ].append(key) - if track_conf.get("style", None): - default_session_data["style"][key] = track_conf["style"] - if track_conf.get("style_labels", None): - default_session_data["style_labels"][key] = track_conf.get( - "style_labels", None - ) - logging.warn( - "# after process, key=%s def session style = %s" - % (key, default_session_data["style"][key]) - ) - default_session_data["defaultLocation"] = root.find( - "metadata/general/defaultLocation" - ).text - default_session_data["session_name"] = root.find( - "metadata/general/session_name" - ).text - jc.zipOut = root.find("metadata/general/zipOut").text == "true" - general_data = { - "analytics": root.find("metadata/general/analytics").text, - "primary_color": root.find("metadata/general/primary_color").text, - "secondary_color": root.find("metadata/general/secondary_color").text, - "tertiary_color": root.find("metadata/general/tertiary_color").text, - "quaternary_color": root.find("metadata/general/quaternary_color").text, - "font_size": root.find("metadata/general/font_size").text, - } - jc.add_general_configuration(general_data) - trackconf = jc.config_json.get("tracks", None) - if trackconf: - jc.config_json["tracks"].update(jc.tracksToAdd) - else: - jc.config_json["tracks"] = jc.tracksToAdd - jc.write_config() - jc.add_default_session(default_session_data) - logging.warn("### got default_session_data=%s" % default_session_data) - # jc.text_index() not sure what broke here. diff -r e7a6f7a7148d -r ab0d6782a95f jbrowse2broken.xml --- a/jbrowse2broken.xml Tue Mar 26 00:52:34 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,961 +0,0 @@ - - genome browser - - macros.xml - - - - jbrowse2 - - - python '${__tool_directory__}/jbrowse2.py' --version - 0: - --pafmeta '$pafs[0]' - #set refs = [($pafs[0][2],$subCol[x],x) for x in $subCol.keys() if $subCol[x].ext == 'fasta'] - #for $ref in $refs: - --pafreferencemeta '$ref' - #end for - #end if - #else if $autoCollection[$key].ext == 'fasta': - --referencemeta '$autoCollection[$key],$autoCollection[$key].ext,$key' - #else if $autoCollection[$key].ext in ['bed', 'bigwig', 'cool', 'gff', 'gff3', 'hic', 'maf', 'mcool', 'scool', 'vcf'] - --trackmeta '$autoCollection[$key],$autoCollection[$key].ext,$key' - #else if $autoCollection[$key].ext in ['bam',] - --trackmeta '$autoCollection[$key],$autoCollection[$key].ext,$key,$autoCollection[$key].metadata.bam_index' - #else if $autoCollection[$key].ext in ['cram',] - --trackmeta '$autoCollection[$key],$autoCollection[$key].ext,$key,$autoCollection[$key].metadata.cram_index' - #end if - #end for - --outdir '$output.files_path' - --jbrowse2path \${JBROWSE2_PATH} - --sessName "Autogen JBrowse" && - #if $jbgen.zipOut == "true": - (cd '$output.files_path' && zip -r - . ) > '$output' - #else - cp '$output.files_path/index.html' '$output' - #end if -#else: - python '$__tool_directory__/jbrowse2.py' - --jbrowse2path \${JBROWSE2_PATH} - --outdir '$output.files_path' - --xml '$trackxml' && - #if $jbgen.zipOut == "true": - (cd '$output.files_path' && zip -r - . ) > '$output' - #else - cp '$output.files_path/index.html' '$output' - #end if - ## Ugly testing hack since I cannot get to test the files I want to test. Hmph. - #if str($uglyTestingHack) == "enabled": - && cp '$trackxml' '$output' - #end if -#end if - ]]> - - -#if $jbgen.ucol.formcoll=="form": - - - - #if str($reference_genome.genome_type_select) == "uri": - - - - - - #else if str($reference_genome.genome_type_select) == "indexed": - - - - - - #else - - - - - #else - user_email="anonymous" - user_id="-1" - display_name="Unnamed History"/> - #end if - - - - - #end if - - - ${jbgen.defaultLocation} - ${jbgen.zipOut} - ${jbgen.enableAnalytics} - ${jbgen.primary_color} - ${jbgen.secondary_color} - ${jbgen.tertiary_color} - ${jbgen.quaternary_color} - ${jbgen.font_size} - ${jbgen.session_name} - - ${__app__.config.galaxy_infrastructure_url} - - - #for $tg in $track_groups: - #for $track in $tg.data_tracks: - #if $track.data_format.useuri.insource == "uri": - - - - - - - - - - - #else if $track.data_format.useuri.insource == "history": - #if $track.data_format.useuri.annotation: - - - #for $dataset in $track.data_format.useuri.annotation: - - - - - - #else - user_email="anonymous" - user_id="-1" - display_name="Unnamed History"/> - #end if - - - - - - #end for - - - - - #if str($track.data_format.data_format_select) == "bam": - - #for $dataset in $track.data_format.useuri.annotation: - ${dataset.metadata.bam_index} - #end for - - #else if str($track.data_format.data_format_select) == "cram": - - #for $dataset in $track.data_format.useuri.annotation: - ${dataset.metadata.cram_index} - #end for - - #else if str($track.data_format.data_format_select) == "blastxml": - - #if str($track.data_format.blast_parent) != "": - ${track.data_format.blast_parent} - #end if - ${track.data_format.is_protein} - ${track.data_format.min_gap} - - #else if str($track.data_format.data_format_select) == "gff": - - #if $track.data_format.match_part.match_part_select == "true": - ${track.data_format.match_part.name} - #end if - - #else if str($track.data_format.data_format_select) == "paf": - - - #for gnome in $track.data_format.synteny_genome: - $gnome, - #end for - - - #for gnome in $track.data_format.synteny_genome: - $gnome.name, - #end for - - - #else if str($track.data_format.data_format_select) == "hic": - - - #else if str($track.data_format.data_format_select) == "cool": - - - #else if str($track.data_format.data_format_select) == "bed": - - - #else if str($track.data_format.data_format_select) == "sparql": - - - ${track.data_format.url} - ${track.data_format.query} - ${track.data_format.query_refnames} - - #end if - - - #end if - #end if - #end for - #end for - - -#end if -]]> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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- - - - - - - - - - - - - - - - - - - - diff -r e7a6f7a7148d -r ab0d6782a95f macros.xml --- a/macros.xml Tue Mar 26 00:52:34 2024 +0000 +++ b/macros.xml Thu Mar 28 04:51:06 2024 +0000 @@ -138,6 +138,7 @@ +
@@ -372,7 +373,10 @@ + + + @@ -380,6 +384,8 @@ + +
@@ -389,10 +395,12 @@ + + @@ -430,6 +438,7 @@ +
diff -r e7a6f7a7148d -r ab0d6782a95f macrosbroken.xml --- a/macrosbroken.xml Tue Mar 26 00:52:34 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,548 +0,0 @@ - - - 2.10.1 - - - topic_3307 - topic_0092 - - - operation_0573 - operation_0564 - - - - - jbrowse2 - biopython - bcbio-gff - samtools - pyyaml - tabix - findutils - hictk - - - - \$GALAXY_JBROWSE_SHARED_DIR - galaxy2 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 10.1186/s13059-016-0924-1 - 10.1101/gr.094607.109 - - - diff -r e7a6f7a7148d -r ab0d6782a95f test-data/blastxml/blast-gene1.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blastxml/blast-gene1.xml Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,126 @@ + + + + blastp + BLASTP 2.2.28+ + Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. + /usr/local/syncdb/community/nr/nr + Query_1 + Merlin_1 + 229 + + + BLOSUM62 + 0.001 + 11 + 1 + F + + + + + 1 + Query_1 + Merlin_1 + 229 + + + 1 + gi|422934611|ref|YP_007004572.1| + hypothetical protein [Enterobacteria phage ime09] >gi|339791394|gb|AEK12451.1| hypothetical protein [Enterobacteria phage ime09] + YP_007004572 + 685 + + + 1 + 197.593 + 501 + 3.74548e-55 + 2 + 229 + 474 + 684 + 0 + 0 + 106 + 154 + 21 + 230 + LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR + LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK + L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+ + + + + + 2 + gi|330858714|ref|YP_004415089.1| + hypothetical protein Shfl2p198 [Shigella phage Shfl2] >gi|327397648|gb|AEA73150.1| hypothetical protein Shfl2p198 [Shigella phage Shfl2] + YP_004415089 + 685 + + + 1 + 197.593 + 501 + 4.31042e-55 + 2 + 229 + 474 + 684 + 0 + 0 + 106 + 154 + 21 + 230 + LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR + LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK + L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+ + + + + + 3 + gi|228861509|ref|YP_002854530.1| + alt.-2 hypothetical protein [Enterobacteria phage RB14] >gi|227438525|gb|ACP30838.1| alt.-2 hypothetical protein [Enterobacteria phage RB14] + YP_002854530 + 685 + + + 1 + 197.593 + 501 + 4.35388e-55 + 2 + 229 + 474 + 684 + 0 + 0 + 108 + 152 + 21 + 230 + LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR + LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGS-----------HSTYANEDAETSVGMVIKGAERVKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYFMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK + L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ T N + ++G VI GAE V+VIVPG L+ +P EAEVILPRG LLKINK++T K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+ + + + + + + + 48094830 + 17186091396 + 143 + 886533640716 + 0.041 + 0.267 + 0.14 + + + + + + diff -r e7a6f7a7148d -r ab0d6782a95f test-data/blastxml/blast.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blastxml/blast.xml Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,2862 @@ + + + + blastp + BLASTP 2.2.28+ + Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. + /usr/local/syncdb/community/nr/nr + Query_1 + Merlin_1 + 229 + + + BLOSUM62 + 0.001 + 11 + 1 + F + + + + + 1 + Query_1 + Merlin_1 + 229 + + + 1 + gi|422934611|ref|YP_007004572.1| + hypothetical protein [Enterobacteria phage ime09] >gi|339791394|gb|AEK12451.1| hypothetical protein [Enterobacteria phage ime09] + YP_007004572 + 685 + + + 1 + 197.593 + 501 + 3.74548e-55 + 2 + 229 + 474 + 684 + 0 + 0 + 106 + 154 + 21 + 230 + LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR + LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK + L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+ + + + + + 2 + gi|330858714|ref|YP_004415089.1| + hypothetical protein Shfl2p198 [Shigella phage Shfl2] >gi|327397648|gb|AEA73150.1| hypothetical protein Shfl2p198 [Shigella phage Shfl2] + YP_004415089 + 685 + + + 1 + 197.593 + 501 + 4.31042e-55 + 2 + 229 + 474 + 684 + 0 + 0 + 106 + 154 + 21 + 230 + LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR + LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK + L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+ + + + + + 3 + gi|228861509|ref|YP_002854530.1| + alt.-2 hypothetical protein [Enterobacteria phage RB14] >gi|227438525|gb|ACP30838.1| alt.-2 hypothetical protein [Enterobacteria phage RB14] + YP_002854530 + 685 + + + 1 + 197.593 + 501 + 4.35388e-55 + 2 + 229 + 474 + 684 + 0 + 0 + 108 + 152 + 21 + 230 + LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR + LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGS-----------HSTYANEDAETSVGMVIKGAERVKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYFMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK + L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ T N + ++G VI GAE V+VIVPG L+ +P EAEVILPRG LLKINK++T K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+ + + + + + + + 48094830 + 17186091396 + 143 + 886533640716 + 0.041 + 0.267 + 0.14 + + + + + 2 + Query_2 + Merlin_2 + 95 + + + 1 + gi|308814559|ref|YP_003934833.1| + hypothetical protein SP18_gp210 [Shigella phage SP18] >gi|308206151|gb|ADO19550.1| hypothetical protein SP18gp210 [Shigella phage SP18] + YP_003934833 + 107 + + + 1 + 79.337 + 194 + 9.23754e-17 + 1 + 95 + 12 + 107 + 0 + 0 + 42 + 56 + 1 + 96 + MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKENVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFRK + MKSSFRFNGQELVVENVIPASEEFDSAVGNELRRVFGEDKKFDLRPVENFVNSEQTENIFNGVVTGQLESEAPIAITVFAKKEVVMTAAGFISFRK + MKS FR NG E+VVE+V+P S EF+ V EL+++ G DKK P+ F E + VVTGQLE E +A+ EV++T F+ FRK + + + + + 2 + gi|456351278|ref|YP_007501230.1| + hypothetical protein [Salmonella phage S16] >gi|448913695|gb|AGE48199.1| hypothetical protein [Salmonella phage S16] + YP_007501230 + 106 + + + 1 + 77.7962 + 190 + 2.9568e-16 + 1 + 94 + 11 + 106 + 0 + 0 + 42 + 57 + 2 + 96 + MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKE-NVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFR + MKSILRIASTEIVIENAKPDSREFNEAAYELLQELYGTDKNFQLHPLPRFGVKEGQADNYISGVLSGNLVGEVPCAISIIAEDNQISNVVGFVVFR + MKSI RI EIV+E+ P S EFNE ++ L+++ G DK Q P+ RFG+KE D YI V++G L GE A+ + D I + FV+FR + + + + + 3 + gi|408387127|gb|AFU64136.1| + hypothetical protein [Salmonella phage STML-198] + AFU64136 + 96 + + + 1 + 77.0258 + 188 + 5.19436e-16 + 1 + 94 + 1 + 96 + 0 + 0 + 42 + 57 + 2 + 96 + MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKE-NVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFR + MKSILRIASTETVIENVKPDSREFNEAAYELLQELYGTDKNFQLHPLPRFGVKEGQADNYISGVLSGNLVGEVPCAISIIAEDNQISNVVGFVVFR + MKSI RI E V+E+V P S EFNE ++ L+++ G DK Q P+ RFG+KE D YI V++G L GE A+ + D I + FV+FR + + + + + 4 + gi|314121774|ref|YP_004063893.1| + Alt.-3 conserved hypothetical protein [Enterobacteria phage vB_EcoM-VR7] >gi|313151531|gb|ADR32587.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage vB_EcoM-VR7] + YP_004063893 + 96 + + + 1 + 76.6406 + 187 + 7.7684e-16 + 1 + 95 + 1 + 96 + 0 + 0 + 40 + 56 + 1 + 96 + MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKENVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFRK + MKSSFRFNGQELVVENVIPASEEFDSAVGNELRRVFGEDKKFDLRPVENFVNSEQTENIFNGIVTGQLESEAPIAITVFVKKEAVMTVAGFISFRK + MKS FR NG E+VVE+V+P S EF+ V EL+++ G DKK P+ F E + +VTGQLE E +A+ E ++T+ F+ FRK + + + + + 5 + gi|161622625|ref|YP_001595321.1| + Alt.-3 conserved hypothetical protein [Enterobacteria phage JS98] >gi|52139951|gb|AAU29321.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage JS98] + YP_001595321 + 96 + + + 1 + 75.485 + 184 + 2.41009e-15 + 1 + 95 + 1 + 96 + 0 + 0 + 39 + 55 + 1 + 96 + MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKENVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFRK + MKSAFRFNGQELVVENVIPASEEFDSAVGNELRRVFGEDKQFDLRPIENFSQPEQTENIFNGVVTGQLESEAPISITVFVKKQPLMTAAGFISFRK + MKS FR NG E+VVE+V+P S EF+ V EL+++ G DK+ PI F E + VVTGQLE E +++ + ++T F+ FRK + + + + + + + 48094830 + 17186091396 + 65 + 421797823380 + 0.041 + 0.267 + 0.14 + + + + + 3 + Query_3 + Merlin_3 + 314 + + + 1 + gi|456351277|ref|YP_007501229.1| + baseplate subunit [Salmonella phage S16] >gi|347466342|gb|AEO97128.1| baseplate subunit [Salmonella phage S16] >gi|408387126|gb|AFU64135.1| tail assembly [Salmonella phage STML-198] + YP_007501229 + 305 + + + 1 + 573.548 + 1477 + 0 + 1 + 302 + 1 + 302 + 0 + 0 + 266 + 289 + 0 + 302 + MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVIN + MYTLDEFKNQAANIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTQGLTNIITSGTRDLTRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLIDFFNMVYPQSGLMIYSVKIPENRLSHEMDFMHNSPNIKITGRDLEPLTVSFRMDPEASNYRAMQDWVNAVQDPVTGLRALPTDVEADIQVNLHARNGIPHTVIMFTGCIPISCGAPELTYEGDNQIAVFDVTFAYRVMQAGAVGRQAAIDWLEDKTVDSIDKINPDLSLNGSLSRLSRLGGAGGGISNIVN + M TLDEFKNQA NIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFT GLT+IIT+GT+ L RKSGVSKYLIGAMSNRVVQSLLGEFEVGTYL+DFFNM YPQSGLMIYSVKIPENRLSHEMDF HNSPNI+ITGR+L+PLT+SFRMDPEASNYRAMQDWVN+VQDPVTGLRALPTDVEADIQVNLHARNG+PHTVIMFTGC+P++CGAPELTYEGDNQIAVFDVTFAYRVMQ GAVGRQAA+DW+ED+ V+SI IN ++SLNGSLSRLSRLGGA GG+S+++N + + + + + 2 + gi|311993189|ref|YP_004010055.1| + gp54 base plate tail tube initiator [Enterobacteria phage CC31] >gi|284178027|gb|ADB81693.1| gp54 base plate tail tube initiator [Enterobacteria phage CC31] + YP_004010055 + 320 + + + 1 + 539.265 + 1388 + 0 + 1 + 314 + 1 + 320 + 0 + 0 + 258 + 286 + 6 + 320 + MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINST------RNSTSKILGL + MLNLDEFNNQVMNVDFQRTNMFSCVFATSPSAKSQLLLDQFGGMLYNNLPVSGDWLGLSQGEFTQGLTSIITAGTQELVRKSGVSKYLIGAMTNRVVQSLLGEFEVGTYLLDFFNMAFPTSGLMIYSAKIPDNRLSHETDWLHNSPNIRITGRELEPLTLSFRMDSEASNWRAMQDWVNSVQDPVTGLRALPVDVEADIQVNLHARNGLPHTVCMFTGCVPVSCGSPEFTWDGDNQIAVFDVQFAYRVMQVGAVGRQAAADWVEDRLVHAIGNISDDMGLDSSLSRLSRLGGAAGGITQMGNAIGRKTGMWNSTSKILGL + ML LDEF NQ N+DFQRTNMFSCVFAT+PSAKSQ LLDQFGGML+NNLP++ DWLGL+QGEFT GLTSIITAGTQ+LVRKSGVSKYLIGAM+NRVVQSLLGEFEVGTYLLDFFNMA+P SGLMIYS KIP+NRLSHE D+ HNSPNIRITGREL+PLT+SFRMD EASN+RAMQDWVNSVQDPVTGLRALP DVEADIQVNLHARNGLPHTV MFTGCVPV+CG+PE T++GDNQIAVFDV FAYRVMQ GAVGRQAA DW+EDR V++I I+ +M L+ SLSRLSRLGGAAGG++ + N+ NSTSKILGL + + + + + 3 + gi|589889940|ref|YP_009005476.1| + baseplate subunit [Enterobacter phage PG7] >gi|583927853|gb|AHI61115.1| baseplate subunit [Enterobacter phage PG7] + YP_009005476 + 320 + + + 1 + 535.798 + 1379 + 0 + 1 + 314 + 1 + 320 + 0 + 0 + 257 + 285 + 6 + 320 + MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINST------RNSTSKILGL + MLNLDEFNNQVMNVDFQRTNMFSCVFATTPSAKSQLLLDQFGGMLYNNLPVSGDWLGLSQGEFTQGITSIITAGTQELVRKSGVSKYLIGAMTNRVVQSLLGEFEVGTYLLDFFNMAFPTSGLMIYSAKIPDNRLSHETDWLHNSPNIRITGRELEPLTLSFRMDSEASNWRAMQDWVNSVQDPVTGLRALPVDVEADIQVNLHARNGLPHTVCMFTGCVPVSCGSPEFTWDGDNQIAVFDVQFAYRVMQVGAVGRQAAADWVEDRLVHAIGNISDDMGLDPSLSRLSRLGGAGGGITQMGNAIGRKTGMWNSTSKILGL + ML LDEF NQ N+DFQRTNMFSCVFATTPSAKSQ LLDQFGGML+NNLP++ DWLGL+QGEFT G+TSIITAGTQ+LVRKSGVSKYLIGAM+NRVVQSLLGEFEVGTYLLDFFNMA+P SGLMIYS KIP+NRLSHE D+ HNSPNIRITGREL+PLT+SFRMD EASN+RAMQDWVNSVQDPVTGLRALP DVEADIQVNLHARNGLPHTV MFTGCVPV+CG+PE T++GDNQIAVFDV FAYRVMQ GAVGRQAA DW+EDR V++I I+ +M L+ SLSRLSRLGGA GG++ + N+ NSTSKILGL + + + + + 4 + gi|314121773|ref|YP_004063892.1| + gp54 baseplate subunit [Enterobacteria phage vB_EcoM-VR7] >gi|313151530|gb|ADR32586.1| gp54 baseplate subunit [Enterobacteria phage vB_EcoM-VR7] + YP_004063892 + 319 + + + 1 + 479.174 + 1232 + 6.96493e-167 + 1 + 313 + 1 + 313 + 0 + 0 + 218 + 264 + 0 + 313 + MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINSTRNSTSKILG + MFTLQEFQTQAINIDLQRNNLFSVVFATAPSSKSQNLLDQFGGALFSNLPVNSDWFGLTQGDLTQGITTLVTAGTQKLIRKSGISKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPTAGLLVHSVKLPDNTLNYEMDLNHNAPNIKITGREYSPLVLSFRMDSEAGNFRAFNDWVNSVQDPVTQLRALPEDVEADIQVNLHSRNGLPHTVVMLTGCVPVSVSAPELSYEGDNQIATFDVTFAYRVMSTGAVGRNAALEWLEDKVIKGVSGISSDNNLNAEVAKLSRLSGAQSGLTSLYNTFTGSGRAVSG + M TL EF+ QA NID QR N+FS VFAT PS+KSQ LLDQFGG LF+NLP+N+DW GLTQG+ T G+T+++TAGTQ+L+RKSG+SKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYP +GL+++SVK+P+N L++EMD NHN+PNI+ITGRE PL +SFRMD EA N+RA DWVNSVQDPVT LRALP DVEADIQVNLH+RNGLPHTV+M TGCVPV+ APEL+YEGDNQIA FDVTFAYRVM TGAVGR AAL+W+ED+ + ++GI+S+ +LN +++LSRL GA GL+ + N+ S + G + + + + + 5 + gi|308814558|ref|YP_003934832.1| + baseplate tail tube initiator [Shigella phage SP18] >gi|308206150|gb|ADO19549.1| baseplate tail tube initiator [Shigella phage SP18] + YP_003934832 + 314 + + + 1 + 478.404 + 1230 + 1.05147e-166 + 1 + 303 + 1 + 303 + 0 + 0 + 216 + 261 + 0 + 303 + MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINS + MFTLQEFQTQAINIDLQRNNLFSVVFATAPSSKSQNLLDQFGGALFSNLPVNSDWFGLTQGDLTQGITTLVTAGTQKLIRKSGISKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPTAGLLVHSVKLPDNTLNYEMDLNHNAPNIKITGREYSPLVLSFRMDSEAGNFRAFNDWVNSVQDPVTQLRALPEDVEADIQVNLHSRNGLPHTVVMLTGCVPVSVSAPELSYEGDNQIATFDVTFAYRVMSTGAVGRAAALEWLEDKVIKGVSGISSDNNLNAEVAKLSRLSGAQSGLTSLYNT + M TL EF+ QA NID QR N+FS VFAT PS+KSQ LLDQFGG LF+NLP+N+DW GLTQG+ T G+T+++TAGTQ+L+RKSG+SKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYP +GL+++SVK+P+N L++EMD NHN+PNI+ITGRE PL +SFRMD EA N+RA DWVNSVQDPVT LRALP DVEADIQVNLH+RNGLPHTV+M TGCVPV+ APEL+YEGDNQIA FDVTFAYRVM TGAVGR AAL+W+ED+ + ++GI+S+ +LN +++LSRL GA GL+ + N+ + + + + + + + 48094830 + 17186091396 + 147 + 1689397281462 + 0.041 + 0.267 + 0.14 + + + + + 4 + Query_4 + Merlin_4 + 351 + + + 1 + gi|456351276|ref|YP_007501228.1| + baseplate subunit [Salmonella phage S16] >gi|347466341|gb|AEO97127.1| baseplate subunit [Salmonella phage S16] + YP_007501228 + 350 + + + 1 + 590.882 + 1522 + 0 + 5 + 351 + 3 + 350 + 0 + 0 + 291 + 319 + 1 + 348 + VRELDDKTDALIS-GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + VKELKDTAKELWNKGEKISAGQSSQSSKIKSTVTVQYPSERSAGNDVTGNLRVHDLYKNGLLFTAYDMNSRTSGDMRNMRLGELRRTSQDIVKSVTGKNTKQVDKIPVANILLPRSKSDVDSTSHKFNDVADSLISRGGGTATGVLSNVASTAVFGALESVTQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVHDLIAIVEIYEYFNYYSYGETGNSTFAKEVKSTLDEWYKSTFLDTLTPTGAPQNDTVFEKITSFLSNVIVVSNPTVWYVRNFGNTSKFDGKTDIFGPCQIQSIRFDKTPNGVFNGLAVAPNLPSTFTLEITMREILTLNRSSIYSEGF + V+EL D L + G K SAGQSSQS+KIKST+T QYPSERSAGND +G+LRVHDLYKNGLLFTAYDMNSRT+GDMR+MRLGE++RT+ +VKS+TG NT +VDKIPV NILLPRSKSDV+S SHKFNDV DSLISRGGGTATGVLSNVASTAVFG LES+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DLIAI+EIYEYFNYYSYGETG ST+AKEVKS LDEWYKSTFLDTLTP A +NDTVFEKITSFLSNVIVVSNPTVW+VRNFG TSKFDG+ ++FGPCQIQSIRFDKTPNG FNGLA+APNLPSTFTLEITMREILTLNR+S+Y+EGF + + + + + 2 + gi|408387125|gb|AFU64134.1| + baseplate tail tube cap [Salmonella phage STML-198] + AFU64134 + 350 + + + 1 + 590.497 + 1521 + 0 + 5 + 351 + 3 + 350 + 0 + 0 + 291 + 319 + 1 + 348 + VRELDDKTDALIS-GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + VKELKDTAKELWNKGEKISAGQSSQSSKIKSTVTVQYPSERSAGNDVTGNLRVHDLYKNGLLFTAYDMNSRTSGDMRNMRLGELRRTSQDIVKSVTGKNTKQVDKIPVANILLPRSKSDVDSTSHKFNDVADSLISRGGGTATGVLSNVASTAVFGALESVTQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVHDLIAIVEIYEYFNYYSYGETGNSTFAKEVKSTLDEWYKSTFLDTLTPTGAPQNDTVFEKITSFLSNVIVVSNPTVWYVRNFGNTSKFDGKTDIFGPCQIQSIRFDKTPNGIFNGLAVAPNLPSTFTLEITMREILTLNRSSIYSEGF + V+EL D L + G K SAGQSSQS+KIKST+T QYPSERSAGND +G+LRVHDLYKNGLLFTAYDMNSRT+GDMR+MRLGE++RT+ +VKS+TG NT +VDKIPV NILLPRSKSDV+S SHKFNDV DSLISRGGGTATGVLSNVASTAVFG LES+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DLIAI+EIYEYFNYYSYGETG ST+AKEVKS LDEWYKSTFLDTLTP A +NDTVFEKITSFLSNVIVVSNPTVW+VRNFG TSKFDG+ ++FGPCQIQSIRFDKTPNG FNGLA+APNLPSTFTLEITMREILTLNR+S+Y+EGF + + + + + 3 + gi|311993188|ref|YP_004010054.1| + gp48 base plate tail tube cap [Enterobacteria phage CC31] >gi|284178026|gb|ADB81692.1| gp48 base plate tail tube cap [Enterobacteria phage CC31] + YP_004010054 + 349 + + + 1 + 559.296 + 1440 + 0 + 1 + 351 + 1 + 349 + 0 + 0 + 270 + 310 + 2 + 351 + MSIKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MAIRATEILDK--AFGSGEKTSAGQSSISSTRRSTVTAQYPAERSAGNDAAGDLRVHDLYKNGLLFTAYDMSSRTTPDLRSMRQSQLSKSASSILNSLGIKNNGQVDKSPIANILLPRSKSDVESISHKFNDVGDSLMTRGNNSATGVLSNVASTAVFGALDSITQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVADLVSIIQIYEYFNYFSYGETGNSTYAKELKGQLDEWYKTTLLSPLTPDGADLNNTMFENITSFLSNVIVVTNPTVWFIRNFGKTSKFDGRAEVFGPCQIQSIRFDKTPNGQFNGLAIAPNMPSTFTLEITFREILTLNRASLYAEGF + M+I+ E+ DK A SG KTSAGQSS S+ +ST+TAQYP+ERSAGND +G LRVHDLYKNGLLFTAYDM+SRTT D+RSMR ++ ++A+S++ S+ N +VDK P+ NILLPRSKSDVES+SHKFNDVGDSL++RG +ATGVLSNVASTAVFG L+S+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DL++II+IYEYFNY+SYGETG STYAKE+K QLDEWYK+T L LTPD A+ N+T+FE ITSFLSNVIVV+NPTVWF+RNFG TSKFDGRAEVFGPCQIQSIRFDKTPNG FNGLAIAPN+PSTFTLEIT REILTLNRAS+YAEGF + + + + + 4 + gi|589889939|ref|YP_009005475.1| + baseplate subunit [Enterobacter phage PG7] >gi|583927852|gb|AHI61114.1| baseplate subunit [Enterobacter phage PG7] + YP_009005475 + 349 + + + 1 + 536.954 + 1382 + 0 + 1 + 351 + 1 + 349 + 0 + 0 + 260 + 305 + 2 + 351 + MSIKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MAIRATEILDKD--FGSGEKTSAGQSSISSTRRSTIVAQYPAQRAAGNDAAGDLRVHDLYKNGLLFTAYDMSSRTSPDLRNMRQSQLSKSASSILNSLGIKNNGQVDKSPIANILLPRSKSDVESTSHKFNDVGESLITRGNNSATGVLSNVASTAVFGALDSVTQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVADLVSIIQIYECFNYFSYGETGNSSYAKELKGQLDEWYKTTLLSPLTPDGADLNNTMFENITSFLSNVIVVTNPTVWFIRNFGKTSKFDGRTELFGPCQIQSIRFDKTPNGQFNGLAIAPNMPSTFTLEITFREILTLSRASLYAEGF + M+I+ E+ DK SG KTSAGQSS S+ +STI AQYP++R+AGND +G LRVHDLYKNGLLFTAYDM+SRT+ D+R+MR ++ ++A+S++ S+ N +VDK P+ NILLPRSKSDVES SHKFNDVG+SLI+RG +ATGVLSNVASTAVFG L+S+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DL++II+IYE FNY+SYGETG S+YAKE+K QLDEWYK+T L LTPD A+ N+T+FE ITSFLSNVIVV+NPTVWF+RNFG TSKFDGR E+FGPCQIQSIRFDKTPNG FNGLAIAPN+PSTFTLEIT REILTL+RAS+YAEGF + + + + + 5 + gi|414086559|ref|YP_006986748.1| + baseplate tail tube cap [Enterobacteria phage vB_EcoM_ACG-C40] >gi|383396340|gb|AFH20156.1| baseplate tail tube cap [Enterobacteria phage vB_EcoM_ACG-C40] + YP_006986748 + 364 + + + 1 + 494.197 + 1271 + 1.69091e-171 + 17 + 351 + 15 + 364 + 0 + 0 + 236 + 287 + 15 + 350 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR------LGEMKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + SGETISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRTMRSNYSSSSSSILRTARNTISNTVSKLSNGLISDNNSGTISKVPVANILLPRSKSDVDTSSHRFNDVQDSLITKGGGTATGVLSNMASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDEWYRSTFIEPLTPEDAVKNKTLFEKMTSSLTNVLVVSNPTIWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF + SG SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +R+MR + RTA + + + I+ N+ + K+PV NILLPRSKSDV++ SH+FNDV DSLI++GGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LDEWY+STF++ LTP++A KN T+FEK+TS L+NV+VVSNPT+W V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F + + + + + 6 + gi|431809133|ref|YP_007236030.1| + phage baseplate tail tube cap (T4-like gp48) [Yersinia phage phiR1-RT] >gi|398313422|emb|CCI88771.1| phage baseplate tail tube cap (T4-like gp48) [Yersinia phage phiR1-RT] + YP_007236030 + 348 + + + 1 + 492.656 + 1267 + 3.88245e-171 + 1 + 351 + 1 + 347 + 0 + 0 + 242 + 290 + 6 + 352 + MSIKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSI-TGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MSIRATEITEST-IKSAGISTSAGQVTQSTAIK-TIQAQFPAERASGNDSTLDLQITDLYKNGLLFTAYDFTSRTSPDLRQNR-ADIQIAAQKKPSSIFTGTKT--VQQTPVANILLPRSKSDVDNTSHKFNDVGESLVTRGGGNATGILSNMASTAVFGALESLTQGYMSDHGEQIYNTARSMYGGADNRQKVFTWDLTPRNVQDLVQIIKIYETFNYYSYGQTGSSSFAKGLKGDLDTWYKNTFLKNMTPDGANLDNTMFEQITSFLTNVIVVSNPTVWYVRNFGATSSFDGRADVFGPCQIASIRFDKSPNGHFNGLAIAPNLPSTFVLEITFREILTLNRNSLYAGGL + MSI+ E+ + T +G+ TSAGQ +QS IK TI AQ+P+ER++GND++ L++ DLYKNGLLFTAYD SRT+ D+R R +++ A SI TGT T V + PV NILLPRSKSDV++ SHKFNDVG+SL++RGGG ATG+LSN+ASTAVFG LESLTQG M+DH EQIYNTARSMYGGADNR KVFTWDLTPR+VQDL+ II+IYE FNYYSYG+TG+S++AK +K LD WYK+TFL +TPD AN ++T+FE+ITSFL+NVIVVSNPTVW+VRNFG TS FDGRA+VFGPCQI SIRFDK+PNG+FNGLAIAPNLPSTF LEIT REILTLNR S+YA G + + + + + 7 + gi|228861125|ref|YP_002854148.1| + gp48 base plate [Enterobacteria phage RB51] >gi|422934973|ref|YP_007004933.1| baseplate tail tube cap [Escherichia phage wV7] >gi|227438799|gb|ACP31111.1| gp48 base plate [Enterobacteria phage RB51] >gi|291290411|dbj|BAI83206.1| baseplate tail tube cap [Enterobacteria phage AR1] >gi|343177527|gb|AEM00853.1| baseplate tail tube cap [Escherichia phage wV7] + YP_002854148 + 364 + + + 1 + 491.5 + 1264 + 1.72752e-170 + 17 + 351 + 15 + 364 + 0 + 0 + 235 + 286 + 15 + 350 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR------LGEMKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + SGETISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRTMRSNYSSSSSSILRTARNTISNTVSKLSNGLISDNNSGTISKVPVANILLPRSKSDVDTSSHRFNDVQDSLITKGGGTATGVLSNMASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDEWYRSTFIEPLTPEDAIKNKTLFEKMTSSLTNVLVVSNPTIWMVKNFGATSKFDGKTEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSSFTLEITMREIITLNRASLYTGTF + SG SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +R+MR + RTA + + + I+ N+ + K+PV NILLPRSKSDV++ SH+FNDV DSLI++GGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LDEWY+STF++ LTP++A KN T+FEK+TS L+NV+VVSNPT+W V+NFG TSKFDG+ EVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPS+FTLEITMREI+TLNRAS+Y F + + + + + 8 + gi|116326413|ref|YP_803133.1| + base plate [Enterobacteria phage RB32] >gi|228861506|ref|YP_002854527.1| gp48 base plate [Enterobacteria phage RB14] >gi|115344006|gb|ABI95015.1| base plate [Enterobacteria phage RB32] >gi|227438522|gb|ACP30835.1| gp48 base plate [Enterobacteria phage RB14] >gi|398313741|emb|CCI89088.1| phage baseplate tail tube cap (T4-like gp48) [Yersinia phage phiD1] >gi|525334459|gb|AGR46141.1| baseplate tail tube cap [Yersinia phage PST] + YP_803133 + 364 + + + 1 + 488.419 + 1256 + 3.32248e-169 + 17 + 351 + 15 + 364 + 0 + 0 + 237 + 286 + 15 + 350 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISSTVSKLSNGLISNNNSGTISKAPIANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF + SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + S I+ N+ + K P+ NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F + + + + + 9 + gi|639438843|ref|YP_009030800.1| + baseplate tail tube cap [Escherichia phage e11/2] >gi|628971671|gb|AHY83393.1| baseplate tail tube cap [Escherichia phage e11/2] + YP_009030800 + 364 + + + 1 + 486.878 + 1252 + 1.3135e-168 + 17 + 351 + 15 + 364 + 0 + 0 + 236 + 286 + 15 + 350 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISNTVSKLSNGLISNNNSGTISKAPIANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF + SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + + I+ N+ + K P+ NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F + + + + + 10 + gi|330858711|ref|YP_004415086.1| + putative baseplate tail tube cap [Shigella phage Shfl2] >gi|422934608|ref|YP_007004569.1| phage baseplate protein [Enterobacteria phage ime09] >gi|327397645|gb|AEA73147.1| putative baseplate tail tube cap [Shigella phage Shfl2] >gi|339791391|gb|AEK12448.1| phage baseplate protein [Enterobacteria phage ime09] + YP_004415086 + 364 + + + 1 + 486.493 + 1251 + 1.49721e-168 + 17 + 351 + 15 + 364 + 0 + 0 + 236 + 284 + 15 + 350 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKR------TANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + SGEKISAGQSTKSEVATKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILSTARNTISSTVSKLSNGLISNNNSGTISKAPVANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTIWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF + SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR TA + + S I+ N+ + K PV NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPT+W V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F + + + + + 11 + gi|397134210|gb|AFO10717.1| + baseplate protein [Escherichia phage ECML-134] + AFO10717 + 364 + + + 1 + 485.337 + 1248 + 4.36088e-168 + 17 + 351 + 15 + 364 + 0 + 0 + 236 + 285 + 15 + 350 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISSTVSKLSNGLISNNNSGTISKSPIANTLLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF + SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + S I+ N+ + K P+ N LLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F + + + + + 12 + gi|9632645|ref|NP_049806.1| + gp48 baseplate tail tube cap [Enterobacteria phage T4] >gi|138041|sp|P13339.3|VG48_BPT4 RecName: Full=Tail-tube assembly protein Gp48 [Enterobacteria phage T4] >gi|5354269|gb|AAD42476.1|AF158101_63 gp48 baseplate tail tube cap [Enterobacteria phage T4] >gi|215947|gb|AAA32539.1| tail-tube assembly protein [Enterobacteria phage T4] >gi|299780554|gb|ADJ39916.1| baseplate subunit [Enterobacteria phage T4T] >gi|628971799|gb|AHY83520.1| baseplate subunit [Enterobacteria phage T4] >gi|628972001|gb|AHY83721.1| baseplate subunit [Enterobacteria phage T4] >gi|628972192|gb|AHY83911.1| baseplate subunit [Enterobacteria phage T4] + NP_049806 + 364 + + + 1 + 484.567 + 1246 + 8.86163e-168 + 17 + 351 + 15 + 364 + 0 + 0 + 236 + 285 + 15 + 350 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTEDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISSTVSKLSNGLISNNNSGTISKSPIANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF + SG K SAGQS++S T TAQ+P+ R++GNDT+ +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + S I+ N+ + K P+ NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F + + + + + 13 + gi|642905805|ref|YP_009037574.1| + baseplate subunit [Escherichia phage vB_EcoM_JS09] >gi|642903959|gb|AIA79979.1| baseplate subunit [Escherichia phage vB_EcoM_JS09] + YP_009037574 + 369 + + + 1 + 484.952 + 1247 + 9.36795e-168 + 19 + 351 + 20 + 369 + 0 + 0 + 227 + 285 + 17 + 350 + VKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT-----------------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + VSESAGQSTKTETTTKTYVAQFPTGRAAGNDSTGDFQVTDLYKNGLLFTAYNMSARDSGSLRNLRPAYAGTSSNGIISDLTDNVKDAVTKFSNGLLPAGANKSTINKTPVANILLPRSKSDVDTTSHRFNDVGDSLITKGGGTATGVLSNIASTAVFGALDSITQGLMADNNEQIYTTSRSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAQEIKSYLDEWYRSTFIEPMTPDDAVKNKTLFEKITASLTNVLVVSNPTIWMVKNFGYTSKFDGLTDVFGPCQIQSVRFDKTPNGQFNGLAVAPNLPSTFTLEITMREIITLNRSSLYAGTF + V SAGQS+++ T AQ+P+ R+AGND++G +V DLYKNGLLFTAY+M++R +G +R++R ++N ++ +T G N + ++K PV NILLPRSKSDV++ SH+FNDVGDSLI++GGGTATGVLSN+ASTAVFG L+S+TQGLMAD+NEQIY T+RSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA+E+KS LDEWY+STF++ +TPD+A KN T+FEKIT+ L+NV+VVSNPT+W V+NFG TSKFDG +VFGPCQIQS+RFDKTPNG FNGLA+APNLPSTFTLEITMREI+TLNR+S+YA F + + + + + 14 + gi|32453688|ref|NP_861897.1| + baseplate subunit [Enterobacteria phage RB69] >gi|32350507|gb|AAP76106.1| gp48 baseplate tail tube cap [Enterobacteria phage RB69] >gi|604671902|gb|AHV82896.1| baseplate tail tube cap [Escherichia phage vB_EcoM_PhAPEC2] + NP_861897 + 369 + + + 1 + 484.567 + 1246 + 1.0678e-167 + 19 + 351 + 20 + 369 + 0 + 0 + 226 + 285 + 17 + 350 + VKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT-----------------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + VSESAGQSTKTETTTKTYVAQFPTGRAAGNDSTGDFQVTDLYKNGLLFTAYNMSARDSGSLRNLRPAYAGTSSNGIISDLTDNVKDAVTKFSNGLLPAGANKSTINKTPVANILLPRSKSDVDTTSHRFNDIGDSLITKGGGTATGVLSNIASTAVFGALDSITQGLMADNNEQIYTTSRSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAQEIKSYLDEWYRSTFIEPMTPDDAVKNKTLFEKITASLTNVLVVSNPTIWMVKNFGHTSKFDGLTDVFGPCQIQSVRFDKTPNGQFNGLAVAPNLPSTFTLEITMREIITLNRSSLYAGTF + V SAGQS+++ T AQ+P+ R+AGND++G +V DLYKNGLLFTAY+M++R +G +R++R ++N ++ +T G N + ++K PV NILLPRSKSDV++ SH+FND+GDSLI++GGGTATGVLSN+ASTAVFG L+S+TQGLMAD+NEQIY T+RSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA+E+KS LDEWY+STF++ +TPD+A KN T+FEKIT+ L+NV+VVSNPT+W V+NFG TSKFDG +VFGPCQIQS+RFDKTPNG FNGLA+APNLPSTFTLEITMREI+TLNR+S+YA F + + + + + 15 + gi|314121772|ref|YP_004063891.1| + gp48 baseplate subunit [Enterobacteria phage vB_EcoM-VR7] >gi|313151529|gb|ADR32585.1| gp48 baseplate subunit [Enterobacteria phage vB_EcoM-VR7] + YP_004063891 + 368 + + + 1 + 461.84 + 1187 + 1.08287e-158 + 3 + 351 + 1 + 368 + 0 + 0 + 228 + 285 + 21 + 369 + IKVRELD---DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR---LGEMKRTANSV----VKSIT----------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MKVKELDFDFDIAGLFNGGSKTSAGQS-KAAQTQATIVAQYPAERASGNDSSDDMRVNDLYKNGLLFTAYNFSSRTSPELRSDRSSQLTSLKKVSNGASFNPVKSLTSFAKSKLTGSGSTGKSFDSNAVANILLPRSKSDVESVSHRFNDVGESLITKGGGSATGILSNIASTAVFGALESVTNGVMADHGEQIYTTARSMYAGPDNRTKVYTWEMTPRSAQDLIQIVKIYEIFNYYSYGETGKSSFASELKDKIDTWYKSTFPSKRKAIDNFDGKLLGEEITSFLTNVLVVSNPTIWYIRNFGDTSSYDGRGELFGPCQIQSIRFDKSPDGHFGGLAIAPNLPSTFVLEITFREIITLNRGSLYAEGF + +KV+ELD D G KTSAGQS ++A+ ++TI AQYP+ER++GND+S +RV+DLYKNGLLFTAY+ +SRT+ ++RS R L +K+ +N VKS+T G+ D V NILLPRSKSDVESVSH+FNDVG+SLI++GGG+ATG+LSN+ASTAVFG LES+T G+MADH EQIY TARSMY G DNRTKV+TW++TPRS QDLI I++IYE FNYYSYGETG S++A E+K ++D WYKSTF + + E+ITSFL+NV+VVSNPT+W++RNFG TS +DGR E+FGPCQIQSIRFDK+P+G+F GLAIAPNLPSTF LEIT REI+TLNR S+YAEGF + + + + + 16 + gi|308814557|ref|YP_003934831.1| + baseplate tail tube cap [Shigella phage SP18] >gi|308206149|gb|ADO19548.1| baseplate tail tube cap [Shigella phage SP18] + YP_003934831 + 362 + + + 1 + 460.299 + 1183 + 3.47109e-158 + 3 + 351 + 1 + 362 + 0 + 0 + 228 + 285 + 21 + 366 + IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR---LGEMKRTANSV----VKSIT----------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MKVKELD-IAGLFNGGSKTSAGQS-KAAQTQATIVAQYPAERASGNDSSDDMRVNDLYKNGLLFTAYNFSSRTSPELRSDRSSQLTSLKKVSNGASFNPVKSLTSFAKSKLTGAGSTGKSFDSNAVANILLPRSKSDVESVSHRFNDVGESLITKGGGSATGILSNIASTAVFGALESVTNGVMADHGEQIYTTARSMYAGPDNRTKVYTWEMTPRSAQDLIQIVKIYEIFNYYSYGETGKSSFASELKEKIDTWYKSTFKKEAIDNFDGK--LLGEEITSFLTNVLVVSNPTIWYIRNFGDTSSYDGRGELFGPCQIQSIRFDKSPDGHFGGLAIAPNLPSTFVLEITFREIITLNRGSLYAEGF + +KV+ELD G KTSAGQS ++A+ ++TI AQYP+ER++GND+S +RV+DLYKNGLLFTAY+ +SRT+ ++RS R L +K+ +N VKS+T G+ D V NILLPRSKSDVESVSH+FNDVG+SLI++GGG+ATG+LSN+ASTAVFG LES+T G+MADH EQIY TARSMY G DNRTKV+TW++TPRS QDLI I++IYE FNYYSYGETG S++A E+K ++D WYKSTF + K + E+ITSFL+NV+VVSNPT+W++RNFG TS +DGR E+FGPCQIQSIRFDK+P+G+F GLAIAPNLPSTF LEIT REI+TLNR S+YAEGF + + + + + 17 + gi|422934215|ref|YP_007004251.1| + baseplate tail tube cap [Enterobacteria phage Bp7] >gi|345450724|gb|AEN93927.1| baseplate tail tube cap [Enterobacteria phage Bp7] + YP_007004251 + 362 + + + 1 + 458.759 + 1179 + 1.18966e-157 + 3 + 351 + 1 + 362 + 0 + 0 + 233 + 284 + 23 + 367 + IKVRELD-DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEM---------KRTANS----VVKSITGTNTN--KVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKND--TVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MKVKELDFDVASLFKGGSKTSAGQSKTPA-IKTTVTAQYPAERASGNDTSTDMVLNDLYKNGLLFTAYNFSSRVSPDLRNDRSSQMTKKFSSAASKLTGNSGTYSAVKNLFGGNTKGVKFDTQALANILLPRSKSDVDSVSHKFNDVGESLITKGGGTATGILSNVASTAVFGALESVTNGVMADSGEQIYTTARSMYAGPDNRTKVFTWEMTPRNAQDLIQIIKIYEIFNYYSYGETGNSAFAGELKEKIDTWYRSTF----KKEAIDKFDGKLLGESITSFLSNVIVVSNPTIWYIRNFGDSSSYDGREDIFGPCQIQSIRFDKTPDGHFNGLAIAPNLPSTFSLEVTFREIITLNRGSLYTEGF + +KV+ELD D G KTSAGQS A IK+T+TAQYP+ER++GNDTS + ++DLYKNGLLFTAY+ +SR + D+R+ R +M K T NS VK++ G NT K D + NILLPRSKSDV+SVSHKFNDVG+SLI++GGGTATG+LSNVASTAVFG LES+T G+MAD EQIY TARSMY G DNRTKVFTW++TPR+ QDLI II+IYE FNYYSYGETG S +A E+K ++D WY+STF + +K D + E ITSFLSNVIVVSNPT+W++RNFG +S +DGR ++FGPCQIQSIRFDKTP+G+FNGLAIAPNLPSTF+LE+T REI+TLNR S+Y EGF + + + + + 18 + gi|299779141|ref|YP_003734335.1| + 48 gene product [Enterobacteria phage IME08] >gi|298105870|gb|ADI55514.1| gp48 baseplate tail tube cap [Enterobacteria phage IME08] + YP_003734335 + 363 + + + 1 + 451.825 + 1161 + 7.00414e-155 + 3 + 351 + 2 + 363 + 0 + 0 + 228 + 283 + 23 + 367 + IKVRELD-DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEM---------KRTAN----SVVKSITGTNTN--KVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKND--TVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MKVKELDFDVASLFKGGSKTSAGQS-KAKPIQTTVTAQYPAERASGNDTSTDMVLSDLYKNGLLFTAYNFSSRVSPDLRNDRSSQMTKKFSKATGKLTGNTGGFSAVKNLFSNNSKGVKFDNQALANILLPRSKSDVDSVTHKFNDVGESLITKGGGTATGILSNVASTAVFGALESVTNGVMADSGEQIYTTARSMYAGPDNRTKVFTWEMTPRNAQDLIQIIKIYEIFNYYSYGETGNSAFAGELKEKIDTWYRSTF----KKEAIDKFDGKLLGESITSFLSNVIVVSNPTIWYIRNFGDSSSYDGREDIFGPCQIQSIRFDKTPDGHFNGLAIAPNLPSTFSLEVTFREIITLNRGSLYTEGF + +KV+ELD D G KTSAGQS ++ I++T+TAQYP+ER++GNDTS + + DLYKNGLLFTAY+ +SR + D+R+ R +M K T N S VK++ N+ K D + NILLPRSKSDV+SV+HKFNDVG+SLI++GGGTATG+LSNVASTAVFG LES+T G+MAD EQIY TARSMY G DNRTKVFTW++TPR+ QDLI II+IYE FNYYSYGETG S +A E+K ++D WY+STF + +K D + E ITSFLSNVIVVSNPT+W++RNFG +S +DGR ++FGPCQIQSIRFDKTP+G+FNGLAIAPNLPSTF+LE+T REI+TLNR S+Y EGF + + + + + 19 + gi|161622626|ref|YP_001595319.1| + gp48 baseplate tail tube cap [Enterobacteria phage JS98] >gi|238695346|ref|YP_002922539.1| gp48 baseplate tail tube cap [Enterobacteria phage JS10] >gi|52139949|gb|AAU29319.1| gp48 baseplate tail tube cap [Enterobacteria phage JS98] >gi|220029482|gb|ACL78416.1| gp48 baseplate tail tube cap [Enterobacteria phage JS10] + YP_001595319 + 362 + + + 1 + 450.669 + 1158 + 1.82386e-154 + 3 + 351 + 1 + 362 + 0 + 0 + 226 + 282 + 19 + 365 + IKVRELD-DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEM---------KRTAN----SVVKSITGTNTN--KVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF + MKVKEIDIDVASLFKGGSKTSAGQS-KAKPAQTTVTAQYPAERASGNDTSTDMVLNDLYKNGLLFTAYNFSSRVSPDLRNDRSSQMTKKFSKAAGKLTSNTGGFSAVKNLFSNNSKGVKFDSQALANILLPRSKSDVDSVTHKFNDVGESLITKGGGTATGILSNVASTAVFGALESVTNGVMADSGEQIYTTARSMYAGPDNRTKVFTWEMTPRNAQDLIQIIKIYEIFNYYSYGETGNSAFAGELKEKIDTWYRSTFKKEAIDNFDGK--LLGEGITSFLSNVIVVSNPTIWYIRNFGNTSSYDGREDIFGPCQIQSIRFDKTPDGHFNGLAIAPNLPSTFSLEVTFREIITLNRGSLYTEGF + +KV+E+D D G KTSAGQS ++ ++T+TAQYP+ER++GNDTS + ++DLYKNGLLFTAY+ +SR + D+R+ R +M K T+N S VK++ N+ K D + NILLPRSKSDV+SV+HKFNDVG+SLI++GGGTATG+LSNVASTAVFG LES+T G+MAD EQIY TARSMY G DNRTKVFTW++TPR+ QDLI II+IYE FNYYSYGETG S +A E+K ++D WY+STF + K + E ITSFLSNVIVVSNPT+W++RNFG TS +DGR ++FGPCQIQSIRFDKTP+G+FNGLAIAPNLPSTF+LE+T REI+TLNR S+Y EGF + + + + + 20 + gi|311992692|ref|YP_004009560.1| + gp48 baseplate tail tube cap [Acinetobacter phage Ac42] >gi|298684475|gb|ADI96436.1| gp48 baseplate tail tube cap [Acinetobacter phage Ac42] + YP_004009560 + 358 + + + 1 + 447.588 + 1150 + 2.52876e-153 + 3 + 349 + 1 + 355 + 0 + 0 + 217 + 280 + 14 + 358 + IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR---------LGEMKRTA-NSVVKSITGTNTNK-VDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + MKVKEIT-IANIVQAGTDVSAGYTNKRSEPK-TMIAQYPSERSSGNDAS-DMQISDLYRNGLLFTAYDYKSRTTPDMRGMRKREQNKVKALYEQTRTQFNRITSGITSESPKKSVSQDPVANILMPRSKSDSENINHKFNDVGDSLITKGGGTMTGAISNMASTAVFGAIESMTQGLLSDKGEQIYTTARSMYAGPENRTKVYSWELTPRTIDDLVQIIRIYEIFNFYSYGMTGNSQYAKELKSQIDEWYKKTFINNLTPEGSDRSGTMMESVTAFLSNVIVVTNPTVWFVRNFGKTTKFDGRPDVFGPAQIQSIRFDKAPDGNFRGLSIAPNMPSTFVLEVTMREILTLSRGTLYGD + +KV+E+ + + +G SAG +++ ++ K T+ AQYPSERS+GND S +++ DLY+NGLLFTAYD SRTT DMR MR L E RT N + IT + K V + PV NIL+PRSKSD E+++HKFNDVGDSLI++GGGT TG +SN+ASTAVFG +ES+TQGL++D EQIY TARSMY G +NRTKV++W+LTPR++ DL+ II IYE FN+YSYG TG S YAKE+KSQ+DEWYK TF++ LTP+ ++++ T+ E +T+FLSNVIVV+NPTVWFVRNFG T+KFDGR +VFGP QIQSIRFDK P+GNF GL+IAPN+PSTF LE+TMREILTL+R ++Y + + + + + + 21 + gi|326536336|ref|YP_004300777.1| + gp48 baseplate tail tube cap [Acinetobacter phage 133] >gi|299483417|gb|ADJ19511.1| gp48 baseplate tail tube cap [Acinetobacter phage 133] + YP_004300777 + 356 + + + 1 + 438.343 + 1126 + 1.19665e-149 + 17 + 349 + 13 + 354 + 0 + 0 + 210 + 264 + 13 + 344 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRT-----------ANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + AGTEISAGYTKQDT-TQQTFSAQYPAERSAGNDATKTSN-GDLYRNGLLFTAYDYKARATPDMTRQRQGELDKARSLYTRISSGLADAGKRSSTQGQDKKIVKDPVANILLPRSKSDSDVVSHKFNDVQDSLITRGGGTATGILSNIASTAVFGTIESVTQGWMADKGEQIFNASRSMYNGAENRSKVYTWELTPRTLEDLVEIMKIYEIFNYYSYGMTGTSAYAKELKAYIDDWYKKTFLNNLTPEGSDKSGTAMESVTSFLSNVITVSNPTIWFVRNFGKSTKFDGRPDVFGPAQIQSIRFDKAPEGHFKGLAIAPNMPSTFVLEITMREVIALSRGSIYGE + +G + SAG + Q + T +AQYP+ERSAGND + + DLY+NGLLFTAYD +R T DM R GE+ + A++ +S T K+ K PV NILLPRSKSD + VSHKFNDV DSLI+RGGGTATG+LSN+ASTAVFG +ES+TQG MAD EQI+N +RSMY GA+NR+KV+TW+LTPR+++DL+ I++IYE FNYYSYG TGTS YAKE+K+ +D+WYK TFL+ LTP+ ++K+ T E +TSFLSNVI VSNPT+WFVRNFG ++KFDGR +VFGP QIQSIRFDK P G+F GLAIAPN+PSTF LEITMRE++ L+R S+Y E + + + + + 22 + gi|311992948|ref|YP_004009815.1| + gp48 baseplate [Acinetobacter phage Acj61] >gi|295815237|gb|ADG36163.1| gp48 baseplate [Acinetobacter phage Acj61] + YP_004009815 + 364 + + + 1 + 416.001 + 1068 + 9.51542e-141 + 5 + 348 + 3 + 360 + 0 + 0 + 203 + 264 + 14 + 358 + VRELDDKTDALIS--GVKTSAGQSSQSAKIKSTI-TAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSV---------VKSITGTNTNKVDKI--PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA + VKEIVDSETNLIERIGSFVAAGRSSKEEESKTKIFEAQYPDGRAAATDSVDDARIQDLYANGLLFTAVEYKGRTTPEMTDMRGQVMKNMVDAIDQAKGVFNQLRGKSGGNKKISSAIKNPVCQILLPRSKTDTDTISHKFNDVNESLITRGNGTATGILSNLASTAVFGAVESISQGVMADHGEQIYNTSRAMYGGAENRTKTYTWELTPRTEGDLVQIIRIYELFSFFSYGVTGNSAYAKEIKGQIDDWYKKTFINNLTPEGADRSGTMMESVTSFLSNVIVVSNPTVWFIQNFGTMTTYDKHADVFGPAQISNIRFDKAPDGNFSGLAIAPNMPSTFVLEITFREILTLNRGSLYG + V+E+ D LI G +AG+SS+ + K+ I AQYP R+A D+ R+ DLY NGLLFTA + RTT +M MR MK +++ ++ +G N I PV ILLPRSK+D +++SHKFNDV +SLI+RG GTATG+LSN+ASTAVFG +ES++QG+MADH EQIYNT+R+MYGGA+NRTK +TW+LTPR+ DL+ II IYE F+++SYG TG S YAKE+K Q+D+WYK TF++ LTP+ A+++ T+ E +TSFLSNVIVVSNPTVWF++NFGT + +D A+VFGP QI +IRFDK P+GNF+GLAIAPN+PSTF LEIT REILTLNR S+Y + + + + + 23 + gi|311993474|ref|YP_004010339.1| + gp48 baseplate tail tube cap [Acinetobacter phage Acj9] >gi|295917431|gb|ADG60102.1| gp48 baseplate tail tube cap [Acinetobacter phage Acj9] + YP_004010339 + 360 + + + 1 + 412.92 + 1060 + 1.46922e-139 + 3 + 349 + 1 + 357 + 0 + 0 + 212 + 267 + 22 + 363 + IKVRELDDKTDALIS--GVKTSAGQSSQSAKIKSTI-TAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR-----LGEMKRTANSVVKSI---TGTNTNKVDKI--PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEA---NKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + MQIEEITD----LVSKAGSDISAGQSMRSQESETKILTAQYPAERSASVANTADVGVGQSYSNGLLFTAFEYKSRTTNDLRSMRTKAQNAAKVLRSSKSVTKAIQAVTGGNPNDPNTIKNPVANILMPRSKTDTDVTGHKFNDVGESLISRGGGTATGILSNVASTAVFGTIESVTKGAMADHGEQIYNTSRSMYAGAENRVKTYTWELTPRTYDDLTQIVKIYEIFNYLSYGMTGKSAFAKGVKDEIDKWYRKTFINPL--NEATGSNVQSTTMESVTSFLSNVIVVSNPTVWTIQNFGTASKFDGLADVFGPAQISNIRFDKAPDGQFNGLAAAPNMPSSFVLEVTFREILTLNRATIYGE + +++ E+ D L+S G SAGQS +S + ++ I TAQYP+ERSA + + V Y NGLLFTA++ SRTT D+RSMR ++ R++ SV K+I TG N N + I PV NIL+PRSK+D + HKFNDVG+SLISRGGGTATG+LSNVASTAVFG +ES+T+G MADH EQIYNT+RSMY GA+NR K +TW+LTPR+ DL I++IYE FNY SYG TG S +AK VK ++D+WY+ TF++ L +EA N T E +TSFLSNVIVVSNPTVW ++NFGT SKFDG A+VFGP QI +IRFDK P+G FNGLA APN+PS+F LE+T REILTLNRA++Y E + + + + + 24 + gi|639438515|ref|YP_009030255.1| + baseplate subunit [Serratia phage PS2] >gi|625370588|gb|AHY25448.1| baseplate subunit [Serratia phage PS2] + YP_009030255 + 358 + + + 1 + 411.379 + 1056 + 4.21058e-139 + 18 + 350 + 20 + 357 + 0 + 0 + 201 + 252 + 7 + 339 + GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTA----NSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANK--NDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEG + GETIGAGSTGQKKLIQKTLQAQFPAERSAGTDGSSDLRVNDLYRNGLLFTAYDFDARTTQALRDFRKKNNTKTVLDQWNPIKFLTNYGSTFQLNQEAVANILMPRSQSDVDNISHKFNDVGESLTGRNGGDVGKTISNMASTAVFGALESVTQGIMADKGEQVYNSARSMYAGPDNRTKIFVWNLTPRTVYDLLEILKIYEIFAYYSYGRVGYSPWAKDLKSQIDAWYKET-LTKATFDQAKGEVKDTFFEGITDFLTNVITVSNPTIWTVKNFGRTSSFDGKTDIFGPCQIQSIRFDKSPNGHFNGLAIAPNLPSTFVLEITMREIMTLNRDVLFAEG + G AG + Q I+ T+ AQ+P+ERSAG D S LRV+DLY+NGLLFTAYD ++RTT +R R +T N + +T ++++ V NIL+PRS+SDV+++SHKFNDVG+SL R GG +SN+ASTAVFG LES+TQG+MAD EQ+YN+ARSMY G DNRTK+F W+LTPR+V DL+ I++IYE F YYSYG G S +AK++KSQ+D WYK T L T D+A DT FE IT FL+NVI VSNPT+W V+NFG TS FDG+ ++FGPCQIQSIRFDK+PNG+FNGLAIAPNLPSTF LEITMREI+TLNR ++AEG + + + + + 25 + gi|33620542|ref|NP_891751.1| + gp48 baseplate tail tube cap [Enterobacteria phage RB49] >gi|33348009|gb|AAQ15410.1| gp48 baseplate tail tube cap [Enterobacteria phage RB49] + NP_891751 + 352 + + + 1 + 408.683 + 1049 + 4.9384e-138 + 3 + 348 + 1 + 349 + 0 + 0 + 200 + 260 + 13 + 354 + IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT--------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA + MKISVINDAVDSFKAGVKTSAGFTSKNKG--KTLTAQFPAERASGNDASG-YYINDLYNNGLLFTAYDYTSRTTGSLRDFR--KKKNVASGFGGSVNIAGFDLNLGGRNAAFDREAIANILLPRSQSDVDAASHKFNDVGESVISRGGGTLGGALSNMASTAVFGGIESITGGYLADHGEQIYNTARSMYAGADARTKNYVWHLTPRSIEDLRNILIIYETFLELSYGSSGISSTAKELKAEVDAWYKNTLLRKSTPEEAKRNDTLFEGITDFLSNVITVSNPTIWMISNFGKRTSFEGRSDAFGPAQISSVRLDKSPDGKFNGLAISPNLPSTFVLEVTFREILTLSRGTIFG + +K+ ++D D+ +GVKTSAG +S++ T+TAQ+P+ER++GND SG ++DLY NGLLFTAYD SRTTG +R R + K A+ S+ G D+ + NILLPRS+SDV++ SHKFNDVG+S+ISRGGGT G LSN+ASTAVFGG+ES+T G +ADH EQIYNTARSMY GAD RTK + W LTPRS++DL I+ IYE F SYG +G S+ AKE+K+++D WYK+T L TP+EA +NDT+FE IT FLSNVI VSNPT+W + NFG + F+GR++ FGP QI S+R DK+P+G FNGLAI+PNLPSTF LE+T REILTL+R +++ + + + + + 26 + gi|238695065|ref|YP_002922259.1| + gp48 baseplate tail tube cap [Enterobacteria phage JSE] >gi|220029201|gb|ACL78136.1| gp48 baseplate tail tube cap [Enterobacteria phage JSE] + YP_002922259 + 352 + + + 1 + 406.757 + 1044 + 2.44502e-137 + 3 + 348 + 1 + 349 + 0 + 0 + 199 + 259 + 13 + 354 + IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT--------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA + MKISVINDAVDSFKAGVKTSAGFTSKNKG--KTLTAQFPAERASGNDASG-YYINDLYNNGLLFTAYDYTSRTTGSLRDFR--KKKNVASGFGGSVNIAGFDLNLGGRNAAFDREAIANILLPRSQSDVDAASHKFNDVGESVISRGGGTLGGALSNMASTAVFGGIESITGGYLADHGEQIYNTARSMYAGADARTKNYVWHLTPRSIEDLRNILIIYETFLELSYGSSGISSTAKELKAEVDAWYKNTLLSKSTPAEAKRNDTLFEGITDFLSNVITVSNPTIWMISNFGKRTSFEGRSDAFGPAQISSVRLDKSPDGKFNGLAISPNLPSTFVLEVSFREILTLSRGTIFG + +K+ ++D D+ +GVKTSAG +S++ T+TAQ+P+ER++GND SG ++DLY NGLLFTAYD SRTTG +R R + K A+ S+ G D+ + NILLPRS+SDV++ SHKFNDVG+S+ISRGGGT G LSN+ASTAVFGG+ES+T G +ADH EQIYNTARSMY GAD RTK + W LTPRS++DL I+ IYE F SYG +G S+ AKE+K+++D WYK+T L TP EA +NDT+FE IT FLSNVI VSNPT+W + NFG + F+GR++ FGP QI S+R DK+P+G FNGLAI+PNLPSTF LE++ REILTL+R +++ + + + + + 27 + gi|157311484|ref|YP_001469527.1| + gp48 baseplate tail tube cap [Enterobacteria phage Phi1] >gi|149380688|gb|ABR24693.1| gp48 baseplate tail tube cap [Enterobacteria phage Phi1] + YP_001469527 + 352 + + + 1 + 405.601 + 1041 + 6.50999e-137 + 3 + 348 + 1 + 349 + 0 + 0 + 198 + 259 + 13 + 354 + IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT--------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA + MKISVINDAVDSFKAGVKTSAGFTSKNKG--KTLTAQFPAERASGNDASG-YYINDLYNNGLLFTAYDYTSRTTGSLRDFR--KKKNVASGFGGSVNIAGFDLNLGGRNAAFDREAIANILLPRSQSDVDAASHKFNDVGESVISRGGGTLGGALSNMASTAVFGGIESITGGYLADHGEQIYNTARSMYAGADARTKNYVWHLTPRSIEDLRNILIIYETFLELSYGSSGISSTAKELKAEVDAWYKNTLLRKSTPEEAKRNDTLFEGITDFLSNAITVSNPTIWMISNFGKRTSFEGRSDAFGPAQISSVRLDKSPDGKFNGLAISPNLPSTFVLEVSFREILTLSRGTIFG + +K+ ++D D+ +GVKTSAG +S++ T+TAQ+P+ER++GND SG ++DLY NGLLFTAYD SRTTG +R R + K A+ S+ G D+ + NILLPRS+SDV++ SHKFNDVG+S+ISRGGGT G LSN+ASTAVFGG+ES+T G +ADH EQIYNTARSMY GAD RTK + W LTPRS++DL I+ IYE F SYG +G S+ AKE+K+++D WYK+T L TP+EA +NDT+FE IT FLSN I VSNPT+W + NFG + F+GR++ FGP QI S+R DK+P+G FNGLAI+PNLPSTF LE++ REILTL+R +++ + + + + + 28 + gi|401824981|gb|AFQ22671.1| + baseplate tail tube cap [Stenotrophomonas phage IME13] + AFQ22671 + 342 + + + 1 + 368.237 + 944 + 2.03823e-122 + 8 + 349 + 7 + 341 + 0 + 0 + 181 + 241 + 13 + 345 + LDDKTDALISGV---KTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + LDGGVQDVVGGILKGENPATGSSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALFGGLESITQGAFADRGEQVYITSRAMYAGADNRTKTYTWQLTPRNVYDLMQILIIYEMLSYYSYGAVEKSKTASQIKSTLDKAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDVFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE + LD ++ G+ + A SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A+FGGLES+TQG AD EQ+Y T+R+MY GADNRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD+ YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R++VFGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E + + + + + 29 + gi|472438117|ref|YP_007677897.1| + baseplate tail tube cap [Aeromonas phage Aes012] >gi|395653255|gb|AFN69810.1| baseplate tail tube cap [Aeromonas phage Aes012] + YP_007677897 + 342 + + + 1 + 364.385 + 934 + 7.92274e-121 + 8 + 349 + 7 + 341 + 0 + 0 + 178 + 240 + 13 + 345 + LDDKTDALISGV---KTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + LDGGVQDVVGGILKGENPATGSSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALYGGLESITQGAFADRGEQVYIASRAMYAGADNRTKTYTWQLTPRNVYDLMQILIIYEMLSYYSYGAVEKSKTASQIKSTLDKAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDMFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE + LD ++ G+ + A SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A++GGLES+TQG AD EQ+Y +R+MY GADNRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD+ YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R+++FGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E + + + + + 30 + gi|310722276|ref|YP_003969100.1| + unnamed protein product [Aeromonas phage phiAS4] >gi|306021119|gb|ADM79654.1| baseplate protein [Aeromonas phage phiAS4] + YP_003969100 + 342 + + + 1 + 363.999 + 933 + 1.00609e-120 + 8 + 349 + 11 + 341 + 0 + 0 + 177 + 239 + 11 + 342 + LDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + VQDVVGGILKGENPATG-SSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALYGGLESITQGAFADRGEQVYIASRAMYAGAENRTKTYTWQLTPRNVYDLMQILIIYEMLSYYSYGAVEKSKTASQIKSTLDKAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDVFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE + + D ++ G + G SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A++GGLES+TQG AD EQ+Y +R+MY GA+NRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD+ YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R++VFGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E + + + + + 31 + gi|109290161|ref|YP_656410.1| + gp48 base plate protein [Aeromonas phage 25] >gi|423262259|ref|YP_007010858.1| baseplate tail tube cap [Aeromonas phage Aes508] >gi|104345834|gb|ABF72734.1| gp48 base plate protein [Aeromonas phage 25] >gi|402762137|gb|AFQ97251.1| baseplate tail tube cap [Aeromonas phage Aes508] + YP_656410 + 342 + + + 1 + 362.459 + 929 + 3.78445e-120 + 8 + 349 + 11 + 341 + 0 + 0 + 176 + 238 + 11 + 342 + LDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + IQDVVGGILKGENPATG-SSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALYGGLESITQGAFADRGEQVYIASRAMYAGAENRTKTYTWQLTPRNVYDLMQILTIYEMLSYYSYGAVEKSKTASQIKSTLDNAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDMFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE + + D ++ G + G SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A++GGLES+TQG AD EQ+Y +R+MY GA+NRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R+++FGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E + + + + + 32 + gi|37651665|ref|NP_932539.1| + baseplate subunit [Aeromonas phage 44RR2.8t] >gi|66391986|ref|YP_238911.1| baseplate tail tube cap [Aeromonas phage 31] >gi|34732965|gb|AAQ81502.1| baseplate tail tube cap [Aeromonas phage 44RR2.8t] >gi|62114823|gb|AAX63671.1| gp48 [Aeromonas phage 31] + NP_932539 + 342 + + + 1 + 362.073 + 928 + 5.01898e-120 + 3 + 349 + 1 + 341 + 0 + 0 + 174 + 245 + 14 + 351 + IKVREL-DDKTDALISGV---KTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + MKVTELIDGGVQDVVKGILKGENPAGGSTPRQPLSKITIAQFPAERNAANDSTQDFNVNDLYKNGLLLSAFNYSGRQTGDLRSFRTDQ-----NNI-----GDYRKGVVKEAIANILMPKGQTDIDTINHKFNDVQQSLVERGNGSITGALSSMASHAVYGGLESITQGAFADRGEQVYIASRAMYAGAENRTKTYTWQLTPRNVYDLVEIIKIYEMLSYYSYGSVEKSNTANDIRKSVDAAYKETIINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGQSSSFDSRSDIFGPAQIQSIRFDKSPDGHFGGLAVAPNLPSSFVLEVTFREILALNRSDLYSE + +KV EL D ++ G+ + AG S+ + AQ+P+ER+A ND++ V+DLYKNGLL +A++ + R TGD+RS R + N++ G V K + NIL+P+ ++D+++++HKFNDV SL+ RG G+ TG LS++AS AV+GGLES+TQG AD EQ+Y +R+MY GA+NRTK +TW LTPR+V DL+ II+IYE +YYSYG S A +++ +D YK T ++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG +S FD R+++FGP QIQSIRFDK+P+G+F GLA+APNLPS+F LE+T REIL LNR+ +Y+E + + + + + 33 + gi|582955110|gb|AHI44678.1| + baseplate tail tube cap [Acinetobacter phage ZZ1] + AHI44678 + 216 + + + 1 + 302.753 + 774 + 1.69313e-98 + 138 + 349 + 1 + 213 + 0 + 0 + 139 + 171 + 1 + 213 + ISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEA-NKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + MTRGNGSPTGILSNMASTAVFGAIESATQGAMADHGEQIYNTSRSMYAGAENRTKTYSWDLTPRTPEDLSQILKIYEIFNYLSYGMTGNSAFAKSIKDEIDNWYKKTFIKPINDATGTTTQSTVMESVTSFLSNVIVVSNPTVWFIQNFGTQSKYDGLADIFGPAQISNIRFEKTSDGNFNGLAIAPNMPSTFVLEVTFREILTLNRASLYGE + ++RG G+ TG+LSN+ASTAVFG +ES TQG MADH EQIYNT+RSMY GA+NRTK ++WDLTPR+ +DL I++IYE FNY SYG TG S +AK +K ++D WYK TF+ + TV E +TSFLSNVIVVSNPTVWF++NFGT SK+DG A++FGP QI +IRF+KT +GNFNGLAIAPN+PSTF LE+T REILTLNRAS+Y E + + + + + 34 + gi|392973134|ref|YP_006489092.1| + putative split baseplate tail tube cap [Acinetobacter phage ZZ1] + YP_006489092 + 202 + + + 1 + 284.263 + 726 + 1.55814e-91 + 152 + 349 + 1 + 199 + 0 + 0 + 131 + 159 + 1 + 199 + VASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANK-NDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE + MASTAVFGAIESATQGAMADHGEQIYNTSRSMYAGAENRTKTYSWDLTPRTPEDLSQILKIYEIFNYLSYGMTGNSAFAKSIKDEIDNWYKKTFIKPINDATGTTTQSTVMESVTSFLSNVIVVSNPTVWFIQNFGTQSKYDGLADIFGPAQISNIRFEKTSDGNFNGLAIAPNMPSTFVLEVTFREILTLNRASLYGE + +ASTAVFG +ES TQG MADH EQIYNT+RSMY GA+NRTK ++WDLTPR+ +DL I++IYE FNY SYG TG S +AK +K ++D WYK TF+ + TV E +TSFLSNVIVVSNPTVWF++NFGT SK+DG A++FGP QI +IRF+KT +GNFNGLAIAPN+PSTF LE+T REILTLNRAS+Y E + + + + + 35 + gi|294661512|ref|YP_003579965.1| + gp48 baseplate subunit [Klebsiella phage KP15] >gi|448260646|ref|YP_007348740.1| baseplate tail tube cap [Klebsiella phage KP27] >gi|292660673|gb|ADE34921.1| gp48 baseplate subunit [Klebsiella phage KP15] >gi|370343455|gb|AEX26584.1| baseplate tail tube cap [Klebsiella phage KP27] + YP_003579965 + 357 + + + 1 + 170.244 + 430 + 1.23976e-45 + 3 + 347 + 1 + 353 + 0 + 0 + 111 + 191 + 32 + 365 + IKVRELDDKTDALIS----GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGD-MRSMRLGEMKRTANSVVKSITGT-------NTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYK---STFLDTLTPDE-----ANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY + MKFSIIDDSINTLKNIKNRGIPSGGAAITESVLKQTIVTAEFPAQRAAGIDNA--YNASSLYNNGLLFTAYDFNGVGSKDNYRSLR--QAAQNPKQILSSATGNVKYKQVLNSSIGTMEPVCQILLPRSLNDNEVNSHRYQDANDSFLTKG-------LSRVVSNMVWGAVESISGGIMADRREALDVGTKAAFQGSDKRTKMYYNTFVIESRNDLLELIKIYYLFTVLGYGTTSGGT-AKEVAALVKQYYGVLGAKTANAISPSSNPVTASDFDNSLGNDVVDFISNVEVIKSPPVWFIRDFQSGDSLRLPHSTFGPAGITSVRFGRSIDNIVNTLRESPNTPISLEVEIQFMELIDMRQDSIF + +K +DD + L + G+ + ++S ++ +TA++P++R+AG D + LY NGLLFTAYD N + D RS+R + + ++ S TG N++ PV ILLPRS +D E SH++ D DS +++G LS V S V+G +ES++ G+MAD E + ++ + G+D RTK++ S DL+ +I+IY F YG T T AKEV + + ++Y + + ++P ++ ++++ + F+SNV V+ +P VWF+R+F + FGP I S+RF ++ + N L +PN P + +EI E++ + + S++ + + + + + 36 + gi|66391556|ref|YP_239081.1| + gp48 baseplate [Enterobacteria phage RB43] >gi|62288644|gb|AAX78627.1| gp48 baseplate [Enterobacteria phage RB43] >gi|406718846|emb|CCL97571.1| protein of unknown function [Enterobacteria phage RB43] >gi|415434114|emb|CCK73954.1| protein of unknown function [Enterobacteria phage RB43] + YP_239081 + 361 + + + 1 + 168.703 + 426 + 6.23176e-45 + 3 + 347 + 1 + 357 + 0 + 0 + 111 + 191 + 36 + 369 + IKVRELDDKTDALI----SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYD----MNSRTTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKST---FLDTLTPDE-----ANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY + MKIKVLQDTVQSFAEIKNAGIPSGGATTTKNALSQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYDFTGGLAPGSKDNYRSLR--QAAQNAKQILSANTGNVRYKQVLNTRTMGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKG-------LSRAVSNVIWGAVESVSGGILADRREAIDIGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTPA-ELAGLVKTAYNNTASKVANVFAPSSNQTTASDFNDSIGDQIVDFVSNVEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPISVEIEIQFMELIDMRQDSIF + +K++ L D + +G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAYD + + + RS+R + + A ++ + TG NT + + P+ ILLPRS +D E SH++ D DS++++G LS S ++G +ES++ G++AD E I ++ + G+D RTK++ S DL+ +I+IY F YG T T A E+ + Y +T + P ++ ND++ ++I F+SNV V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P + +EI E++ + + S++ + + + + + 37 + gi|509141759|ref|YP_008060624.1| + baseplate tail tube cap [Escherichia phage Lw1] >gi|479258586|gb|AGJ71509.1| baseplate tail tube cap [Escherichia phage Lw1] + YP_008060624 + 364 + + + 1 + 156.377 + 394 + 2.35983e-40 + 3 + 347 + 1 + 360 + 0 + 0 + 106 + 187 + 39 + 372 + IKVRELDDKTDALI----SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSR----TTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGET--GTSTYAKEVKSQLDEWYKSTFLDTL---------TPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY + MKIKVLQDTVQSFAKIKNAGIPSGGATTTKNALTQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYEFTGGFAPGSKDNYRSLR--QAAQNAQQILSANTGNVRYKQVLNTRTMGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKGP-------SRVVSNVIWGVIESASGGILADRREAVDVGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTAAEIAELAKQTINKASTTGAKLINNAAAGNGPTPTVSN-GSIISDQMVDFVTNIEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPISVEIEIQFMELIDMRQDSIF + +K++ L D + +G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAY+ + + RS+R + + A ++ + TG NT + + P+ ILLPRS +D E SH++ D DS++++G S V S ++G +ES + G++AD E + ++ + G+D RTK++ S DL+ +I+IY F YG T GT+ E+ Q +T + TP +N + +++ F++N+ V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P + +EI E++ + + S++ + + + + + 38 + gi|304373651|ref|YP_003858396.1| + gp48 baseplate tail tube cap [Enterobacteria phage RB16] >gi|299829607|gb|ADJ55400.1| gp48 baseplate tail tube cap [Enterobacteria phage RB16] + YP_003858396 + 364 + + + 1 + 155.221 + 391 + 6.71724e-40 + 3 + 347 + 1 + 360 + 0 + 0 + 106 + 186 + 39 + 372 + IKVRELDDKTDALI----SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSR----TTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGET--GTSTYAKEVKSQLDEWYKSTFLDTL---------TPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY + MKIKVLQDTVQSFAEIKNAGIPSGGATTTKNALTQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYEFTGGFAPGSKDNYRSLR--QAAQNAQQILSANTGNVRYKQVLNTRTMGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKGP-------SRVVSNVIWGVIESASGGILADRREAVDVGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTAAEIAELAKQTINKSSTTGAKLINNAVAGNGPTPTVSN-GSIISDQMVDFVINIEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPISVEIEIQFMELIDMRQDSIF + +K++ L D + +G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAY+ + + RS+R + + A ++ + TG NT + + P+ ILLPRS +D E SH++ D DS++++G S V S ++G +ES + G++AD E + ++ + G+D RTK++ S DL+ +I+IY F YG T GT+ E+ Q +T + TP +N + +++ F+ N+ V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P + +EI E++ + + S++ + + + + + 39 + gi|414086183|ref|YP_006986373.1| + baseplate tail tube cap [Cronobacter phage vB_CsaM_GAP161] >gi|378566508|gb|AFC22204.1| baseplate tail tube cap [Cronobacter phage vB_CsaM_GAP161] + YP_006986373 + 364 + + + 1 + 153.68 + 387 + 2.64906e-39 + 17 + 347 + 19 + 360 + 0 + 0 + 102 + 178 + 43 + 358 + SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYD----MNSRTTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLT--------------PDEANKNDTVF-EKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY + AGIPSGGAATTKNALTQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYEFTGGLAPGSKDNYRSLR--QAAQNAQQILSANTGNVRYKQVLNSRTIGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKGP-------SRVVSNVIWGAIESASGGILADRREAVDVGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTAA-----EIAELAKQTINKSSTAGAKLINNAIAGNGPTPTVSNGSIISDQAVDFVTNIEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPIAVEIEIQFMELIDMRQDSIF + +G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAY+ + + + RS+R + + A ++ + TG N+ + + P+ ILLPRS +D E SH++ D DS++++G S V S ++G +ES + G++AD E + ++ + G+D RTK++ S DL+ +I+IY F YG T T A ++ E K T + T P N ++ ++ F++N+ V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P +EI E++ + + S++ + + + + + 40 + gi|392973135|ref|YP_006489093.1| + putative split baseplate tail tube cap [Acinetobacter phage ZZ1] + YP_006489093 + 143 + + + 1 + 107.071 + 266 + 1.55074e-24 + 22 + 136 + 19 + 143 + 0 + 0 + 59 + 80 + 10 + 125 + SAGQSSQSAKIKSTI-TAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMK-----RTANSVVKSITG----TNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDS + SAGQSQKSKETKTKIMTAQFPAERAASVDTTNAAEVGQNYQNGLLFTAYEYTSRTTPDLRSMRQRVQKSYKVLESTQKILSAVAGVSGQTEGRSTSKAPVANILMPRSKTDSDNTSHKFNDVGES + SAGQS +S + K+ I TAQ+P+ER+A DT+ + V Y+NGLLFTAY+ SRTT D+RSMR K + ++ ++ G T K PV NIL+PRSK+D ++ SHKFNDVG+S + + + + + 41 + gi|646519388|ref|WP_025548737.1| + hypothetical protein [Vibrio parahaemolyticus] >gi|655769907|gb|KEE53216.1| hypothetical protein EM88_01435 [Vibrio parahaemolyticus] >gi|655811799|gb|KEE89780.1| hypothetical protein EM91_01710 [Vibrio parahaemolyticus] + WP_025548737 + 356 + + + 1 + 60.8474 + 146 + 3.83249e-07 + 87 + 346 + 109 + 342 + 0 + 0 + 65 + 105 + 44 + 269 + MKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNT-ARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNF--------GTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASV + MPLLQDSLVHDIGGS----VDDITSVALAAGLDVADLEGDLSKLSSGVKSLVQNAKDITVGTVSQQAG-------QGSRQSTLASGNKVIQNNPGTDSWQGTQLREQTLIWQFNPKSLPELKAVASIIKTFKLLSLGSIGNSS------------------NELT--QANNNDRLNNPYGHIAS---CIKTPPLWFLEEVSDYYTGQDGAGARYTDRL-VFGPAAIASIKVNRTPDQYWKTFKGTAGDPASLDLEITFIELLPLDKETV + M +S+V I G+ VD I V + +D+E K + SL+ G +S A + Q +A N+ I N + G R + W P+S+ +L A+ I + F S G G S+ + LT +AN ND + S + P +WF+ G +++ R VFGP I SI+ ++TP+ + P++ LEIT E+L L++ +V + + + + + 42 + gi|589286464|ref|YP_009006262.1| + tail-tube assembly protein [Vibrio phage VH7D] >gi|432142395|gb|AGB06975.1| tail-tube assembly protein [Vibrio phage VH7D] + YP_009006262 + 378 + + + 1 + 58.5362 + 140 + 2.65852e-06 + 60 + 344 + 61 + 339 + 0 + 0 + 73 + 122 + 50 + 307 + YKNGLLFTAYDMNSRTTGDMRSMR----------------LGEMKRTANSVVKSITGTNTNKVDKIP--VVNILLPRSKSDV--ESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTT--SKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRA + HPNFFIFRAYDLAHTTKQHYTDMRSSFTAAQTENEQSGEVPSELKATLALYAPNIVEEVSHEYDKTPTSVLNDFLASAASAAGSDTVSEGVDRGKRAVATAAGATLAQIKRSFIQSNAAGQLEK-NSSVVTD------NVTVTAYKGTAQRTQTMVYQFHPKSLDELKVVAEIIKTF----YG------LSLPVKGQID----SQLLDTGTANLGSGFAAGFAKYATLLKT------PPVWMIEEVSDTDATRYTPRF-IFGPAGITSVKLNRTPDQYWRTFRGTAGDPAGIELEITFSELIPLDRA + + N +F AYD+ T MR E+K T +I +++ DK P V+N L + S ++VS + ++ + G T + + + G LE ++ D N + Y G RT+ + P+S+ +L + EI + F YG + VK Q+D S LDT T + + F K + L P VW + T +++ R +FGP I S++ ++TP+ + P+ LEIT E++ L+RA + + + + + + + 48094830 + 17186091396 + 148 + 2043815480868 + 0.041 + 0.267 + 0.14 + + + + + 5 + Query_5 + Merlin_5 + 576 + + + 1 + gi|456351275|ref|YP_007501227.1| + baseplate hub [Salmonella phage S16] >gi|347466340|gb|AEO97126.1| baseplate hub [Salmonella phage S16] >gi|408387124|gb|AFU64133.1| baseplate hub [Salmonella phage STML-198] + YP_007501227 + 577 + + + 1 + 675.626 + 1742 + 0 + 1 + 576 + 1 + 577 + 0 + 0 + 345 + 442 + 3 + 578 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPE--NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + MKTENMTSFRRRKVIADSKGERDAAAAASNQVESLDSIGYKLDSVQSATELTSEVIEQKSNDIISAVNDTTAGVELTAEFAENTSKTVRELTDVTSAISDKISKLTDMLEQKIQAVQQKFVDSSKVTDDTLKVIGDSIPEPVESNLPAIPEKIFDKPEENNS-PDADFFPTLPSKAEEVDNKKDSDKKILDTENLLKDLVGTTKTGFKATVSITDKISNMLFKYTVSALAESAKLAGTIFAIVLGIDLLRAHFKYWSDKFSSNFDEFSQSAGEWGSLLQSVLGSLQEIKKFWENNDWSGLAVAIVKGLADVLYNLSELMSLGISKISAAILSALGFDNAALSIKGAALEGFQARTGNELNEEDQDTLARYQTRRIQEGPDAFDKFSEYKTRAFDFITGRDNKNTTTTEQEREAEVKKLKSLPEEELNEINKKSNNARAALVRFEKYMGDVDPENATNIESLDKAYNNVKSLVNDSELNKAPAIKKELEVRLQKAEARYQKIKTESKPEPAAPSASEDVQKVQNIEKAEQAKKSDANQSSSSSVVNAQVNNVNNSRTIQTINPVTATPAPGVFKATGVN + MK+ENM++ RRRKVIADSKGERDAA+ AS+QV+SL+ IG KLD VQSA EL +EVIE+K N++I +V++ G EL AE +E T+++++ LT V S ISDK+SKL MLE K+QAV+QK +S L VI D +P+P E P +PE+I ++NN+ PD DFFP +P + E +NKKD K ++L DL+ TTK GFKAT+SITDKIS+MLFKYTV+ALAE+AK+A +FA+VLGIDLLR HFKYW+DKF SNFDEFS AGEWG LLQS+ G L +IKKFWE DWSGLAVAIVKGLADV+YNLSE+MSLGISKISA+IL ALGF+NAA +I+G+ALEGFQ RTGN L+E+DQ LA+YQ++RI+EGP DK E+KTRAFD++ GR+NK +T +R+ E + LK++ E+ E K N ARAA+ R EKY+GDVDPEN TN++SL+KAYN+ K ++DS ++ PA KKEL+ R Q+ E++YQK+K ++ P+PAAP+ SED Q+VQNI+KAE AK+ + +V N QVNNVNNS+TI + VTATPAPGVF ATGVN + + + + + 2 + gi|589889938|ref|YP_009005474.1| + baseplate hub subunit tail length determinator [Enterobacter phage PG7] >gi|583927851|gb|AHI61113.1| baseplate hub subunit tail length determinator [Enterobacter phage PG7] + YP_009005474 + 586 + + + 1 + 549.28 + 1414 + 0 + 1 + 576 + 1 + 586 + 0 + 0 + 297 + 414 + 20 + 591 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAE-------GTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPE---RILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDD--KKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANT-QVNNV-NNSKTIHQVQTVTATPAPGVFGATGVN + MKTENMKTMRR-KVIEEGRSERDAAKAASTQAESLSVLSSQLDDLQTQAELTSEVIEDKGNQVIDALNRVDQSIIDTTAGAELTAEASERTTEAVKQQTEVSNKISDKLSKLTELLNERLSAITPNLPQISV-PDTSLSVVEDAVPV--DIVTPGLPELLQELIPDPVNNTNNPNDAFFPTVPENPESDSKKGADEERKKKDSDTLSNLLKATKSGFKASMSITDRIAGMLFKYTVTAVIEAAKTAALLFSIVLGIDVIMKHFKYWSDKFTSDFDKFSAEAGEWGSTLSSIFGTLENIQKFWEAGDWSGLTVAIVKGVTEIIYNLSELISLGMSKVAAAILSIIPGLGDAALSVEGAALEGFQERTGNSLSKEDQDTLAKYQSSKIEKGENFFDKVSQGKTWIVNKITGDANISDFVTDEERESQNEKLRQMKPEEREQVLKKGNEARAAIVRFEKYMEQINPDDKRSVESADKAYANLQTQLNDTDLNNSPVTKKELSARMNIVTAKYDKLK-GKEPQPAPSSQSEDVKKVESIEKNKAAKEASLGTSAGAAAANLFNTNNVINNSRTINTVSPVTSTNAPGVFGATGVN + MK+ENM TMRR KVI + + ERDAA AS Q +SL ++ +LDD+Q+ EL +EVIE+KGN +ID+++ V + G EL AEASERTTE++K T V++ ISDKLSKL +L ++ A+ + + T LSV+ED +P + +PGLPE ++P +N N P++ FFP VP+ PE++ K ++ KK +D L +LLK TK GFKA++SITD+I+ MLFKYTVTA+ EAAK AA+LF++VLGID++ HFKYW+DKF S+FD+FSAEAGEWG L SIFG L +I+KFWEAGDWSGL VAIVKG+ ++IYNLSE++SLG+SK++A+IL + G +AA ++ G+ALEGFQERTGNSLS++DQ LAKYQS +IE+G DK + KT + + G N D +R+ + + L+ M PE+RE+ L K NEARAA+ R EKY+ ++P++ +++S +KAY + + ++D+ +++ P TKKEL R V +KY KLK P+PA + SED ++V++I+K + AKE S ++ AN NNV NNS+TI+ V VT+T APGVFGATGVN + + + + + 3 + gi|311993187|ref|YP_004010053.1| + gp29 base plate hub subunit, tail length determinator [Enterobacteria phage CC31] >gi|284178025|gb|ADB81691.1| gp29 base plate hub subunit, tail length determinator [Enterobacteria phage CC31] + YP_004010053 + 586 + + + 1 + 546.584 + 1407 + 0 + 1 + 576 + 1 + 586 + 0 + 0 + 296 + 412 + 22 + 592 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAE-------GTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPE---RILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDD--KKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQK---AENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + MKTENMKTMRR-KVIEEGRSERDAAKAASTQAESLSVLSSQLDDLQTQAELTSEVIEDKGNQVIDALNRVDQSIIDTTAGAELTAEASERTTEAVKQQTEVSNKISDKLSKLTELLNERLSAITPNLPQISV-PDTSLSVVEDAVPV--DIVTPGLPELLQELIPDPVNNTNNPNDAFFPTVPENPESDSKKGADEERKKKDSDTLSNLLKATKSGFKASMSITDRIAGMLFKYTVTAVIEAAKTAALLFSIVLGIDVIMKHFKYWSDKFTSDFDKFSAEAGEWGSTLSSIFGTLENIQKFWEAGDWSGLTVAIVKGVTEIIYNLSELISLGMSKVAAAILSLIPGLGDAALSVEGAALEGFQERTGNSLSKEDQDTLAKYQSSKIEKGENFFDKVSQGKTWIVNKITGDANISDFVTDEERTAQNEKLRQMKPEEREQVLKKGNEARAAIVRFEKYMEQINPDDKRSVQSADKAYANLQTQLNDTDLNNSPITKKELNARMNIVTAKYDKLK-GKEPQPAPSSQSEDVKKVESIEKNKAAEKASLGTGAGAAAANLFNTN-NVINNSRTINTVSPVTSTNAPGVFGATGVN + MK+ENM TMRR KVI + + ERDAA AS Q +SL ++ +LDD+Q+ EL +EVIE+KGN +ID+++ V + G EL AEASERTTE++K T V++ ISDKLSKL +L ++ A+ + + T LSV+ED +P + +PGLPE ++P +N N P++ FFP VP+ PE++ K ++ KK +D L +LLK TK GFKA++SITD+I+ MLFKYTVTA+ EAAK AA+LF++VLGID++ HFKYW+DKF S+FD+FSAEAGEWG L SIFG L +I+KFWEAGDWSGL VAIVKG+ ++IYNLSE++SLG+SK++A+IL + G +AA ++ G+ALEGFQERTGNSLS++DQ LAKYQS +IE+G DK + KT + + G N D +R + + L+ M PE+RE+ L K NEARAA+ R EKY+ ++P++ ++QS +KAY + + ++D+ +++ P TKKEL+ R V +KY KLK P+PA + SED ++V++I+K AE A + N+ NT N +NNS+TI+ V VT+T APGVFGATGVN + + + + + 4 + gi|422934607|ref|YP_007004568.1| + phage baseplate hub [Enterobacteria phage ime09] >gi|339791390|gb|AEK12447.1| phage baseplate hub [Enterobacteria phage ime09] + YP_007004568 + 590 + + + 1 + 447.588 + 1150 + 1.35305e-146 + 2 + 576 + 3 + 590 + 0 + 0 + 267 + 374 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKSTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSQAWDLFSTDFTKFSSETGTWGPLLQSIFSSIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNDDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKKD + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ + G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 5 + gi|228861124|ref|YP_002854147.1| + gp29 base plate hub [Enterobacteria phage RB51] >gi|227438798|gb|ACP31110.1| gp29 base plate hub [Enterobacteria phage RB51] >gi|291290410|dbj|BAI83205.1| baseplate hub subunit/tail length determinator [Enterobacteria phage AR1] + YP_002854147 + 590 + + + 1 + 442.965 + 1138 + 9.14277e-145 + 2 + 576 + 3 + 590 + 0 + 0 + 264 + 378 + 49 + 606 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP----DPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTG----TSLAVVENAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPIEPKQESPEEKQKRDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMVALIMAVVIGIDLLMVHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDEIKKFWEAGDWGGLTVAIVEGLGSVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNDDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSIEAAHEDLKKRMNDPDLNNSPAVKKELASRFAKIDATYQELKK-NQPEAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G T L+V+E+ +P + D ES G +LP + NN PD DFFP P P EP E+ ++ QK+D + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM A++ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ + G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E A+ KK ++D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN + + + + + 6 + gi|422934972|ref|YP_007004932.1| + baseplate hub subunit tail length determinator [Escherichia phage wV7] >gi|343177526|gb|AEM00852.1| baseplate hub subunit tail length determinator [Escherichia phage wV7] + YP_007004932 + 590 + + + 1 + 442.58 + 1137 + 1.58375e-144 + 2 + 576 + 3 + 590 + 0 + 0 + 263 + 378 + 49 + 606 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP----DPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTG----TSLAVVENAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPIEPKQESPEEKQKRDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMVALIMAVVIGIDLLMVHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDEIKKFWEAGDWGGLTVAIIEGLGSVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNDDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSIEAAHEDLKKRMNDPDLNNSPAVKKELASRFAKIDATYQELKK-NQPEAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G T L+V+E+ +P + D ES G +LP + NN PD DFFP P P EP E+ ++ QK+D + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM A++ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAI++GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ + G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E A+ KK ++D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN + + + + + 7 + gi|604671901|gb|AHV82895.1| + baseplate hub subunit, tail length determinator [Escherichia phage vB_EcoM_PhAPEC2] + AHV82895 + 590 + + + 1 + 441.425 + 1134 + 3.83095e-144 + 1 + 576 + 1 + 590 + 0 + 0 + 269 + 375 + 30 + 598 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSV-------DNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP-DPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKD-DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMS-------NFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF----KTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKE-DNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN + MKPEEMKSMRRNKVIADNKPQKVAATAATDSLEALNNISSKLDDVQAASELTSQSVEDKGNGIIESIGDLKNSTDNTAEGTELIAEVIEKQTEVTKSINEVSSAISSKLDRLATLLEQKLQ-TSTAIQNTGG---TSLEVIENAIPVKVVENETSDELFKALPTPEKIDNKPDEDFFPVPVQESANSTSDSKGGISFKLSDKIAMLTKTVQTGFNKSISISDRIAGMLFKYTITAAIEAAKMAALILGIVIGIDLLIVHFKYWTDKFTSAWDLFDENFTKFSDEAKEWGKFLSDIFTSIDSIKQLWEAGDWGGLTVAIVKGVGTALMNLGELIQLGMAKLSASILRAIGFGDTADEIEGRALEGFQETTGNKLKKEDQEKVAKYQMKRDDGELGTVSKGLDMLQRGKTFVTNWVRGNDNKEEFSTSDERAAESAKLKELPEEERKEAYIKANETRAALVRFEDYIDKIDMTNPENAKNVEKSYADLSKLIKDPELNKTPVVKKELDARFEKLNNKMAEAKKAQTTVKPESSSKSPEAKQVQSIEKGRAS--ESKQQQPVAAISNT--NNVVKKNTVVQNMTPVTSTTAPGIFHATGVN + MK E M +MRR KVIAD+K ++ AA+ A+D +++L I KLDDVQ+A+EL ++ +E+KGN +I+S+ DN AEGTEL AE E+ TE K++ V+S IS KL +LA++LE K+Q +Q +G T L VIE+ +P E E+ + LP + +N PDEDFFP QE N+ D K K +D + L KT + GF +ISI+D+I+ MLFKYT+TA EAAKMAA++ +V+GIDLL +HFKYWTDKF S NF +FS EA EWG L IF + IK+ WEAGDW GL VAIVKG+ + NL E++ LG++K+SASIL A+GF + A I G ALEGFQE TGN L ++DQ+ +AKYQ KR + G + K + KT +WV G +NK + + + +R E+ LK + E+R+E IK NE RAA+ R E YI +D NP N +++EK+Y K I D ++ P KKELD RF+++ +K + K+ T KP + + S + ++VQ+I+K + +SK+ ++NT NNV T+ Q T VT+T APG+F ATGVN + + + + + 8 + gi|32453687|ref|NP_861896.1| + gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage RB69] >gi|32350506|gb|AAP76105.1| gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage RB69] + NP_861896 + 590 + + + 1 + 441.425 + 1134 + 4.26665e-144 + 1 + 576 + 1 + 590 + 0 + 0 + 270 + 376 + 34 + 600 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSV-------DNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP-DPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKD-DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMS-------NFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF----KTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKE-DNTPKPAAPATSEDNQRVQNIQK--AENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN + MKPEEMKSMRRNKVIADNKPQKVAATAATDSLEALNNISSKLDDVQAASELTSQSVEDKGNGIIESIGDLKNSTDNTAEGTELIAEVIEKQTEVTKSINEVSSAISSKLDRLATLLEQKLQ-TSTAIQNTGG---TSLEVIENAIPVKVVENETSDELFKAFPTPEKIDNKPDEDFFPTPVQESANSTSDSKGGISFKLSDKIAMLTKTVQTGFNKSISISDRIAGMLFKYTITAAIEAAKMAALILGIVIGIDLLIVHFKYWTDKFTSAWDLFDENFTKFSDEAKEWGKFLSDIFTSIDSIKQLWEAGDWGGLTVAIVKGVGTALMNLGELIQLGMAKLSASILRAIGFGDTADEIEGRALEGFQETTGNKLKKEDQEKVAKYQMKRDDGELGTVSKGLDMLQRGKTFVTNWVRGNDNKEEFSTSDERAAESAKLKELPEEERKEAYIKANETRAALVRFEDYIDKIDMTNPENAKNVEKSYADLSKLIKDPELNKTPVVKKELDARFEKLNNKMAEAKKAQTTVKPESSSKSPEAKQVQSIEKGRASESKQQQPVAT----ISNT--NNVVKKNTVVQNMTPVTSTTAPGIFHATGVN + MK E M +MRR KVIAD+K ++ AA+ A+D +++L I KLDDVQ+A+EL ++ +E+KGN +I+S+ DN AEGTEL AE E+ TE K++ V+S IS KL +LA++LE K+Q +Q +G T L VIE+ +P E E+ + P + +N PDEDFFP QE N+ D K K +D + L KT + GF +ISI+D+I+ MLFKYT+TA EAAKMAA++ +V+GIDLL +HFKYWTDKF S NF +FS EA EWG L IF + IK+ WEAGDW GL VAIVKG+ + NL E++ LG++K+SASIL A+GF + A I G ALEGFQE TGN L ++DQ+ +AKYQ KR + G + K + KT +WV G +NK + + + +R E+ LK + E+R+E IK NE RAA+ R E YI +D NP N +++EK+Y K I D ++ P KKELD RF+++ +K + K+ T KP + + S + ++VQ+I+K A +K+Q +T ++NT NNV T+ Q T VT+T APG+F ATGVN + + + + + 9 + gi|642905806|ref|YP_009037575.1| + baseplate hub subunit, tail length determinator [Escherichia phage vB_EcoM_JS09] >gi|642903960|gb|AIA79980.1| baseplate hub subunit, tail length determinator [Escherichia phage vB_EcoM_JS09] + YP_009037575 + 590 + + + 1 + 441.039 + 1133 + 6.28771e-144 + 1 + 576 + 1 + 590 + 0 + 0 + 267 + 375 + 30 + 598 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSV-------DNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP-DPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKD-DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMS-------NFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF----KTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKE-DNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN + MKPEEMKSMRRNKVIADNKPQKVAATAATDSLEALNDISSKLDDVQAASELTSQSVEDKGNGIIESIGDLKNSTDNTAEGTELIAEVIEKQTEVTKSINEVSSAISSKLDRLATLLEQKLQ-TSTAIQNTGG---TSLEVIENAIPVKVVENETSDELFKAFPTPEKIDNKPDEDFFPAPVQESANSTSDSKGGISFKLSDKIAMLTKTVQTGFNKSISISDRIAGMLFKYTITAAIEAAKLAALILGIVIGIDLLIVHFKYWTDKFTSAWDLFDENFTKFSDEAKEWGKFLSDIFTSIDSIKQLWEAGDWGGLTVAIVKGVGTALMNLGELIQLGMAKLSASILRAIGFGDTADEIEGRALEGFQETTGNTLKKEDQEKVAKYQMKRDDGELGTVSKGLDMLQRGKTFVTNWVRGNDNKEEFSTSDERAAESAKLKELPEEERKEAYIKANETRAALVRFEDYIDKIDMTNPENAKNVEKSYADLSKLIKDPELNKTPVVKKELDARFEKLNNKMAEAKKAQTTVKPESSSKSPEAKQVQSIEKGRAS--ESKQQQPVAAISNT--NNVVKKNTVVQNMTPVTSTTAPGIFHATGVN + MK E M +MRR KVIAD+K ++ AA+ A+D +++L I KLDDVQ+A+EL ++ +E+KGN +I+S+ DN AEGTEL AE E+ TE K++ V+S IS KL +LA++LE K+Q +Q +G T L VIE+ +P E E+ + P + +N PDEDFFP QE N+ D K K +D + L KT + GF +ISI+D+I+ MLFKYT+TA EAAK+AA++ +V+GIDLL +HFKYWTDKF S NF +FS EA EWG L IF + IK+ WEAGDW GL VAIVKG+ + NL E++ LG++K+SASIL A+GF + A I G ALEGFQE TGN+L ++DQ+ +AKYQ KR + G + K + KT +WV G +NK + + + +R E+ LK + E+R+E IK NE RAA+ R E YI +D NP N +++EK+Y K I D ++ P KKELD RF+++ +K + K+ T KP + + S + ++VQ+I+K + +SK+ ++NT NNV T+ Q T VT+T APG+F ATGVN + + + + + 10 + gi|228861505|ref|YP_002854526.1| + gp29 base plate hub [Enterobacteria phage RB14] >gi|227438521|gb|ACP30834.1| gp29 base plate hub [Enterobacteria phage RB14] + YP_002854526 + 590 + + + 1 + 438.343 + 1126 + 7.24825e-143 + 2 + 576 + 3 + 590 + 0 + 0 + 263 + 371 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTAAIVEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL AIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN + + + + + 11 + gi|414086558|ref|YP_006986747.1| + baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM_ACG-C40] >gi|383396339|gb|AFH20155.1| baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM_ACG-C40] + YP_006986747 + 590 + + + 1 + 437.958 + 1125 + 8.89384e-143 + 2 + 576 + 3 + 590 + 0 + 0 + 263 + 372 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPVQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLAVVESAIPVKVVEDDTAEFVG---PLLPAPEAVNNDPDADFFPAPQPVEPKRESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMVALIMAVVIGIDLLMVHFKYWSDKFSKAWDLFSTDFKTFSSETGTWGPLLQSIFESIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSIEAAHEDLKKRMNDPDLNNSPAVKKELASRFAKIDATYQELKK-NQPEAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S + S I K+ + D E G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM A++ A+V+GIDLL +HFKYW+DKF ++F FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E A+ KK ++D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN + + + + + 12 + gi|9632606|ref|NP_049805.1| + gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage T4] >gi|137988|sp|P13337.1|VG29_BPT4 RecName: Full=Tail-tube assembly protein Gp29; AltName: Full=Folylpolyglutamate synthase; AltName: Full=Tail length regulator; AltName: Full=Tetrahydrofolylpolyglutamate synthase [Enterobacteria phage T4] >gi|5354230|gb|AAD42437.1|AF158101_24 gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage T4] >gi|215946|gb|AAA32538.1| tail-tube assembly protein [Enterobacteria phage T4] + NP_049805 + 590 + + + 1 + 437.573 + 1124 + 1.07961e-142 + 2 + 576 + 3 + 590 + 0 + 0 + 264 + 372 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTSAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMIHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTVAIVEGLGKVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAEGLDKISNWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV + SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL IHFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL VAIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 13 + gi|525334458|gb|AGR46140.1| + baseplate hub subunit [Yersinia phage PST] + AGR46140 + 590 + + + 1 + 437.187 + 1123 + 1.95194e-142 + 2 + 576 + 3 + 590 + 0 + 0 + 267 + 373 + 47 + 605 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNV-------AEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVEGAVSDTTAGSELIAETVEIGNNINKE---IGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTVAIIEGLGKVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV G+EL AE E K + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKKD + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL VAI++GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 14 + gi|299780553|gb|ADJ39915.1| + baseplate hub subunit tail length determinator [Enterobacteria phage T4T] + ADJ39915 + 590 + + + 1 + 437.187 + 1123 + 2.03785e-142 + 2 + 576 + 3 + 590 + 0 + 0 + 264 + 371 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMIHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTVAIVEGLGKVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAEGLDKISNWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL IHFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL VAIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 15 + gi|330858710|ref|YP_004415085.1| + putative baseplate hub subunit and tail length determinator [Shigella phage Shfl2] >gi|327397644|gb|AEA73146.1| putative baseplate hub subunit and tail length determinator [Shigella phage Shfl2] + YP_004415085 + 590 + + + 1 + 424.091 + 1089 + 1.93327e-137 + 2 + 576 + 3 + 590 + 0 + 0 + 261 + 368 + 33 + 598 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTAAIVEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNTTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK--NKAQQAPVQQASPSINNTNNVVKKNTVV-HNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL AIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K N +Q+ ++ NT N+ H + VT+T APGVF ATGVN + + + + + 16 + gi|397134209|gb|AFO10716.1| + baseplate hub protein [Escherichia phage ECML-134] + AFO10716 + 590 + + + 1 + 421.009 + 1081 + 3.75934e-136 + 2 + 576 + 3 + 590 + 0 + 0 + 263 + 373 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISISDKISSMLFKYTISAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFSSIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLSKEDQEKVANYQDKRMNGDLGPIAEGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEQYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISI+DKISSMLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SLS++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R E+Y D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 17 + gi|116326412|ref|YP_803132.1| + base plate hub [Enterobacteria phage RB32] >gi|115344005|gb|ABI95014.1| base plate hub [Enterobacteria phage RB32] + YP_803132 + 590 + + + 1 + 407.527 + 1046 + 5.49342e-131 + 2 + 576 + 3 + 590 + 0 + 0 + 261 + 372 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPAPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISISDKISSMLFKYTISAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNTTNASLSKEDQEKVANYQYKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAEEEEKLKQLSPEEAKIALMKANEARAAMNRFDQYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISI+DKISSMLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ T SLS++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R +E + LK ++PE+ + L+K NEARAA+ R ++Y D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 18 + gi|639438842|ref|YP_009030799.1| + baseplate hub subunit tail length determinator [Escherichia phage e11/2] >gi|628971670|gb|AHY83392.1| baseplate hub subunit tail length determinator [Escherichia phage e11/2] + YP_009030799 + 590 + + + 1 + 399.823 + 1026 + 4.84152e-128 + 2 + 576 + 3 + 590 + 0 + 0 + 255 + 369 + 41 + 602 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIGNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISISDKISSMLFKYTISAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFSSIDKIQQFWEKGDWGGLTAAIIEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNTTGASLNKEDQEKVANYQYKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTSDEERAEEEEKLKQLSPEEAKIALMKANEARAAMNRFEKYADSADMSKDSTVKSVESAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++ NV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISI+DKISSMLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + I++FWE GDW GL AI++GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R +E + LK ++PE+ + L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 19 + gi|398313740|emb|CCI89087.1| + phage baseplate hub [Yersinia phage phiD1] + CCI89087 + 369 + + + 1 + 308.531 + 789 + 1.22596e-95 + 218 + 576 + 1 + 369 + 0 + 0 + 169 + 239 + 26 + 377 + MLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + MLFKYTISAAIEAAKMTAMILAVVIGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTAAIVEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN + MLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL AIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN + + + + + 20 + gi|431809132|ref|YP_007236029.1| + phage baseplate hub [Yersinia phage phiR1-RT] >gi|398313421|emb|CCI88770.1| phage baseplate hub [Yersinia phage phiR1-RT] + YP_007236029 + 582 + + + 1 + 298.516 + 763 + 2.81533e-89 + 1 + 576 + 1 + 582 + 0 + 0 + 217 + 334 + 46 + 602 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLID-------SVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDE---PE---SPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPT--DMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRI--EEGPGIIDKAGEFKTRAFDWVL--GRENKIDSTQASDRDQ--ETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKY--QKLKEDNTPKPAAPATSEDNQRVQNIQK-AENAKEQSKKSTGDMNVANT--QVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + MKQPSQQNSFRRKVIEDSKPERDAASAANSQSTSLDSIDSKLSDVQAASELTSEVVEAKTDQLIDTIGQLKGSVQDVQAASELAVDAIGDSNSYLKSIDTVSQAINAKLAQLTSMLEAKFG--DQLAPLNAPNPVSG------ALPEPVPVVLPEDFIGPMLP--TVPDTDPNEEVLPEPPRREPEPKSEEDKKSSSEGDEKNTISEKLDLLIRTTQSGFKTAVGYSDKISNMLFKFTLTAIAQAAKTAAMILGIILAIDVIKANFTFWAEKFSTNFTEFAERAKEWGPLIESVVGMVRNISDAWNSDDPLGIIKAIAFGLSDITKQLADLLGLAVAKLTAGILRALGFNDKADALEGSYLKGYQDRTGSVMSEGHQKLIAKADNQKIKDEHDTTAYDQFKGMDQRGYDQAYKNGSMSK-DTYEALSKGEAKASDPLQGLSEEERLNVIIKRNEAQAAINRTKDYSTKIDPNNEREVNSLNKALADIKSRLDDPEISKIPESKSDLTRQFNELNNKTSANKLK---------PAPIAENQEVQTTKRVAELQKQNDTQSVNKGPTQNTVVQANTTNTSRTMYNMPPTTNIPAPGMRAALGTN + MK + RRKVI DSK ERDAAS A+ Q SL+ I KL DVQ+A+EL +EV+E K + LID SV +V +ELA +A + +K++ V+ I+ KL++L SMLE+K +Q + + +G LP+P PE P LP +P D N + E + E +KK + D+K T + L L++TT+ GFK + +DKIS+MLFK+T+TA+A+AAK AAM+ ++L ID+++ +F +W +KF +NF EF+ A EWG L++S+ GM+ +I W + D G+ AI GL+D+ L++++ L ++K++A IL ALGF + A + GS L+G+Q+RTG+ +SE QK +AK +++I E D+ R +D G +K D+ +A + + + L+ ++ E+R +IK+NEA+AA+ R + Y +DP N + SL KA K + D IS P +K +L ++F + +K KLK PA +NQ VQ ++ AE K+ +S NT Q N N S+T++ + T PAPG+ A G N + + + + + 21 + gi|422934216|ref|YP_007004252.1| + baseplate hub subunit [Enterobacteria phage Bp7] >gi|345450725|gb|AEN93928.1| baseplate hub subunit [Enterobacteria phage Bp7] + YP_007004252 + 578 + + + 1 + 269.24 + 687 + 3.573e-78 + 1 + 576 + 1 + 578 + 0 + 0 + 204 + 331 + 54 + 604 + MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKP-TDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNISDVLSDSQAASELLSEVVETKSNQIISSVDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVVEDILPPED---NKPDAEFMP----EPPKNSDEGKEGDKTSLSDKIEALTKITEKGFKASIGVADRISGMLFKYTITAAAEAAKLAAGLVLLIFGIDAIRVYFQYFMDQFESGWKEFNDKFKEWGPLLEGLMTWAKNAEAMFSEGNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGELAENVEASALMSYQQNTGATLDVEDQTKVAKYHDRRSAEALETAEKMNKKYKDKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENAKAFKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN + MK+E N ++ RR K+I + +R A + A Q D L I L D Q+A+EL++EV+E K N +I SVD +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F P EP N + K+ DK +D + L K T+ GFKA+I + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F S + EF+ + EWG LL+ + + + + G+W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G A + SAL +Q+ TG +L +DQ +AKY +R E P +I++A ++ L +E + D +A D ++L E+R E K+++A+A + RL + ++ + ++++ + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN + + + + + 22 + gi|314121771|ref|YP_004063890.1| + gp29 baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM-VR7] >gi|313151528|gb|ADR32584.1| gp29 baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM-VR7] + YP_004063890 + 581 + + + 1 + 269.24 + 687 + 3.63307e-78 + 2 + 576 + 3 + 581 + 0 + 0 + 186 + 328 + 58 + 606 + KSENMSTMRR----RKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KNSEQTSFRRGGPNKKLIEELAPQRRAEALSAEQNDELSNLNTTLTNTQAATELVSEAIEDKGNQIIENIQTNNGVLQDISAGVELTAEATEKTQQGIKNLTDI---LSDKLDKLSAMISGKIGVT------SPVAGSESLKPVEDALPEPEENKPTASVPALIPPEEQK---PDADFIPE-PEQPKTDAEGKETNTWSLGDKLDTLSKITEKGFKASISVADRISGMLFKYTITAAAEAAKLIGGLLLLVFGIDAIRVYFQYFMKQFEKGWAEFNDKFKEWGPLLEGLMTWAKNAEAMFSERNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLADNVEASALMSYQQNTGATLDDEDQTKIAKYHDKRSAEAMKTAEKMNKKYKDKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLDYFKKRDKTQADIIRLTQTADNLMKPDATDKKNAEASYKAIQEQLADPVMAKGGAPKDLNMHALLEKLDKSLEKFKDEPKVKPPDVKASPDAQQAAKVDEGMKAKENKYKDAP----ANAQINTVNNIQKTSRTQYNMPPQSSTPAPGMRQATRIN + K+ ++ RR +K+I + +R A + +++Q D L + L + Q+A ELV+E IE+KGN +I+++ +++ G EL AEA+E+T + IK LT + +SDKL KL++M+ K+ S + S L +ED LP+P+E + ++PP + PD DF P P++P+ + + ++ + D L L K T+ GFKA+IS+ D+IS MLFKYT+TA AEAAK+ L LV GID +R++F+Y+ +F + EF+ + EWG LL+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY KR E P +I++A ++ L +E + D +A D ++L E+R + K+++ +A + RL + ++ + T+ ++ E +Y + ++ ++D ++ A K + ++++ +K K++ KP S D Q+ + + AKE K AN Q+N VNN S+T + + ++TPAPG+ AT +N + + + + + 23 + gi|299779140|ref|YP_003734334.1| + 29 gene product [Enterobacteria phage IME08] >gi|298105869|gb|ADI55513.1| gp29 baseplate hub subunit [Enterobacteria phage IME08] + YP_003734334 + 578 + + + 1 + 266.929 + 681 + 2.99001e-77 + 1 + 576 + 1 + 578 + 0 + 0 + 203 + 335 + 56 + 605 + MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKP-TDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNS-AKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNISDVLSDSQAASELLSEVVETKSNQIISSVDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVVEDILPPED---NKPDAEFVP----EPPKNSDEGKEGAKSPLSEKIEALTKITEKGFKASVGVADRISGMLFKYTITAAAEAAKLAAGLVLLIFGIDAIRVYFQYFMDQFEAGWKEFNDKFKEWGPLLEGLMTWAKNAEAMFSEGNWLGLAEAIIRGMVNLTKNMAQLLMVGISKLISAILSKIPGMGELAENVEASALMSYQQNTGATLDDEDQTKVAKYHDRRSAEALETAEKMNKKYKNKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENA-KAYKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN + MK+E N ++ RR K+I + +R A + A Q D L I L D Q+A+EL++EV+E K N +I SVD +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F P EP N + K+ K P ++ + L K T+ GFKA++ + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F + + EF+ + EWG LL+ + + + + G+W GLA AI++G+ ++ N+++++ +GISK+ ++IL + G A + SAL +Q+ TG +L ++DQ +AKY +R E P +I++A ++ L +E + D +A D ++L E+R E K+++A+A + RL + ++ + ++++ KAY + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN + + + + + 24 + gi|308814556|ref|YP_003934830.1| + baseplate hub subunit tail length determinator [Shigella phage SP18] >gi|308206148|gb|ADO19547.1| baseplate hub subunit tail length determinator [Shigella phage SP18] + YP_003934830 + 581 + + + 1 + 265.388 + 677 + 1.10381e-76 + 2 + 576 + 3 + 581 + 0 + 0 + 188 + 331 + 60 + 607 + KSENMSTMRR----RKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKR--FQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN + KNSEQTSFRRGGPNKKLIEELAPQRRAEALSAEQNDELSNLNTTLTNTQAATELVSEAIEDKGNQIIENIQTNNGVLQDISAGVELTAEATEKTQQGIKNLTDI---LSDKLDKLSAMISGKLGVT------SPVAGSESLKPVEDALPEPEENKPTASVPTLIPPEEQK---PDADFIPE-PEQPKTDAEGKETNTWSLGDKLDTLSKITEKGFKASISVADRISGMLFKYTITAAAEAAKLIGGLLLLVFGIDAIRVYFQYFMKQFEKGWAEFNDKFKEWGPLLEGLMTWAKNAQAMFSEKNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLADNVEASALMSYQQNTGATLDDEDQTKIAKYHDKRSAEAMEATEKMNKKYKDKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLDYFKKRDKAQADIIRLTQTADNLMKPDATDKKNAMEMRANIEKQLADPSMAKGGAP-KDLNMRALLEKLDKSLEKFKDEPKVKPPDVKTSPDAQQAAKVDEGMKAKENKYKDAP----AQAQINTVNNIQKTSRTQYNMPPQSSTPAPGMRQATRIN + K+ ++ RR +K+I + +R A + +++Q D L + L + Q+A ELV+E IE+KGN +I+++ +++ G EL AEA+E+T + IK LT + +SDKL KL++M+ K+ S + S L +ED LP+P+E + ++PP + PD DF P P++P+ + + ++ + D L L K T+ GFKA+IS+ D+IS MLFKYT+TA AEAAK+ L LV GID +R++F+Y+ +F + EF+ + EWG LL+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY KR E P +I++A ++ L +E + D +A D ++L E+R + K+++A+A + RL + ++ + T+ ++ + + +K ++D +++ A K+L+ R ++++ +K K++ KP TS D Q+ + + AKE K A Q+N VNN S+T + + ++TPAPG+ AT +N + + + + + 25 + gi|238695345|ref|YP_002922538.1| + gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage JS10] >gi|220029481|gb|ACL78415.1| gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage JS10] + YP_002922538 + 578 + + + 1 + 262.692 + 670 + 1.03696e-75 + 1 + 576 + 1 + 578 + 0 + 0 + 198 + 334 + 52 + 603 + MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNITEALSETQAASELLSEVVETKSNQIINSIDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVIEDILPPED---NKPDAEF---VPEPPKNSDEGKEGDKSSLSDKIEALTKITEKGFKASIGVADRISGMLFKYTITAAAEAAKLAAGLALLIFGIDAIRVYFQYFMDQFNEGWKKFNDKFKEWGPLLEGLMTWAKNAEAMFSERNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLAENVEASALMSYQQNTGATLDDEDQTKVAKYHDRRSAEALETAEKMNKKYKGKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRNLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENAKAFKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN + MK+E N ++ RR K+I + +R A + A Q D L I L + Q+A+EL++EV+E K N +I+S+D +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F VP+ P+N+ + ++ D +D + L K T+ GFKA+I + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F + +F+ + EWG LL+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY +R E P +I++A ++ L +E + D +A D +NL E+R E K+++A+A + RL + ++ + ++++ + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN + + + + + 26 + gi|161622623|ref|YP_001595318.1| + gp29 baseplate hub subunit tail length determinator [Enterobacteria phage JS98] >gi|52139948|gb|AAU29318.1| gp29 baseplate hub subunit tail length determinator [Enterobacteria phage JS98] + YP_001595318 + 578 + + + 1 + 259.225 + 661 + 1.72858e-74 + 1 + 576 + 1 + 578 + 0 + 0 + 196 + 334 + 52 + 603 + MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNITEALSETQAASELLSEVVETKSNQIINSIDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVIEDILPPED---NKPDAEF---VPEPPKNSDEGKEGDKSSLSDKIEALTKITEKGFKASIGVADRISGMLFKYTITAAAEAAKLAAGLALLIFGIDAIRVYFQYFMDQFNEGWKKFNDKFKEWGPVLEGLMTWAKNAEAMFSERNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLAENVEASALMSYQQNTGATLDDEDQTKVAKYHDRRSAEALETAEKMNKKYKGKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENAKAFKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN + MK+E N ++ RR K+I + +R A + A Q D L I L + Q+A+EL++EV+E K N +I+S+D +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F VP+ P+N+ + ++ D +D + L K T+ GFKA+I + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F + +F+ + EWG +L+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY +R E P +I++A ++ L +E + D +A D ++L E+R E K+++A+A + RL + ++ + ++++ + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN + + + + + 27 + gi|311992691|ref|YP_004009559.1| + gp29 baseplate hub subunit [Acinetobacter phage Ac42] >gi|298684474|gb|ADI96435.1| gp29 baseplate hub subunit [Acinetobacter phage Ac42] + YP_004009559 + 569 + + + 1 + 227.639 + 579 + 7.65187e-63 + 1 + 576 + 1 + 569 + 0 + 0 + 183 + 306 + 91 + 618 + MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLEL---------IGLKLDDVQSANELVAEVIE------EKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDE--PESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTT-KGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGE------------WGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGI----SKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGP-----GIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPAT-SEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNN--VNNSKTIHQVQTVTATPAPGVFGATGVN + MAQQSLKSEVRDRVLAKSASLRDARKQIIDKANSQTLKPQESPQEAVQTPIDDLSPVSSTMSQALQQSSTSNEIGRASLDELHNISESSKL---------------------INQRLQKLSTLLESKFVNAETKPVELNERA---VDVIKDYVEKPEQKVPEPNPIP-KLLPGIEYTSSLGD-------TKDDQSKTVDQKE---KREDANGTGVKSILKTGFGKTVSVIDRISGFLFKYTLSAAIASAKIVGGLFALILGFDLLRIHFKYWGEKLMEKFDQISDWFGENISAPFNALLERWTPVFESIMDSVGFVKRAWENGDWG----ALISGIGSAIDTATTSLLVGIQSALAKLGAAILDKLGFKDAADNLEGAAIQNKQNHTDAVLSDKEKIALAEYQKKNIEKGEAPSRGGITSFLPDSWRKNLDLITEQ----DYNQIKAEEKDMGRLKSMSSDDQTKVLIKNNEAKDALDRYAEAGRKLDVNNEQDKARLNKLYNEASTRVKDKDLSNTPEVQKHLEGRLERIKNSINAKKVKVEPAPSNESKDATTASRIQAIDSKKNS------SAGNGNASNTNVQNNIVKSNRQINIQAPVTSSNAPGIFKATSAN + M +++ + R +V+A S RDA D+ +S L + +DD+ + +++ ++ E G +D + N++E ++L I+ +L KL+++LESK E K E A + VI+D + P++ PE +P ++LP ++ ++L D ++ ++ DQK+ K D G +K+ K GF T+S+ D+IS LFKYT++A +AK+ LFAL+LG DLLRIHFKYW +K M FD+ S GE W + +SI +G +K+ WE GDW A++ G+ I + + +GI +K+ A+ILD LGF++AA + G+A++ Q T LS+ ++ ALA+YQ K IE+G GI + + D + + D Q +++ LK+M+ + + + LIK NEA+ A+ R + +D N + L K YN A + D +S+ P +K L+ R +R+++ K P P+ + + R+Q I +N+ S G+ N +NT V N V +++ I+ VT++ APG+F AT N + + + + + 28 + gi|639438514|ref|YP_009030254.1| + baseplate hub subunit, tail length determinator [Serratia phage PS2] >gi|625370587|gb|AHY25447.1| baseplate hub subunit, tail length determinator [Serratia phage PS2] + YP_009030254 + 572 + + + 1 + 211.46 + 537 + 6.69261e-57 + 42 + 570 + 35 + 566 + 0 + 0 + 158 + 276 + 33 + 547 + LDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDP-DEPESPGLPERILP-PL-DDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDD-QKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGREN------KIDSTQAS--DRDQETQNLKAMAPEK----REETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKY-QKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF + LDDIVEANELIADRVEDNTNRSVAAQEDSTAATELVAENTEHGNKHLSNIADTARQISSKLSEFADRLNSKIEASVQSGLPAIGNQATAIQAIEEQINTPLNEEVLADAIEKLLPMPVKSETDVFPEPEKPKEPEQNPQEDKREEERKDKEKSQASEKILSAVKGGFKSTYGLLNNIAGSLFKYTITAAANMLKWAGIMFAIVFAIDLIRVHFKYWQKVFEKSLDELNEQVGAWGPILTDIFNTAQEMRDYWAKGQYGDLVTSLVQGIGRTLLDLGHMIMFGIGKAIASMLDAIPGMSETAKKVEGRAIRTYSEQTGYVPDEEERQKVIAVEKYDQGQQYKDLKDEANKYTEDQFVKKTGNRGFLNDGISLNETQARQIHKDIRSGKLKDSDIEKEIGIQADLAMRMNTIENRVQRTSG--------SPSTNAELMDNLSKLAKDIGNADI--QSYMKEPLQERVQKMESALAERTKPKVTPKPAAE--SAEATQVKEVEATIKPKETASTNAG---TTLNNINNVRNSRTVVQVQPRSSIPSGGIM + LDD+ ANEL+A+ +E+ N + + ++ TEL AE +E + + + A IS KLS+ A L SK++A Q + + +T + IE+++ P +E E++LP P+ + + P+ + Q P+ +K+++++ DK+ + +L KGGFK+T + + I+ LFKYT+TA A K A ++FA+V IDL+R+HFKYW F + DE + + G WG +L IF +++ +W G + L ++V+G+ + +L ++ GI K AS+LDA+ G A + G A+ + E+TG E++ QK +A + + ++ + D+A ++ F G ++ TQA +D + LK EK + + ++ N VQR +P+ L + K I ++ I Q K+ L +R Q++ES ++ K TPKPAA S + +V+ ++ KE + + G +NNV NS+T+ QVQ ++ P+ G+ + + + + + 29 + gi|238695064|ref|YP_002922258.1| + tail length regulator [Enterobacteria phage JSE] >gi|220029200|gb|ACL78135.1| tail length regulator [Enterobacteria phage JSE] + YP_002922258 + 577 + + + 1 + 204.527 + 519 + 2.33408e-54 + 22 + 570 + 13 + 572 + 0 + 0 + 167 + 299 + 83 + 596 + RDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDN-------VAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQE-PE-NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIY----NLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF-----KTRAFDWVLGR--ENKIDSTQASD--RDQETQNLKAMAPEKREETLIK------QNEARAAVQRL---------------EKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDN----QRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF + KEAEENPIDKLNKLDKLN-SIDNLQAATELVAETVEQKSNEVVGAVEDNTAANELTAENTQSTAGNTQKTYEELQKLNNFSSQMNEKLRGFGVMMERRFGVV--------SKMASGIGAIEEALKKPEQPQTMPSPQPVLPTVPEQ---PNNDNYQGLPKKKPDADDRKKKNATDKRNADSMENLLKVVRGGFKETIGISNKVLGMLFKITLTAMAEAAKWGAILMGIVFVIDTLMVHFRYWSDLFETKFNEFMDKAGGWAGPISDILTTVRQVRDYWSKGEYGELIKSLVMGIGDAFYKTFIQLDRIITTGIAKILRMI---PGMGDYADKLEYGALKSAVAQ-GYTPNERELELMDKVESEHEE------DKYGERTGWTGKARDIGEAIGESIKDKVNEGLVSLGWRDQ-----KDVDAEKRQEELKRGEYKSVSAEQRSASRKLRIKSEGAINNINEVMENLSGDYDKE---RMGELKKDIDVYREQVQDPTLVE--SDRSQLERLIEKFDEMYADKTKGVVPTKSVPATETETAKQAERTEQMQKQAAIQQQTTNQTS--NVNNTQI--VTNNRTIKQGAPTTRIDAPGTI + ++A D+++ L+ + +D++Q+A ELVAE +E+K N ++ +V++ AE T+ A +++T E ++ L +S +++KL M+E + V + ++G+ IE+ L P++P++ P+ +LP + + P+ D + +P++ P+ +++K + DK+ D + +LLK +GGFK TI I++K+ MLFK T+TA+AEAAK A+L +V ID L +HF+YW+D F + F+EF +AG W G + I + ++ +W G++ L ++V G+ D Y L I++ GI+KI I G + A + AL+ + G + +E + + + K +S+ E DK GE K R +G ++K++ S RDQ K + EKR+E L + E R+A ++L E GD D E M L+K + ++ + D + + + + +L++ ++ + Y + P + PAT + +R + +QK ++Q+ T NV NTQ+ V N++TI Q T APG + + + + + 30 + gi|157311483|ref|YP_001469526.1| + gp29 baseplate hub subunit tail length determinator [Enterobacteria phage Phi1] >gi|149380687|gb|ABR24692.1| gp29 baseplate hub subunit tail length determinator [Enterobacteria phage Phi1] + YP_001469526 + 577 + + + 1 + 200.675 + 509 + 5.33273e-53 + 42 + 570 + 32 + 572 + 0 + 0 + 163 + 286 + 82 + 576 + LDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASE-------RTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQE-PE-NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIY----NLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF-----KTRAFDWVLGR--ENKIDSTQASD--RDQETQNLKAMAPEKREETLIK------QNEARAAVQRL---------------EKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDN----QRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF + IDNLQAATELVAETVEQKSNEVVGAVEDNTAANELTAENTQSTAGNTKKTYEELQKLNNFSSQMNEKLRGFGVMMERRFGVV--------SKMASGIGAIEEALKKPEQPQTMPSPQPVLPTVPEQ---PNNDNYQGLPKKKPDVDDRKKKNAADKRNADSMENLLKVVRGGFKETIGISNKVLGMLFKITLTAMAEAAKWGAILMGIVFVIDTLMVHFRYWSDLFETKFNEFMDKAGGWAGPISDILTTVRQVRDYWSKGEYKELIKSLVMGIGDAFYKTFIQLDRIITTGIAKILRMI---PGMGDYADKLEYGALKSAVAQ-GYTPNERELELMDKVESEHEE------DKYGERTGWTGKARDIGEAIGDSIKDKVNEGLVSLGWRDQ-----KDVDAEKRQEELKRGEYKSVSAEQRSASRKLRIKSEGAINNINEVMENLSGDYDKE---RMGELKKDIDVYREQVQDPTLVE--SDRSQLERLIEKFDEMYADKTNGVVPTNPVPATETETAKQAERTEQMQKQAAIQQQTTNQTS--NVNNTQI--VTNNRTVKQGAPTTRIDAPGTI + +D++Q+A ELVAE +E+K N ++ +V++ EL AE ++ +T E ++ L +S +++KL M+E + V + ++G+ IE+ L P++P++ P+ +LP + + P+ D + +P++ P+ +++K + DK+ D + +LLK +GGFK TI I++K+ MLFK T+TA+AEAAK A+L +V ID L +HF+YW+D F + F+EF +AG W G + I + ++ +W G++ L ++V G+ D Y L I++ GI+KI I G + A + AL+ + G + +E + + + K +S+ E DK GE K R +G ++K++ S RDQ K + EKR+E L + E R+A ++L E GD D E M L+K + ++ + D + + + + +L++ ++ + Y P PAT + +R + +QK ++Q+ T NV NTQ+ V N++T+ Q T APG + + + + + 31 + gi|33620639|ref|NP_891750.1| + tail length regulator [Enterobacteria phage RB49] >gi|33438535|gb|AAL15120.2| tail length regulator [Enterobacteria phage RB49] + NP_891750 + 577 + + + 1 + 200.675 + 509 + 5.38583e-53 + 42 + 570 + 32 + 572 + 0 + 0 + 164 + 284 + 82 + 576 + LDDVQSANELVAEVIEEKGNNLIDSVDN-------VAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQE-PE-NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIY----NLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF-----KTRAFDWVLGR--ENKIDSTQASD--RDQETQNLKAMAPEKREETLIK------QNEARAAVQRL---------------EKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDN----QRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF + IDNLQAATELVAETVEQKSNEVVGAVEDNTAANELTAENTQSTAGNTQKTYEELQKLNNFSSQMNEKLRGFGVMMERRFGVV--------SKMASGIGAIEEALKKPEQPQTMPSPQPFLPTVPEQ---PNNDNYQGLPKKKPDVDDRKKKNATDKRNADSMENLLKVVRGGFKETIGISNKVLGMLFKITLTAMAEAAKWGAILMGIVFVIDTLMVHFRYWSDLFETKFKEFMDKAGGWAGPISDILTTVRQVRDYWSKGEYKELIKSLVMGIGDAFYKTFIQLDRIITTGIAKILRMI---PGMGDYADNLEYGALKSAVAK-GYKPNERELELMDKVESEHEE------DKYGERTGWTGKARDIGEAIGESIKDKFNEGLVSLGWRDQ-----KDVDAEKRQEELKRGEYKSVSAEQRSASRKLKIKSEGAINNINEVMENLSGDYDKE---RMEELKKDIDVYREQVQDPTLVE--SDRSQLERLIEKFDEMYADKTNGVVPTNPVPATETETAKQAERTEQMQKQAAIQQQTTNQTS--NVNNTQI--VTNNRTIKQGAPTTRIDAPGTI + +D++Q+A ELVAE +E+K N ++ +V++ AE T+ A +++T E ++ L +S +++KL M+E + V + ++G+ IE+ L P++P++ P+ LP + + P+ D + +P++ P+ +++K + DK+ D + +LLK +GGFK TI I++K+ MLFK T+TA+AEAAK A+L +V ID L +HF+YW+D F + F EF +AG W G + I + ++ +W G++ L ++V G+ D Y L I++ GI+KI I G + A + AL+ + G +E + + + K +S+ E DK GE K R +G ++K + S RDQ K + EKR+E L + E R+A ++L E GD D E M+ L+K + ++ + D + + + + +L++ ++ + Y P PAT + +R + +QK ++Q+ T NV NTQ+ V N++TI Q T APG + + + + + 32 + gi|392973136|ref|YP_006489094.1| + baseplate hub subunit [Acinetobacter phage ZZ1] >gi|390058277|gb|AFL47731.1| baseplate hub subunit, tail length determinator [Acinetobacter phage ZZ1] + YP_006489094 + 585 + + + 1 + 195.667 + 496 + 4.41683e-51 + 112 + 576 + 105 + 585 + 0 + 0 + 156 + 246 + 32 + 489 + KVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEP--ENNKKDQKKDDKKPTDMLGDLLKTTKG----GFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEW-----------GGLLQSIFGMLGD---IKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDK---AGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN + KLAALSERLKEKYEAANDATVDLPVKAEEPTTSES--LSSRISPEDTNNNVIPSVVADDPKPSKDLLESTNEVKGAPSLGPAAMIVSGLQTLTGAVKTGFAKSKSVSDKIAGMLFKYTVTQAVNAAKIALAVFGIILALDLLKMAWNAWGEKIMAKFEEWTQTFSKWWDNFKEWSTYFSDMKYAFEGMQGDLMGIRNAWESGDWPALASAIGTAFVDGIKTLSGIMDRVITKLIATILNKLGFKDTAKSIEAEGLQRYQNMTNNKLDPENQQKLAEEQLKR-EKKDGLTSTQRGVTSFLPDSWREKLGFITKNEHSQIEAEKKDQKARQSLSKDDQVKVVAASNEAREAVARLENIAVNADPNNKGQMATLDKYRKEAQNYINNPALSKSPNVKAELQNQLDRLTPK-QSVK--NTVTPETSTASKDVQTAKNIQIAE--AQKAKTNAVQNNNTANVQNNIVKSSRQYNVQAPITGTAAPGIFKATGVN + K+ A+ ++++E +A+ + K +P ES L RI P +NN +P P P + E+ + + P M+ L+T G GF + S++DKI+ MLFKYTVT AAK+A +F ++L +DLL++ + W +K M+ F+E++ +W + + GM GD I+ WE+GDW LA AI D I LS IM I+K+ A+IL+ LGF++ A +I L+ +Q T N L ++Q+ LA+ Q KR E+ G+ F ++ LG K + +Q ++ + ++++ + + + + NEAR AV RLE + DP N M +L+K A+ I++ A+S P K EL + R+ K Q +K NT P S+D Q +NIQ AE +++K + N NN+ S + VQ +T T APG+F ATGVN + + + + + 33 + gi|326536335|ref|YP_004300776.1| + gp29 baseplate hub [Acinetobacter phage 133] >gi|299483416|gb|ADJ19510.1| gp29 baseplate hub [Acinetobacter phage 133] + YP_004300776 + 582 + + + 1 + 182.185 + 461 + 1.85312e-46 + 75 + 576 + 84 + 582 + 0 + 0 + 164 + 246 + 65 + 533 + ELAAEASERTTESIKTLTGVASTISDK---LSKLASMLESKV-------QAVEQKVQESGASASTGLSVIED---KLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDE-------FSAEAGEWGGLLQSIFGMLGD----IKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG-----PGIIDKAGEFKTRAFDWVLG--RENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + ELQQEAVEANTH----LEQIEKSTTDSNATLSKLSSQLESKFSGQVQSPQVVEHKTTEE---------IIKDFAEKSKSKTESTEPAILPAVLPEATKKPNLGGAT----TPKE-----QKAKSDSTKASHPAMKVFNVVKSGFKSVKSVGDKIAGFLFKGALTAAIEAAKMAGIIFLIIAAIDLVRIHFKYWTEKFSAKFDAVKEIIMGYFDRFGNWMESIMPMFSGLFDAIDYIRNVFAKGDWSALAGAIGNVMKEAFNSLGAMIQNGIAKLASILLRKFGFNDTADSIEAIGLENKQNMTNTPLTPEEQKKVAKQQQKMLDKDYTPTQTGIT----AFLPDKFRKAIGALSDGEYDQIQAEKKNM--SQLKGLNKEDQTNTIGAMNEARAALNRYENKVERLDPNDPNQAAKIDNAYKEAKTAISDPDLKNVPDVKIELENQLGKLQAKTGRAAPKPAPAANSPEAAQANSIA---RKTNEVKAPVAQAANNTNVNTTM---VKNNKSVHVQAPVTSTNAPGVFHGTGVN + EL EA E T L + + +D LSKL+S LESK Q VE K E +I+D K E P + +LP NL P+E + K D K + + K GFK+ S+ DKI+ LFK +TA EAAKMA ++F ++ IDL+RIHFKYWT+KF + FD + G W + +F L D I+ + GDWS LA AI + + +L ++ GI+K+++ +L GF + A +I LE Q T L+ ++QK +AK Q K +++ GI F F +G + + D QA ++ LK + E + T+ NEARAA+ R E + +DP +P ++ AY AK +ISD + + P K EL+ + ++++K + P +P ++ N +K K ++ + NV T V N+K++H VT+T APGVF TGVN + + + + + 34 + gi|311993473|ref|YP_004010338.1| + gp29 baseplate hub subunit [Acinetobacter phage Acj9] >gi|295917430|gb|ADG60101.1| gp29 baseplate hub subunit [Acinetobacter phage Acj9] + YP_004010338 + 572 + + + 1 + 172.17 + 435 + 5.19477e-43 + 86 + 576 + 72 + 572 + 0 + 0 + 159 + 249 + 58 + 525 + ESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENN--KKDQKKDDKK-----PTDMLGDLLKTTKG-------GFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSA-EAGEWGGL---------LQSIF-GMLGD---IKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFD-----WVLGRENKIDSTQASDRDQ-ETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + EETKYLSNTADEISAKLSVLSERLKVKYDAASPDAPPVVRDNSTA-EVLADRL-DAQSEEQPKKQAWMPQPM-------------PVEKKPSDDLLSKSEDKGSKEGVKGAPNESTIPMIAAVKGVGSVVKAGFNKSIGIVDKISNLLFKMSVKQIADAALMGAAIFGIILSIDLLKAAWAAWGEKIMAKVEEWTTIFKGWWEGFKGWASSFSDLTTAFEGMRGDFMGIRNAWESGDWPSLAKALGTTIKDGLMTLSGILDRLFTKVLSTILDKVGLGKAAKAVEAEGLQRYQGKTNNKLSDENQKKLAEEQIRR-EKKDGLTPTQRGLTSFLPDKMRKGWAL-TDNEYNQIQAEKKDKAATKNL---SHDDQVKVTAATNEAREAVARFKNIADNYDPNKKDQAAQFDKYKKEAQAYISKPELAKSPAVKAELEAQVAAI-SKGKGGKASVAPEKS--ANSQDSGTVKNIKVAEAQRAANKNASPAGNTV-IQTNVAKTNKNVHVQAPVTSTTAPGVYGATKVN + E K L+ A IS KLS L+ L+ K A ST V+ D+L D E P + P+ PV ++P ++ K + K K+ P + ++ KG GF +I I DKIS++LFK +V +A+AA M A +F ++L IDLL+ + W +K M+ +E++ G W G L + F GM GD I+ WE+GDW LA A+ + D + LS I+ +K+ ++ILD +G AA + L+ +Q +T N LS+++QK LA+ Q +R E+ G+ + D W L +N+ + QA +D+ T+NL + + + + NEAR AV R + + DP +K A+ IS ++ PA K EL+ + + SK + K P+ + A S+D+ V+NI+ AE + +K ++ N Q N +K +H VT+T APGV+GAT VN + + + + + 35 + gi|310722277|ref|YP_003969101.1| + unnamed protein product [Aeromonas phage phiAS4] >gi|306021120|gb|ADM79655.1| baseplate hub [Aeromonas phage phiAS4] + YP_003969101 + 565 + + + 1 + 150.984 + 380 + 5.93083e-36 + 44 + 569 + 36 + 560 + 0 + 0 + 143 + 271 + 69 + 560 + DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV + DLLASSELIAETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITATNTSDQTAKKIVEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDKEENVERAIDRIGDRIVSSVDNGFKKTISVADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQNNYHTKANIVKNQNQTIVQAPR-TSSPGPGI + D+ +++EL+AE +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P G + I D F + E + D++++ ++ D +GD ++ + GFK TIS+ D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ N +T+ N V N ++TI Q T++P PG+ + + + + + 36 + gi|472438116|ref|YP_007677896.1| + baseplate hub subunit tail length determinator [Aeromonas phage Aes012] >gi|395653254|gb|AFN69809.1| baseplate hub subunit tail length determinator [Aeromonas phage Aes012] + YP_007677896 + 565 + + + 1 + 150.599 + 379 + 8.25687e-36 + 44 + 569 + 36 + 560 + 0 + 0 + 143 + 271 + 69 + 560 + DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV + DLLASSELIAETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITATNTSDQTAKKIVEEEEQTPKDNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDEEENVERAIDRIGDRIVSSVDNGFKKTISVADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAKGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLRGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI + D+ +++EL+AE +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P + G + I D F + E + D++++ ++ D +GD ++ + GFK TIS+ D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + KG D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+ + + + + + 37 + gi|311992947|ref|YP_004009814.1| + gp29 baseplate hub subunit [Acinetobacter phage Acj61] >gi|295815236|gb|ADG36162.1| gp29 baseplate hub subunit [Acinetobacter phage Acj61] + YP_004009814 + 597 + + + 1 + 149.443 + 376 + 2.04985e-35 + 44 + 576 + 46 + 597 + 0 + 0 + 174 + 287 + 61 + 573 + DVQSANELVAEV---IEEKGNNLIDSVDNVAEG-----TELAAEASERTTESI------KTLTGVASTISDKLSKLASML-ESKVQA-VEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPT------DMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSA-------EAGEWGGL---LQSIF-GM---LGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKR-IEEGPGIIDKA-GEFKTRAFDWVLG--RENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN + DMKAANDALDDIRDQVSDKADDPIDTLDASKQSLASIDNKMSQQISDNLASSIVQRRYEGTMIGETQNISAKLSLLLGKLTEMHVDAQVEAAQKDNIKSEPTTSEVIGDLIKKEQPEQKPEIAEKILPTEEK----------PSTKLLDENAGKSGKELVGKANPIVMGLDKVGGLLKT---GFKSSIGVMDKISGMLFKFTATQAINAAKVAAAIFAIILAIDLIKIYWSVWGEKIMAKLSEWAEIFKGWWDTFTDWGSQFSDFKTAFEGMGANLMEIKNAWVSGDFPALAKALGNAIIDMGKTISGIIGRTLASLFGPLLRKLGFGETADNLEAAGLRHYQNMTDNRLSPENQRKLAENQVKQEAKDGKTATERGMTDFLPNTWRNKLGFISDNELSQINAEKKDQSARS--NLSQEQKVDSVAATNEAREAIARYKKFADAANPDNAGDMAKVDKYKKEAAQYLSNKALDLTPSIKSELQTQYNAIKVKSKKDDV----KPETSAASKDTQTVNSIKTAEAAK--ANQQTQQTNVANVQNNVVKNSKTVHVQAPTTSTRAPGVHKATGVN + D+++AN+ + ++ + +K ++ ID++D + +++ + S+ SI T+ G IS KLS L L E V A VE +++ S T VI D + + P + E+ILP + P EN K K+ K D +G LLKT GFK++I + DKIS MLFK+T T AAK+AA +FA++L IDL++I++ W +K M+ E++ +WG ++ F GM L +IK W +GD+ LA A+ + D+ +S I+ ++ + +L LGF A + + L +Q T N LS ++Q+ LA+ Q K+ ++G ++ +F + LG +N++ A +DQ ++ ++ E++ +++ NEAR A+ R +K+ +P+N +M ++K A + +S+ A+ P+ K EL ++ ++ K +K KP A S+D Q V +I+ AE AK + + T NVAN Q N V NSKT+H T+T APGV ATGVN + + + + + 38 + gi|401824980|gb|AFQ22670.1| + baseplate hub [Stenotrophomonas phage IME13] + AFQ22670 + 565 + + + 1 + 147.902 + 372 + 5.89358e-35 + 44 + 569 + 36 + 560 + 0 + 0 + 142 + 270 + 69 + 560 + DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV + DLLAASELISETVEQ-GNSELRKIVNNTSETENIAAATEISAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITTTNTSDQTAKKIVEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDEEENVERAIDRIGDRIVSSVDNGFKKTISIADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI + D+ +A+EL++E +E+ GN N +N+A TE++AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P G + I D F + E + D++++ ++ D +GD ++ + GFK TISI D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+ + + + + + 39 + gi|109290160|ref|YP_656409.1| + gp29 base plate hub [Aeromonas phage 25] >gi|104345833|gb|ABF72733.1| gp29 base plate hub [Aeromonas phage 25] + YP_656409 + 565 + + + 1 + 145.976 + 367 + 2.35249e-34 + 44 + 569 + 36 + 560 + 0 + 0 + 142 + 269 + 69 + 560 + DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV + DLLAASELISETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITATNTSDQTAKKIVEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDKEENVESAIDRIGDRIVSSVDNGFKKTINIADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI + D+ +A+EL++E +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P G + I D F + E + D++++ + D +GD ++ + GFK TI+I D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+ + + + + + 40 + gi|423262258|ref|YP_007010857.1| + baseplate hub subunit tail length determinator [Aeromonas phage Aes508] >gi|402762136|gb|AFQ97250.1| baseplate hub subunit tail length determinator [Aeromonas phage Aes508] + YP_007010857 + 565 + + + 1 + 145.591 + 366 + 3.57946e-34 + 44 + 569 + 36 + 560 + 0 + 0 + 142 + 269 + 69 + 560 + DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV + DLLASSELIAETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITTTNTSDQTAKKISEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDKEENVERAIDRIGDRIVSSVDNGFKKTISVADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI + D+ +++EL+AE +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T + E++ P G + I D F + E + D++++ ++ D +GD ++ + GFK TIS+ D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+ + + + + + 41 + gi|66391985|ref|YP_238910.1| + baseplate hub subunit [Aeromonas phage 31] >gi|62114822|gb|AAX63670.1| gp29 [Aeromonas phage 31] + YP_238910 + 566 + + + 1 + 144.05 + 362 + 1.01075e-33 + 44 + 569 + 36 + 562 + 0 + 0 + 150 + 269 + 53 + 553 + DVQSANELVAEVIEEKGNNL------IDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQA--VEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKR---EETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPA---------TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKE--QSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV + DSLAAQELIAETVEQGNNELRQIKANTASLHDTAAATELSAESTEMSNTILREISETGKQTFSKLSEFAERLKGSFSADDVEQAPIRTASSSDQAIQIINEENPEPENPLVG-----YLRTISEDIKFLRENKNEPSDPKDPDVVPDDKDDLKTMIDRIGDQIVKSVDSGFKRTVNIADSISSTLFKYTITAALNFAKMAALVLSLIIAFDVLSRHFSHWTQMFQEQYAEFKETLGSFGTPFENLTGIVTDLVNYFKSDEYLKMFVRLAEGAADQMIYIVNMMMVGLAKLGAAILRALGADDKADTLEASAISVATKTVGYTPSEEEEATIGRVRKRQAQE---------EAEQSEASWWEKKKREWDG-----KPIETDEEKAVRERKKSIAENTTAEQFGKHDALSQKIQHVGVTAEKNETSNELLGKHRELLEKRASDVEQAKQSGEITTESYKQLKVEIEKQREFLDAHEQKL-----LKPKASIKPAPEPEIGVVGSIAKEEKRVEASQTAKQEAASNY-NTNANIVKNNNQTLVQAPR-TSSPGPGI + D +A EL+AE +E+ N L S+ + A TEL+AE++E + ++ ++ KLS+ A L+ A VEQ + +S+ + +I ++ P+P+ P L + ++ E+ P + + D K D K D +GD ++K+ GFK T++I D ISS LFKYT+TA AKMAA++ +L++ D+L HF +WT F + EF G +G +++ G++ D+ ++++ ++ + V + +G AD + + +M +G++K+ A+IL ALG ++ A T+ SA+ + G + SE+++ + + + ++ +E E + W ++ + D + ET KA+ K+ E T +Q A+ + +++G +N T+ + L K +K SD + Q K E++K+ + +++ QKL KP A PA + V +I K E E Q+ K N NT N V NN++T+ Q T++P PG+ + + + + + 42 + gi|37651664|ref|NP_932538.1| + baseplate hub subunit [Aeromonas phage 44RR2.8t] >gi|34732964|gb|AAQ81501.1| baseplate hub subunit [Aeromonas phage 44RR2.8t] + NP_932538 + 566 + + + 1 + 144.05 + 362 + 1.1527e-33 + 44 + 569 + 36 + 562 + 0 + 0 + 150 + 268 + 53 + 553 + DVQSANELVAEVIEEKGNNL------IDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQA--VEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKR---EETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPA---------TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKE--QSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV + DSLAAQELIAETVEQGNNELRQIKANTASLHDTAAATELGAESTEMSNTILREISETGKQTFSKLSEFAERLKGSFSADDVEQTPIRAASSSDQAIQIINEENPEPENPLVG-----YLRTISEDIKFLRENKNEPSDPKDPDVVPDDKDDLKTMIDRIGDQIVKSVDSGFKRTVNIADSISSTLFKYTITAALNFAKMAALVLSLIIAFDVLSRHFSHWTQMFQEQYAEFKETLGSFGTPFENLTGIVTDLVNYFKSDEYLKMFVRLAEGAADQMIYIVNMMMVGLAKLGAAILRALGADDKADTLEASAISVATKTVGYTPSEEEEATIGRVRKRQAQE---------EAEQSEASWWEKKKREWDG-----KPIETDEEKAVRERKKSIAENTTAEQFGKHDALSQKIQHVGVTAEKNETSNELLGKHRELLEKRASDVEQAKQSGEITTESYKQLKVEIEKQREFLDAHEQKL-----LKPKASIKPAPEPEIGVVGSIAKEEKRVEASQTAKQEAASNY-NTNANIVKNNNQTLVQAPR-TSSPGPGI + D +A EL+AE +E+ N L S+ + A TEL AE++E + ++ ++ KLS+ A L+ A VEQ + +S+ + +I ++ P+P+ P L + ++ E+ P + + D K D K D +GD ++K+ GFK T++I D ISS LFKYT+TA AKMAA++ +L++ D+L HF +WT F + EF G +G +++ G++ D+ ++++ ++ + V + +G AD + + +M +G++K+ A+IL ALG ++ A T+ SA+ + G + SE+++ + + + ++ +E E + W ++ + D + ET KA+ K+ E T +Q A+ + +++G +N T+ + L K +K SD + Q K E++K+ + +++ QKL KP A PA + V +I K E E Q+ K N NT N V NN++T+ Q T++P PG+ + + + + + 43 + gi|398313739|emb|CCI89086.1| + phage baseplate hub [Yersinia phage phiD1] + CCI89086 + 191 + + + 1 + 79.7221 + 195 + 1.49556e-13 + 2 + 189 + 3 + 187 + 0 + 0 + 69 + 102 + 17 + 195 + KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNV-------AEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKK + KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDTQAASELIAQTVEEKSNEIVGAIGNVESAVSDTTAGSELIAETVEIGNNINKE---IGESLGSKLDKLTSLLEQKIQTA--GIQQTGTXLATVESAIPVKVVEDDTDRXXVLXYRXLKQLIMILTLI---FSLPLSQLSQ-SKNHQKKNRKK + K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++ NV G+EL AE E K + ++ KL KL S+LE K+Q +Q++G +T S I K+ + D L R L L L F P+ Q + +K QKK+ KK + + + + + + + 48094830 + 17186091396 + 153 + 4157067357738 + 0.041 + 0.267 + 0.14 + + + + + + diff -r e7a6f7a7148d -r ab0d6782a95f test-data/blastxml/blastn-gene1.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blastxml/blastn-gene1.xml Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,128 @@ + + + + blastn + BLASTN 2.2.28+ + Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. + /opt/db/nt_aug2015/nt + Query_1 + Merlin + 58313 + + + 0.001 + 2 + -3 + 5 + 2 + L;m; + + + + + 1 + Query_1 + Merlin + 58313 + + + 1 + gi|451937967|gb|KC139519.1| + Salmonella phage FSL SP-030, complete genome + KC139519 + 59746 + + + 1 + 9779.15 + 10844 + 0 + 35381 + 53427 + 22789 + 4832 + 1 + -1 + 13209 + 13209 + 547 + 18276 + GCCACCTGCTGACGGTACTGGTCGATTTGCTGCGCCAGTCCGGCAGCCGCACGGTTCGCCTCGTTCAGCAT-CTTCGTCTTCTGCGCCAGGTCCTTGATGGCGTTGCCGCTGGTCGACACTTCGGATGCGAGGGTGTGGACTTGCTGCTGCAGGCCAGATAGCGTCCGGCGCGCAGCGTCTGACGGACTTATGATTTGCTGGATTTTCGACGCCAGTGGCCCCATCTGCGACGTGGTGGTCTGCACGACCCGGCCCAGGGTTGAATACCCTTTTACCGCCGCCAGTGCCTGCTGCGCTTGCTGCTGCAGACCCTGTATGACTTTATTTTGGGCGGCCGCCGCAGGCGCGGTGGCGATGATGTTTTCCTGCTGCTGCAGTACCTTGTTAACGCTCGCCACGCTGTTAACGATACTGGACTGCGCGGCACCGAGCGTTTTTGTCTCAATGCCATATCGTTGCAGCTCTTTCGTTGTACGGCTCACCTGCGCCGCCCGCGACGCCTCGGTGCGCTCTGCACGCTCTACCTGCCGGTTAACACGGGCGAGTTCGGCTTCCTGTTTTTTCGTTACCTTCGCGGCAGAGTCATACGCTTGCTGCAGCTGGGCTTGCTTGGCCCGTAAGTCTTCCGTCTTTTGCGCCGCTTCAACCATCGTGGCGT---TCTGACGTTTATACAGCTCCACAAGGGCATTCAGCTTTAACAGCTGCTGCCCGGCCTGCTCAAGTTTTTTGTACGAGGCTTCCAGCTGACGCGTCGAGACTTCGCCCCGTTCTGCCGCTTTACGCTGGTCGTCCTGCGCCTTCGCCAT-TGCTTCAATCGCGGAGGCCACGGCTTTAAGGGGTTTCTGGCTGAAATCCCTCGCCCGGATCCTTAGTTCGACGTCTTTGCTGTTAGCCATCGCTCAAGCCCTTAATCAGTTTTTTGTAGTGCGGGCCACCTTTCTTCCCGTTCATGACGGAGGC----CAGTAGCGCCTGCAGTAACGTGCTTTCCGTCACCATGTGCATATTCACGCGGCGCCGGGCAATCTTGATTTCAGACCACAGGTACCCCAGCGGGTACCGGCGTGCGTCTGGGTGTCCCTGAGACATCAGGAAGGACACGCCTTCCCGCAGCTCATTGTGAAACCGTATTACTTTTTCCCTTTTGCTGTAGACTCGGGTGTCAGGCCGGCCTTTGTGTCCCTCATCAGG---------TCCATGGCCTTCCGTAGCATCTTTTTTATATCTTCAACGTCCGAGAAGGTCAGGCGGCCAATGGCTTTCAGCGCGTCAATCTGGGCGGTCAGCGGGAGGCG-CTGGGCTTTCTCCAGGTTGGCTTCGTCGTCCGCTGCCAGCGCGATGATATGGGCTACCAGGCCGGGCGCATCGTTAATAAGGCCCATGGCGAATTTGCCCATGGCCACGTAGGAAAGGTCGCTGCCGCCGTGGGTTTC--GTAAATATCAAACAGCCCTTCCAGGTCGTCATAGTGAACGCGGACGATCTTCGAAATGTCCTGGAATGACAGGCCGCGGACCTCGAATGCAACGTCGCCTTTTTTA-GCG-CG---CTTAATGATGATCTCTTCGGTATCCGGGGTGAAATCTGACAGTGACATGGG--GTTTATCCTCTTCGTTGGTTGACGTCGTTAATGTAGCACGTCG--GCAGAAAAGCATAAAAGAAAAGCGCCCGTAGGCGCTTTC-CGGTATGAC-TGCGGT-CTGCCCTTACGAGAAGGTCGCGGTTTGCGATACTG-CGGACTTGCCGTTCGCCAGCGTTGCCGTAACTTTCGCCGTGCCGGCCGTCGCGCGTTTCAGCGTGGTGGTTGCCAGGCCTGTGCTCGCGGTAGACGCGCTCGCCGGGGTAACGGTAGCTCCGGCGTCCGTGGTGAAGTTCACGGTTTCGCCCTGAACCACGGTCCCGTTGCCGTCACGAACCGTAGCGGTAGCTACGATACCCGCACCGCCGGATGCTGCCGAAGTGCTCGCCAGCGATACAGACACGGTACGCAGCGTCGCCGGGTCAACGGTTGCCGCGGAAGGCAGCACGTCAATGTACAGACGCTGGGTAATGTTGTTCAGCTGCAGCGCTTCGAACGAGAACGACATTACGTTCCAGTCGTCGCCTTTCAGTGCGTAATCCCCGTCCGGGCGC-AGCGCCACTTTCGGGAAGTAGTAGTTTTTGTTGGTACCGACCGGGTTGTCCGCGATGTAACGCAGGGCACCGTATATCTGGTTAGTCTTGCCGATCACCATGTTGCGGTTCTGCGCAGCGATATCGCACTGGATGATCATCTGCTTGTTGCCCGCGAATGCGGTGGAGTCAGGCTCGATGTAGATACGGCCTTGCGCCAGGTCCAGCTCGTAGTTGCCAGCGGCGGTAACGACGGTCACGCCCGGCAGGGAGCTAATGTCGCCAGCGCCCGGGACGATTTC-AGCGTCGCCATCCGCTACGCCGACCACAACGTTATCCACGTTG--AACAGGCCAGTTGGGGTATCGTCACTGGTGCCGATCTGGTAATACTTGCCACGCCGTACCGGCTTGAACACTTCTTTGACGCCAGTCTGGTCGGTCAGGGTCATGTTCACCAGGTCGCCAAGGAACCACAGCGCCAGGTTCTCTGCCACGATGTTGTCGCAGGTGAAAGTCCCGGTCATGCCGGCTTCCAGCAGGACGGAGGCGTCTTTTACACGCAGGCCGTAATCCGACGCATAGTGGTCCAGGTTTTCAGTATCAGTGGTGATCGTGAATTCCGGGCCGTTGCCGAAGTACATTTCGCCGGTCTTGCGGTTAGAGTTCGGCAAGAACTTA-TCGAAATAGGTTTTCCCGCGTCCGATTGTATAGTCGTTCTGGAA---ATCGCTTTGCATCTTTCATCTCCTGTTAGGGATTCCGAATATCTACTTTTAGTCCTACCCTAATAGGCAGGAAGAAAAACGCCGTGTCCGATAGTCCTTCCTCGGGCGGACGAACAACCGGCTGTGCGAGTGTCAGTGTAGCAATCATTCCCTTCAACCGATAGACCCCCGGGAATTCCGGGTTTCCATTTTCATCCTTCGAGATGAGCATTGACAGGCGCTTTTCGACGACTGCCACGATGTCGTAGATCGGGTCCGTTGGATTGCGCGCGTCGTCTGCGCACCACCCCTGAACCAGTAGCACCCAGTCATCCATCCGGACGGTCTGTTCCTCGTTAGCGAATTTCCCGTAGTCGGTTGCTTTCGCTTCCAGAATAGACAGGAACGGCATTTTTGCCACGTATTCCGCGCCGAAACGGTCCCGACCGCGGTACACCTTTCCCCGGAAGTCATACGGGTACCCGTTATCCGGGGTGATTCCTTCCAGGAAATCCGTTAATGCTTTCAGCACATCGAGGCGCTTACTCAT---GATAATCTCCCAAAATTGCGGAAGAACTCTGTCGCCACCATGTCAGCGATTTTCGGCCCGACTTTGTCCGCCACGGACGAAAATACCTGGTCCACCGATGGCGCATACAGCAAAGCCACCTTATTCGGCACCAGCCATGATTTGTGCTGAGACCGTTTGTTTGCCAGCGATTCGCCGGCAGACAGCCGTACCGCGAGGCCGACGTTAAAGTTATCCTCGCTAAGACTCGCCCCTTTGTTCAACCGAACCAGGAACGCGTTCTTTAGGTACGTCGTCTTCCCCCGTTTAACCCGTACCGCTAACCCTTCCCTGCGGCGGCTATTAACCACCGTGCCACTG---GTCACGAACCTTGCCAGGGATGTCGCACGCTTGCGGCCTGTAATGGTCGCTTCGAGGTTGGTTTTAGTGGCCTTTTTGGTGACTTTCAGGCGATCGGCATTGAGATATCCGGAGGGGAAGGCGATTTCGTTAAGCATGGTTTTCTTGGCCAGTGACATCCCGCTACGGGTTGTGACCGTGTTAATGGCCATCTGCATTGCCAGGGCGGCCCTTTCCGGAAACA--TCCGGAAGTATTCCAGTATCTTCTTGTCACCGACGGAAATAACGTTAACGGCCATCAGTTCTTCCTCGACACCTGCCAGATCACTTCGACCGGACCGACAATCGGTTCCTGCGTCTGCAGCACCAGGCCAACGTTGCCGTATCCTTCCGCCTTGATGATAATCACGTCACCGCCTTCCAGCGTGACGCCTTTCGCCTGCAGCTCGTCCTGCATAAAAACGATTCGCTCGATGCCATCGATAATCTGGGCGTAACCGCCACTATCCAGATCGCCGACCAGCTGCATCTTGTTGTGCCAGCGCACGCTAAGATCGTCGACGATGACTTCCTGCGAATAGCTTTCATACCGCGCAGATACAGACAGGGACGCGTGAACGTCCCTGCGTGCCTTCGCTTTGATTGCCGCGAAGTTAGAGGCCATA-TCAGACCTCTTCGTCCGCTGCGCCGGCCTTACCGCCTTTTTTGGTGGTGGCCTTCGC---GTCAGACTTTTCTTCCTGCGCAGGCGCTTTTTCTTCCTGCGCAGGCGCTTTTTCTTCCTGCGCAGGCGCTTTTTCTTTCTTCGCCTGGTCTTCCGCATCGACTTCGATGATCGGACGATCGAGGGCGCCCGGGTTCATGCTGTTAATGGAGTCCAGCTCTTTCTGGGTGAAGTTGAAGATTTCACCGATCGCTGGGCGGATACGCTGGCCGTCGCGGAAAACGATGACCGTCTGGACTACTTTACGTTGTGGCATAATCTCTGTCCTTTAAATTGGCCCGCCATTATTGACGGGCC-------------TGCAGGTGGTTACGGAACGACGGTCAGCAGGAACGACGCATTCGGGTCTGCCGGGACCATCAGCGGTGCGCCCTGAGTCATCAGGTATTCCACGCTCGGGTCCTCTTCTTCCCACATTTTCGGGAAGTATTCCAGCGCCCGATAGCCGGCCGCTTTATCCATGATTGCCCCGAAGCACTTAACGCCTTCGATCGCAGACGAGATACCCATGACGGCCTTCTGGTTCATCAGGTACTGTTCCTGATTTTTCCAGTCGCGGAATTTCTGAGTGTTAACCCAGAAACGCATACGGCCGGCGCCGTTGATGCCTACCAGCTCACCCATGAGCTGAACGCCTTCGACATCATCCCACAGACGGGTCAGGTTAGAGTCGGACCCACGGATATTGCCATCCATCAGGCCGTCTTTGCCCCACAGCTCTTTGCCGCCGACTTTAACGAACTGGTCCCATGCGTCGCCGCCGAACACGTAATCGCGGATCACCGTGCCGGAAAGTGACTTATCGGACACCAGACGCTGACCATCGCGCAGGTCGGCGATCATGTCCATCAGGGTAACGCCGGTAGCGGTCCAGTCGGAAGTCATGGTCAGCGCAGCATCGCGGCCAAAGTCTACGCGGGTTTTCGGGTAATCCTGCCCTTCCACGTCAACATAGCCGTACTGCGCAGCCTGCGCTGCCATCCATTCCCAGGTGTTTTCGTGCATCGCGCGGTGCTTCATCAGCAGGAATGCGATAACACGGTCACGACGCTGCTCGTTAGACAGGCTACCGGTACCGAGCGCTTCGCCAGGTTGACGCGGAACAACCATGTTCGGGTCAATAACGTGCTTCGGTTTCACGTAAGCCGGTTTGAAGGTCTTGGTGTTGTAACCCTGTTCCTTGATCACACGGCCTTGCGCGGTAGGTGCGACAAACGGCGCGACGCGGGTAACGTCCTGGATGACCTTATCGAATGCGATCTGGTCTTCCTCGAAGTTAATCTGGCGCGGGAACCACTGCAGGAAGAACGCCGGCAGGGACTTCACCTTGCGTTGCACTCCCATCAGGACGGTAGTTTCGTACAATCCAGCCATTTCTGCTGCTCCTTAGTACAGGTTGCCGATGTGGATGTTCGTACGTTCGAACACCGCCTGACGTTTCAGCAGGGTATTGACTGCTGCTGGCCATACGAGTGCTTCGTGGTTGAACACACCACCGATGTAATACGGTGCGTAGGTTCCC-ACGACACCCGCTTCGTTAGCGATACCGATGGCCGTCGCTTCCGGGTTGGCCGGAGTGGTCGGGTCATAAGGTACCAGTTTGCCAGCTGCGTTTTTAGCGATGACCTGATAACGCGCAAAC---GCGACTGCGACTTCACCGCCGTCGGTTACGATATCAGCTTCACCAGCAAACAGCTGAGTGGGTTCCCACGAACCGAGGTCGCCGTTGCCAGCGAGATAGTTCGGGAGGCTTG------CCATCATGGAGATCAAAGA--CATA-GTAG-TCGCCTCTTACTTAG---TGAACGAGTCGCCAGCTACAGCGGCCATCGCAGCCATCAGGCCATCAC---CTTTGCCGGGTTCAGCCTGCT-GTT--CGTTTTCCGCACCCATATTCGGGTGGTCAGCGTTATCCATCACCGTCTTGAACGGGCTGTCCGCC--CCTTTCTCTGGCTGATTGGTAGCCGCTGCGGCTGCC---GGGGCC-----------TGC----------TCGACCGCAGAAGCGCCCAGCATGGTTTCAGCATCGGCAACACTCATTGCGGTGTTGAACGCAATATGTGACGCCAGTTTTGAACGGCCTTTCGCCGCT---TCGCATCCCAGAATACCGGAAATGCGATTACGTTCCGCCGTAGTCGCTGCCGCGGTCGCCGTGGCAGTTGCTTCGGCTGCTGCTTCTTGACGGGCAGCGTCCATTTGTTCTTGGGTAAA---CATCGCGTTTGCTCCTGGTTGTTCATCCGAGCC---ACCGGACGGCCCGTTTAGGAATTCAGCCACTGCCTTAGCCGGCGTTGTGACCGCATCTATTAGTCCGAGGGCCAGTGCTTCTGGGGCGTTATAGCATAATGCCTCGGTGTCACGCACGACTTTCGGATCTAAATTTCGGTTTTGTGCGACAAGGTTGACGAAGTCTTCACGCATGGTGTCGACATCTGCCTGCCAGCGGGCCTTTGTCTCATCCGAAAGCGTTTCGAACGGGTTGCCGTCGGCTTTGTGCGCACCGGATTTAATAATACTAACCTTAACGCCGAAGTCTTCCAACATCTTACTGATATCGACGTGCATCGAGATAACCCCGATGGACCCGGCGCCGCCCGACGGAATGACCGCCATTTTCGTCGCTGCGCTGCCCAGGGCGTAAGCCGCAGAGTACGCA-TTGGAGTCCACGACAGCGAATGACGGCTTCACTGCGCGGGAGGCGAAAATCTCGTTCGCCAGCTCAAAACAGCCCGCTGCTTCACCGCCGTTAGAGTTCACGTCGAAAATAATAGCTTCCACGTCAGGATCTGCCAGTGCGGCGTTCATCTGCGAGCGGATGAAATTGTAGCCCGTCACGTAGCCATAGTAATAGCCGCCGTAGCGGTTAATCAGGGAACCGTGGATCGGGATAATGGCGAAGCCGCCGGAAAAGGCGAAAGGCTTGTTTCCGC---TCGACGGCGCCATGCCGTACGCCGCGCATAGATTGCGATTGCGCTCCGCGGCGATACGTTCTTCGGCATCGAGGTCAAAGTCGTCCTCATC---GGCGCTCATCTGGAACACCGACTGGATATTCAGCAGGAAATTGGTGTCGCTTTCACGGACTGCTACCGGCGACCCGTTCATGCG-CTGAACCGCTTGCATTAAG---CTGGATCGAACATG--TGCATTCATTGGTTCTGTTCCTCATCAGGGTTATCAGTCGCCGACGAAGA-AGATGATG---TCGTCTCTGCGCCTTCGACAACTTTACCTGAAAAATCCAAATCCAGCGATTTAATCAGATTTTCTTCCCGCGCGCGCTGCTCAAACACCGAACGGAAATCGCCACCCAGGCGCGCAATTTCGGCTTCGTACGTTGACAGGCCATTCTTGATACGCAGGATCGCGGCTTCGGTTTCTTTCTTCTCGTCAATCTGGCCACGGCTGGCACCGATCCATTCCGCATTGCAAATCGCATCACGGAACATCGGGTCATAGAAGTCGCGCCAGGTCTTGCCCGGAGGCAGCGGCACATTGCCGTCGTTAATCTCTTCTTCCAGCCACAGCGTATAGACCATGGACGCGAAGCGGTCGGCCACCAGCTTCTTACGGCTTTCCATGAACTTCCACGTTTCCGCCATCGACGCACGCGCAGAACTGTAGTTCGTCTTCGTGTAGTCGCGGCTGAACTGCTCATAGGAAAGGCCAAGCGCCGCGGCGATATTGCGCAGCAGCGATTCTTCATAGTCGGTACCGACGCCACCCGGTGTGCCGGCAGGTTTCAGGTTGAACTTCGTTCCCGGGAAGAGGTGCGGGACTTTAACGCCGTCGATCGTGATGTTCTTCGACGCGGCGACATACTCGGCCATACTCGCCATGTAGGCATTGAAGTAGTC-CGAAAAGGCGGTCTGCCCCATGCCCAGCTGCGCGAAGACTTCCTGCGTCGGCAATTCAGATTCGATAACGGCGGCATACGTCGCATTAACGATGGCATTCTGCAGGGTGACTTCCTGGAAATTACGGGTCATCCGCATCTGCTTCAACGCCGACACCATCTCGCTGATCCCGCGGGTCTGCCCGGGCAGCAGCTGTTCGATGATGTGGATAATGCGCCGGCGGCCCCAGTCGAATCGTGCTGGCTCGCGCTTCCAGCGCCACTGGCCGTCAATGTTGGTGTAGTCTCCCGGGAAGGCTTCGCGGAACCAGTACGCCTGCGGGGCGCCATACTCGTCAATCTCGACGCCCTTACG--GATCCG-GTCGGTATCCGCCTGCATGTCCGGGTTCGACAGACGATACGGCGAGATAAACTGAATGGCGGTACCGAATGGCCGGCG--GCCTGACGCGCCACGCCCGGTAGACTTGACCCACTCGGCAGACCCCAGCACTTCCCCGGTCATCAAAAACCCGCCGACCGCGAGGCGAACCAGGCCGGTAAACGTGTTGACGCGCCGGGCGTCGAACCAGTTTTCCGGTGACTCTGCAGCCATGTTGAACCGGGATTCGACGATAGCCTGGAAGTCCTCCGCCCAGCCGTCCGGGGCGCCAAGTATCAGGGAATTAGGCTTGGCGTTCAGCTTGTACTGCGACCCGACAATGCTGTCACGGTGGATCGCCACGGCGCCAAAGGCGTAGCCGTCGTTCTGCACCATGTCCTGTGCGCGGGCGTCGGCCAT-GTCCTTATCGCGGGCGATCTGCTGGTCAGGCGAGATTATCGCCGGATTCCAGTTGAAGGTTGCGCGGGTGTTTCGTTCAGCGCCCTCAAGGCCGCCGCCCGCTGC---AGGTTTCGCCGGAGAGGCGTCGACCGTAGCAACC---GCGGTTTT-----CTTGCG-CGCGCGA-GTG----GCTT-TCTTGACTTCGCTCATCAGAA-AATAAACCTCGCTGGGCGACTCGGCGTGCCGAAGAAGGCGCTGCACGGGTCGGGTGAGTTAATTGCGTTCTGCAGTCGCAGAATATACGCCCACAGGCTCTGGCGGTTGGCCGCCGTATACTCTACGCGTTCGCCGTTCTGATCCACCACAACACGCACCGAACCACCGACGTTCAGCTGGTTATAGGCGTCCATAGCGTCATTCAGCCATTGTTGGTACTTGGCTCGGCATTCATCTGGGGTCATGGTGGTCATCCTCATGCTAAC---ATTTCGGCCAGTTGCGCAAAACTATAACCTGTATCTGGTTTTTCTGCGATGCCATCTGGTTTATCTA----CTGTGACC--ACCAGCGGGTTTTTATCCCACTCGTCAGCCCACACGGGCGGGTTATCCCAGTCTATTGCTTCCATCGCGAGGACACGCCCGCTGATACACATCCCGATCAGATAGTAACTCAAGTCCCACGTTTCGTTTCGGGTACCCTGCGGGCATTGCCAGCCTTTTTCGTCGCGGTGCTCGGCGCACATCTCGCC--ATAC-GCGTAGTCCGGAAGCCAGGTCGGGAAATGATACATGCCTTTGCCGGGGACCGTTACATCCAGTCGACCGTTAAGCATGTCTTTCACCATATTCGAGTTTATCATCAGCACCGGGACGTCGCCGCGCGCGATCGCGTTTTTGTCCTTCCGGTTAGAGTCCGGTGTCGCGATATGGGTACGCGGGCTTTTCGGCATCGGGTCGCCTTTGACCAGGATGAATCTCCCGTTTTTCCCCTCGCGGCGCAGCTTGCGATAATACTCGTACGCATTGGCCGTTACGCCTGCCGCACCACCGGAGTCACAGGCCGTCATCTTGACCTGCATCACGCGGCTGGGGTCATCGGCCAGCGGATAGGTCTTCATCATGACCTGCTTCTCGATCAAATCCCAGTCCTCCAGGTACGCCGCCGGGCTTAACTTCTCCCGCTCGCCGTCTATATCGAGACGTTCGGATTTGATGATGTTGAACCGGTCTATCAGGTAAATATCGAACGGGTACCCCGGCGCCACGCCGAAGACCGCCACCTCAAAGCGGTGTTTCTGGACGTCGACCGTCGCCGCCAGGAAACGCACCGCGGGTGGTACCGTTTTTTCCGCCCACGGCTCCGCCCGGGCTTTCAGCATTTCCGGAACACGAACCGACTCGATCGACTTCGGCACATACGGTTCGCCCATGTCGTTGTTCCAGAACTTTTTCAGTGACTCTTCCGACATCGTGCGCTCATAGTCGTCGGACGCATCGAGGTAGTTCAGCACCAGCGTCTGCCATGAGATAAACGCCGCCGCCGTACCGCGCAGCCAGAAAGACGCGAATGTCGCCCGAACCGGCTCGCCGACCAGTTGCCCTTTCTCGTTTACCGTACATCCTTCCGGTACCCACATGCCCCACAAATTCATCTCGTACTTCTCTTCCGGCGCGATTTCGCAGCCGCAGCATGGGCAGACCATTCTGGCCGTTTCTGCTTTTTCCAGGTTGGTTAGCGTTCGGCCATCGGCGGACTTGGTGTCCCACTTCATCAGCTGGAACGTTCCTTCGAAATACTGGTCGCAATGAGGGCATGGCCATTTCCAGCGCCGGCGGTCGCCGCGATTGTAAAGCCCGACGATGCCGTCGCACGGTGGCGCTTCATGCGGCGTTTTCTTGATCCAGTTTGGGTCTTTTACCGGGCGGGACGGCGACGATTCTGCCGCGCACATGGCAAACGACCCGAAGGTCGTTGTACGTTTTGACGCGAGGTCAAAGGCGTTACCATCGCCACCGATGTCATCGTCAATACGGTCATAGTCGGTGATGATGATACGGCCAACCGGCCTCCCCGCCAGTTCCGTAACCGATGGGTAACTAAGCGTCAGGATGATCCCGGTGGTGTAGTGTTTGTCGAATTTGTTATCGGCATCACGGTTCTTCATCAGCATGGCGCCTACTTCCGGGCTGTGCCGATGGAGTCGGTCCACGCGTCGCATGGAGAAGTCGCGTGCGGCGGTAGAAGTCGGGCAGAACACCATGATATCCATGGGGTCCACTTTCACCGAATAGGTAATGCCGTTGAGGATCAGCGCATCCGTTTTCCCGCTCTGCGCCGGGCCTACAAACGCCATTTTGTTGTAGTGGCGGCTGTTCAGCGTGTTCATCGGCTCGACCATGTACGACGTGGTCATATTAAGCCAAGGCCCGACATATGCGCCTGGCTGATTCACGTAACGGTATTTGGCGGCCGCCTCGGCGACCGTCATGCGCATTGGCGGCCGCAGCTGACTGCCGACCGACCGGATGATGTGGTTTAACGAT----TTAAACTTCATCGTCTTCTTCCTCCGCGAACCGT-----TTTTC---CAGGGTATTCGCGAGGTCATCCAGTATTGAATCTACCGATGACTGCACCACGTTGCGCTGCGCTTCGGTAAGCCCTACCTGCCGCGATAATGTGTCGGGGATCAGCAGCAGACTCATTCGCAGCGTTTTGATAGCTTCGCCAAACACACTGACCACGTCTTCCGTTGGCCACAGGTTCCCTGCGCGCAGGTCGTACTCCTGCTTCGCGCGCTGACCGTTCCAGAACTCCTTCGACAGCTCTTTGGGTAGGTCTTTGAAGTTCATGCGGCGCAAATACGTCTCGACGTCGTACAGCGGTTTTACCAGGTACGGCGCGACTTCGTGGACCGCGTAAATCGGGTACCCGCCGCGCTCCCCGACGGGCGGGACATCCATGATCTTCGGCGTGATGTCCCGGCGCTCCATGCGGAACAGCTTCGCCAGTTGCGTTATGTTGCATCCCTGAAAAATCATCGCCTCGGTATCAGCGTCCGGCGCATTCGATCGCCGATTGCGGGTCGCCAGCGGGGCAGTTTTAGTCGTCTTCGTCATCCCATAGCTCCGTTTTCTTAGCCTTCATGCGCTTAGTTATGCGGCCTTTGATGCGGTTTAGCAAATCAAAAAAAGCATCTTGCACATCACCCTTAGTATTTAGCGCTTCGATGACGGTGCCGTCGACAGTGTCGATCAGCTCCTTCGTTTTCGGATGGCGGATCATCGCTTTCATCTGATAGACCGTCACCGGGTGCTTCTGGCCCTGACGCGCCAGGCGGCCATTGAATTGCAGAAACCGTTCAAGCGACCACGGGTTATCGACGTATACGATGATGTGACCACCGTGCTGCAGGTTAAGCCCATGGCCGGCGGACTGGGGGTGCGCCGCCAGCAGCTTTATCTTGCCGGCGTTCCACTTCTTAATCGCCTTGCCATCATCGTCCATGACGACCAGACCTCTTTTCCCGAACCGCTCCTGCAGGCGGGCCAGAGTCGGCTTAAAGTGATAGGCCAGAAAGACGTTTTTCCCCTCCAGGGTGGTGTCCAGTAATTCTTCCAGCGCATCAAATTTCAGATCGTGAATTCGATACGCGTCTTTCTGCTTCACGACTTTATCGTCACTGGTGATCCCGACGATTTTGGTGTCGTAGATGAATCCGGACGCCAGCTGCAGCAATTTGGCCTGGAGGGACGCGGCCTGCTCGGCTTCAATCGTCAAT-GGGTCATCCAGATATTCGTCAAATTCGTCGGGCATGAATTCGACAAGGGATTCTTCTTCCATCTGGCGGTACAGGTCGGCGGAATGCGGGTCCAGTTCGACCGCGACCGGAACCAGTTTCGGCTTTTCGAGATCGAGATAATCTTCCGCCTTCATCACCATGACGATGTCGGAGATCTTACGGATGATTTCTTCCTCGGCCCCATTGCGTAACTTGAACTTGAAATTGTACCGGTTCTGGATGAAATAATTTTCCTGATACCCGGTGATCGTGGTGCCAAAGCGCTCGCCTTCGTCCAGCAGGTACGTCTGCGCGAAAATGCCCATATACCCTTCGGCGGCAGGGGTTGCAGTCAGCTCCACCAGGTAGTTTATGTACGGCCGGCAGCGGCGTAGCAGCTTGAACCGTTGCGAGGTATGCGACTTGAACATGCTGGACTCGTCCAGGATAACCATGTCGTATGGCCATTTCTTTTTGAACAGCGTACACAGCCACGCGAGGTTATCCACGCTCACCGTGTAGAAATGGCAGTCCTCGCGTGCGGC--GCGCTCGCGTTGCGCTGCATCACCGTCGATGACCGATATCTTCCAGAAGCAGAGATGCCCCCATTCCTCGAATTCGCTTGGCCAGCCCACTTTCGCAACGCGCTTTGGCCCGACGATCAGCACTTTGTTAACCTTCCCGTCGACGATACGGTCCAGCGCCGCGGTAGCGGCCATCACGGTCTTGCCCAGTCCAAGGTCGACGAACAGGCCACAGAACGGCGTTCCTTTGATGAAGTCGACGCCGTCGTCCTGATAGCCGTGCATGTCCGACCGCTGGTGAATT--ACGTTGCGCTGGCAATACGCGATTGCCTTACTCAAAGGCGATAAGGTAGTTCTTAAAGTCTTCAAAATTGTCCACCCATGTCACGTTAGCCCCTTTGGCTTT---CATCTGCCGATGGCGGTTTCGCTGCTGCAGCGTTGGTTCTTCGCCAGGTCGCTTGAATTCCACAAAAAGCACAACGCCATTCCGGATAAAAACGCGATCCGGAACGGCCTTTTTCCCGGGTGCCGTGAACTTCGACACCCACCAGCCGCGGCCCTGCGCATACTCGCAGCAGCGGCCTTCGACCTTCGATTCCCTGACGACAGGGGTTCCCCATTCGGGCATTAGCGGTTTCTCCGGCAAGTATTTGATTTCTATGCAAATTAGTCTTTGCGATAAAAGAACCCTTCCCACCCGGCGGCGCCAAGCGGTAATCCGGGCGCCCATGGCAGTTTCGCCGCCATGCAGCCGATCAGGTCAGCAAGGGTTAACGGGCTGTCTTCCGGGACTTCGGTAACGATCTCATCGTGGATATGCATGACGATCTTAAAGCCCATCCGATGTGCCTTCTTCATCCCTTCGGCGAGGACGTCACGCGCCAGGGCCTGAACGATGTTTTCCACAAGTTTTCCACCGTGGCTGAACACCTTGCCCCAGGACGAACCGCCGGATTTTTCAATTTTCCCTTCGTACTGGAAGTTCAGCGTGGAGTATTTCTCGCCTTTACGTGGGCCGC-TCTGGACCGTCATCTGGCGTTCAGCGATGCGCGGGCGGAAGTAGTACATCTTGCGGCCTGACGGCAGCTGAATAGTCAGGAATGGCTTGGTGTATTCGATGGTCAGGCACTTCCACTTCACCGGGCGATGCGTACGGATGACCTGGAAGACACAGTTTTCCAGTTGCGTCCAGGCGTTCACTATTTCCGGGCATAGTTCACGAAACGCTTTCACCGAATCCGCGGCTTCTTTCTGGGTCATGTGAACGCCCATATTCTCCGCGTATCCCCACAGCCCGGTTTTCTTCCCGTCATCGCCGAGGTGGCCGCCACCAAGGCGATAACCTGCACCGAGGGTAGCGGGTTTGGCTTTACTGCGGTGAGGAAGGGTGTCTTCGTACGGCAATCCAAGCCAGTGAGCGGCGAACGAGCGATAAAGGTCATGCTTTGCCGCCAGTGTGTCCATGGACCATTTGCAGTCGGTCAACCATCCGATCACGACAGATTCTATGGATGCAAGGTCGGCAACGATAAATTTATGCCCGGGGGCCGGGATGATTGCTGACCGGATGCAGCCGACAAGGGCGTCCATCGGTTCCCCGGCGAACAGCGCCAGATTATCCAGCTCCCGGTTCGCAATGAACCGGTTCGCGATCGTCAGGTCTTCCACTTTTTCAAGAAATTTCGGGGTGCGCGCGAGGTTCTGCGTCTGCAGGCGGCGTCCGGCCCAGCGATTTGTTCGGCTGGCGCCGGCGAACTGCAGGGAATAACGGAAACGCCCGTCTTCACCGGCGCAGTCGATCATCGTTTTGTATTTGGCGATTGAGTTTTTGGCGCTGTTAAGGCGGGCTTTCAGAACGGTTATCGCTTCATCATCGACGCCGTTTTCTTCCTGTTCACGGATAACTTTTTTCACCGTGTCCTGGCGCACATCGTCAAACGGGTACCCTCGTTCTTTAAGCCACGGTACCAGCTTGGATACCGAGTTCGGGTTTTGAAGGCCGGTGATATCCTTCATCTCTTCTATGATTTGCGGCTTCCGGCGTTCAGCCAGGTCCAGTGCGGCCTGCGCGAATTCGGTGTCGATCATTACGCCGCGGTCATTGATAAGCTGGTCCAGTGCGTATAAGTCCCATTCCTGCG-GCAGTATGGGGTACTTAATGAGCCGGTTTTTAATCAGCATTTCTGTATCAACGTCGCGAACGTTATACCGGCAGAATCCCCACCACTCTTCGGGATCCGTCAGCTCGTTACGCCATTCAAAAGGGTTATTTTTGGTAACACGTTGAGGCACGCAGAACATTTTTATCAGCCGCTTGCCGTCCGTGTCTTTCAGCTGGTCTTCTTTCAGCCCGATCTGCTTACCTATCTGCAGAAGGTCGCCAGTGAAGCCGAGCATGTACGCCAGAACCATCGTGCATCGCCAGGAATTATACGGGGTTTTCAGGCCAAGAACACGGCGGGTCATCACCCTTTCGAATTGTGCATTGAACGCCCACTTCTCCACGTAGGGATCAAGCAGTGCTTCTTTCAGCTCTGCTGGCATCTTCGCGCCACGGGATAGGTCGGCGTGCTGCACCTTGCCGTTGTTAAGGGAATACGCCGCCATCAGGACTTTCG--CATCCGGGCAGCGGGAATATCGGTCCAGGCCTTGCGTTTTGAGATTGGCACGCGCC--CGGCTTTCGTAGTCAAGGTTAATAATATCGGCCATGGTGTC-CTCTTAT---GAGAAAGCCCGCACTAGGCGGGCTTCCGGTTTCAATGCCCGACGGGCTGGGGGTTAAACGTCGTCGTCTTCATCGCCGGCGTCGTCGTCTTCCCAGTCTTCGTCGTCATCCCACGCGTCGGAGGTATCAACACGACCTTCGCCGAACTGTTCGTCATCCTTACGCTTTAAAACGGAGATCAGGTTAGCATTTACGCGTTTGCCATATTTGTTATCCTGGGTCCAGGGTCGGATAACCATGGATACCCAGCAACCGCCGTAAATCTCTTCTTCAATCTCAGCCTTAGTCGTTAATTCCTCGCGCTCGATGTTAAAGACTTCGGGCTTTTTGCTTTCGCGCGCAGAGAGAACCCACATGCCAGCGCATTCCGGTTTGTCCGGGAAATCGACATCGCCGTCTTTCAGGAATAACATGGCCGGCGCCACTTTGAGCGGACCAGCTTTGTGATTCTTTTTGGCGACTTCGATCTGCTCTTTCAGCAGCTGGTAAATCTCTTTGTGCGTTTTCTTCGG---CAGAAGC-CCGACGATGCCGTATTTCGGCTCGCCTTCGCCGTCTCCGCCGTATGGGGCGCCCAGGTGCGGATATGAAGCGCGTACGTTGGAAACTTTGATGTGACCGCTCTTATACAGAACGCCGTTTTTAACTTTCTTCGCAGGAACTAATTTTTCCGCCATTTCTCTA-CTCCGGGTTACGAATTTACGGGTTTACCATCT-------TACAGATTTACACGTCATCGTCGTCATCTTCGTCGTCATAGGCGCCGGAATATTTCTGATCCAGTGGTGGCCGCTTATCAGTCAGCGGAACCAGGGTCGGCTTGCCTTCCGGCTTCCATACGACGCTTTCGATGACCATTGGCGCGCCGGCGCGTGACAGTCCAAGTTTTTCCCGAAGGACTTCTTCCATCTGCGCCGGCGAGCGCAATTCGGTTTTCATATAGTCTTTTTCGTCAAGGCCAAGGAAATCGTACAGCTCCCGGGCCTTTTCGACGTTGG----TATGCACACGGTTAGAGCGTGATTCCACCAGCTTATGCCCGGGAACCTGCTTACCGT--CTTTCGCGGCCCGCTCCAGCTCCAGGTCCAGGCGGGCGAACCAGTTTTCAATCACTTTGCGGTAAGGCAGGATCTTGGCCATCTCGGCAACGGACAGGTCGCCGAACTTAGCCTTCCGCATTTTGTATTCTTCCGCCAGGGCGGCGCGTAACTGCGACATCTCATAATCTCCGAATTCAGCGTCCAGGAATTCGAGGTCGGCACCGACGGCGCATTCCATCATGTACGCCACCGCTGCGCAATTATGCGCGGCCCGGCACCACCGGCATCCTTTCAGCGTCGCCTTGCGCTTGGCTTTGAGTGACCAGGCGGCAGCTGCACGCTCGCGGATAAACTCGGCGAAGTCAAGCAATTCGTCCACCGTCACTTCCCAAACGTCGAAATGCTCAAGCCTCGGCTGTGCGATCCGGATGATGACCCGGTCAAACTCGTACTCGT-CGCTAAATGCGCGGTACGCCCCGTATGCGTAGAGCAACGCCTGGGGGTTCCCTTCCGCGAAAACCTGGACGCCGGTTCCATATTTCAGGTCGGTGACAATCAGCACCCGGTCACGAATGATGATGTTATCCGCGGTACCGCCCTGCGGGAGAAACGGCACTACTTCGGCGTCCGGGTCTTCCTCCAGCTCGTCAGCGTTGGCTGGTGGCATCAGGTCGGTGAACCAGACCCGGATTTCCGTCAGCATCATGCCTTCTTCGAACCGACACCAGTCAACATAATCCTGAACATAGTCGATCATGGAGCGGGTGACGACAATCTCATGCCGAACGCCTTTTTCCTCGATGACCTGCGTGGTTCCGATAAGATGCGTCGGTCGGATGTCCGTTTTCAGCCACTGCTCGGCGATGCCATGGGCGACGGTTCCTTCCGCCGCTTCATAGCTGCACTCGTCATCTTCGAAAAGGTTGGCCAGCAGGCTTCCGCCGCAGGCCGTCCACATCGCAGAGGCCGACGGCGCGAATATCGAATGCCCGCCGCCCGCAAACTCCTGCATAACACGAACCAGAAAGGACTTACT + GCCACCTGCTGACGGTACAGGTCGATTTGCTGCGCCAGCGCCGAGACGGTTTTATTCGCCTCGTTGAGCATTCTTACT-TTCTGAGCGACGTTCTCCACTTCCTTGCTATTGCGAGCCAGTTCTGCGGTAACGCCGTGTACCTGATTCTCAAGGCCGGACAGCGTGCGGCGCGCCGCTTCTGCCGGGCTGACGATGGTCTGGATCTGCGTGCCAAGCGGCCCGAGTTGCCCGGTTGCCTGCTGCACCACGCGGCCGAGGGTTTGATACCCGCGCGCCGTCGCCATCGCCTGATCTGCCTGCTGCTGCAATCCACGAATTACCTTCGCTTGTGCGGCCGCAGCGGCAGATGTTGAAATGATTTCGTCCTGACGTTCGAGGACACGGTTAACCTGCGCGACGCTGGTGACGATGCCCGCTTGGGCCGCCCCAACTTTCGACGTCTCGATCCCGTATCGTTCGAGGTCGCGGGTCGCCCGGTTGACACGTTCGGCCTGAGTCGCTTCCGCGCGGGTTGCGGCTTCGACCTGACGCGTCACCCGGGCCAGCGCCCGTTCCTGTTTCTGCGTAACCTTCTCGGTGGAGTCGTAGGCTTTCTGGAGATCGGCCTGTTTCTGGCGGAGTCCTTCTGTCTTGGCCGTCGCCTC---CGTCATGGCCTGATTCTGCCGTTTGAACACCTCGATCAGCGAGTTGAGTTTAAGCAGTTGGTTCCCGGCACTTTCCAGCTTTTTGTATGCGGCTTCCAGATCACGCGTCGAGATTTCACCGCGCTCGGCTGCTTTACGCTGTTCGTCCTGCGCCCTCGCCATCTGCT-CGATAGCATTGGTCACAGCCTTTAGGGGCTTCTGACTGTAGTCCCTCGCCCGGATTCGTAGCTCGACGTCTTTACTGTTAGCCATCAGATAATTCCTTGATTAGTTTTTTATACTCTTTCCCGCCTTTCTTGCCGTTGAGTACAGCGCCGATACAGGACTGCAT-CAGTAAA---CTTTGGGTGACATAACCCGCGTTTACCCGGCGCTTCGCGATTTTCGTTTCTGACCACAAATATCCTAACGGGTAATGCCGGGCGGCCGGGTGTCCCTCGGACATGAGGAAGGACACCGTGGCACGAAGGTTATTGTGGAAGTCGAGAACTATTTCGC----GCTTT-GAC-CGGGTTTCGACACCGCCTCTTCGCCCTTCATCTTGCCGATCTGCTCCATTACCTGAGCGAACATCTTTTTTACTTCTTCAACGTCCGAGAACGTCAGTCCGGCAATCTTCTTCAAGGCGTCGAATTGTACCAGCAG-GGGAAGCGTCTGAACCTTTTCCAGTTCGGCTTCTTCGTTAGCGGCCAGCGCGATAACGTGGGCCACCAGCCCCGGCGCATCCGATACCAGCGACACGGCGAAACGCCCGGTAGCAATGGCCGTCAGGTC--TTCCCCGGCGGTCTTCTGGTACAGGTCAAACAGGCCATCAAGGTCGTGATAGTGAACGCGAATGATTTTGGAAATGTCGTGGAAGGAAAGACCACGGACGTTAAACGAGCCA--GCCTTTTCGCCGCGACGGGCCGGGATAGTGATTTCTTCGGTTTCGGGTGTGTAGTCTGCTAATGACATTTGACGGATCTCCTTTGCGCTAATC--CGTCGTTAATGTAGCACATACTTGCAGA------TAAAAGAAAAGCGCCCGAAGGCGCTTTATCAGTTTGGCATGTATTACGGAGC---CGAGAAGGTAATGGTTC-CGGTAGTGGCCGCTTTGCCGTTTGCCAGCGTTGCGGTAACAGTCGCGGTACCCGCTGCGGTACGGTTGACCGTAGTGGTCGCCGTCCCGGTAGACCCGGTCGTCGCGCTGTTCGGCGTGACGGTGGCCCCGGCCACGGTGGTGAACGTCACCGCGTCGCCCTGTACCGCCGTGCCAGTGCCGTCACGGACAGTCACCGTACAAACGACACCCGCGCCGCCAGTGGTGGCCGTAGTCGATGCAGGCGTGATTTCGATGGTACGCTGCGTGGTCGGGTCAACCGCTGCGGCCGCTTCGACGATGTCGATGTAGACGCGCTGCGTGATGTTGTTAAGCTGCATGGCCTTGAAGGTGAAGGACATGACCTGCCAGTCGTCGCCTTTCAGTGCGTAGTCGCCGTCCGG-CGCGAGAGACACTTTCGGGAAGTAGTAGTTTTTGTTCAGACCAACCGGGTTATCGGAGATCATGCGCAGCGCGCCATACACCATGTTGGACTTGCCAATGACCAGCGTACGTTTCTGCGCATCAACGTCGTACTGGACGGCGATCTGCACGTTACCCGACAGGTCGGTAGAATCCGGCTCGATGTAGATGCGGCCCGCTTCCAGATCGATTTCGTAGTTGCCAGCCGGGTTAACGACAGTGGCACCAACGATGGAAGTGATGTCGCCGCTACCCACGGAAATCGCGATAGACGC-ATCGGCCTTAACCATCTGGAAGTTGGTCACGCCGCGAACA--CCCGTCGGGTTATCGTCGGTGGTACCGAGTTGGTAGTAACGGCCGCGCATAATCGGGTTGAACACTTCTTTCGCGTCGGTCTGCTGCGTCTGAGTGGTGTTAGATACTTCACCGAGGAACCACAGCGCGAGGTTATCCGCGTTGATGTTATCGCAGGTGAAGGTACCGCCCTGAGACGCTTCCAGCAGCACGGACGCATCCATCACGCGCATACCGTGATCGGAAGAGTAGTGATCCAGCGTTTCGGAATCGGTGTTGATGGTGAATTCCGGGGTGTTACCGAAATACATTTCACCAGTCTTACGGTTAGTGC-CGTCTTGGAATCGGTCAAAGTAGACCGTTCCGCGACCTACCACATAGTTATTCTGGTAGTTATCGTT---CATTCTGTTTCTCCTGTTAAGGATTCCTAATGTCCACTTTGAGTCCTACCCTAACAGGTAGGAAGAAAAACGCCGTATCGGACAAGCCGTCTTCTGGTGGTCTGACAACGGGCTGCGCGAGTGTGAGTTTAGCAATCTTCCCACCCAAGCGGTAGAGGGCTGGATACATCGGTTGCCCCTGCTCGTCCTTCGCCACCAGCATAGCCAGTCTTTTTTCCACCTCGGCCAGCAGTTCGTACGCCGGGTCGGTCGGGTTTCGCGGGTCGTCTTTGACCCACCCCTGTACCAGCAGCACCCAATCGTCCATGCGTACGGTCTGTTCCTCGTTGGCAAAGCTACCGTAGTCGGTGGCCTTCGCTTCGAGGATCGACACGATAGGCAGGCGGGCCGTGAAGTCCGCCCCAAATCGGTCGCGCCCGCGATACACTTTACCTTTCAGGTCATAAGCGTATCCGTTTGCAATGGTGATCTGTTCAAGGTGCGCTGTCAATGCTTTAAGAATGTCAAGCCTTTGACTCATTTAGACAGCCTCGCGAAATTACGGTGGAATTCTGCCGCTACCATGTCACCTATCTTCGGCGCGACCGTCTCGGACACTTCCGCGAAGACCTGATCCACCGACGGCCCGTACAGCAATGCGACGCGGCCCGGTACGAGCCATGACTTGTGCTGCGAGCGTTTGTTAGATAAGGATTCCCCGGCGGAAAGCCGTACGGCCAGACCGATGTTATAGTTGTCCTCGGTAAGACTGGCCCCTTTGTTCAGGCGCACCAGAAACGCGTTTTTCAGGTATGTCGTCTTACCCTTCTTCACGCGAACTTGTACGCCGCCGCCCCGTTTGCTGTTAGCGACCATTGCCCCGCCAGTAACGAAACGGGCGAGGCTGGTGGCGCGTTTACGCCCGGTAATAACGGCTTCGAGGTTGGTCTGAGTGGCGCGCTTAGTTAGCTTTAGGCGGTCTGCGTTGAGATAGCCGGATGGAAAGGCAATCTCGTCGGTCATCGACTTCTTGATAAGGGTCATGCCCTTGCCAGCAGCCACGCTATTAATCGCCATGCGGATCGAGTTGTTAGCGATTTCCGGTACCTGTTCCAGA--TACTCCTTCAACTCGTTGGAGCCAATCGCTAACACGTTAACAGGCATCAGTCGGCCCTCGCCACCTGCCAGACGACTTCCACTGGCCCGACGATGGGTTCTTGCGTTTTGAGAACCAGACGGGCGTTCTCGTATCCCTCGGCCGTCATTATGATGCTATCACCTTCGGACAGCACCACGCCTTTGACGGCCAGTTCTTCACGCGTGAAAATGATTCGCTCGATGCCCTCAACGATGTTCGCGTATCCGCCGTTTTCAAGATCACCCATGATAGCGATTTTGTTGTGCCAGCGGACGCTAAGACCTTCGACGATGACGTCCTGCGAATAATTCTCGTAGCGAGCAGGTACTGACAGGGACGCGTGTACGTCCCTGCGAGCCTTCGCTTTAATTGCTGCGAAGTTAGAAGCCATAATTAGACTTCGTCTTCCGC---GCCAGACTTTTTATCGTCTTTGGCGTTTTTCTTAGCACCGTCAGCCTTCTCGTCTTTTTTAGACGTTT------------CAG---CTTTCGCCTGCTGCGCTGCGGCTT---CCTGCGCTGCCTGATTTTCCACGTCAACTTCCATCACCGGGCGGCCAATGGCTTCCGGATTGATTTTGTTGATGCTTTCCAGTTCGGCCTGTTTGAAATCAAAGATCTCGCCGATGGCAGGTTTGATACGAGCGCCGTCGCGGTAAACGATGACGGTCTGGAGAACTTTACGTTTTGGCATGG-CTCTTTCCTC-AAATCGACCCGCCCGGTAAGGCGGATCGTACGGTTTGAATTACGGGTGATTAGGACATTACGGTCAGCAGGAACGACGCATTCGGGTCTGCCGGAACCATCAGTGGAGCGCCCTGAGACATCAGGTATTCCACGCTCGGGTCTTCCTGATCCCACATTTTCGGGAAGTATTCAAGCGCCTGATAGCCAGCGCCTTTATCCAGAATAGCACCGAAGCAACGTACGCCCTCGATCGCCGAGGAAATACCCATTACCGCTTTCTGCTTCATCAGGAACTGTTCTTGGTCGTTCTGGTCGCGGTATTTCTGAGTGTTCACCCAAATACGCATACGGCCAGCGCCGTTAGCCCCTACCAGTTCGCCCATGTACTGAACGCCTTCCACGTCATCCCACAGGCGGGTAACGTTGGTTTCAGAACCACGGATGGTCGAGTCCATCAGGCCATCTTTGCCCCACAGTTCTTTGCCGCCAACCTTGACGAACTGATCCCAAGCGTCGCCGCCGAAGACGTAGTCGCGGATCACGGTGCCGGACATGGACTTATCGGACACCAGACGTTGACCATCGCGCAGGTCAGCAATCATGTCCATCAGGGTGACGCCAGTCGCAGTCCAGTCGGTAGTCATGGTCAGCGCTGCATCACGGCCGAAGTCTACACGCACCAGCGGGTAGTCCTGACCCTGAACGTCAACGTAACCATACTGCGCAGCCTGCGCCGCCATCCATTCCCACGTATTTTCGTGCATGGCGCGGTGTTTCATCAGCAGATATGCGATGACACGGTCGCGGCGCTGCGCGATAGACAGGGTGCCAGTACCCAACGCTTCACCCGGTTGACGCGGGATGATCATGTTAGGGTCGATGACGTGTTTCGGCTTCACGTAGGCTGGTTTAAAAGTCTTCGTGTTGTAGCCGCTTTCTTTGATCACGCGGCCCTGTACGTTCGGTGCAACGAACGGAGCAACGCGGGTTACGTCCTGAATAACTTTATCGAAGGCAATCATGTCTTCCTGAAAGTTAATCTGGCGCGGGAACCATTGCAGGAAGAACGCAGGCAGCGTTTTCAGCTTGCGCTGTACTTCGAGCAGTTGGTAAGTAGTGTAAAGTCCAGCCATTTGCGCTGCTCCTTAGTACAGATTGCCGATGTGAATGTTAGTACGGTCGAAGACCGCCTGACGTTTAACGAGCGTATCAACGGTCGCAGGCCAACCGAGGGCCGCGTGGTTGAACACCCCGCCAATGTAGTACGGCACGTTCTGGCCGGACTTCGCTGGCTGTGCT-GCGATACCAATCGCCGTTGCTTCCGGGGCGTCAGCGGTAGTCGGGTCGTACGGCACCATCGCGCCAGCGGCGTTCTTCGCGATAACCTGATAGATCGCGATGTCAGCGCCAGCGACGCTACCT---TCGGTCACAATATCGGCTTCGCCTGCGAAGATTTGGGTTGGCTCCCAAGAGCCGAGGTCGCCATTTCCCGCCAGATAGTTAGGCAGGCTGGTCGCGGCCATCATAGTCA--AAAGATTCATCCGAAGATCCCCTATTACTTAGCCATGTTAGAG---CCAGCTACAGCGGTCATTGCCGCCATCAGACCAGCCGTTTCTTTCGCGCCTTC---CTGCTCGTTGCCAGCGTCGGCACCAGCGTTAGGATGGTCAGCATTCGCCATCACGGTATCGAACGGGCTGTCACCCTTCGCTTCGGTACCCGGTT--TACCCGGCGCGGCAGCGTCAGGGGCCACGGTGGTGACTGCGGCTTTCGGTTCTTCGGCGGAATTGGTCAGCATCGCAGTAGCGTCTTCAACGGACATATTCGTGTTGAAGGCGATATGGTTTGCCAGTTTAGTGCGG---TTAGCCGCTGCATCGCAGCCCATGATCCCGGCAATGCGGGTTCGTTC----------GTTG-----GTCGCCGC--------------CT-CTGCG------CGGGCTGCGTCCATTTCTTCTTGCGTAAAGCTCATTGCGTTCGCTCCTGAGTG---ATCCGGGCTGTTATCGGACGGCCCGTTGAGGAATTCGGTAACAGCCTTCGAAGGCGTTGATACCGCGTCAATTAGACCGATTGACATCGCTTCACCAGCGTTATAGCACATCGCTTCGGTGTCGCGCACCACTTTCGGATCTAAATCCCTGTTTTGAGCGACAAGATTGACGAAGTCGGTGCGCATTGAATCCACGCTCGCTTGCCAGTCTGCTCGTACTTCATCGCTCATTGGTTCGTACGGGTTGCCGTCGGCTTTGTGCTCCCCGGACTTAATGATATTCACGGTGATACCGATATCCGCCAGCATCTTCGACATGTCGATGTGAAGGGCGATAACACCGATGCTTCCGGCACCGCCGGATGGCGTTACAACGATTTTATCCGCTGCGCTTGCCAACGCATATGCCGCAGAATA-GCAGTTTGAATCGACAACCGCCAGCGAAGGTTTCTCGCCGCGTGTATCAAACATTTCCTGAGACAACTCGAAACAGCCCGCCGCTTCCCCGCCGTTCGAGTTGACGTCGTAGATAATCGCTTCGACATCAGGGTCGGCCAGCGCTGCATTACGCTGACTGCGGATAAAATTGTAGCCCGTCACGTAGCCGTAGTAATACCCGCCGTAGCGGTTAATCAGGGTGCCATGAATCGGGATGATGGCGAGGCCGTTGGAAAAGGCGAAAGGTTTGT--CCGCAGATGGTCGGC-CTACGCCATACGCTGCACACAGGTT-----TTCGCGCATCTGCT----GTTCAGCGCGCTCCTG---AAAGTCTTCATCATCACAGGACATCATTTG---------CTGCATATTGGTCAGCAGCGTCGGGTCATTCTCGCGAATGGCGATCGGCTGGCCGTTCATACGACTGAGC-GC---CATTGAGACGCTCGCTCTTACGTGGTTGC--TCATTCCTTCGGTTCCTCTTCGTTGTTGTCCGA-GCCAGTGCTGCCAGTTGAACCGCTTGCCTCCGTCCCTTCGACCATCTTGCCGGAGAAATCAAGGCCCAAATCTTTGATGATGCCTTCTTCGCGGGCGCGCTGTTTGAATACTTCGCGGAAGTCTCCACCGAGGCGGGCGATTTCTGCTTCGTACGTTGACAGGCCATTCTTGATGCGAAGGATAGCGGCTTCGGTTTCTTTCTTCTCGTCGATCTGGCCGCGACTCGCGCCGATCCATTCTGCGTTACAAAGTGCGTCACGTTTCATCGGGTCGTAGAAGTCACGCCAAGTGAAGCCCGGCGGCAGTGGAACATTACCAGCGTTGACCTCTTCTTCCAACCACAACGTATAAATCATCGAAGCAAAACGGTCGGCTACCAGCTTTTTACGGCTTTCCATGTACTTCCACGTTTCAGCCATCGAAGCGCGGGCAGAAGAGTAGTTCGTCTTCGTATAGTCGCGGCTGAACTGCTCGTACGAAAGGCCGAGTGATGCGGCGATGTTCCTGAGCAACGATTCTTCATAATCGGTTCCGACTCCGCCCGGCGTTCCTGCGGGCTGCATTTTCAGTTTCGTACCGGGGAACAGGTGCGGGATTTTCGCCCCGTCGATTGCGATGTTTTTCGATCCGGCGATGTACTCGGCCAGACTCCCCATGTAGGTTTTCAGGATGTCGCCGAAAGGCG-TCTGCCCCATACCCATCTGATTGAAGACCACGTCCGACGGCAATTCGGATTCAATGGCCGCAGCGTAGGTCGCGTTGACGATGGCGTTTTGCAGCGTGACTTCCTGAAAGTTTCGGGTCATCTTCATCTGCTTCAACGCGGCGACCATTTCACTGATACCGCGAGTCTGGCCCGGCAGCAGCGCTTCAATGATGTGGATCATCCGACGTCGGCCCCAATCGAAACGAGCGGGCTGATATTCCCATCGCCATTGTTCG---AGGTCAGTCGGGTCGCCCGGGAACGCCTTACGCAGCCAGTAGCCGATCGGCGCACCCATTTCATCCAGTTTGACGCCGGAGCGCAGATACTTGTCG---TCCATGATGTTGTCCGGGTTGGACAAACGGTATGGCGAAATCATCTGGATCGCTGTGCCAAACGGACGGCGCTGCAT-ACGGGTACCCTTCGG----CTTCATCCACTCGCACGACGCCAGAACTTCCCCGGTCATGATGAAGCCGCCAACGGCCAGACGTACAAGCCCGGTCAGGGTGTTCATCCGGCGGGCATCGAACCAGTTTTCAGGAGACTCGGCCACCATGTTGAAGCGCGCCTCGACTACCTCCTGAAATTCATCCGCCCACCCTTCCGGCGCGCCGAGAACCAGCGAATTCGGTTTCGAGTTGAGTTTGTACTGCGAGCCGACCACGCTGTCACGGTGGATCGCCACCGCGCCGAACGCGTAGCCGTCGTTCTGTACGATGTCCTGAGCACGCGAAAGCGCCAGCGTACCG-TCTTGGGCGATCTGCTGGTCGGGTGAAATGACGGCAGGCGTCCAGCGGAACATTTCACGCGTGTTCCGTTCAGCCCCCTCTAAGCCGCCACCGAGTGCCGAAGGATTCTGCGGCGTGGCGTCCAACGTAGCGACGTCGGCGGTCTTTGCCACTTTCTTCGCCCGTTGTGTAGTGCTTCTCTTTTTCTCGGTCATGGGAATAAGAATCCT-GCTGGTGAACTTGGTAGGCCCATGAAGGCCGCGCAAGGGTTGTCCGAATTAATCGCGTTTTGCAGTCGAACGATGTAGGCCCATAGGCTTTGTCGGTTCGCTGCGGTATATTCCACGCGTTCACTGTTCTGATCCACCACGACGCGTACCGAGCCGCCGAGGTTTAATTGGTGGTACGCATCCATCGCTTCTTTGAGCATGAGGCGATATTGCGCGCGGCATTCTTCTGGTGTCATGGTGGTTCTCCT-ATGCTAACGCCATTGCG---AGTTTCTCGAAACTGTATTCGGTATCT-----TTCGGCGCATCAATA-GGTTCATCGCTCGGCGGTAAAATAACCATGCTGTTATCGTCCCACTCCGCCGCCCATGATGGCGGGTTGTCCCAATCTATTTGTTCAATCCCGAGCACCCGGCCGCTGACGCAAATACCCAATAAATAATACGCCAAGTCCCACGTTTCGTTTCGGGCGTGCGCCGGGTTGTGCCAGCCTTTCTCGTCACGCGTCTCCGTACACAGTTCGGCGAATACCGCGTCGCCC---ATCCAGTCCGGAATGTGGTACATGCCTTTTCCCGGCTCCACGACGTCCAGTCGGCCGTTCAGGCTGTCTTTCATCACGTTCGAGTTAATCATCAGCACCGGAACGTCGCCGCGTGCGATGGCCTTTTTGTCTTTCTGGTTGGAGTCCGGTAGCGCCACGCGGGTACGCGGGTTGTTCGCTTTCGGGTCGCCCTTCACCAGACAGAAGCGCCCGGTTTTCCCTTCCTTCCGCAGTTTCCGGAAGAATTCGTACGCGTTGCCAGTTACCCCGGCTTCACCGCCGGAGTCGCACGCGGTCATCTTGATCGGCAGCGAACGGCCAGAATCATCGGACAGCAGGTACGTCTTGTTCATCACTTCGGTTTCAATGAGATCCCAATCTTCGAGGTATGCGCCCGGGTGCAGGATTTTCGGGTCGCCATCGTCATCGAGGCGGCGCGATTTCGTGATATTGAAGCGGTCGATCAGGTATGTGTCGAACGGGTAGCCGGGGGCCACGCCATGCACCGACACTTCAAAGCTATGCTTCTGCACGTCAACCGTGGCCGCCAAGAAGCGCACGTTCTTCGGCACCGTCTGTTCCGGCCACTTCTCGGCTCGGGCTTTCAGCGCTTCCGGAACGCGTACCGTCTCGATAGCCTTCGGCACGTACGGTTCGCCCATGTCGTTGTTCCAGAATTTCTTCAAGGACTCTTCGGACATCGTACGCTCGTAGTCATCCATCGCATCGAGGTAGTTCAGAACCAGTTTCTGCCATGTGATGAACGCGGCCGCCGTTCCGCGAAGCCAGAAGGACGCGAATGACGAGCGCATCGGCACCCCGGCCAGTTGGCCCAATTCGTTGACGTGACAGCCTTCCGGCACCCACATCCCCCACAGGTTCATTTCGTATTTGTCTACCGGATCGATTTCGCACCCACAATGCGGACAGACCATGCGCACCGTCTCGGACTTTTCGAGGTTGGTAAGCGGATTGCCATCGGCGTCTTTCGTGTTCCACTTCAAAAGCTGGAAGGTACCTTCGAAATACTGGTCACAGTGCGGACACGGCCATTTCCAGCGTCGGCGGTCGCCACGGTTGTATAACCCGACAATCCCGTCGCATGGCGGGGCTTCGTGCGGCGTACGCTTAATCCAGTTCGGGTCTTTAATCGGACGTGATGGCGAGGACTCGGCCGCACACATGGCAAACGACCCGAAGGTCGTCGTACGTTTTGATGCGAGGTCGAAGGCGTTACCGTCGCCGCCGATGTCGTCGTCGATACGGTCATAGTCGGTGATGATGATACGGCCAACCGGACGGCCCGCCAGTTCGGTCACAGACGGGTAACTCAACGTCAGGATGATCCCGGTAACGTAGTGTTTGTCGAACTTGTTATCAGCGTCGCGGTTCTTCATCAGCATTTCGCCCACTTTCGGGCTATGGCGATGAAGACGGTCTACACGTCGCATTGAGAAGTCACGCGCGGCCGTTGACGTCGGGCAGTAGATCATCAGATCCATCGGGTCAACTTTCACCGAATAGACAATGCTATTCAGGATCAGCGCATCAGTTTTACCGGACTGTGCCGGGCCGACAAACGCCATCTTGTCGTACGCCCGGCTGTTCATCATGTTCATCGGCTCAACCATGTACGGCGTGGTCGAGTTTAGCCAACCCCCGACGTATGCGCCGGGTTGGTTGACGTAGCGATACTTGGCGGCCGCGTCGGCCACCGTCATGCGCATGGGCGGCCGTAACTGCTCGGCCACCGAACTGATAATCTG----CCCGATGCTCTTAAACTTCATCGTCGTCCACCTCGTCG--CCGTTGAACTTATCGATCAGCGCGCTCGACAGGTCGTTCAGCATGGCGTCAATGGATGACGTGATGACCTGACGTTGCGGCTCGCTGAGTCCGGCCTGACGCGCCAGCGTGTCGGGAATGAGCAGCATCGACATGCGCAGCACCTTCACCGCCTCGCCGAAGTGCTCGATCACCTTCTCGGTTTCCCACAGGTTGCCCGCTTTGATATCGAAGTCCTGCTTTGCGCGCTGCCCGGCCCAAAACTCTTTCGACAACTCCTTCGGCAGATCCTTGAAATTCATGCGGCGCAGGTACGTCTCAACGTCGTACAGCGGCTTAACGAGGTACGGGGCCACTTCGTGCACCGCGTAGATCGGGTACCCGCCGCGCTCGCCGACTGGCGGGACATCCATGATTTTCGGCGTGATGTCCCGGCGCTCCATGCGGAACAGCTTCGCCAGTTGCGTGATGTTGCAGCCCTGAAAGATCATCGCTTCGGTATCGGCGTCCGGCGCATTAGAGCGGCGATTCCGGGTTGCCAGTGGCGCA---TTA---CTCTTCGTCATCCCATACCCCTTTATTTTTCGATTTCTTGCGGCGTTTGATGCGCCCTTTGATACGTTCGAGCAGTGCGAAGAACGCGTCCTGCACGTCTTCCTTCTCGACCAGCGCCTGTATGACGACATCGTCGGCTGTCTCGGCCAGAAGC-CCG--TTCGGTGTTCGCAGCATCGCCTTGAACTGGTAGATCGTAACCGGGAACTTCTGCCCCTGACGGTGCAATCGGCCGTTGAATTGCAGGAAGCGTTCGAGTGACCACGGATTGTCGATGTAGACGATGACGTGGCCGCCATGCTGGAGGTTTAGACCGTGTCCCGCAGACTGAGGGTGCGCGGCCAGCAGGCGAATCTTTCCGGCGTTCCACTTCTTGATGCACTTGCCGTCATCGTCCATGACCACCAGA--TCTTT----AAACCGCTCTTTCAGTCGTTCGAGGGTCGGCTTGAAGTGATAGGCGATCAGCACGTTTTTGTCGGCCAGCGTGGTTTCCAGCAATTCTTCCAGCGCATCGAATTTCAGGTCGTGCAGCCTGTACGTGTCCTTCTGCTTGATGACCTTGTCGTCTTCCGTGATGCCGACGATTTTCGTGTCGTAGATGAAGCCCGAGCACATCTGCAATAACTTCGACTGCAAGGACGCCGCCTGCTCCGCCTCGATC-ACAATCGGGTCATCCAGATGTTCGTCGAAATCTTCCGGCATAATCTCGACAAGGCTTTCTTCCTCCATCATGCGGTACCGCTCCGCCGTCTCCCCGTCTAACTCGACCGGGACAGGAACGAAATTCGGTTCGTGCATGTCAAGGTAGTCTTCCGCTTTCATGACTAAACATATATCAGAAATCTTCCGAATAATCTCGTCTTCCGCGCCTGGGCGCAGTTTCCACTTGAAGTTGTATCGGTTCTGCGTGAAGTAGTTTTCCTGATAGCCCCCGATGGTGGAGCCAAAGCGCTCGCCTTCATCCAGCAGGTAGATTTGCGCGAAGATACCCATGTACCCCTCGGCCGCAGGCGTGGCCGTCAACTCGACGATGCGTTTGATATACTTTCGCACCCGGCGCAGCATTTTGAAGCGCTGCGAGGTGTGGGATTTGAACATGCTCGACTCGTCAAGCACTACGGCGTCGAACGGCCATTTCGTTTTGAAGTGCTCGCACAGCCACGCGATGTTATCGACGCTGACCGTGTAAAAATGGCAGTCCTTGTTCGCGGCCGCCGCTCGCTCTTTG--GCGTTCCCGGCGATAATCGACATCTTGTAGAAGCACAGATGGCCCCATTCGTCGAATTCAGTCGGCCACCCGGTACGGGCCACTCGCTTCGGCGCGACGACGAGGACTTTGTTTATTTCGCCGTCCGCGATCAGGTCGAGCATGGCTGTCCCGGTCATCACGGTTTTACCCAAGCCGAGGTCTACGAACATGCCGCAGTACGGATGGTCTTTGATAAACTGGACGCCTTCATCCTGATAGTCGTGCATGTC--GCTGCGGTTCAGTTTAACCGTCCGCAGGCAGTACGCGAGCGCTCTACTCAAAGGCGATAATGTAGTTTTTAAAGTCTGCAAAATTGTCCACCCATGTCACGTTTGCCCC---GGCCTTACGCATTTCCTTATGGCGGTGATACTGCTGCGCCGTTGGTTCTTCGCCGGGGCGTTTGAATTCGATAAAAAGCACAATGCCGCCACGGATCAGCACGCGATCCGGGACGGCTTTTTTGCCGGGGGCGGTGAATTTCGACACCCACCACCCGCGCCCCTGCGCGTATTCGCAGCAGCGCTTTTCGACCTTCGATTCTCTG------------------------ATTATCGGCT----CGGC------------------CATGTTAATCCTTACGGTAGAAATAGCCTTCCCACCCGGCAGCGCCAAGCGGAAGCCCTTCGGCCCACGGCAGTTCGGCCGCCATGCAGGAGATCAGGTCATCCACGGTCAGCGGGCTGTCTTCCGGCACTTCGGTTACGATTTCATCGTGGATGTGCATGACGATGCGGAAGCCCATGCGGTGCGCCTTTTTCAGACCTTCGGCGAGCACGTCGCGCGCCAGTGCCTGAACGATGTTTTCCACCAGCTTACCGCCGTGACTGTAGATCTTTCCCCACTTGGTGCCGCTG---CCTTCCACCTTGCCTTCGTACTGGAAGTTGGTCTTTGTGTACTTCTCGCCTTT-CTTCGGCCCCTTCTGAACCGTCATCTGGCGCTCGACCAGACGCGGACGGAAGTAATACATTTTGCGGCCAGACGGCAGTCGGATGGTCAGGAATGGCTTCGTGTATTCGATGATCAGACAGCCCCACACGACGGCCTGACGGGTACGGATAACCTTGAATACCGCGTTTTCGAGGTCATACCATGCGCGCACAATTTCCGGGCAAAGGTCGCGGAACGCCTGCACCGACTCTTCGGCTTCTTTCTGCGTCATGTGTACGCCCATGTTTTCGGCATAGCCCCACAGTCCGGTCTTCTTGCCATTCTCGTCCATGTGGCCGCCGCCGAGGCGATAGCCCGCGCCGAGGGTAGCAGGTTTGGCTTTCGAGCGGTGTGGCTTCGTCTCTTCGTACGGCAGGTGCAGCCAGTGAGCCGCGAAGGAGCGGTAAAGGTCGTGCTTGGCCGCCAGCGTGTTCATGAACCATTTGCAGTCCGTAAGCCATCCGATAACCACGGATTCGATGGACGACAGGTCAGCAACGATGAACTTGTGGCCCGGCGTCGGGATGAAGGCGGAGCGGATGCAGCCCACCAGCGCGTCCATCGGCTCACCAACATACAGCGTCAGCGCATCAAGGTCGCGCTGGTGGATCATCTTGTTGACGATGGACAGGTCGGTCACGTCCTCGATCAGCTTCGGCGTTCTCGGCAGGTTTTGGGTCTGAATACGACGGCCAGCCCAACGGTTCGTACGGCTCGCCCCGGCGAATTGCAGTGAGAAGCGGAAACGGCCATCCTCGCCAGCCGCGTCAATCATGGTCTGGTATTTGGACAGGGAGTTTTTCGCGCTGTTCAGTCGCATTTGCAGCACGCGGATCGCTTCCGGGTCAACGCCGTTTTCATCGGCTTCACGGATGACCTTGTTTACGGTGTCGCTGCGGAGATCGCTGAACGGGTAGCCGCGCTCTTTGAGCCACGGTGTTAACTGCGCCGGGGAGTTTGGGTTGTTCAGGCCAGTGATGTCGGCCATTTCTTCGATAATCTGCGGTTTGCGCGCTTCTGCGAGGGCCAGCGCCGAGTACGCGAATTCGCGGTCAATCATCACGCCTGTGTCGTTGATGAACTGATCCAGCGCGTACATGTCCCACT-CGGCGTCCAGTACCGGGTACCGCATCAGGCGCGCTTTAATCGCCAGTTCGGTTTCAACGTCCCGGATGTTATATTTGCAGAAGTGCCACCAGTCTTCCGGGTCGGTCGCTTCGTTGCGCCACTCAAACGGGTTTTTCTTCGTGACGCGCTGCGGCTTGCTGAACAGGTCGATCAGGCGCTTGCCTTCCGGGTCTTTCAGTTTATCTTCCGGTAAGCCGATCTGCGTGCCGACGGCCAGAAGGTCGCCCGCGAAGCCGAGCATGTAGGCCAGCGCCATCGTACAGCGCCACGCTTTATACGGCGTTTTTATGCCGAGCACGCGGTGGGTCATCACGCGTTCGAACTGCGCATTAAAGGCCCATTTCTCCACGTCCGGGTCTTCCAGCGCTTCACGCAGTTCGCCGGGCAACTTTTTGCCTCGGTGAAGGTCTACGTGCTGCACCGCTCCGCCGTTGATAGACCATGCGCCCATCAGCACTTTCGTCGATTC-GTCA-CTCGAATAGCGGTCGAAGCCGCTCGTTTTAAGGTT--CACCCGGCTTCGGGATTCATAGTCAAGATTAATGCAATCTGCCACGTCAACGCTCCTATATGAAAAAAGCCCGCACACGGCGGGC------CTTGAATTACCGCCCG--AGGGCGTAAA-----------TTAA---------ACTTCGTCTTCCCAATCTTCGTCTTCATCCCACGCATCAGACGTGTCAACGCGACCTTCACCGAACGGTTCGTCGTCTTTGCGCTTGAGAACGGAAATCAGGTTGGCGTTGACGCGTTTGCCGAATTTGTTTTCCTGCGACCACGGACGGATGACGACAGACACCCAACAACCGCCGTAGATCTCTTCCAGAATTTCGGAAGAAGTAGTCAACTCTTCGCGCTCGATGTTATACACATCCGGGCGTTTGCTTTCGCGCGCTGAGATAACCCACATCCCTTCGCATTCCGGTTTGTCCGGGAAATCGGTGTCGCCGTCTTTGATGAACAACATGGACGGAGCGACTTTAAGCGCGCCTGTCTTGTGGTTCTTCTTGGTGACTTCGATCTGCTCACGGATGATTTTCTCGATCTCGCCGTGGCTTTCTTTCGGCATCAAAAGCGTCAGCGA----GTATTTCGGCTCGCCGCCGTCTTCGCCGCCGTACGGCTTATCGAGGTGCGGGTAAGAAGCACGTACGTTAGAAATCTTGATGTGACCAGATTTGTACAGCACGCCATTCTTGACTTTCTTCGCAGGGACTAATTTCTCGGCCATCTTAATATCCTCGGTTTACTGTTTTACGGGTTTACTTTCTACGGTTCTACGGGTTTACA---CTTCGTCATCATCTTCGTCGTCCCACGCCCCGGAATACTTGCCGTCCAGTGGTGGCCGCTTATCGGTCAGCGGTGCCAGTGTCGGCTTGCCTTCCGGCTTGTAGACTATCCCCGCGATGATGTTCGGCGCGCCAGCCCGGGACACGCCCAATTCATCCCTAAGCACTTCTTCCATCTGCGCCGGAGTACGCAGTTTGCGCTCGATGTACTTGTCCTCTTCGATGTCGAGGAACTTGAACAGCGCGATCGCATCTTTCTCGTTGGCGAATTTG----CGGTTTGTCCGCGACTCCACCAGCTTTTGACCCGGTACCTTCTCGCCGTTCATTGCGCGG--CGTTCCAGTTCGAAATCAAGGCGCGAGAACCAGTTTTCGACCACCTTGCGGTATGGCAGGATCTTCGCCATCTGCTCGGTTGTCAGGTTCCCGAACTGCGCACGCCGGAATTTATACTCCTGCGCCAGCGCATCACGCAATACTGACATTTCTTCCTCCCCGAATTCGGATTCAAGGAATTCCACATCCCCGCCCACCGCGCATTCCATCATGTACGCTATCGCTGCGCAGTTATGTGCTGCCCGGCAAAAGCGACACCCTTTCAGGGATGCGCGGCGCGGCGCGGTAAGGCTCCATGCCGCTGCAATCCGCTCCCGGGCGTACTCCGCAAACTCCAACAACTCGTCAATCGTGATTTCCCACGTATCGAAGTGGTCGAGTCGCGGCTGCGCAATCCGGATGATGATACGGTCAAACTCGTATTCATCCGCGAAA-GCGCGGTACGCACCGTACGCGTAAAGTAGCGCCTGCGGGTTCCCTTCCGCGAAAACCTGAACGCCAGTACCGTATTTCAGGTCGGTCACGATCAGGGTGCGGTCACGGATGATGATGTTATCCGCCGTTCCGCCCTGTGCGACAAAC------------TCTTCCGGTTCTTCGTCAGGTTCATCCGGGTTCGCTCGCGGCATCAGGTCGGTGAACCATACCCTGATTTCCGTGAACATTTCACCCTCTTCAAATCGGCACCAGTCCACATACTCCTGAACGTAGTCGATCATTGACCGCGTGATAGGGATGTCATGGCTGACATCGCCTTCCGTGATCGTCTCGACGGTACCGATTAAATGGGTTGGCCGGACATCCGTTCGCAGCCATTGTTCGGCGATTCCGTGGGCCACCGTTCCTTCCGCCGCCTCGTAGATGGTTTCGTCATGCTCGAAAAGCCCTGCTATCAGGCTTCCGGAACATGCCATCCAACGCGCTGACGCCGAAGGCGCGAAGATTGAGTGACCGCCACCGCCGAATTCCCGCATGATGCGGACTAACAGCGACTTACT 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AAAACGGCCCCC-GCAGGG-GCCGAGTTACACGATCGAAGATTAAACGTCGTCTTCTTCGGAGTTGCCTTCGTCCTCTTCCTGTTCGGCCAGTTTGGCTTCACACAGGTCAAAGATCGCGTCGAAGTGTTCTTCTTTCGCTTCGGCGATTTTGGCCAGGCCGAATTTCGCGGTGATCTTTTTGGCTTCCGGGGCGCCAAAGCGGTCTTTCACTGCAACAACCGCCGCCACCACTTCGTCTTTGGTGTGTTTCGGCTTGTCTGCCGCAGCAGTG---GTTTTGCCTTTGGTGGTGGTTTTA------CCTTTGGCGGTGGTCTTACCGGCGCCAGCGTCTTCACCTGCTGCAGCGGAAGAAGCACCGCCATTC------GCCAGCAGCTGTTCCAGCAGGGAGTTGGTTTTTTGTTGTTCGGCCAGCAGCTGTTCAAAAATACCTGACATAGTTAAATCCTC-GTTCGGT--TAATTTGGGTTTGTCGTGTTGACGGTTTGGAGTATGGACTAAATGCCGAATTAC-GTCAAACGGTTTTTTTCGAAGTTTTTTGATTTGGTGCCTCAAAATCTTGTATTCTGGGCGTAAGATGGTTGCGGCACCGGACTAAATTGCCAATTTGACAGATTTACGAGCCGGATATACTATCAGCAAATCTATAACGCGCACACATGCGAGGACTTGGGCTATGCGATTTCCGAAATGGGCGTTAAACGACGACCGAATGAAGGTAAAATTCCTAATGACACAAGCGGCATTAGAGATCGATCCGAATGCCAGAATGGCGGATTTAGCGAAGGTCGCGAAAGTGAGCTATTCGACACTTTTATGGGCGACGCAGAATAACGTATCGAGCGCCGTGGCCGAAAAAATTTGCAACGCGGTACCGCTTACCGGAATCCGTCCCCACTGGCTGACTAACCCTTCTTGGATCAAAACGGACAGCGAAACAGGGGAAATCCTCGAATGAATTACTGGCAAGAGTATGGCGAAACGCTTTGGGTGAATGGGTACACCGTTGTACCTATCTACACCCCGGACGCCGATAAGAAGGGCGCGGGTAAACGCCCCATCGGTAAAGATTGGGAAAGAACAATTAACGATAAGGCGCAGATCCAGCGTTGGGCGGAACGCTACACGAAAAACGGCATCGGGATTCTGACCAAATACACCCCGGCGGTTGACATCGACATTTACGATAAAGACGCCGTGGCGCATATGGCGGATTGGGTGCTGGAGAATGTTGGCCGAGCGCCATGTCGTATCGGACGGGAGCCAAAGAAACTCTTTCTGTTCAGGACGGAATCGCCATTCTCGAAAGTGAAGTCGGGAGTATGGGAAGACGACTTCGGCCAGCGCCATGCGGTTGAGATCCTCGCTGACGGACAGCAGTTCGTCGCCTACGGTATCCACCCCGACACCAAGCGCGATTATTACTGGCTTGACGACGAGAACCCGCTGAACAACGCAGCCGATCTCGACCTCGAAGAGATCAGCCTCGATACCGCGCGTGAAATCGCAGCGGAGTTTGACCGTTACGCCAAAGAACAGGGCTGGACGATGGTCAAGCGACCGATGAACGGATACGAAGCGGTCGGCATAGCAGATGAAGAGGATTGGGCTGCTACGGCGGGTATCAGGAAATGGGACGGAACGTACGAAGACCTGCGCGAACTCGTCATGAAGTACCCGAATCCGGAAAACTATGAGAACTACATCAAGGTTCTTGCCGCGCTGCAAATATCCTGCCGGGATCAGGACGAAGCAAAGTCCATCGCACGTGAATGGGCCATGCAGGCTCATAACTTCGACGACGGTGACTTCGACTATAAATGGGACAAAGGCTTCTCGCACAACGCATCCCGCCTCGTAACGTTAGGGTCGATCATCGCCGAAGTGCGTGAAATCGAGAAAGCCGAGCAGGAAGAGAAGGCCATCGAGTACCGCGAGGCATTTGCCGAGTGTACTGACGAGAAAGACTGGAACGCATGGGCTGAATCCCTCCGTAAAGAGCCTATTTTCGGCATGACCCGCAAGACAATCGTCCAGGTTGCAGCCGAAGCGTACCTACGGATCAAGAATTATCGGATGACTGCAAGCGATAAAAAAGAGCAATTAGGCTTCGATTATGGCTCAAAAGAAATGCCGATTTGGCTGAAAAAATTCGTTTTTTCGGAAGAAAACGACTGTTTTATCGATAAAACGACAGGATCGTACATTTCTAAAGGGGCTTTCGACTTCGCGTACGCAAATATGTGCAAATTCGAGGAAGAAACGATTAAACCCGTCACTTTTGCCTCGCTAGTAAGGCCGATCCCTGTCGTTTGTGACGCCATGTACTACCCGGCGATGCACGGTGATATGGAAGAGACGTTGTGGAAGCCGAAACCCGGCATCAACGGTCCGGAATTCTTTATCGACGAATCGGGTAAGACGTGGCTCAATTCTTTCGACCCGGATTCCATTCCTGAGCCTGCCGACGAACTCTCACCGTACGATAAAAAGGCGGTGGAGATAATCAAGGACTTCTTCGTAGTGCTTTTCCCGAATGACAAGGAACGCCGATACGTCATGGACTGGATGGCTTGGATTATCCAGCACCCGACTAAGCGTATCAACTACTCGTTACTGATTCGCGGCGCTCACGGTTCGGGTAAATCGACGTTAGGCGTGCTCATGTCGGCCATGTTAGGTCGCAAAAACGTGGGTTACGTGTCAAACACCGTGATGAACGGCCGTTTCACCGACTGGGCGGAAGGCCACATCCTGAAAATCGTGGAAGAAGTGTACGATAAGGGCGACCGATACAGCGCCATCGAACGGCAGAAAGAGTACATCACCAACGACCGTTTTCAGGTGGAACCGAAAGGCCGCAAGCCAAAGGTTGTCGTGAACACCAGCAGCAAAATGATGTTCACCAACCACTTTAACGCGTTGCCTCTCGATGAAAACCAGCGTCGTTATCTGGTGGTGTCCACACAGGCGGAAAATCATTTGGACATGGAGCGGGTATATGGGTCTAAGGCAGAACGTTCGCGGTTTTTCAAGAACGTGTACCGGGCGATCGATAACCATGTACCGGCGTTGAAGAAATGGTTCCTTGATTGGGAGATCAGCCCGGACTTTGACCACAAAGGTCACGCCCCCCAGGACACCGAAGCATTTTCGATTATGGCGGATGCTTCAAACGACGGCGTGGAAGGTGCGGTGGTATCTATGTTGCGAGAAGG-GACGACACCTGGCGTCCATCGGGACATCATCTTCGTGCCTGCGTTGCGAGACGCATTCCTTGAAACCGAAGACGTCGAAATGCCGAAGACGTCTCGCCTTAAAAACATGCTTATGGAGATTGGATTTAAGCCTGGAGGCGTACTTAAATTCGGCGGAAAGTCAGGGCGTGTGTACGTCAGAAAGCGGGTGAAAGGTGCGTATGACGAATCCGGAAAACTGAATTCAGAATGGGCGCAAAAAACGTTGAAAAAGCATAACGCTGAGGTGGAAAAAATCATC--AGTAA-CGT-TACGCATAGCGAGTGGGATGACGAAGTTTAACAGACATAAAAAGGCCGGGGGATCCGGCCTTACTTTT + AAAACGGCCCCCCGAAGGGAGCCGA--TGCGGGGCGAAAGATTAAACGTCGTCTTCTTCGCCGTTACCGCCTTCGTCTTT---TTCAGCCAGTTTGGCTTCACACATTTCGACGATTTCGTCGAAGTGTTCTTCCTTCGCTTCCGCGACTTTCGCGAGGCCGAAGTGAGCGGTGATTTTCTTGGCTTCCGGCGCGCCGAACGCGTCTTTAACCGCAACCACAGCCGCGACTACTTCGTCTTTGGTGTGTTTCGGCTTG---GCCGCTTTGGTTTCAGTTTTGGCTTTAGAGCCGCCTTTCGCGCCGCCTTTGGTGGTGGTTTTTTCGGTGGTTTCG-CTGC--CAGCGTCAGTGTTTACCGCGCCGCCTTTCAGTGCTGCCAGAACGCCTTCCAGCAGGGTGTTGGTTTTTTGTTGTTCAGCCAGCAGTTGTTCGAAGATACCAGACATAATTTTCTACTCCGTTAAGTGTTTAAAAGGTCGTGTCGTGTTGACGGGATGAAGTATGGCCCAAATGCCGAATCACTGTCAAACACTTTTTT-CGAAATTTTTTGATTGGGTACCTCAAAGCCTTGTATTCCGGACGTAAGATGGTTGCGGTACCCGACTAAATGGCCAGCTTGACAGATTTACGGGCCGGATATACTATCCGCAAATCTATAACACGCACACATGCGAGGGCTTGGGCTATGCGATTTCCGAAATGGGCTTTAAATGACGACCGGATGAAGGTCAAATTTCTAATGACACAAGCGGCATTAGAGATCGATCCGAATGCCAGAATGGCGGACTTAGCGAAGGCCGCGAAAGTAAGCTACTCGACCCTTTTATGGGCGACGCAAAATAACGTATCGAGCGCCGTGGCCGAAAAAGTTTGCAGCGCGGTACCGCTTACCGGAATCCGCCCCCACTGGCTGACTAACCCTTCTTGGATCAAAACTGACAGCGAAACAGGGGAAATCCTTGAATGAATTACTGGCAAGAGTACGGCGAAACGCTTTGGGGGAATGGGTACACCGTTGTACCTATCTACGCCCCGGACGCCGATAAGAAGGGCGCGGGTAAACGCCCCATCGGTAAGGATTGGGAAAGAACAATTAACGATAAGGAGCAGATCCAGCGTTGGGCGGAACGCTACACGAAAAACGGCATCGGGATTCTGACCAAATACACCCCGGCGGTTGACATCGACGTTTACGATGAAGACGCCGTGGCGCATATGGCGGATTGGGTGCTGGAGAATGTTGGCCGCGCACCATGCCGTATCGGCCGGGAGCCAAAGAAACTCTTTCTGTTCCGGACGGAATCGCCATTCTCGAAAGTGAAGTCCGGCGTATGGGAAGACGACTTCGGCCAGCGCCATGCGGTTGAAATCCTCGCCGACGGCCAGCAGTTCGTCGCTTACGGTATCCACCCGGACACCAACCGCGATTATTACTGGCTCGACGACGAGAATCCGCTGAACAACGCAGCCGATTTCGACCTCGAAGAGATCAGTCTCGATACCGCGCGTGAAATCGCGGCGGAGTTTGACCGTTACGCCAAAGAGCAGGGCTGGACGATGGTCAAGCGCCCGATGAACGGGTACGAAGCGATCGGTACCGCTGACGAAGAGGATTGGGCGGCAACGGCGGGTATCCGGAAATGGGACGGAACGTACGAAGACCTGCGCGACCTCGTCATGAAGTATCCGAATCCGGAAGACTATGAGAACTACATCAAGGTTCTGGCCGCGCTGCAAATCTCCTGCCGGGATCAGGAAGAAGCGAAATCCATCGCACGCGAATGGGCCATGCAGGCACATAACTTCGACGACGGTGACTTCGAATATAAATGGGACAAAGGCTTCGCGCACAACGCATCACGCCTCGTAACGCTAGGCTCGATCATCACCGAAGTACGTGAAATCGAGAAAGCCGAGCAGGAAGAGAAGGCCATCGAGTACCGCGAGGCGTTTGCCGAGTGTACTGACGAGAAAGACTGGAACGCATGGGCCGAATCCTTCCGTAAAGAGCCGATTTTCGGCATGACCCGTAAGACGATCGTCCAAGTCGCGGCCGAAGCGTACCTGCGGATCAAGAATTATCGGATGACTGCGAACGATAAAAAGGAGCAATTAGGCTTCGATTATGGCTCAAAAGAAATGCCGATTTGGCTGAAAAAATTCGTTTTTTCGGAAGAAAATGACTGTTTGATCGATAAAACGTCCGGATCTTACATTTCTAAGGGCGCTTTCGACTTCGCGTACGCAAATATGTGCAAATTCGAGGAAGAAACGATTAAACCTGTCACTTTTGCCTCGCTGGTCAGGCCGATCCCTATCGTTTGTGACGCCATGTACTACCCGGCGATGCACGGTGATATGGAAGAGACGTTGTGGAAGCCGAAACCGGGTATCAACGGCCCGGAATTCTTTATCGACGAATCCGGTAAGACGTGGCTAAACTCTTTCGACCCGGATTCCATTCCGGAGCCTGCCGACGAGCTTTCGCCGTACGATAAAAAGGCCGTGGAGATCATCAAGGACTTTTTCGTCGTCCTTTTCCCGAATGACAAGGAACGCCGATACGTCATGGACTGGATGGCTTGGATTATTCAGCACCCGACGAAGCGTATCAACTACTCGTTACTGATTCGCGGCGCGCACGGTTCCGGTAAATCGACGTTAGGCGTGCTCATGTCGGCCATGCTCGGCCGCAAAAATGTGGGTTACGTGTCAAACACCGTGATGAACGGCCGTTTCAGCGATTGGGCGGAAGGCGACATCCTGAAAATCGTGGAAGAAGTGTACGACAAGGGCGACCGCTACAGCGCCATCGAGCGGCAGAAAGAGTACATCACCAACGACCGTTTTCAGGTGGAGCCGAAAGGGCGCAAGCCAAAGGTTGTCGTGAACACCAGCAGTAAAATGATGTTCACCAACCACTTTAACGCGTTGCCACTCGATGAAAACCAGCGTCGCTATCTGGTGGTGTCCACGCAGGCGGAAAATCATCTGGACATGGAGCGCGTATATGGGTCGAAGGCGGAACGCTCGCGGTTCTTCAAGAACGTGTACCGGGCGATCGATAACCACGTCCCAGCGTTGAAGAAATGGTTCCTTGATTGGGAAATCAGTCCGGAGTTTGACCACAAAGGCCACGCCCCGCAGGACACCGAGGCATTCGCCATTATGGCCGACGCTTCAAATGACGGAATTCAGGGAGTTATCGTACAGTTACTTCGGGATGGAGATG-CACGCGGTGTATCTAACGACGTGATTTTTACCCCCGACCTGAAAAACGCGTTACTGGAGTCCGAAGATATTGAATTTCCGAAGTCGAACCGACTGAAAAACATGCTCATGGAATTGGGGTACAAACCCGGCGGGCTGATTAAACTGGACGGTACCACTGGACGTGTTTACGTCAGGAAACGTGTAAAGGGGGCGTTTGACGAAAACGGAAAACTGAACGCAGATTGGGCGAGGAAAACGCTCAAAAAGCACAACGATAACGTGGCGAAAATC-TCGAAGAAACCGTCTGACCCTTTCGACGACGAAGACGAAGTTTGACACA-ACAAAAAGGCCGGGAAATCCGGCCTTACTTTT + |||||||||||| | |||| ||||| | | | ||||||||||||||||||||||| ||| || | || |||| ||| ||||||||||||||||||| || | ||| |||||||||||||||| |||||||| |||| ||| || |||||||| | |||||||| || ||||||||||| ||||| || |||||| || ||||| || ||||| || ||||||||||||||||||||||||||| ||||| || |||||| |||| | | | ||| ||||||| |||||| || ||| | || || | | || ||| | || ||||| ||| ||||| | ||||||||||| |||||||||||||||||| |||||||| ||||| || ||||| |||||| || | ||| ||| || | | || |||||||||||||| || ||||||| | ||||||||||| || ||||||| |||||| |||| |||||||||| ||| ||||||| ||||||||| || |||||||||||||||| ||| |||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| 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CCGCCGCCGCTTCCTTGGTTCATTATGTTATTCGGGTCATCTTTGGACAGGATCTGCTCGCCTTTCTGCGCGATGATTGGTACCTCATCCGATTT-AAGCCCGGGAAGACCGCCATCATGGAAGCGCGGCGCCCCGACAAACAAAGACGGGCTGACGGAGTTTTTCCGCTGCTGGCCACCCGACGTTTTGCTGCCGACCATGCCACCGTTGTGTTTAGCCGCTACGCCGCCCATGGATGTTGCTGCTGCACCGATGCCGCCGCCTATACCCGCCAGGGAGTTCAGTATCATCTGCTGCAGGATCGCCTGCGCAATCTTCATCAGGAAGTCCGCGAAGAACTTAGTAACTGTAGCGCCGAGACTGCGGAACGCATCGCCGAGGGACATCGTGCCGCTAAGGACTTGGACAAGGCTATC-CGTAACCGACTGTAGCC----CCGTCGCCAGCCCATCCAGAACGCCCTGCACCACCGTACTATCCATCTGGGTGAATGTGCCGGTGACGTCATTCAGCCCCGCGCGGATCTGCGCAATTTTGGCCATGA-GCGCCGCATAGTCTTCCGGCGACAACA---CATTGCGGAAT-TTCTGCGCCAGCTGGTCCAGGGTGTTCG-CCGACTGCAGCAGGTTCACGTTCATCGTCGCATACAGCTCGGACGTCTGCTTCACCGCCTCATCTTCGGAGATGATGCCCGCCTGACGTTTGGCGTTAATCTCATCCAGCAGGCTTTTCTTCGTTTCCTGGATCGCGTTAAGCTGGTCTTCCACGCGCTTGATTTCTTCCAGCTTCGCCTGCGTGGTGGTGTATTCGAGATTCCGCTTGCGCAGGTCTTCGAACTTGCCTGCCAGTTCTGCCCCGCCCGAACCGAGTTTTTTCGACTTGGCGATCAGCTGGTCGTACTGGGTATTAACGGCCTGCAGTTTGGCCTGCAGCCGGTCATCAAACGTGGCATTCGGGTCGACCTTAGACTGCTTAACGCCTACGGCATCATCCAGTTTTTCATACTGCGCGGTCAGCGCCTCTAGCGCGTTTTCCTCGCGCTTCGCGGCATTCTCCCGGGCCTT-GCTGC--CGTTTTCCATGGCGTTATAGGAATCCGTCTCCGCTTTCTTCCGCGCGGCCACAATCGCGTCGAGGCGCTTGATCATCGCCGCCCCTTCGTTACCACCGATGCCCTTCGCACGCTGATACTGCGGCGCGAATTCCTCGTCAATGAGTTTCAGCCGGCCGGGAAGGTTTTTACGCTGCAGTGCTTTCTGCGCGGCAACGCCGGCCTTCTTGGCCTGTTCTTCCATCTTGGCAAGGTCTTTCGTCATGCCTTTGATGTCGCGGTCGCGCTGGGTGACTCCGGTTTCCGGGTCAGCGGTGTACTGAAAT---TGAGGATTCGTGATCGCCTTAATATCGGCCATCAGC--GTCGCCACCTGACCACGGATAACATC---CACTGCGGTCTTGTTGGTGTCGACCATGTTTTTGTTTAACTCGGCCCATTTTTTATCGACATCATCCCAGACCCTACCCGTGGACTCCAGGAAGTCGCGGTGTTCTTTCGTCAGGTCTTCGGCCA-GGCCATCCGCCCAGTTCGCCAGCGTTTCGCCGACACCGGGGATCAGGCGCAACACGTCGGCAATCCAGCCCATGATCATCTTCGTGGCCGTGGCGAATTGCGTCGTGACCGGGCGCACCC---AGCCGATCAGGATGTCGTACAGCATCGTCGGGATTGAATCCCCGACCGCCAGTAGCTGATTGCCCAGGTTTTTGTAATCCCGGATGACCTCGTCAACGCCCTGCCGGAAGGTTGACGACTGGTCGTACATGATTGAGCCGATGTCGTATGCGATAAGCGCTGCGCCGACAAATGGGATGATGCGCAGCAGCCCGCGTAATGCGACGCCAAGAAGCCCGACCGCACCTTCTGCGGT-AGCAAGACCTGTCGCCCATGACATAAGGC-CCGT-ATAAACC--GCCCGGATAAGCGTCACGCCCCCTTT-CAGCACAGGCAACATCGAACGGATGGACCCGACTA-GCCCCAGAACCATCCGCGTGATTTTAAGGCCGGCCAGAACGCCGAGCACCGTGATAACCGTGTCCAGGTTGTCAAT-CAG-ATATCCGAGAGTGTCCGCCACGTAGCTGAATGCCGCACCCAGTTTTACCGCGGCCTCCTTCCCATCCGAGCTGTTAAGGAAGTCCGTGACCTTCTGCAGCAGCTGAACGTATGCGTCGATATAACCAGAGTCCGCTAACGCCAGCTGGAACGCATTCATCGCGTTACGTGCGCGGGCTTCCATCGCGTCTACGCCTTTGCTTGCGGTTTCCAGCTGGGCATCAATAGCCTTAGCCTGTTCACGGGCGAAGTTGATAACCGCTTCACCTGAAACCTCGCCGTTTTCCATCGCCTTCATCAGCTGCGCCGTGGTCATGTTCATGCCTTTCGCGAACAGCGCCACCGCCCCGGGTAAACGTTCGCCCAGCTGGCCGCGCAGTTCTTCGGCGTACACCTGCCCTTTCGACAGCATCTGTTCCAGTGCGCGGAAAATACCGTTCATATCATCCGCGGAGAGGTGGAAAACGCGACCGGCTTTCGCCACGCTTTCGAATATGAATTTTGAGTCCTGCAACGACAGACCGACGGCTTTCGCCGCTACCGCGAACCGGGTATACGAGTTCGATACTACACCGATATCAATACCCAGCTTGTCGGACAGCCCGAGCATATATCGCCATTCGTCGTTAAGGGCCGCCTGGCTTTCCCCAACAACGGTGGAGATCTTAACTAACGCCTGCTGGCGCATCTTATACGCCCCCACCGCACCGGACGCCTGGTTAAGAGCACCCTGCACACCGACGTATGCCGTAGCGAGGCCCAGGACTTCACCGCGAATACGTTGCAGCATTGATAACGTGGTTCGTCCCTCATCCCGGAAAAGGGAGAAGGCTTTTGCACCGTCTCGCGTGGCGCCCGCGTTATTCCGCAAGGCTTGC----GTCAGGGAGTTTATCGAACTGGTGGTCTGACGGCTTGTGGAGATCAGC---GCTTGCTCTGCGCTATTCAAATTACGGGTATCGATGCCCGCCGACCGCAAAGCCGATTGTGTCGTACGCGCAGCAGTCCCTGTGTCCCTCAATGACCG-GGCGGCCGCCGCAAGTCTCTGCTGTGCCGCCTGCATCCGGTTTGACAATTCGCCGGTATCGGTAGTGGCGGTTCGCATCTGCTGCGCTAAACCTTG-TACCGCCTCCATTGC---TGTGCGGTACTCCGTTCGTGCGGCCCGGACTGCTGCCACCTGCTGACGGTACATATCGATCTGCTGCGCCATGGCCGAAACGCTTTTATTCGCTTCGTTAAGCTGGCGGA---TCTTACCGGTGATATCTGTAACCTTTTTGCCGCTATT---TGCTATCTCCGTCGCAA----GTGTCGACACCTGCTGCTGCAGGCCAGACAGCGTCCGGCGCGCCGCCTCCGCCGGGCTTACGATTTGCTGGATTTGCGACACCAGCGGCCCCATCTGCGACGTCGCCTG + CCGCCGCCGCGCGACTGGTTAAGCACGTTGTCCGGGTCATTCTTGGACAGCACCTGTTCGCCTTTTTGCAGAATGGTCGGAACCTCGTCAGAACGCAAGCCCGGCA-GACCGCCGTCGTGGAAGCGCGGGGCATTAGCGAACATGGCCGGGCTGATACTGCCCTTCATCTGCGTGCCGCCCGTTGTCTTGCTGCCTACGGTTCCGCCATTGTGTTTCGCCACCACGCCGCCGAGGGCCACCGCCGCAGAACCGATACCACCGCCCATCCCGGCGATTGCGTTGAGCGCCATCTGCTGCAAGATTGCCATTGCGATCTTCTGCAAGAAGTCCGCGAAGAACCGCGCCACGGTAACGCCGAGATTCGAGAAGGCATCACCAATGCTTTGCGACCCGGCCACGAC-----CAACGCCATTTCGTCAACGATGGAAGACAGCGCCGTGCTCATACCGTCCAGCACGCCCTGAACGACAGTCGTGTCCATCGTCGTGAAGGTGCCAGTGACATCCACCAGCCCGGCCTTGACGGACGCAATCTGCGCCATGATGCGGCTGA-ATTCTTCCGGCGACATCGTGTCTTT----AATCTTCTGCGCGAAGGCGTCAAGC-TGCTCGGCCGACGACGCGATGCCCGCATTCATGTTCTGGTACAGCGCCACCGTCTGCGAGACTGCTTCGTCTTCCGAGATAATCCCGGCCTGACGCTTGGCGTTGATTTCGTCCAGTAGGTTTTTGCGCGTCTCCTGCTGCGCGTTTAACTGATCCTGAATGCGTTTCAGTTCTTCGAGTTTGGCCTGCGTGGTCGCATATTCCAGATTGCGCTTGCGCAGGTCTTCGAACTGCCCGGCCAGATTTTCCCCGCCAGCGCCGAGTTTCTTCGACTTGGCGATCAGCTGATCGTACTGCGTATTGACGGCGGCCAGTTTGGCGGCCAGACGGTCGTCAAACGTGGCATTCGGGTCAATCTTAACTTCCTTCACGCCGACGGCCGCATTCAACTCGTTGTACTTGTTGATCAGCGCCTGTAATGCGTTTTCCT---GTTTCTTG--ATGCCACCCGTCGTACGCTGCTGCGAATTGAACAGCGT----------CGTTTCTGCCTTCTTGCGCGCCGCTACAACGGCGTCGAGACGTTTGGTAAGGGCTTCCCCCTCCGAGCCGCCGATCGACTTAGCGCGGGCGTACTGCGGCGCGAATTCTTCGTCAATAATGGCTAGTCGGCCGGACAGGTTCTTCCGCTGTTCCGCTTTACGCGACGCAACGTCCGCCTTCTTGGCCGCCTCTTCCATCTTGTTCAGTTCTTTCGTCAGGCCCGCAATTTCACGGCTGCGCTTCGTGACGCCTGTTCCCGGGTCTTGGGTAAACTGGAAGCCCTCGCCCTTCGTGATAGCGGCCATGTCGGCGGCCAGTTGGTTG--ACCTGCCCGCGAATCTTGTCAGTCGCATCGGCGTTCTTCG---CGACCATTTCGTCGTTCAGTTTCACCCACTGCTTATTGACGTCACCCCAAATACGGCCAGTCGATTCGAGGAAGCCACGCTGCTCTTTCGTCAGGTCATCCCCGATGGACATG-GCCCAATCTGACAGCCCTTGACCAACTCCCGGGATCAGTTTCAGGACATCCGCAATCCACTTGATGATCGCCCGGGTGGTGTCGGCGAACATCGTGGTAACAGGTCGAACGATAGACACGGCCAGA---TCGTACAGCAGCGCCGGGATGGACTCGACGACGGCCACCAGTTGATTGCCGAGGTTCTTGAAGTCCCGGATAATCGCGTTGACTGCCTCGCGGAAGGTCTGCGACTGGTCGTACATGATGGCACCGATGTCATAGGCCAGCAGCGCCCACCCGACAATCGGGATTAACCGGGTCAGACCTTTCAGCGCCACGCCGAGAAGACCGATAGCCCCCTGCGCCGTGATCATT--CTGGCCGCTACACCTTCCAGCACCGTGATGATGCCAGCGCCGATTTTCGACA-GCGTACTGAACAGCGGCAGCAAGTTTTTAAGGCCGGA---GATCATGCCGCCGATGAA-CTGCACCACTTTCAGCCCGGCCAGTACGCTTAACGCGGTGATCAGCGTGTCCACGTTCTCGATGCACCACGTC--ACTGCGTCGGCCAACATGCTAAACGCCTCGCCGAGTTTAACGGCGGCCGCCCGGCCATCCTCGCTGTTCAGGAAGTCGGTGATCTTGTTAAGCATCTGCACGTACGCTTCGATAAAGCCTGCGTCGGCCAATGCCAGTTGAAACGCGTTCATGGCGTTACGGGCGCGCGCTTCCATCGCATCGACACCTTTCTGCGCCGTAGCGAGTTGCGCGTCGATTGCTTTGGCCTGCTCGCGGGCGAAGTTGATAACCGCCTCGCCAGTGATTTCCCCGTTTTCCATCGCCTTCATCAGTTCGGCGGTGGTCATGTCCATGCCTTTTGCGAACAGCGCGAAAGCCGCCGGGAGACGTTCACCCAATTGGCCGCGCAATTCTTCCGCATACACCTGACCCTTCGACAGCATCTGTTCCAGCGCGCGGAATACGCCTTCCATGTCATCTTGTGACAGGTGGAATACACGGCCCGCTTTCGCTACGCTTTCGAAGATGAACTTTGAGTCCTGCAATGACAGGCCGACCGCTTTCGCGGATACGGCGAATTTCGTGTACGACTGTGACAGGGTGGTGATGTCGATCCCGAGCGTATTCGCCAGACCGACCATGTATTCCCACTCTTTGTTGATGGCCGCTTGGCTGTTACCCACCACGTTCGCAATCTTGACCATCGCCTGCTGACGGTTCTTGTACGCGTCGATCGCGCCGCCCGCCAGATTGATAGCCCCCTGAAAACCGACATACGTGGTCGTCAGCGCCAGCACTTCCCCGCGAATACGTTGCAGGAAGGACAGCGTGGTACGGCCCTCGTCGCGGAATAGTGACCACGCCTTCGCCCCG--TCGCGCGCCGCTTG-GCTGTTACGGTTGG-TCGCGGTTGACAGCGTATTAAGCGCTGCGGCCGATTGTTGGCTGGTGGAGATCAGCCGGGCTTCCGCATCG---GACAGGTTACGCGTGTCCACCTGAGCAGCACGTAATGCGGCTTGGGTAGACCGGGCGGCCGTAGCCGTGTTTCGC-ATGGCCGTCGCGGCTGCGGATAGCCGTTGTTGGGCGGCCTGCATCTGAATACCTAAAGCACCCGTATCAGTTGTCGCGGTGCGCATCTGCTGTGCTAA--CTTGATGACGTCT-TGTCGCGCTTGT-TGGTATTCAGTGCGGGCGTTCCGAAGGGTTGCCACCTGCTGACGGTACAGGTCGATTTGCTGCGCCAGCGCCGAGACGGTTTTATTCGCCTCGTTGAGCATTCTTACTTTCTGAGCGACGTTCTCCACTTCCTT------GCTATTGCGAGCCAGTTCTGCGGTAACGCCGTGT----ACCTGATTCTCAAGGCCGGACAGCGTGCGGCGCGCCGCTTCTGCCGGGCTGACGATGGTCTGGATCTGCGTGCCAAGCGGCCCGAGTTGCCCGGTTGCCTG + |||||||||| ||||| | | ||| | |||||||| |||||||| | ||| |||||||| ||| ||| | || ||||| || || |||||||| | ||||||| || ||||||||||| || | |||| | |||||||| | ||| |||| ||| |||| || |||||||| || | || || |||||||| ||| | |||||||| | || || || | |||||| || ||||| || || || | | ||| || ||||||||||| ||| ||| || |||||| || |||||||||||||||| | || ||| |||||||| | ||| ||||| || | | || ||| | ||| ||| || || ||| | ||| | || | |||| || || ||||| |||||||| || || || | |||||| ||||| ||||| ||||| || |||||| || || |||||| | ||||||| ||| | | | ||||||||||||| | | || ||| |||||||| | ||| || || ||| ||||| | | | | | ||||| || |||||| | ||||||| || || || ||||| ||||| || || |||||||| |||||||| || || ||||| ||| |||| ||| ||||| |||||| | ||| || | | ||| || | |||||| || || ||||||||||| | ||||| ||||| |||||||||||||||||||||| || ||||| | | ||||||| | |||||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||||||| ||| ||||| |||||||||||||||||||| | |||| | ||| ||||| ||||| ||| || | | |||| | ||||||||| || |||||||||| | ||| | || | || | | | ||||| || || | |||| ||| || || ||||| ||||| || |||| |||||||| || ||| | | || |||| || || ||||| ||| || || ||||||||||||||||| |||||||| | || ||||||| ||||| || ||||| ||||| ||| |||||| | |||||||||||| |||||||||||| || |||||||||| ||| || || ||| ||||| ||||| || ||| ||||||| ||| |||| || | |||||||| || || ||||| ||| || | ||||| || || || || | | ||| || || | ||||||| | | ||| | | |||| | |||| ||| ||| |||| | | || || || || |||||| | || || |||||||||||||| || | | || ||| ||||| | | |||| || || || || |||||||| || || || |||||||| |||||| | |||| |||||| ||| || || || || || | || ||| |||||||||| || |||||| || || |||| |||| || |||||||| ||||| ||| | |||||||| | | ||| || ||| |||||||| |||||||||||||||||| | |||||||| || || | ||||| ||||||| ||||| | || ||| || | || ||||| ||||| |||| || || | || || | || ||| | | | | | || |||| || | | || | ||| || || || || |||| |||| | | || ||| || | ||| | || | | || | ||| || |||||||| |||| | | | ||||| | |||||||| ||| || || || | || | | ||| |||| ||| || ||| | || ||||| || |||||| || |||||| |||||| |||||||| |||| ||| | |||| ||| ||||| || |||||| | || | ||| || || ||||| || ||||| ||||| |||||||| ||||| ||||||||||| || || ||||| || || | || || || || || || || ||||| || |||||||||||||||||||| || || | | || ||||||||||||||||||||||| | || |||||||||| ||||||||| ||||||||||| | ||| | || | |||||| |||| |||||||||| |||||| || |||||||| || |||||||||||||||||||| |||||||| | || | ||| ||||| || |||||||| || || || |||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||| | ||| ||||| || ||||| | || | ||| || || || ||| | | | ||| |||| ||| ||| ||| || | ||| | |||||| ||||| | || || ||| | | ||||| || | ||||||||| || |||| ||||| | | ||| ||| |||| | || | ||| ||||| | |||||| || | || | || |||| ||||| ||||||||||||||||| | || | |||||| || ||||| || ||||| || || | || || || ||| ||||| | ||| | | | || || || | || | ||| | || | || || | || |||| |||||||||||| |||| | | || || ||||| || || | || | || || || | ||| || | || || || || | |||| | | ||| ||| ||||| || | || | || || || ||||||||| | | || | || ||||| || || ||||| ||||||||||| ||||| |||| | || || | || ||| |||| || || || ||| ||| | | |||||||||||||||||||| ||||| |||||||||| ||||| ||| |||||||||| ||||| ||| | | ||| | || | | || |||| |||||| || | || | | || |||| ||||| | || ||||| |||||||| ||||||||||| || |||||||| ||||| |||||| |||| | |||||||| | ||| || ||||| + + + 4 + 545.904 + 604 + 2.73123e-149 + 7159 + 8129 + 52248 + 51278 + 1 + -1 + 719 + 719 + 24 + 983 + ATGAAAGTTAAAGGTTTTGAGAAAGTCATCATACTGCATCTCGGCGCGCTCTTTGGCGCCGCAAACGCTGG---CGAGAAGTCTGTAAAGAGTTTCCACCGCACGCTGCTGAACACGCCGAACATGGACGAAATGAGCGTCCATGAATTCGCCGCCGGC-CGTGTGAGCGACCGACTGGCGAAGCACGAAGTGAAAGACCCGATCG--GC----TATAAGACGATTGGCTTTGCGCCTTACGCGGACTACGTGGGCGGCAAGTTCGCCATGGGCATCCCGGGTACTAACGCCATCGTGCTGCAGGCCGAAAAGCGTGAACGCGTGCTGCCCGGGGTCAGCGTGCGCAACGAAGTGACGAAGCGCATGGACGCCTGGCGCGAGAAAGAGATCGAAGGCTGGGAGCCGACCCGGAAAGACTGGGCGCAGCTGAAAGACGATGTCGAAGCCGAAATGCTGAAAACCGCGCCTATCCGCCCGACCCGCTACAATGTGATCATCGCCGTCCCGTACGTCTACGTGTTCACCACCAGCGCCAAGACCGCCGAAGAGGTTAACGCCCTGCTGCGTGCCGCGTTCGGTACCTGGCCAGTGGAACACCTGCTGATCAATGACTTCGTGCTGCGTCAGTCAATGGAGAAGGTCGTACGCGG-CAGCATCGAGGGTATCACTGGCGACGACTTCATCCACATCAAGCACGATGACGGCGATGACGTGAAGTTCAAGGACATTGACATCCATAAGGACGAAGTGGTCCTCGACTACCTGGCGCGGCATTACACGGTTCGGGCGCTGAACATGCGAA-TCGACGAACGCGAGATGCGACCTGGCGTGGGCAACGTGTTCTTCCGCCTGACCGACAAGGCGATCATCTCCGGGATCCACATCGGCGAGGCGGACGTTGACGCCAACTATGAAGCCACCCTGGAGCGCTACAACAATGACAGCGGTACGTTCCTGACCTACATGGCCAACCTGTTCCA + ATGAAAATCAAGAGTTATGAGAAAGCCATTATCTTGCACCTCGGCGCGCTGTATGACGCGGCCAACGACGGTAACGAGAAG---GTCAAGCCGCTGCACCGCCTGATCCTGAACCTGCCGAACGTTGACGAAGAGGCCGTAACGGCTTTCGCGAAAGGAGCGTTT-AGCGATGCACTCGAAAAGCATGAAGTGTCAGATCCGCCGGAGGCGTCTTACAAGACAATGGGCTTTGCAGCGTACGGCGAAGAGGTTGACAGCAAGTTTGCGCTCGCCATCCCCGGAACAAACGCCATCGTCTTCCAGATCGAAAAGCGCGAGCGAGTGCTGCCCGGCGTTAGCGTACGAAACGAAGTCGTGAAGCGCATGGCCGCGTTGCGCGAGAAAGAGATCGAGGGTTGGGAGCCGAACCGCAAGGATTGGGCGCAGATGAAGGACGACGTGGAAGCGGAAATGCTGAAACACGCGCCTATCCGCCCGTCCCGCGTCAACGTCATCCTGTCCGCCCCGTTCGTGTACGTGTTCACGTCGAGCGCGAAGACGGCAGAAGAGTGCAGCGCGCTGATCCGTACCGCGCTCGGCACATGGCCCGTTGAACACCTCCTGCCGAGCGAGTATGAGCTGCGCCAGTTAATGCAGCGCGCGGTTCTCGGCCAGCA-GGACGGCATCAAGGGCGATGCATTTATCCACCTGAAACACGATGACGGCGACGACGTCAAGATGAAGGACACGGACATCTTCAAAGACGAGGCGGTGGTTGACCTGCTGTCCCGCCACTGGACTGTCCGCGCACTGGATCT-CGAAGTCGA--TACGC--AATGC--CCGGGCATCGACACCGTGTACTTCCGCCTGTCCGACAAAGCCATCCTGTCCGGTATCCACATCGGCGAGGCCGACGTTGATGCGAACTACGACGCCACGCTCGAACGCTACGGCACCGACGGCGGCCAGTTCCTGACCATGATGGCGAACCTGTTCCA + |||||| | || ||| |||||||| ||| || |||| ||||||||||| | || ||| || |||| || ||||||| || ||| | |||||| | | |||||| ||||||| | |||||| | ||| | ||||| || ||| | ||||| ||| | ||||| |||||| ||| ||| | || || ||||| || |||||||| | |||| || | || | | ||||||| || | | |||||| || || ||||||||||| | ||| ||||||||| || || ||||||||||| || ||||| || |||||||| ||||||||||| ||| | |||||||||||||||||| || |||||||||| ||| || || ||||||||| |||| ||||| || ||||| |||||||||||| |||||||||||||||| ||||| ||| || ||| | ||| ||||| ||| ||||||||||| | ||||| ||||| || |||||| | ||| ||| | ||| ||||| |||| || ||||| || |||||||| ||| | || | | |||||| |||| |||| || | || | ||| ||||| || || |||| ||||| | || |||||| | || |||||||||||||| ||||| ||| | ||||||| |||||| || ||||| | ||| | ||| ||| | || || | || || || || ||| | | |||| |||| |||| |||| || ||| | | || ||||| |||||||||| ||||||| || ||| | ||||| ||||||||||||||||| |||||||| || ||||| || ||||| || || |||||| || ||| |||| |||||||||| ||||| ||||||||||| + + + + + + + 31902778 + 102365819095 + 43 + 5.88492035908107e+15 + 0.41 + 0.625 + 0.78 + + + + + + diff -r e7a6f7a7148d -r ab0d6782a95f test-data/blastxml/merlin.gff --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blastxml/merlin.gff Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,1230 @@ +##gff-version 3 +##sequence-region Merlin 1 172788 +Merlin GeneMark.hmm gene 2 691 -856.563659 + . ID=Merlin_1;seqid=Merlin +Merlin GeneMark.hmm mRNA 2 691 . + . ID=Merlin_1_mRNA;Parent=Merlin_1;seqid=Merlin;color=#00ff00 +Merlin GeneMark.hmm exon 2 691 . + . ID=Merlin_1_exon;Parent=Merlin_1_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 2 691 . + 0 ID=Merlin_1_CDS;Parent=Merlin_1_exon;seqid=Merlin +Merlin GeneMark.hmm gene 752 1039 -339.046618 + . ID=Merlin_2;seqid=Merlin +Merlin GeneMark.hmm mRNA 752 1039 . + . ID=Merlin_2_mRNA;Parent=Merlin_2;seqid=Merlin +Merlin GeneMark.hmm exon 752 1039 . + . ID=Merlin_2_exon;Parent=Merlin_2_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 752 1039 . + 0 ID=Merlin_2_CDS;Parent=Merlin_2_exon;seqid=Merlin +Merlin GeneMark.hmm gene 1067 2011 -1229.683915 - . ID=Merlin_3;seqid=Merlin +Merlin GeneMark.hmm mRNA 1067 2011 . - . ID=Merlin_3_mRNA;Parent=Merlin_3;seqid=Merlin +Merlin GeneMark.hmm exon 1067 2011 . - . ID=Merlin_3_exon;Parent=Merlin_3_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 1067 2011 . - 0 ID=Merlin_3_CDS;Parent=Merlin_3_exon;seqid=Merlin +Merlin GeneMark.hmm gene 2011 3066 -1335.034872 - . ID=Merlin_4;seqid=Merlin +Merlin GeneMark.hmm mRNA 2011 3066 . - . ID=Merlin_4_mRNA;Parent=Merlin_4;seqid=Merlin +Merlin GeneMark.hmm exon 2011 3066 . - . ID=Merlin_4_exon;Parent=Merlin_4_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 2011 3066 . - 0 ID=Merlin_4_CDS;Parent=Merlin_4_exon;seqid=Merlin +Merlin GeneMark.hmm gene 3066 4796 -2177.374893 - . ID=Merlin_5;seqid=Merlin +Merlin GeneMark.hmm mRNA 3066 4796 . - . ID=Merlin_5_mRNA;Parent=Merlin_5;seqid=Merlin +Merlin GeneMark.hmm exon 3066 4796 . - . ID=Merlin_5_exon;Parent=Merlin_5_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 3066 4796 . - 0 ID=Merlin_5_CDS;Parent=Merlin_5_exon;seqid=Merlin +Merlin GeneMark.hmm gene 4793 5317 -682.565030 - . ID=Merlin_6;seqid=Merlin +Merlin GeneMark.hmm mRNA 4793 5317 . - . ID=Merlin_6_mRNA;Parent=Merlin_6;seqid=Merlin +Merlin GeneMark.hmm exon 4793 5317 . - . ID=Merlin_6_exon;Parent=Merlin_6_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 4793 5317 . - 0 ID=Merlin_6_CDS;Parent=Merlin_6_exon;seqid=Merlin +Merlin GeneMark.hmm gene 5289 6431 -1457.525863 - . ID=Merlin_7;seqid=Merlin +Merlin GeneMark.hmm mRNA 5289 6431 . - . ID=Merlin_7_mRNA;Parent=Merlin_7;seqid=Merlin +Merlin GeneMark.hmm exon 5289 6431 . - . ID=Merlin_7_exon;Parent=Merlin_7_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 5289 6431 . - 0 ID=Merlin_7_CDS;Parent=Merlin_7_exon;seqid=Merlin +Merlin GeneMark.hmm gene 6428 7180 -968.015933 - . ID=Merlin_8;seqid=Merlin +Merlin GeneMark.hmm mRNA 6428 7180 . - . ID=Merlin_8_mRNA;Parent=Merlin_8;seqid=Merlin +Merlin GeneMark.hmm exon 6428 7180 . - . ID=Merlin_8_exon;Parent=Merlin_8_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 6428 7180 . - 0 ID=Merlin_8_CDS;Parent=Merlin_8_exon;seqid=Merlin +Merlin GeneMark.hmm gene 7228 7857 -809.330137 + . ID=Merlin_9;seqid=Merlin +Merlin GeneMark.hmm mRNA 7228 7857 . + . ID=Merlin_9_mRNA;Parent=Merlin_9;seqid=Merlin +Merlin GeneMark.hmm exon 7228 7857 . + . ID=Merlin_9_exon;Parent=Merlin_9_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 7228 7857 . + 0 ID=Merlin_9_CDS;Parent=Merlin_9_exon;seqid=Merlin +Merlin GeneMark.hmm gene 7857 8252 -515.006678 + . ID=Merlin_10;seqid=Merlin +Merlin GeneMark.hmm mRNA 7857 8252 . + . ID=Merlin_10_mRNA;Parent=Merlin_10;seqid=Merlin +Merlin GeneMark.hmm exon 7857 8252 . + . ID=Merlin_10_exon;Parent=Merlin_10_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 7857 8252 . + 0 ID=Merlin_10_CDS;Parent=Merlin_10_exon;seqid=Merlin +Merlin GeneMark.hmm gene 8340 8753 -522.529341 + . ID=Merlin_11;seqid=Merlin +Merlin GeneMark.hmm mRNA 8340 8753 . + . ID=Merlin_11_mRNA;Parent=Merlin_11;seqid=Merlin +Merlin GeneMark.hmm exon 8340 8753 . + . ID=Merlin_11_exon;Parent=Merlin_11_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 8340 8753 . + 0 ID=Merlin_11_CDS;Parent=Merlin_11_exon;seqid=Merlin +Merlin GeneMark.hmm gene 8787 8951 -212.019038 + . ID=Merlin_12;seqid=Merlin +Merlin GeneMark.hmm mRNA 8787 8951 . + . ID=Merlin_12_mRNA;Parent=Merlin_12;seqid=Merlin +Merlin GeneMark.hmm exon 8787 8951 . + . ID=Merlin_12_exon;Parent=Merlin_12_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 8787 8951 . + 0 ID=Merlin_12_CDS;Parent=Merlin_12_exon;seqid=Merlin +Merlin GeneMark.hmm gene 9014 9241 -274.669850 - . ID=Merlin_13;seqid=Merlin +Merlin GeneMark.hmm mRNA 9014 9241 . - . ID=Merlin_13_mRNA;Parent=Merlin_13;seqid=Merlin +Merlin GeneMark.hmm exon 9014 9241 . - . ID=Merlin_13_exon;Parent=Merlin_13_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 9014 9241 . - 0 ID=Merlin_13_CDS;Parent=Merlin_13_exon;seqid=Merlin +Merlin GeneMark.hmm gene 9248 10747 -1911.373457 - . ID=Merlin_14;seqid=Merlin +Merlin GeneMark.hmm mRNA 9248 10747 . - . ID=Merlin_14_mRNA;Parent=Merlin_14;seqid=Merlin +Merlin GeneMark.hmm exon 9248 10747 . - . ID=Merlin_14_exon;Parent=Merlin_14_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 9248 10747 . - 0 ID=Merlin_14_CDS;Parent=Merlin_14_exon;seqid=Merlin +Merlin GeneMark.hmm gene 10800 11435 -778.108633 + . ID=Merlin_15;seqid=Merlin +Merlin GeneMark.hmm mRNA 10800 11435 . + . ID=Merlin_15_mRNA;Parent=Merlin_15;seqid=Merlin +Merlin GeneMark.hmm exon 10800 11435 . + . ID=Merlin_15_exon;Parent=Merlin_15_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 10800 11435 . + 0 ID=Merlin_15_CDS;Parent=Merlin_15_exon;seqid=Merlin +Merlin GeneMark.hmm gene 11469 12290 -1045.093825 + . ID=Merlin_16;seqid=Merlin +Merlin GeneMark.hmm mRNA 11469 12290 . + . ID=Merlin_16_mRNA;Parent=Merlin_16;seqid=Merlin +Merlin GeneMark.hmm exon 11469 12290 . + . ID=Merlin_16_exon;Parent=Merlin_16_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 11469 12290 . + 0 ID=Merlin_16_CDS;Parent=Merlin_16_exon;seqid=Merlin +Merlin GeneMark.hmm gene 12365 12601 -286.579590 + . ID=Merlin_17;seqid=Merlin +Merlin GeneMark.hmm mRNA 12365 12601 . + . ID=Merlin_17_mRNA;Parent=Merlin_17;seqid=Merlin +Merlin GeneMark.hmm exon 12365 12601 . + . ID=Merlin_17_exon;Parent=Merlin_17_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 12365 12601 . + 0 ID=Merlin_17_CDS;Parent=Merlin_17_exon;seqid=Merlin +Merlin GeneMark.hmm gene 12598 12951 -440.013978 + . ID=Merlin_18;seqid=Merlin +Merlin GeneMark.hmm mRNA 12598 12951 . + . ID=Merlin_18_mRNA;Parent=Merlin_18;seqid=Merlin +Merlin GeneMark.hmm exon 12598 12951 . + . ID=Merlin_18_exon;Parent=Merlin_18_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 12598 12951 . + 0 ID=Merlin_18_CDS;Parent=Merlin_18_exon;seqid=Merlin +Merlin GeneMark.hmm gene 13067 13330 -321.884922 + . ID=Merlin_19;seqid=Merlin +Merlin GeneMark.hmm mRNA 13067 13330 . + . ID=Merlin_19_mRNA;Parent=Merlin_19;seqid=Merlin +Merlin GeneMark.hmm exon 13067 13330 . + . ID=Merlin_19_exon;Parent=Merlin_19_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 13067 13330 . + 0 ID=Merlin_19_CDS;Parent=Merlin_19_exon;seqid=Merlin +Merlin GeneMark.hmm gene 13340 14341 -1253.644245 + . ID=Merlin_20;seqid=Merlin +Merlin GeneMark.hmm mRNA 13340 14341 . + . ID=Merlin_20_mRNA;Parent=Merlin_20;seqid=Merlin +Merlin GeneMark.hmm exon 13340 14341 . + . ID=Merlin_20_exon;Parent=Merlin_20_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 13340 14341 . + 0 ID=Merlin_20_CDS;Parent=Merlin_20_exon;seqid=Merlin +Merlin GeneMark.hmm gene 14320 14883 -740.935174 + . ID=Merlin_21;seqid=Merlin +Merlin GeneMark.hmm mRNA 14320 14883 . + . ID=Merlin_21_mRNA;Parent=Merlin_21;seqid=Merlin +Merlin GeneMark.hmm exon 14320 14883 . + . ID=Merlin_21_exon;Parent=Merlin_21_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 14320 14883 . + 0 ID=Merlin_21_CDS;Parent=Merlin_21_exon;seqid=Merlin +Merlin GeneMark.hmm gene 14911 16197 -1617.100759 - . ID=Merlin_22;seqid=Merlin +Merlin GeneMark.hmm mRNA 14911 16197 . - . ID=Merlin_22_mRNA;Parent=Merlin_22;seqid=Merlin +Merlin GeneMark.hmm exon 14911 16197 . - . ID=Merlin_22_exon;Parent=Merlin_22_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 14911 16197 . - 0 ID=Merlin_22_CDS;Parent=Merlin_22_exon;seqid=Merlin +Merlin GeneMark.hmm gene 16289 17836 -1947.052483 - . ID=Merlin_23;seqid=Merlin +Merlin GeneMark.hmm mRNA 16289 17836 . - . ID=Merlin_23_mRNA;Parent=Merlin_23;seqid=Merlin +Merlin GeneMark.hmm exon 16289 17836 . - . ID=Merlin_23_exon;Parent=Merlin_23_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 16289 17836 . - 0 ID=Merlin_23_CDS;Parent=Merlin_23_exon;seqid=Merlin +Merlin GeneMark.hmm gene 17858 18673 -991.849469 - . ID=Merlin_24;seqid=Merlin +Merlin GeneMark.hmm mRNA 17858 18673 . - . ID=Merlin_24_mRNA;Parent=Merlin_24;seqid=Merlin +Merlin GeneMark.hmm exon 17858 18673 . - . ID=Merlin_24_exon;Parent=Merlin_24_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 17858 18673 . - 0 ID=Merlin_24_CDS;Parent=Merlin_24_exon;seqid=Merlin +Merlin GeneMark.hmm gene 18707 19351 -821.724123 - . ID=Merlin_25;seqid=Merlin +Merlin GeneMark.hmm mRNA 18707 19351 . - . ID=Merlin_25_mRNA;Parent=Merlin_25;seqid=Merlin +Merlin GeneMark.hmm exon 18707 19351 . - . ID=Merlin_25_exon;Parent=Merlin_25_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 18707 19351 . - 0 ID=Merlin_25_CDS;Parent=Merlin_25_exon;seqid=Merlin +Merlin GeneMark.hmm gene 19351 19776 -538.184958 - . ID=Merlin_26;seqid=Merlin +Merlin GeneMark.hmm mRNA 19351 19776 . - . ID=Merlin_26_mRNA;Parent=Merlin_26;seqid=Merlin +Merlin GeneMark.hmm exon 19351 19776 . - . ID=Merlin_26_exon;Parent=Merlin_26_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 19351 19776 . - 0 ID=Merlin_26_CDS;Parent=Merlin_26_exon;seqid=Merlin +Merlin GeneMark.hmm gene 19776 19988 -255.987740 - . ID=Merlin_27;seqid=Merlin +Merlin GeneMark.hmm mRNA 19776 19988 . - . ID=Merlin_27_mRNA;Parent=Merlin_27;seqid=Merlin +Merlin GeneMark.hmm exon 19776 19988 . - . ID=Merlin_27_exon;Parent=Merlin_27_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 19776 19988 . - 0 ID=Merlin_27_CDS;Parent=Merlin_27_exon;seqid=Merlin +Merlin GeneMark.hmm gene 19988 21550 -1974.103338 - . ID=Merlin_28;seqid=Merlin +Merlin GeneMark.hmm mRNA 19988 21550 . - . ID=Merlin_28_mRNA;Parent=Merlin_28;seqid=Merlin +Merlin GeneMark.hmm exon 19988 21550 . - . ID=Merlin_28_exon;Parent=Merlin_28_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 19988 21550 . - 0 ID=Merlin_28_CDS;Parent=Merlin_28_exon;seqid=Merlin +Merlin GeneMark.hmm gene 21625 22116 -616.669463 - . ID=Merlin_29;seqid=Merlin +Merlin GeneMark.hmm mRNA 21625 22116 . - . ID=Merlin_29_mRNA;Parent=Merlin_29;seqid=Merlin +Merlin GeneMark.hmm exon 21625 22116 . - . ID=Merlin_29_exon;Parent=Merlin_29_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 21625 22116 . - 0 ID=Merlin_29_CDS;Parent=Merlin_29_exon;seqid=Merlin +Merlin GeneMark.hmm gene 22240 24216 -2488.948058 - . ID=Merlin_30;seqid=Merlin +Merlin GeneMark.hmm mRNA 22240 24216 . - . ID=Merlin_30_mRNA;Parent=Merlin_30;seqid=Merlin +Merlin GeneMark.hmm exon 22240 24216 . - . ID=Merlin_30_exon;Parent=Merlin_30_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 22240 24216 . - 0 ID=Merlin_30_CDS;Parent=Merlin_30_exon;seqid=Merlin +Merlin GeneMark.hmm gene 24250 26094 -2334.323049 - . ID=Merlin_31;seqid=Merlin +Merlin GeneMark.hmm mRNA 24250 26094 . - . ID=Merlin_31_mRNA;Parent=Merlin_31;seqid=Merlin +Merlin GeneMark.hmm exon 24250 26094 . - . ID=Merlin_31_exon;Parent=Merlin_31_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 24250 26094 . - 0 ID=Merlin_31_CDS;Parent=Merlin_31_exon;seqid=Merlin +Merlin GeneMark.hmm gene 26072 26569 -622.542092 - . ID=Merlin_32;seqid=Merlin +Merlin GeneMark.hmm mRNA 26072 26569 . - . ID=Merlin_32_mRNA;Parent=Merlin_32;seqid=Merlin +Merlin GeneMark.hmm exon 26072 26569 . - . ID=Merlin_32_exon;Parent=Merlin_32_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 26072 26569 . - 0 ID=Merlin_32_CDS;Parent=Merlin_32_exon;seqid=Merlin +Merlin GeneMark.hmm gene 26572 27390 -1062.517306 - . ID=Merlin_33;seqid=Merlin +Merlin GeneMark.hmm mRNA 26572 27390 . - . ID=Merlin_33_mRNA;Parent=Merlin_33;seqid=Merlin +Merlin GeneMark.hmm exon 26572 27390 . - . ID=Merlin_33_exon;Parent=Merlin_33_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 26572 27390 . - 0 ID=Merlin_33_CDS;Parent=Merlin_33_exon;seqid=Merlin +Merlin GeneMark.hmm gene 27434 28204 -971.349898 - . ID=Merlin_34;seqid=Merlin +Merlin GeneMark.hmm mRNA 27434 28204 . - . ID=Merlin_34_mRNA;Parent=Merlin_34;seqid=Merlin +Merlin GeneMark.hmm exon 27434 28204 . - . ID=Merlin_34_exon;Parent=Merlin_34_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 27434 28204 . - 0 ID=Merlin_34_CDS;Parent=Merlin_34_exon;seqid=Merlin +Merlin GeneMark.hmm gene 28201 29130 -1172.195550 - . ID=Merlin_35;seqid=Merlin +Merlin GeneMark.hmm mRNA 28201 29130 . - . ID=Merlin_35_mRNA;Parent=Merlin_35;seqid=Merlin +Merlin GeneMark.hmm exon 28201 29130 . - . ID=Merlin_35_exon;Parent=Merlin_35_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 28201 29130 . - 0 ID=Merlin_35_CDS;Parent=Merlin_35_exon;seqid=Merlin +Merlin GeneMark.hmm gene 29162 30553 -1754.882559 - . ID=Merlin_36;seqid=Merlin +Merlin GeneMark.hmm mRNA 29162 30553 . - . ID=Merlin_36_mRNA;Parent=Merlin_36;seqid=Merlin +Merlin GeneMark.hmm exon 29162 30553 . - . ID=Merlin_36_exon;Parent=Merlin_36_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 29162 30553 . - 0 ID=Merlin_36_CDS;Parent=Merlin_36_exon;seqid=Merlin +Merlin GeneMark.hmm gene 30564 31982 -1840.409176 - . ID=Merlin_37;seqid=Merlin +Merlin GeneMark.hmm mRNA 30564 31982 . - . ID=Merlin_37_mRNA;Parent=Merlin_37;seqid=Merlin +Merlin GeneMark.hmm exon 30564 31982 . - . ID=Merlin_37_exon;Parent=Merlin_37_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 30564 31982 . - 0 ID=Merlin_37_CDS;Parent=Merlin_37_exon;seqid=Merlin +Merlin GeneMark.hmm gene 31982 32632 -810.715921 - . ID=Merlin_38;seqid=Merlin +Merlin GeneMark.hmm mRNA 31982 32632 . - . ID=Merlin_38_mRNA;Parent=Merlin_38;seqid=Merlin +Merlin GeneMark.hmm exon 31982 32632 . - . ID=Merlin_38_exon;Parent=Merlin_38_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 31982 32632 . - 0 ID=Merlin_38_CDS;Parent=Merlin_38_exon;seqid=Merlin +Merlin GeneMark.hmm gene 32632 34437 -2286.512966 - . ID=Merlin_39;seqid=Merlin +Merlin GeneMark.hmm mRNA 32632 34437 . - . ID=Merlin_39_mRNA;Parent=Merlin_39;seqid=Merlin +Merlin GeneMark.hmm exon 32632 34437 . - . ID=Merlin_39_exon;Parent=Merlin_39_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 32632 34437 . - 0 ID=Merlin_39_CDS;Parent=Merlin_39_exon;seqid=Merlin +Merlin GeneMark.hmm gene 34434 35300 -1103.339440 - . ID=Merlin_40;seqid=Merlin +Merlin GeneMark.hmm mRNA 34434 35300 . - . ID=Merlin_40_mRNA;Parent=Merlin_40;seqid=Merlin +Merlin GeneMark.hmm exon 34434 35300 . - . ID=Merlin_40_exon;Parent=Merlin_40_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 34434 35300 . - 0 ID=Merlin_40_CDS;Parent=Merlin_40_exon;seqid=Merlin +Merlin GeneMark.hmm gene 35372 36385 -1286.607331 - . ID=Merlin_41;seqid=Merlin +Merlin GeneMark.hmm mRNA 35372 36385 . - . ID=Merlin_41_mRNA;Parent=Merlin_41;seqid=Merlin +Merlin GeneMark.hmm exon 35372 36385 . - . ID=Merlin_41_exon;Parent=Merlin_41_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 35372 36385 . - 0 ID=Merlin_41_CDS;Parent=Merlin_41_exon;seqid=Merlin +Merlin GeneMark.hmm gene 36378 39479 -3926.862479 - . ID=Merlin_42;seqid=Merlin +Merlin GeneMark.hmm mRNA 36378 39479 . - . ID=Merlin_42_mRNA;Parent=Merlin_42;seqid=Merlin +Merlin GeneMark.hmm exon 36378 39479 . - . ID=Merlin_42_exon;Parent=Merlin_42_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 36378 39479 . - 0 ID=Merlin_42_CDS;Parent=Merlin_42_exon;seqid=Merlin +Merlin GeneMark.hmm gene 39476 41416 -2421.657174 - . ID=Merlin_43;seqid=Merlin +Merlin GeneMark.hmm mRNA 39476 41416 . - . ID=Merlin_43_mRNA;Parent=Merlin_43;seqid=Merlin +Merlin GeneMark.hmm exon 39476 41416 . - . ID=Merlin_43_exon;Parent=Merlin_43_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 39476 41416 . - 0 ID=Merlin_43_CDS;Parent=Merlin_43_exon;seqid=Merlin +Merlin GeneMark.hmm gene 41416 41709 -381.858612 - . ID=Merlin_44;seqid=Merlin +Merlin GeneMark.hmm mRNA 41416 41709 . - . ID=Merlin_44_mRNA;Parent=Merlin_44;seqid=Merlin +Merlin GeneMark.hmm exon 41416 41709 . - . ID=Merlin_44_exon;Parent=Merlin_44_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 41416 41709 . - 0 ID=Merlin_44_CDS;Parent=Merlin_44_exon;seqid=Merlin +Merlin GeneMark.hmm gene 41709 42224 -673.160274 - . ID=Merlin_45;seqid=Merlin +Merlin GeneMark.hmm mRNA 41709 42224 . - . ID=Merlin_45_mRNA;Parent=Merlin_45;seqid=Merlin +Merlin GeneMark.hmm exon 41709 42224 . - . ID=Merlin_45_exon;Parent=Merlin_45_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 41709 42224 . - 0 ID=Merlin_45_CDS;Parent=Merlin_45_exon;seqid=Merlin +Merlin GeneMark.hmm gene 42224 43951 -2203.710381 - . ID=Merlin_46;seqid=Merlin +Merlin GeneMark.hmm mRNA 42224 43951 . - . ID=Merlin_46_mRNA;Parent=Merlin_46;seqid=Merlin +Merlin GeneMark.hmm exon 42224 43951 . - . ID=Merlin_46_exon;Parent=Merlin_46_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 42224 43951 . - 0 ID=Merlin_46_CDS;Parent=Merlin_46_exon;seqid=Merlin +Merlin GeneMark.hmm gene 43951 44526 -730.479121 - . ID=Merlin_47;seqid=Merlin +Merlin GeneMark.hmm mRNA 43951 44526 . - . ID=Merlin_47_mRNA;Parent=Merlin_47;seqid=Merlin +Merlin GeneMark.hmm exon 43951 44526 . - . ID=Merlin_47_exon;Parent=Merlin_47_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 43951 44526 . - 0 ID=Merlin_47_CDS;Parent=Merlin_47_exon;seqid=Merlin +Merlin GeneMark.hmm gene 44576 45025 -562.019925 + . ID=Merlin_48;seqid=Merlin +Merlin GeneMark.hmm mRNA 44576 45025 . + . ID=Merlin_48_mRNA;Parent=Merlin_48;seqid=Merlin +Merlin GeneMark.hmm exon 44576 45025 . + . ID=Merlin_48_exon;Parent=Merlin_48_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 44576 45025 . + 0 ID=Merlin_48_CDS;Parent=Merlin_48_exon;seqid=Merlin +Merlin GeneMark.hmm gene 45025 45855 -1066.702009 + . ID=Merlin_49;seqid=Merlin +Merlin GeneMark.hmm mRNA 45025 45855 . + . ID=Merlin_49_mRNA;Parent=Merlin_49;seqid=Merlin +Merlin GeneMark.hmm exon 45025 45855 . + . ID=Merlin_49_exon;Parent=Merlin_49_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 45025 45855 . + 0 ID=Merlin_49_CDS;Parent=Merlin_49_exon;seqid=Merlin +Merlin GeneMark.hmm gene 45940 46527 -776.360306 + . ID=Merlin_50;seqid=Merlin +Merlin GeneMark.hmm mRNA 45940 46527 . + . ID=Merlin_50_mRNA;Parent=Merlin_50;seqid=Merlin +Merlin GeneMark.hmm exon 45940 46527 . + . ID=Merlin_50_exon;Parent=Merlin_50_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 45940 46527 . + 0 ID=Merlin_50_CDS;Parent=Merlin_50_exon;seqid=Merlin +Merlin GeneMark.hmm gene 46527 47255 -921.088284 + . ID=Merlin_51;seqid=Merlin +Merlin GeneMark.hmm mRNA 46527 47255 . + . ID=Merlin_51_mRNA;Parent=Merlin_51;seqid=Merlin +Merlin GeneMark.hmm exon 46527 47255 . + . ID=Merlin_51_exon;Parent=Merlin_51_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 46527 47255 . + 0 ID=Merlin_51_CDS;Parent=Merlin_51_exon;seqid=Merlin +Merlin GeneMark.hmm gene 47252 47485 -286.785634 + . ID=Merlin_52;seqid=Merlin +Merlin GeneMark.hmm mRNA 47252 47485 . + . ID=Merlin_52_mRNA;Parent=Merlin_52;seqid=Merlin +Merlin GeneMark.hmm exon 47252 47485 . + . ID=Merlin_52_exon;Parent=Merlin_52_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 47252 47485 . + 0 ID=Merlin_52_CDS;Parent=Merlin_52_exon;seqid=Merlin +Merlin GeneMark.hmm gene 47485 47940 -595.997014 + . ID=Merlin_53;seqid=Merlin +Merlin GeneMark.hmm mRNA 47485 47940 . + . ID=Merlin_53_mRNA;Parent=Merlin_53;seqid=Merlin +Merlin GeneMark.hmm exon 47485 47940 . + . ID=Merlin_53_exon;Parent=Merlin_53_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 47485 47940 . + 0 ID=Merlin_53_CDS;Parent=Merlin_53_exon;seqid=Merlin +Merlin GeneMark.hmm gene 47937 48143 -259.350499 + . ID=Merlin_54;seqid=Merlin +Merlin GeneMark.hmm mRNA 47937 48143 . + . ID=Merlin_54_mRNA;Parent=Merlin_54;seqid=Merlin +Merlin GeneMark.hmm exon 47937 48143 . + . ID=Merlin_54_exon;Parent=Merlin_54_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 47937 48143 . + 0 ID=Merlin_54_CDS;Parent=Merlin_54_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48140 48358 -277.240023 + . ID=Merlin_55;seqid=Merlin +Merlin GeneMark.hmm mRNA 48140 48358 . + . ID=Merlin_55_mRNA;Parent=Merlin_55;seqid=Merlin +Merlin GeneMark.hmm exon 48140 48358 . + . ID=Merlin_55_exon;Parent=Merlin_55_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48140 48358 . + 0 ID=Merlin_55_CDS;Parent=Merlin_55_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48418 48600 -230.583168 + . ID=Merlin_56;seqid=Merlin +Merlin GeneMark.hmm mRNA 48418 48600 . + . ID=Merlin_56_mRNA;Parent=Merlin_56;seqid=Merlin +Merlin GeneMark.hmm exon 48418 48600 . + . ID=Merlin_56_exon;Parent=Merlin_56_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48418 48600 . + 0 ID=Merlin_56_CDS;Parent=Merlin_56_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48584 48769 -232.687067 + . ID=Merlin_57;seqid=Merlin +Merlin GeneMark.hmm mRNA 48584 48769 . + . ID=Merlin_57_mRNA;Parent=Merlin_57;seqid=Merlin +Merlin GeneMark.hmm exon 48584 48769 . + . ID=Merlin_57_exon;Parent=Merlin_57_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48584 48769 . + 0 ID=Merlin_57_CDS;Parent=Merlin_57_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48826 49053 -288.143395 + . ID=Merlin_58;seqid=Merlin +Merlin GeneMark.hmm mRNA 48826 49053 . + . ID=Merlin_58_mRNA;Parent=Merlin_58;seqid=Merlin +Merlin GeneMark.hmm exon 48826 49053 . + . ID=Merlin_58_exon;Parent=Merlin_58_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48826 49053 . + 0 ID=Merlin_58_CDS;Parent=Merlin_58_exon;seqid=Merlin +Merlin GeneMark.hmm gene 49076 49432 -449.304895 + . ID=Merlin_59;seqid=Merlin +Merlin GeneMark.hmm mRNA 49076 49432 . + . ID=Merlin_59_mRNA;Parent=Merlin_59;seqid=Merlin +Merlin GeneMark.hmm exon 49076 49432 . + . ID=Merlin_59_exon;Parent=Merlin_59_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 49076 49432 . + 0 ID=Merlin_59_CDS;Parent=Merlin_59_exon;seqid=Merlin +Merlin GeneMark.hmm gene 49844 50110 -322.091381 + . ID=Merlin_60;seqid=Merlin +Merlin GeneMark.hmm mRNA 49844 50110 . + . ID=Merlin_60_mRNA;Parent=Merlin_60;seqid=Merlin +Merlin GeneMark.hmm exon 49844 50110 . + . ID=Merlin_60_exon;Parent=Merlin_60_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 49844 50110 . + 0 ID=Merlin_60_CDS;Parent=Merlin_60_exon;seqid=Merlin +Merlin GeneMark.hmm gene 50983 51234 -301.882768 + . ID=Merlin_61;seqid=Merlin +Merlin GeneMark.hmm mRNA 50983 51234 . + . ID=Merlin_61_mRNA;Parent=Merlin_61;seqid=Merlin +Merlin GeneMark.hmm exon 50983 51234 . + . ID=Merlin_61_exon;Parent=Merlin_61_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 50983 51234 . + 0 ID=Merlin_61_CDS;Parent=Merlin_61_exon;seqid=Merlin +Merlin GeneMark.hmm gene 51596 51838 -304.801536 + . ID=Merlin_62;seqid=Merlin +Merlin GeneMark.hmm mRNA 51596 51838 . + . ID=Merlin_62_mRNA;Parent=Merlin_62;seqid=Merlin +Merlin GeneMark.hmm exon 51596 51838 . + . ID=Merlin_62_exon;Parent=Merlin_62_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 51596 51838 . + 0 ID=Merlin_62_CDS;Parent=Merlin_62_exon;seqid=Merlin +Merlin GeneMark.hmm gene 51835 52182 -434.777109 + . ID=Merlin_63;seqid=Merlin +Merlin GeneMark.hmm mRNA 51835 52182 . + . ID=Merlin_63_mRNA;Parent=Merlin_63;seqid=Merlin +Merlin GeneMark.hmm exon 51835 52182 . + . ID=Merlin_63_exon;Parent=Merlin_63_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 51835 52182 . + 0 ID=Merlin_63_CDS;Parent=Merlin_63_exon;seqid=Merlin +Merlin GeneMark.hmm gene 52175 52684 -629.023983 + . ID=Merlin_64;seqid=Merlin +Merlin GeneMark.hmm mRNA 52175 52684 . + . ID=Merlin_64_mRNA;Parent=Merlin_64;seqid=Merlin +Merlin GeneMark.hmm exon 52175 52684 . + . ID=Merlin_64_exon;Parent=Merlin_64_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 52175 52684 . + 0 ID=Merlin_64_CDS;Parent=Merlin_64_exon;seqid=Merlin +Merlin GeneMark.hmm gene 52681 52827 -183.076828 + . ID=Merlin_65;seqid=Merlin +Merlin GeneMark.hmm mRNA 52681 52827 . + . ID=Merlin_65_mRNA;Parent=Merlin_65;seqid=Merlin +Merlin GeneMark.hmm exon 52681 52827 . + . ID=Merlin_65_exon;Parent=Merlin_65_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 52681 52827 . + 0 ID=Merlin_65_CDS;Parent=Merlin_65_exon;seqid=Merlin +Merlin GeneMark.hmm gene 52806 53030 -287.687980 + . ID=Merlin_66;seqid=Merlin +Merlin GeneMark.hmm mRNA 52806 53030 . + . ID=Merlin_66_mRNA;Parent=Merlin_66;seqid=Merlin +Merlin GeneMark.hmm exon 52806 53030 . + . ID=Merlin_66_exon;Parent=Merlin_66_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 52806 53030 . + 0 ID=Merlin_66_CDS;Parent=Merlin_66_exon;seqid=Merlin +Merlin GeneMark.hmm gene 53032 53475 -570.370348 + . ID=Merlin_67;seqid=Merlin +Merlin GeneMark.hmm mRNA 53032 53475 . + . ID=Merlin_67_mRNA;Parent=Merlin_67;seqid=Merlin +Merlin GeneMark.hmm exon 53032 53475 . + . ID=Merlin_67_exon;Parent=Merlin_67_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 53032 53475 . + 0 ID=Merlin_67_CDS;Parent=Merlin_67_exon;seqid=Merlin +Merlin GeneMark.hmm gene 53647 54225 -757.038069 + . ID=Merlin_68;seqid=Merlin +Merlin GeneMark.hmm mRNA 53647 54225 . + . ID=Merlin_68_mRNA;Parent=Merlin_68;seqid=Merlin +Merlin GeneMark.hmm exon 53647 54225 . + . ID=Merlin_68_exon;Parent=Merlin_68_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 53647 54225 . + 0 ID=Merlin_68_CDS;Parent=Merlin_68_exon;seqid=Merlin +Merlin GeneMark.hmm gene 54316 54516 -236.842212 + . ID=Merlin_69;seqid=Merlin +Merlin GeneMark.hmm mRNA 54316 54516 . + . ID=Merlin_69_mRNA;Parent=Merlin_69;seqid=Merlin +Merlin GeneMark.hmm exon 54316 54516 . + . ID=Merlin_69_exon;Parent=Merlin_69_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 54316 54516 . + 0 ID=Merlin_69_CDS;Parent=Merlin_69_exon;seqid=Merlin +Merlin GeneMark.hmm gene 54569 55168 -748.986136 + . ID=Merlin_70;seqid=Merlin +Merlin GeneMark.hmm mRNA 54569 55168 . + . ID=Merlin_70_mRNA;Parent=Merlin_70;seqid=Merlin +Merlin GeneMark.hmm exon 54569 55168 . + . ID=Merlin_70_exon;Parent=Merlin_70_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 54569 55168 . + 0 ID=Merlin_70_CDS;Parent=Merlin_70_exon;seqid=Merlin +Merlin GeneMark.hmm gene 55216 55860 -813.197162 + . ID=Merlin_71;seqid=Merlin +Merlin GeneMark.hmm mRNA 55216 55860 . + . ID=Merlin_71_mRNA;Parent=Merlin_71;seqid=Merlin +Merlin GeneMark.hmm exon 55216 55860 . + . ID=Merlin_71_exon;Parent=Merlin_71_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 55216 55860 . + 0 ID=Merlin_71_CDS;Parent=Merlin_71_exon;seqid=Merlin +Merlin GeneMark.hmm gene 55857 56279 -536.845669 + . ID=Merlin_72;seqid=Merlin +Merlin GeneMark.hmm mRNA 55857 56279 . + . ID=Merlin_72_mRNA;Parent=Merlin_72;seqid=Merlin +Merlin GeneMark.hmm exon 55857 56279 . + . ID=Merlin_72_exon;Parent=Merlin_72_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 55857 56279 . + 0 ID=Merlin_72_CDS;Parent=Merlin_72_exon;seqid=Merlin +Merlin GeneMark.hmm gene 56276 56644 -463.468418 + . ID=Merlin_73;seqid=Merlin +Merlin GeneMark.hmm mRNA 56276 56644 . + . ID=Merlin_73_mRNA;Parent=Merlin_73;seqid=Merlin +Merlin GeneMark.hmm exon 56276 56644 . + . ID=Merlin_73_exon;Parent=Merlin_73_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 56276 56644 . + 0 ID=Merlin_73_CDS;Parent=Merlin_73_exon;seqid=Merlin +Merlin GeneMark.hmm gene 56634 56894 -313.595651 + . ID=Merlin_74;seqid=Merlin +Merlin GeneMark.hmm mRNA 56634 56894 . + . ID=Merlin_74_mRNA;Parent=Merlin_74;seqid=Merlin +Merlin GeneMark.hmm exon 56634 56894 . + . ID=Merlin_74_exon;Parent=Merlin_74_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 56634 56894 . + 0 ID=Merlin_74_CDS;Parent=Merlin_74_exon;seqid=Merlin +Merlin GeneMark.hmm gene 56894 57172 -343.261028 + . ID=Merlin_75;seqid=Merlin +Merlin GeneMark.hmm mRNA 56894 57172 . + . ID=Merlin_75_mRNA;Parent=Merlin_75;seqid=Merlin +Merlin GeneMark.hmm exon 56894 57172 . + . ID=Merlin_75_exon;Parent=Merlin_75_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 56894 57172 . + 0 ID=Merlin_75_CDS;Parent=Merlin_75_exon;seqid=Merlin +Merlin GeneMark.hmm gene 57182 57403 -269.950515 + . ID=Merlin_76;seqid=Merlin +Merlin GeneMark.hmm mRNA 57182 57403 . + . ID=Merlin_76_mRNA;Parent=Merlin_76;seqid=Merlin +Merlin GeneMark.hmm exon 57182 57403 . + . ID=Merlin_76_exon;Parent=Merlin_76_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 57182 57403 . + 0 ID=Merlin_76_CDS;Parent=Merlin_76_exon;seqid=Merlin +Merlin GeneMark.hmm gene 57499 57786 -373.177871 + . ID=Merlin_77;seqid=Merlin +Merlin GeneMark.hmm mRNA 57499 57786 . + . ID=Merlin_77_mRNA;Parent=Merlin_77;seqid=Merlin +Merlin GeneMark.hmm exon 57499 57786 . + . ID=Merlin_77_exon;Parent=Merlin_77_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 57499 57786 . + 0 ID=Merlin_77_CDS;Parent=Merlin_77_exon;seqid=Merlin +Merlin GeneMark.hmm gene 57777 58724 -1215.940307 + . ID=Merlin_78;seqid=Merlin +Merlin GeneMark.hmm mRNA 57777 58724 . + . ID=Merlin_78_mRNA;Parent=Merlin_78;seqid=Merlin +Merlin GeneMark.hmm exon 57777 58724 . + . ID=Merlin_78_exon;Parent=Merlin_78_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 57777 58724 . + 0 ID=Merlin_78_CDS;Parent=Merlin_78_exon;seqid=Merlin +Merlin GeneMark.hmm gene 58717 58857 -173.930421 + . ID=Merlin_79;seqid=Merlin +Merlin GeneMark.hmm mRNA 58717 58857 . + . ID=Merlin_79_mRNA;Parent=Merlin_79;seqid=Merlin +Merlin GeneMark.hmm exon 58717 58857 . + . ID=Merlin_79_exon;Parent=Merlin_79_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 58717 58857 . + 0 ID=Merlin_79_CDS;Parent=Merlin_79_exon;seqid=Merlin +Merlin GeneMark.hmm gene 58872 59561 -880.645375 + . ID=Merlin_80;seqid=Merlin +Merlin GeneMark.hmm mRNA 58872 59561 . + . ID=Merlin_80_mRNA;Parent=Merlin_80;seqid=Merlin +Merlin GeneMark.hmm exon 58872 59561 . + . ID=Merlin_80_exon;Parent=Merlin_80_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 58872 59561 . + 0 ID=Merlin_80_CDS;Parent=Merlin_80_exon;seqid=Merlin +Merlin GeneMark.hmm gene 59561 59899 -428.109831 + . ID=Merlin_81;seqid=Merlin +Merlin GeneMark.hmm mRNA 59561 59899 . + . ID=Merlin_81_mRNA;Parent=Merlin_81;seqid=Merlin +Merlin GeneMark.hmm exon 59561 59899 . + . ID=Merlin_81_exon;Parent=Merlin_81_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 59561 59899 . + 0 ID=Merlin_81_CDS;Parent=Merlin_81_exon;seqid=Merlin +Merlin GeneMark.hmm gene 59896 60144 -306.923987 + . ID=Merlin_82;seqid=Merlin +Merlin GeneMark.hmm mRNA 59896 60144 . + . ID=Merlin_82_mRNA;Parent=Merlin_82;seqid=Merlin +Merlin GeneMark.hmm exon 59896 60144 . + . ID=Merlin_82_exon;Parent=Merlin_82_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 59896 60144 . + 0 ID=Merlin_82_CDS;Parent=Merlin_82_exon;seqid=Merlin +Merlin GeneMark.hmm gene 60144 60386 -304.982653 + . ID=Merlin_83;seqid=Merlin +Merlin GeneMark.hmm mRNA 60144 60386 . + . ID=Merlin_83_mRNA;Parent=Merlin_83;seqid=Merlin +Merlin GeneMark.hmm exon 60144 60386 . + . ID=Merlin_83_exon;Parent=Merlin_83_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 60144 60386 . + 0 ID=Merlin_83_CDS;Parent=Merlin_83_exon;seqid=Merlin +Merlin GeneMark.hmm gene 60379 60840 -594.547870 + . ID=Merlin_84;seqid=Merlin +Merlin GeneMark.hmm mRNA 60379 60840 . + . ID=Merlin_84_mRNA;Parent=Merlin_84;seqid=Merlin +Merlin GeneMark.hmm exon 60379 60840 . + . ID=Merlin_84_exon;Parent=Merlin_84_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 60379 60840 . + 0 ID=Merlin_84_CDS;Parent=Merlin_84_exon;seqid=Merlin +Merlin GeneMark.hmm gene 60869 61369 -617.611500 + . ID=Merlin_85;seqid=Merlin +Merlin GeneMark.hmm mRNA 60869 61369 . + . ID=Merlin_85_mRNA;Parent=Merlin_85;seqid=Merlin +Merlin GeneMark.hmm exon 60869 61369 . + . ID=Merlin_85_exon;Parent=Merlin_85_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 60869 61369 . + 0 ID=Merlin_85_CDS;Parent=Merlin_85_exon;seqid=Merlin +Merlin GeneMark.hmm gene 61356 61703 -422.353181 + . ID=Merlin_86;seqid=Merlin +Merlin GeneMark.hmm mRNA 61356 61703 . + . ID=Merlin_86_mRNA;Parent=Merlin_86;seqid=Merlin +Merlin GeneMark.hmm exon 61356 61703 . + . ID=Merlin_86_exon;Parent=Merlin_86_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 61356 61703 . + 0 ID=Merlin_86_CDS;Parent=Merlin_86_exon;seqid=Merlin +Merlin GeneMark.hmm gene 61760 62167 -519.180141 + . ID=Merlin_87;seqid=Merlin +Merlin GeneMark.hmm mRNA 61760 62167 . + . ID=Merlin_87_mRNA;Parent=Merlin_87;seqid=Merlin +Merlin GeneMark.hmm exon 61760 62167 . + . ID=Merlin_87_exon;Parent=Merlin_87_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 61760 62167 . + 0 ID=Merlin_87_CDS;Parent=Merlin_87_exon;seqid=Merlin +Merlin GeneMark.hmm gene 62359 62889 -691.422401 + . ID=Merlin_88;seqid=Merlin +Merlin GeneMark.hmm mRNA 62359 62889 . + . ID=Merlin_88_mRNA;Parent=Merlin_88;seqid=Merlin +Merlin GeneMark.hmm exon 62359 62889 . + . ID=Merlin_88_exon;Parent=Merlin_88_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 62359 62889 . + 0 ID=Merlin_88_CDS;Parent=Merlin_88_exon;seqid=Merlin +Merlin GeneMark.hmm gene 62886 63131 -315.050979 + . ID=Merlin_89;seqid=Merlin +Merlin GeneMark.hmm mRNA 62886 63131 . + . ID=Merlin_89_mRNA;Parent=Merlin_89;seqid=Merlin +Merlin GeneMark.hmm exon 62886 63131 . + . ID=Merlin_89_exon;Parent=Merlin_89_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 62886 63131 . + 0 ID=Merlin_89_CDS;Parent=Merlin_89_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63124 63435 -400.565460 + . ID=Merlin_90;seqid=Merlin +Merlin GeneMark.hmm mRNA 63124 63435 . + . ID=Merlin_90_mRNA;Parent=Merlin_90;seqid=Merlin +Merlin GeneMark.hmm exon 63124 63435 . + . ID=Merlin_90_exon;Parent=Merlin_90_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63124 63435 . + 0 ID=Merlin_90_CDS;Parent=Merlin_90_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63432 63710 -335.031911 + . ID=Merlin_91;seqid=Merlin +Merlin GeneMark.hmm mRNA 63432 63710 . + . ID=Merlin_91_mRNA;Parent=Merlin_91;seqid=Merlin +Merlin GeneMark.hmm exon 63432 63710 . + . ID=Merlin_91_exon;Parent=Merlin_91_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63432 63710 . + 0 ID=Merlin_91_CDS;Parent=Merlin_91_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63710 63883 -203.175066 + . ID=Merlin_92;seqid=Merlin +Merlin GeneMark.hmm mRNA 63710 63883 . + . ID=Merlin_92_mRNA;Parent=Merlin_92;seqid=Merlin +Merlin GeneMark.hmm exon 63710 63883 . + . ID=Merlin_92_exon;Parent=Merlin_92_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63710 63883 . + 0 ID=Merlin_92_CDS;Parent=Merlin_92_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63942 64406 -597.655245 + . ID=Merlin_93;seqid=Merlin +Merlin GeneMark.hmm mRNA 63942 64406 . + . ID=Merlin_93_mRNA;Parent=Merlin_93;seqid=Merlin +Merlin GeneMark.hmm exon 63942 64406 . + . ID=Merlin_93_exon;Parent=Merlin_93_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63942 64406 . + 0 ID=Merlin_93_CDS;Parent=Merlin_93_exon;seqid=Merlin +Merlin GeneMark.hmm gene 64414 64962 -713.810677 + . ID=Merlin_94;seqid=Merlin +Merlin GeneMark.hmm mRNA 64414 64962 . + . ID=Merlin_94_mRNA;Parent=Merlin_94;seqid=Merlin +Merlin GeneMark.hmm exon 64414 64962 . + . ID=Merlin_94_exon;Parent=Merlin_94_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 64414 64962 . + 0 ID=Merlin_94_CDS;Parent=Merlin_94_exon;seqid=Merlin +Merlin GeneMark.hmm gene 64962 65282 -412.685055 + . ID=Merlin_95;seqid=Merlin +Merlin GeneMark.hmm mRNA 64962 65282 . + . ID=Merlin_95_mRNA;Parent=Merlin_95;seqid=Merlin +Merlin GeneMark.hmm exon 64962 65282 . + . ID=Merlin_95_exon;Parent=Merlin_95_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 64962 65282 . + 0 ID=Merlin_95_CDS;Parent=Merlin_95_exon;seqid=Merlin +Merlin GeneMark.hmm gene 65303 65683 -496.639498 + . ID=Merlin_96;seqid=Merlin +Merlin GeneMark.hmm mRNA 65303 65683 . + . ID=Merlin_96_mRNA;Parent=Merlin_96;seqid=Merlin +Merlin GeneMark.hmm exon 65303 65683 . + . ID=Merlin_96_exon;Parent=Merlin_96_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 65303 65683 . + 0 ID=Merlin_96_CDS;Parent=Merlin_96_exon;seqid=Merlin +Merlin GeneMark.hmm gene 65676 66128 -573.822848 + . ID=Merlin_97;seqid=Merlin +Merlin GeneMark.hmm mRNA 65676 66128 . + . ID=Merlin_97_mRNA;Parent=Merlin_97;seqid=Merlin +Merlin GeneMark.hmm exon 65676 66128 . + . ID=Merlin_97_exon;Parent=Merlin_97_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 65676 66128 . + 0 ID=Merlin_97_CDS;Parent=Merlin_97_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66128 66337 -267.423513 + . ID=Merlin_98;seqid=Merlin +Merlin GeneMark.hmm mRNA 66128 66337 . + . ID=Merlin_98_mRNA;Parent=Merlin_98;seqid=Merlin +Merlin GeneMark.hmm exon 66128 66337 . + . ID=Merlin_98_exon;Parent=Merlin_98_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66128 66337 . + 0 ID=Merlin_98_CDS;Parent=Merlin_98_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66328 66507 -214.194539 + . ID=Merlin_99;seqid=Merlin +Merlin GeneMark.hmm mRNA 66328 66507 . + . ID=Merlin_99_mRNA;Parent=Merlin_99;seqid=Merlin +Merlin GeneMark.hmm exon 66328 66507 . + . ID=Merlin_99_exon;Parent=Merlin_99_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66328 66507 . + 0 ID=Merlin_99_CDS;Parent=Merlin_99_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66504 66683 -217.450578 + . ID=Merlin_100;seqid=Merlin +Merlin GeneMark.hmm mRNA 66504 66683 . + . ID=Merlin_100_mRNA;Parent=Merlin_100;seqid=Merlin +Merlin GeneMark.hmm exon 66504 66683 . + . ID=Merlin_100_exon;Parent=Merlin_100_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66504 66683 . + 0 ID=Merlin_100_CDS;Parent=Merlin_100_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66680 66871 -235.908196 + . ID=Merlin_101;seqid=Merlin +Merlin GeneMark.hmm mRNA 66680 66871 . + . ID=Merlin_101_mRNA;Parent=Merlin_101;seqid=Merlin +Merlin GeneMark.hmm exon 66680 66871 . + . ID=Merlin_101_exon;Parent=Merlin_101_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66680 66871 . + 0 ID=Merlin_101_CDS;Parent=Merlin_101_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66873 67058 -233.275820 + . ID=Merlin_102;seqid=Merlin +Merlin GeneMark.hmm mRNA 66873 67058 . + . ID=Merlin_102_mRNA;Parent=Merlin_102;seqid=Merlin +Merlin GeneMark.hmm exon 66873 67058 . + . ID=Merlin_102_exon;Parent=Merlin_102_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66873 67058 . + 0 ID=Merlin_102_CDS;Parent=Merlin_102_exon;seqid=Merlin +Merlin GeneMark.hmm gene 67058 67267 -264.096823 + . ID=Merlin_103;seqid=Merlin +Merlin GeneMark.hmm mRNA 67058 67267 . + . ID=Merlin_103_mRNA;Parent=Merlin_103;seqid=Merlin +Merlin GeneMark.hmm exon 67058 67267 . + . ID=Merlin_103_exon;Parent=Merlin_103_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 67058 67267 . + 0 ID=Merlin_103_CDS;Parent=Merlin_103_exon;seqid=Merlin +Merlin GeneMark.hmm gene 67267 67845 -752.300357 + . ID=Merlin_104;seqid=Merlin +Merlin GeneMark.hmm mRNA 67267 67845 . + . ID=Merlin_104_mRNA;Parent=Merlin_104;seqid=Merlin +Merlin GeneMark.hmm exon 67267 67845 . + . ID=Merlin_104_exon;Parent=Merlin_104_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 67267 67845 . + 0 ID=Merlin_104_CDS;Parent=Merlin_104_exon;seqid=Merlin +Merlin GeneMark.hmm gene 67970 68128 -196.227328 + . ID=Merlin_105;seqid=Merlin +Merlin GeneMark.hmm mRNA 67970 68128 . + . ID=Merlin_105_mRNA;Parent=Merlin_105;seqid=Merlin +Merlin GeneMark.hmm exon 67970 68128 . + . ID=Merlin_105_exon;Parent=Merlin_105_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 67970 68128 . + 0 ID=Merlin_105_CDS;Parent=Merlin_105_exon;seqid=Merlin +Merlin GeneMark.hmm gene 68125 68280 -186.665512 + . ID=Merlin_106;seqid=Merlin +Merlin GeneMark.hmm mRNA 68125 68280 . + . ID=Merlin_106_mRNA;Parent=Merlin_106;seqid=Merlin +Merlin GeneMark.hmm exon 68125 68280 . + . ID=Merlin_106_exon;Parent=Merlin_106_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 68125 68280 . + 0 ID=Merlin_106_CDS;Parent=Merlin_106_exon;seqid=Merlin +Merlin GeneMark.hmm gene 68345 68728 -480.408576 + . ID=Merlin_107;seqid=Merlin +Merlin GeneMark.hmm mRNA 68345 68728 . + . ID=Merlin_107_mRNA;Parent=Merlin_107;seqid=Merlin +Merlin GeneMark.hmm exon 68345 68728 . + . ID=Merlin_107_exon;Parent=Merlin_107_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 68345 68728 . + 0 ID=Merlin_107_CDS;Parent=Merlin_107_exon;seqid=Merlin +Merlin GeneMark.hmm gene 68787 68999 -267.936260 + . ID=Merlin_108;seqid=Merlin +Merlin GeneMark.hmm mRNA 68787 68999 . + . ID=Merlin_108_mRNA;Parent=Merlin_108;seqid=Merlin +Merlin GeneMark.hmm exon 68787 68999 . + . ID=Merlin_108_exon;Parent=Merlin_108_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 68787 68999 . + 0 ID=Merlin_108_CDS;Parent=Merlin_108_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69008 69295 -369.655354 + . ID=Merlin_109;seqid=Merlin +Merlin GeneMark.hmm mRNA 69008 69295 . + . ID=Merlin_109_mRNA;Parent=Merlin_109;seqid=Merlin +Merlin GeneMark.hmm exon 69008 69295 . + . ID=Merlin_109_exon;Parent=Merlin_109_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69008 69295 . + 0 ID=Merlin_109_CDS;Parent=Merlin_109_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69285 69668 -486.207714 + . ID=Merlin_110;seqid=Merlin +Merlin GeneMark.hmm mRNA 69285 69668 . + . ID=Merlin_110_mRNA;Parent=Merlin_110;seqid=Merlin +Merlin GeneMark.hmm exon 69285 69668 . + . ID=Merlin_110_exon;Parent=Merlin_110_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69285 69668 . + 0 ID=Merlin_110_CDS;Parent=Merlin_110_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69767 69862 -119.090489 + . ID=Merlin_111;seqid=Merlin +Merlin GeneMark.hmm mRNA 69767 69862 . + . ID=Merlin_111_mRNA;Parent=Merlin_111;seqid=Merlin +Merlin GeneMark.hmm exon 69767 69862 . + . ID=Merlin_111_exon;Parent=Merlin_111_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69767 69862 . + 0 ID=Merlin_111_CDS;Parent=Merlin_111_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69859 70023 -200.738602 + . ID=Merlin_112;seqid=Merlin +Merlin GeneMark.hmm mRNA 69859 70023 . + . ID=Merlin_112_mRNA;Parent=Merlin_112;seqid=Merlin +Merlin GeneMark.hmm exon 69859 70023 . + . ID=Merlin_112_exon;Parent=Merlin_112_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69859 70023 . + 0 ID=Merlin_112_CDS;Parent=Merlin_112_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70030 70263 -281.446786 + . ID=Merlin_113;seqid=Merlin +Merlin GeneMark.hmm mRNA 70030 70263 . + . ID=Merlin_113_mRNA;Parent=Merlin_113;seqid=Merlin +Merlin GeneMark.hmm exon 70030 70263 . + . ID=Merlin_113_exon;Parent=Merlin_113_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70030 70263 . + 0 ID=Merlin_113_CDS;Parent=Merlin_113_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70263 70520 -332.653168 + . ID=Merlin_114;seqid=Merlin +Merlin GeneMark.hmm mRNA 70263 70520 . + . ID=Merlin_114_mRNA;Parent=Merlin_114;seqid=Merlin +Merlin GeneMark.hmm exon 70263 70520 . + . ID=Merlin_114_exon;Parent=Merlin_114_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70263 70520 . + 0 ID=Merlin_114_CDS;Parent=Merlin_114_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70517 70780 -336.190173 + . ID=Merlin_115;seqid=Merlin +Merlin GeneMark.hmm mRNA 70517 70780 . + . ID=Merlin_115_mRNA;Parent=Merlin_115;seqid=Merlin +Merlin GeneMark.hmm exon 70517 70780 . + . ID=Merlin_115_exon;Parent=Merlin_115_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70517 70780 . + 0 ID=Merlin_115_CDS;Parent=Merlin_115_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70866 71102 -289.943350 + . ID=Merlin_116;seqid=Merlin +Merlin GeneMark.hmm mRNA 70866 71102 . + . ID=Merlin_116_mRNA;Parent=Merlin_116;seqid=Merlin +Merlin GeneMark.hmm exon 70866 71102 . + . ID=Merlin_116_exon;Parent=Merlin_116_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70866 71102 . + 0 ID=Merlin_116_CDS;Parent=Merlin_116_exon;seqid=Merlin +Merlin GeneMark.hmm gene 71092 71571 -594.658724 + . ID=Merlin_117;seqid=Merlin +Merlin GeneMark.hmm mRNA 71092 71571 . + . ID=Merlin_117_mRNA;Parent=Merlin_117;seqid=Merlin +Merlin GeneMark.hmm exon 71092 71571 . + . ID=Merlin_117_exon;Parent=Merlin_117_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 71092 71571 . + 0 ID=Merlin_117_CDS;Parent=Merlin_117_exon;seqid=Merlin +Merlin GeneMark.hmm gene 71574 72116 -686.096724 + . ID=Merlin_118;seqid=Merlin +Merlin GeneMark.hmm mRNA 71574 72116 . + . ID=Merlin_118_mRNA;Parent=Merlin_118;seqid=Merlin +Merlin GeneMark.hmm exon 71574 72116 . + . ID=Merlin_118_exon;Parent=Merlin_118_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 71574 72116 . + 0 ID=Merlin_118_CDS;Parent=Merlin_118_exon;seqid=Merlin +Merlin GeneMark.hmm gene 72116 73126 -1269.074513 + . ID=Merlin_119;seqid=Merlin +Merlin GeneMark.hmm mRNA 72116 73126 . + . ID=Merlin_119_mRNA;Parent=Merlin_119;seqid=Merlin +Merlin GeneMark.hmm exon 72116 73126 . + . ID=Merlin_119_exon;Parent=Merlin_119_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 72116 73126 . + 0 ID=Merlin_119_CDS;Parent=Merlin_119_exon;seqid=Merlin +Merlin GeneMark.hmm gene 73123 73359 -314.305354 + . ID=Merlin_120;seqid=Merlin +Merlin GeneMark.hmm mRNA 73123 73359 . + . ID=Merlin_120_mRNA;Parent=Merlin_120;seqid=Merlin +Merlin GeneMark.hmm exon 73123 73359 . + . ID=Merlin_120_exon;Parent=Merlin_120_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 73123 73359 . + 0 ID=Merlin_120_CDS;Parent=Merlin_120_exon;seqid=Merlin +Merlin GeneMark.hmm gene 73461 73631 -201.815396 + . ID=Merlin_121;seqid=Merlin +Merlin GeneMark.hmm mRNA 73461 73631 . + . ID=Merlin_121_mRNA;Parent=Merlin_121;seqid=Merlin +Merlin GeneMark.hmm exon 73461 73631 . + . ID=Merlin_121_exon;Parent=Merlin_121_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 73461 73631 . + 0 ID=Merlin_121_CDS;Parent=Merlin_121_exon;seqid=Merlin +Merlin GeneMark.hmm gene 73721 74698 -1210.601194 + . ID=Merlin_122;seqid=Merlin +Merlin GeneMark.hmm mRNA 73721 74698 . + . ID=Merlin_122_mRNA;Parent=Merlin_122;seqid=Merlin +Merlin GeneMark.hmm exon 73721 74698 . + . ID=Merlin_122_exon;Parent=Merlin_122_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 73721 74698 . + 0 ID=Merlin_122_CDS;Parent=Merlin_122_exon;seqid=Merlin +Merlin GeneMark.hmm gene 74744 74893 -185.633773 + . ID=Merlin_123;seqid=Merlin +Merlin GeneMark.hmm mRNA 74744 74893 . + . ID=Merlin_123_mRNA;Parent=Merlin_123;seqid=Merlin +Merlin GeneMark.hmm exon 74744 74893 . + . ID=Merlin_123_exon;Parent=Merlin_123_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 74744 74893 . + 0 ID=Merlin_123_CDS;Parent=Merlin_123_exon;seqid=Merlin +Merlin GeneMark.hmm gene 74890 75141 -315.506963 + . ID=Merlin_124;seqid=Merlin +Merlin GeneMark.hmm mRNA 74890 75141 . + . ID=Merlin_124_mRNA;Parent=Merlin_124;seqid=Merlin +Merlin GeneMark.hmm exon 74890 75141 . + . ID=Merlin_124_exon;Parent=Merlin_124_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 74890 75141 . + 0 ID=Merlin_124_CDS;Parent=Merlin_124_exon;seqid=Merlin +Merlin GeneMark.hmm gene 75141 75602 -594.209518 + . ID=Merlin_125;seqid=Merlin +Merlin GeneMark.hmm mRNA 75141 75602 . + . ID=Merlin_125_mRNA;Parent=Merlin_125;seqid=Merlin +Merlin GeneMark.hmm exon 75141 75602 . + . ID=Merlin_125_exon;Parent=Merlin_125_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 75141 75602 . + 0 ID=Merlin_125_CDS;Parent=Merlin_125_exon;seqid=Merlin +Merlin GeneMark.hmm gene 75602 75865 -344.721707 + . ID=Merlin_126;seqid=Merlin +Merlin GeneMark.hmm mRNA 75602 75865 . + . ID=Merlin_126_mRNA;Parent=Merlin_126;seqid=Merlin +Merlin GeneMark.hmm exon 75602 75865 . + . ID=Merlin_126_exon;Parent=Merlin_126_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 75602 75865 . + 0 ID=Merlin_126_CDS;Parent=Merlin_126_exon;seqid=Merlin +Merlin GeneMark.hmm gene 75856 76044 -230.523164 + . ID=Merlin_127;seqid=Merlin +Merlin GeneMark.hmm mRNA 75856 76044 . + . ID=Merlin_127_mRNA;Parent=Merlin_127;seqid=Merlin +Merlin GeneMark.hmm exon 75856 76044 . + . ID=Merlin_127_exon;Parent=Merlin_127_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 75856 76044 . + 0 ID=Merlin_127_CDS;Parent=Merlin_127_exon;seqid=Merlin +Merlin GeneMark.hmm gene 76041 76367 -416.228479 + . ID=Merlin_128;seqid=Merlin +Merlin GeneMark.hmm mRNA 76041 76367 . + . ID=Merlin_128_mRNA;Parent=Merlin_128;seqid=Merlin +Merlin GeneMark.hmm exon 76041 76367 . + . ID=Merlin_128_exon;Parent=Merlin_128_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 76041 76367 . + 0 ID=Merlin_128_CDS;Parent=Merlin_128_exon;seqid=Merlin +Merlin GeneMark.hmm gene 76546 77334 -987.711287 + . ID=Merlin_129;seqid=Merlin +Merlin GeneMark.hmm mRNA 76546 77334 . + . ID=Merlin_129_mRNA;Parent=Merlin_129;seqid=Merlin +Merlin GeneMark.hmm exon 76546 77334 . + . ID=Merlin_129_exon;Parent=Merlin_129_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 76546 77334 . + 0 ID=Merlin_129_CDS;Parent=Merlin_129_exon;seqid=Merlin +Merlin GeneMark.hmm gene 77420 78424 -1261.524373 + . ID=Merlin_130;seqid=Merlin +Merlin GeneMark.hmm mRNA 77420 78424 . + . ID=Merlin_130_mRNA;Parent=Merlin_130;seqid=Merlin +Merlin GeneMark.hmm exon 77420 78424 . + . ID=Merlin_130_exon;Parent=Merlin_130_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 77420 78424 . + 0 ID=Merlin_130_CDS;Parent=Merlin_130_exon;seqid=Merlin +Merlin GeneMark.hmm gene 78417 78707 -360.350742 + . ID=Merlin_131;seqid=Merlin +Merlin GeneMark.hmm mRNA 78417 78707 . + . ID=Merlin_131_mRNA;Parent=Merlin_131;seqid=Merlin +Merlin GeneMark.hmm exon 78417 78707 . + . ID=Merlin_131_exon;Parent=Merlin_131_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 78417 78707 . + 0 ID=Merlin_131_CDS;Parent=Merlin_131_exon;seqid=Merlin +Merlin GeneMark.hmm gene 78704 79111 -518.845840 + . ID=Merlin_132;seqid=Merlin +Merlin GeneMark.hmm mRNA 78704 79111 . + . ID=Merlin_132_mRNA;Parent=Merlin_132;seqid=Merlin +Merlin GeneMark.hmm exon 78704 79111 . + . ID=Merlin_132_exon;Parent=Merlin_132_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 78704 79111 . + 0 ID=Merlin_132_CDS;Parent=Merlin_132_exon;seqid=Merlin +Merlin GeneMark.hmm gene 79111 79617 -613.282382 + . ID=Merlin_133;seqid=Merlin +Merlin GeneMark.hmm mRNA 79111 79617 . + . ID=Merlin_133_mRNA;Parent=Merlin_133;seqid=Merlin +Merlin GeneMark.hmm exon 79111 79617 . + . ID=Merlin_133_exon;Parent=Merlin_133_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 79111 79617 . + 0 ID=Merlin_133_CDS;Parent=Merlin_133_exon;seqid=Merlin +Merlin GeneMark.hmm gene 79614 79919 -369.305081 + . ID=Merlin_134;seqid=Merlin +Merlin GeneMark.hmm mRNA 79614 79919 . + . ID=Merlin_134_mRNA;Parent=Merlin_134;seqid=Merlin +Merlin GeneMark.hmm exon 79614 79919 . + . ID=Merlin_134_exon;Parent=Merlin_134_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 79614 79919 . + 0 ID=Merlin_134_CDS;Parent=Merlin_134_exon;seqid=Merlin +Merlin GeneMark.hmm gene 79933 80160 -288.575732 + . ID=Merlin_135;seqid=Merlin +Merlin GeneMark.hmm mRNA 79933 80160 . + . ID=Merlin_135_mRNA;Parent=Merlin_135;seqid=Merlin +Merlin GeneMark.hmm exon 79933 80160 . + . ID=Merlin_135_exon;Parent=Merlin_135_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 79933 80160 . + 0 ID=Merlin_135_CDS;Parent=Merlin_135_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80154 80417 -324.958009 + . ID=Merlin_136;seqid=Merlin +Merlin GeneMark.hmm mRNA 80154 80417 . + . ID=Merlin_136_mRNA;Parent=Merlin_136;seqid=Merlin +Merlin GeneMark.hmm exon 80154 80417 . + . ID=Merlin_136_exon;Parent=Merlin_136_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80154 80417 . + 0 ID=Merlin_136_CDS;Parent=Merlin_136_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80414 80623 -254.916892 + . ID=Merlin_137;seqid=Merlin +Merlin GeneMark.hmm mRNA 80414 80623 . + . ID=Merlin_137_mRNA;Parent=Merlin_137;seqid=Merlin +Merlin GeneMark.hmm exon 80414 80623 . + . ID=Merlin_137_exon;Parent=Merlin_137_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80414 80623 . + 0 ID=Merlin_137_CDS;Parent=Merlin_137_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80620 80949 -405.138197 + . ID=Merlin_138;seqid=Merlin +Merlin GeneMark.hmm mRNA 80620 80949 . + . ID=Merlin_138_mRNA;Parent=Merlin_138;seqid=Merlin +Merlin GeneMark.hmm exon 80620 80949 . + . ID=Merlin_138_exon;Parent=Merlin_138_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80620 80949 . + 0 ID=Merlin_138_CDS;Parent=Merlin_138_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80939 81091 -189.705268 + . ID=Merlin_139;seqid=Merlin +Merlin GeneMark.hmm mRNA 80939 81091 . + . ID=Merlin_139_mRNA;Parent=Merlin_139;seqid=Merlin +Merlin GeneMark.hmm exon 80939 81091 . + . ID=Merlin_139_exon;Parent=Merlin_139_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80939 81091 . + 0 ID=Merlin_139_CDS;Parent=Merlin_139_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81088 81396 -379.041172 + . ID=Merlin_140;seqid=Merlin +Merlin GeneMark.hmm mRNA 81088 81396 . + . ID=Merlin_140_mRNA;Parent=Merlin_140;seqid=Merlin +Merlin GeneMark.hmm exon 81088 81396 . + . ID=Merlin_140_exon;Parent=Merlin_140_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81088 81396 . + 0 ID=Merlin_140_CDS;Parent=Merlin_140_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81381 81527 -178.904000 + . ID=Merlin_141;seqid=Merlin +Merlin GeneMark.hmm mRNA 81381 81527 . + . ID=Merlin_141_mRNA;Parent=Merlin_141;seqid=Merlin +Merlin GeneMark.hmm exon 81381 81527 . + . ID=Merlin_141_exon;Parent=Merlin_141_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81381 81527 . + 0 ID=Merlin_141_CDS;Parent=Merlin_141_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81511 81945 -531.842575 + . ID=Merlin_142;seqid=Merlin +Merlin GeneMark.hmm mRNA 81511 81945 . + . ID=Merlin_142_mRNA;Parent=Merlin_142;seqid=Merlin +Merlin GeneMark.hmm exon 81511 81945 . + . ID=Merlin_142_exon;Parent=Merlin_142_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81511 81945 . + 0 ID=Merlin_142_CDS;Parent=Merlin_142_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81945 82109 -200.193240 + . ID=Merlin_143;seqid=Merlin +Merlin GeneMark.hmm mRNA 81945 82109 . + . ID=Merlin_143_mRNA;Parent=Merlin_143;seqid=Merlin +Merlin GeneMark.hmm exon 81945 82109 . + . ID=Merlin_143_exon;Parent=Merlin_143_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81945 82109 . + 0 ID=Merlin_143_CDS;Parent=Merlin_143_exon;seqid=Merlin +Merlin GeneMark.hmm gene 82145 82618 -597.711728 + . ID=Merlin_144;seqid=Merlin +Merlin GeneMark.hmm mRNA 82145 82618 . + . ID=Merlin_144_mRNA;Parent=Merlin_144;seqid=Merlin +Merlin GeneMark.hmm exon 82145 82618 . + . ID=Merlin_144_exon;Parent=Merlin_144_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 82145 82618 . + 0 ID=Merlin_144_CDS;Parent=Merlin_144_exon;seqid=Merlin +Merlin GeneMark.hmm gene 82615 84444 -2332.730592 + . ID=Merlin_145;seqid=Merlin +Merlin GeneMark.hmm mRNA 82615 84444 . + . ID=Merlin_145_mRNA;Parent=Merlin_145;seqid=Merlin +Merlin GeneMark.hmm exon 82615 84444 . + . ID=Merlin_145_exon;Parent=Merlin_145_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 82615 84444 . + 0 ID=Merlin_145_CDS;Parent=Merlin_145_exon;seqid=Merlin +Merlin GeneMark.hmm gene 84512 84928 -529.993287 + . ID=Merlin_146;seqid=Merlin +Merlin GeneMark.hmm mRNA 84512 84928 . + . ID=Merlin_146_mRNA;Parent=Merlin_146;seqid=Merlin +Merlin GeneMark.hmm exon 84512 84928 . + . ID=Merlin_146_exon;Parent=Merlin_146_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 84512 84928 . + 0 ID=Merlin_146_CDS;Parent=Merlin_146_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85016 85309 -372.795932 + . ID=Merlin_147;seqid=Merlin +Merlin GeneMark.hmm mRNA 85016 85309 . + . ID=Merlin_147_mRNA;Parent=Merlin_147;seqid=Merlin +Merlin GeneMark.hmm exon 85016 85309 . + . ID=Merlin_147_exon;Parent=Merlin_147_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85016 85309 . + 0 ID=Merlin_147_CDS;Parent=Merlin_147_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85459 85722 -330.097448 + . ID=Merlin_148;seqid=Merlin +Merlin GeneMark.hmm mRNA 85459 85722 . + . ID=Merlin_148_mRNA;Parent=Merlin_148;seqid=Merlin +Merlin GeneMark.hmm exon 85459 85722 . + . ID=Merlin_148_exon;Parent=Merlin_148_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85459 85722 . + 0 ID=Merlin_148_CDS;Parent=Merlin_148_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85722 85910 -230.155567 + . ID=Merlin_149;seqid=Merlin +Merlin GeneMark.hmm mRNA 85722 85910 . + . ID=Merlin_149_mRNA;Parent=Merlin_149;seqid=Merlin +Merlin GeneMark.hmm exon 85722 85910 . + . ID=Merlin_149_exon;Parent=Merlin_149_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85722 85910 . + 0 ID=Merlin_149_CDS;Parent=Merlin_149_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85903 86166 -332.190142 + . ID=Merlin_150;seqid=Merlin +Merlin GeneMark.hmm mRNA 85903 86166 . + . ID=Merlin_150_mRNA;Parent=Merlin_150;seqid=Merlin +Merlin GeneMark.hmm exon 85903 86166 . + . ID=Merlin_150_exon;Parent=Merlin_150_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85903 86166 . + 0 ID=Merlin_150_CDS;Parent=Merlin_150_exon;seqid=Merlin +Merlin GeneMark.hmm gene 86229 86555 -399.176919 + . ID=Merlin_151;seqid=Merlin +Merlin GeneMark.hmm mRNA 86229 86555 . + . ID=Merlin_151_mRNA;Parent=Merlin_151;seqid=Merlin +Merlin GeneMark.hmm exon 86229 86555 . + . ID=Merlin_151_exon;Parent=Merlin_151_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 86229 86555 . + 0 ID=Merlin_151_CDS;Parent=Merlin_151_exon;seqid=Merlin +Merlin GeneMark.hmm gene 86552 86833 -365.746982 + . ID=Merlin_152;seqid=Merlin +Merlin GeneMark.hmm mRNA 86552 86833 . + . ID=Merlin_152_mRNA;Parent=Merlin_152;seqid=Merlin +Merlin GeneMark.hmm exon 86552 86833 . + . ID=Merlin_152_exon;Parent=Merlin_152_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 86552 86833 . + 0 ID=Merlin_152_CDS;Parent=Merlin_152_exon;seqid=Merlin +Merlin GeneMark.hmm gene 86826 87074 -314.427851 + . ID=Merlin_153;seqid=Merlin +Merlin GeneMark.hmm mRNA 86826 87074 . + . ID=Merlin_153_mRNA;Parent=Merlin_153;seqid=Merlin +Merlin GeneMark.hmm exon 86826 87074 . + . ID=Merlin_153_exon;Parent=Merlin_153_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 86826 87074 . + 0 ID=Merlin_153_CDS;Parent=Merlin_153_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87067 87291 -270.187122 + . ID=Merlin_154;seqid=Merlin +Merlin GeneMark.hmm mRNA 87067 87291 . + . ID=Merlin_154_mRNA;Parent=Merlin_154;seqid=Merlin +Merlin GeneMark.hmm exon 87067 87291 . + . ID=Merlin_154_exon;Parent=Merlin_154_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87067 87291 . + 0 ID=Merlin_154_CDS;Parent=Merlin_154_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87288 87548 -320.850170 + . ID=Merlin_155;seqid=Merlin +Merlin GeneMark.hmm mRNA 87288 87548 . + . ID=Merlin_155_mRNA;Parent=Merlin_155;seqid=Merlin +Merlin GeneMark.hmm exon 87288 87548 . + . ID=Merlin_155_exon;Parent=Merlin_155_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87288 87548 . + 0 ID=Merlin_155_CDS;Parent=Merlin_155_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87545 87838 -368.941897 + . ID=Merlin_156;seqid=Merlin +Merlin GeneMark.hmm mRNA 87545 87838 . + . ID=Merlin_156_mRNA;Parent=Merlin_156;seqid=Merlin +Merlin GeneMark.hmm exon 87545 87838 . + . ID=Merlin_156_exon;Parent=Merlin_156_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87545 87838 . + 0 ID=Merlin_156_CDS;Parent=Merlin_156_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87906 88445 -686.934268 + . ID=Merlin_157;seqid=Merlin +Merlin GeneMark.hmm mRNA 87906 88445 . + . ID=Merlin_157_mRNA;Parent=Merlin_157;seqid=Merlin +Merlin GeneMark.hmm exon 87906 88445 . + . ID=Merlin_157_exon;Parent=Merlin_157_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87906 88445 . + 0 ID=Merlin_157_CDS;Parent=Merlin_157_exon;seqid=Merlin +Merlin GeneMark.hmm gene 88429 88656 -293.300141 + . ID=Merlin_158;seqid=Merlin +Merlin GeneMark.hmm mRNA 88429 88656 . + . ID=Merlin_158_mRNA;Parent=Merlin_158;seqid=Merlin +Merlin GeneMark.hmm exon 88429 88656 . + . ID=Merlin_158_exon;Parent=Merlin_158_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 88429 88656 . + 0 ID=Merlin_158_CDS;Parent=Merlin_158_exon;seqid=Merlin +Merlin GeneMark.hmm gene 88663 89031 -446.339761 + . ID=Merlin_159;seqid=Merlin +Merlin GeneMark.hmm mRNA 88663 89031 . + . ID=Merlin_159_mRNA;Parent=Merlin_159;seqid=Merlin +Merlin GeneMark.hmm exon 88663 89031 . + . ID=Merlin_159_exon;Parent=Merlin_159_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 88663 89031 . + 0 ID=Merlin_159_CDS;Parent=Merlin_159_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89012 89221 -255.579886 + . ID=Merlin_160;seqid=Merlin +Merlin GeneMark.hmm mRNA 89012 89221 . + . ID=Merlin_160_mRNA;Parent=Merlin_160;seqid=Merlin +Merlin GeneMark.hmm exon 89012 89221 . + . ID=Merlin_160_exon;Parent=Merlin_160_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89012 89221 . + 0 ID=Merlin_160_CDS;Parent=Merlin_160_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89206 89394 -231.007880 + . ID=Merlin_161;seqid=Merlin +Merlin GeneMark.hmm mRNA 89206 89394 . + . ID=Merlin_161_mRNA;Parent=Merlin_161;seqid=Merlin +Merlin GeneMark.hmm exon 89206 89394 . + . ID=Merlin_161_exon;Parent=Merlin_161_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89206 89394 . + 0 ID=Merlin_161_CDS;Parent=Merlin_161_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89426 89764 -419.076718 + . ID=Merlin_162;seqid=Merlin +Merlin GeneMark.hmm mRNA 89426 89764 . + . ID=Merlin_162_mRNA;Parent=Merlin_162;seqid=Merlin +Merlin GeneMark.hmm exon 89426 89764 . + . ID=Merlin_162_exon;Parent=Merlin_162_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89426 89764 . + 0 ID=Merlin_162_CDS;Parent=Merlin_162_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89826 89969 -185.055842 + . ID=Merlin_163;seqid=Merlin +Merlin GeneMark.hmm mRNA 89826 89969 . + . ID=Merlin_163_mRNA;Parent=Merlin_163;seqid=Merlin +Merlin GeneMark.hmm exon 89826 89969 . + . ID=Merlin_163_exon;Parent=Merlin_163_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89826 89969 . + 0 ID=Merlin_163_CDS;Parent=Merlin_163_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89966 90988 -1312.043599 + . ID=Merlin_164;seqid=Merlin +Merlin GeneMark.hmm mRNA 89966 90988 . + . ID=Merlin_164_mRNA;Parent=Merlin_164;seqid=Merlin +Merlin GeneMark.hmm exon 89966 90988 . + . ID=Merlin_164_exon;Parent=Merlin_164_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89966 90988 . + 0 ID=Merlin_164_CDS;Parent=Merlin_164_exon;seqid=Merlin +Merlin GeneMark.hmm gene 90985 91191 -254.724476 + . ID=Merlin_165;seqid=Merlin +Merlin GeneMark.hmm mRNA 90985 91191 . + . ID=Merlin_165_mRNA;Parent=Merlin_165;seqid=Merlin +Merlin GeneMark.hmm exon 90985 91191 . + . ID=Merlin_165_exon;Parent=Merlin_165_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 90985 91191 . + 0 ID=Merlin_165_CDS;Parent=Merlin_165_exon;seqid=Merlin +Merlin GeneMark.hmm gene 91188 92870 -2159.860384 + . ID=Merlin_166;seqid=Merlin +Merlin GeneMark.hmm mRNA 91188 92870 . + . ID=Merlin_166_mRNA;Parent=Merlin_166;seqid=Merlin +Merlin GeneMark.hmm exon 91188 92870 . + . ID=Merlin_166_exon;Parent=Merlin_166_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 91188 92870 . + 0 ID=Merlin_166_CDS;Parent=Merlin_166_exon;seqid=Merlin +Merlin GeneMark.hmm gene 92867 93058 -240.822321 + . ID=Merlin_167;seqid=Merlin +Merlin GeneMark.hmm mRNA 92867 93058 . + . ID=Merlin_167_mRNA;Parent=Merlin_167;seqid=Merlin +Merlin GeneMark.hmm exon 92867 93058 . + . ID=Merlin_167_exon;Parent=Merlin_167_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 92867 93058 . + 0 ID=Merlin_167_CDS;Parent=Merlin_167_exon;seqid=Merlin +Merlin GeneMark.hmm gene 93067 93450 -466.762497 + . ID=Merlin_168;seqid=Merlin +Merlin GeneMark.hmm mRNA 93067 93450 . + . ID=Merlin_168_mRNA;Parent=Merlin_168;seqid=Merlin +Merlin GeneMark.hmm exon 93067 93450 . + . ID=Merlin_168_exon;Parent=Merlin_168_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 93067 93450 . + 0 ID=Merlin_168_CDS;Parent=Merlin_168_exon;seqid=Merlin +Merlin GeneMark.hmm gene 93469 94155 -853.161656 + . ID=Merlin_169;seqid=Merlin +Merlin GeneMark.hmm mRNA 93469 94155 . + . ID=Merlin_169_mRNA;Parent=Merlin_169;seqid=Merlin +Merlin GeneMark.hmm exon 93469 94155 . + . ID=Merlin_169_exon;Parent=Merlin_169_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 93469 94155 . + 0 ID=Merlin_169_CDS;Parent=Merlin_169_exon;seqid=Merlin +Merlin GeneMark.hmm gene 94209 95174 -1219.402057 + . ID=Merlin_170;seqid=Merlin +Merlin GeneMark.hmm mRNA 94209 95174 . + . ID=Merlin_170_mRNA;Parent=Merlin_170;seqid=Merlin +Merlin GeneMark.hmm exon 94209 95174 . + . ID=Merlin_170_exon;Parent=Merlin_170_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 94209 95174 . + 0 ID=Merlin_170_CDS;Parent=Merlin_170_exon;seqid=Merlin +Merlin GeneMark.hmm gene 95174 95737 -724.605488 + . ID=Merlin_171;seqid=Merlin +Merlin GeneMark.hmm mRNA 95174 95737 . + . ID=Merlin_171_mRNA;Parent=Merlin_171;seqid=Merlin +Merlin GeneMark.hmm exon 95174 95737 . + . ID=Merlin_171_exon;Parent=Merlin_171_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 95174 95737 . + 0 ID=Merlin_171_CDS;Parent=Merlin_171_exon;seqid=Merlin +Merlin GeneMark.hmm gene 95731 96108 -464.835446 + . ID=Merlin_172;seqid=Merlin +Merlin GeneMark.hmm mRNA 95731 96108 . + . ID=Merlin_172_mRNA;Parent=Merlin_172;seqid=Merlin +Merlin GeneMark.hmm exon 95731 96108 . + . ID=Merlin_172_exon;Parent=Merlin_172_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 95731 96108 . + 0 ID=Merlin_172_CDS;Parent=Merlin_172_exon;seqid=Merlin +Merlin GeneMark.hmm gene 96110 96331 -276.260456 + . ID=Merlin_173;seqid=Merlin +Merlin GeneMark.hmm mRNA 96110 96331 . + . ID=Merlin_173_mRNA;Parent=Merlin_173;seqid=Merlin +Merlin GeneMark.hmm exon 96110 96331 . + . ID=Merlin_173_exon;Parent=Merlin_173_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 96110 96331 . + 0 ID=Merlin_173_CDS;Parent=Merlin_173_exon;seqid=Merlin +Merlin GeneMark.hmm gene 96426 99116 -3385.938661 + . ID=Merlin_174;seqid=Merlin +Merlin GeneMark.hmm mRNA 96426 99116 . + . ID=Merlin_174_mRNA;Parent=Merlin_174;seqid=Merlin +Merlin GeneMark.hmm exon 96426 99116 . + . ID=Merlin_174_exon;Parent=Merlin_174_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 96426 99116 . + 0 ID=Merlin_174_CDS;Parent=Merlin_174_exon;seqid=Merlin +Merlin GeneMark.hmm gene 99179 99418 -294.745409 + . ID=Merlin_175;seqid=Merlin +Merlin GeneMark.hmm mRNA 99179 99418 . + . ID=Merlin_175_mRNA;Parent=Merlin_175;seqid=Merlin +Merlin GeneMark.hmm exon 99179 99418 . + . ID=Merlin_175_exon;Parent=Merlin_175_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 99179 99418 . + 0 ID=Merlin_175_CDS;Parent=Merlin_175_exon;seqid=Merlin +Merlin GeneMark.hmm gene 99455 99895 -551.164186 + . ID=Merlin_176;seqid=Merlin +Merlin GeneMark.hmm mRNA 99455 99895 . + . ID=Merlin_176_mRNA;Parent=Merlin_176;seqid=Merlin +Merlin GeneMark.hmm exon 99455 99895 . + . ID=Merlin_176_exon;Parent=Merlin_176_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 99455 99895 . + 0 ID=Merlin_176_CDS;Parent=Merlin_176_exon;seqid=Merlin +Merlin GeneMark.hmm gene 99928 100140 -262.065624 + . ID=Merlin_177;seqid=Merlin +Merlin GeneMark.hmm mRNA 99928 100140 . + . ID=Merlin_177_mRNA;Parent=Merlin_177;seqid=Merlin +Merlin GeneMark.hmm exon 99928 100140 . + . ID=Merlin_177_exon;Parent=Merlin_177_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 99928 100140 . + 0 ID=Merlin_177_CDS;Parent=Merlin_177_exon;seqid=Merlin +Merlin GeneMark.hmm gene 100137 100877 -927.530517 + . ID=Merlin_178;seqid=Merlin +Merlin GeneMark.hmm mRNA 100137 100877 . + . ID=Merlin_178_mRNA;Parent=Merlin_178;seqid=Merlin +Merlin GeneMark.hmm exon 100137 100877 . + . ID=Merlin_178_exon;Parent=Merlin_178_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 100137 100877 . + 0 ID=Merlin_178_CDS;Parent=Merlin_178_exon;seqid=Merlin +Merlin GeneMark.hmm gene 100868 101704 -1058.313313 + . ID=Merlin_179;seqid=Merlin +Merlin GeneMark.hmm mRNA 100868 101704 . + . ID=Merlin_179_mRNA;Parent=Merlin_179;seqid=Merlin +Merlin GeneMark.hmm exon 100868 101704 . + . ID=Merlin_179_exon;Parent=Merlin_179_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 100868 101704 . + 0 ID=Merlin_179_CDS;Parent=Merlin_179_exon;seqid=Merlin +Merlin GeneMark.hmm gene 101701 102777 -1345.602625 + . ID=Merlin_180;seqid=Merlin +Merlin GeneMark.hmm mRNA 101701 102777 . + . ID=Merlin_180_mRNA;Parent=Merlin_180;seqid=Merlin +Merlin GeneMark.hmm exon 101701 102777 . + . ID=Merlin_180_exon;Parent=Merlin_180_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 101701 102777 . + 0 ID=Merlin_180_CDS;Parent=Merlin_180_exon;seqid=Merlin +Merlin GeneMark.hmm gene 102885 104072 -1483.608352 + . ID=Merlin_181;seqid=Merlin +Merlin GeneMark.hmm mRNA 102885 104072 . + . ID=Merlin_181_mRNA;Parent=Merlin_181;seqid=Merlin +Merlin GeneMark.hmm exon 102885 104072 . + . ID=Merlin_181_exon;Parent=Merlin_181_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 102885 104072 . + 0 ID=Merlin_181_CDS;Parent=Merlin_181_exon;seqid=Merlin +Merlin GeneMark.hmm gene 104072 104422 -451.869493 + . ID=Merlin_182;seqid=Merlin +Merlin GeneMark.hmm mRNA 104072 104422 . + . ID=Merlin_182_mRNA;Parent=Merlin_182;seqid=Merlin +Merlin GeneMark.hmm exon 104072 104422 . + . ID=Merlin_182_exon;Parent=Merlin_182_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 104072 104422 . + 0 ID=Merlin_182_CDS;Parent=Merlin_182_exon;seqid=Merlin +Merlin GeneMark.hmm gene 104500 105867 -1730.587045 + . ID=Merlin_183;seqid=Merlin +Merlin GeneMark.hmm mRNA 104500 105867 . + . ID=Merlin_183_mRNA;Parent=Merlin_183;seqid=Merlin +Merlin GeneMark.hmm exon 104500 105867 . + . ID=Merlin_183_exon;Parent=Merlin_183_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 104500 105867 . + 0 ID=Merlin_183_CDS;Parent=Merlin_183_exon;seqid=Merlin +Merlin GeneMark.hmm gene 105928 106209 -352.988779 + . ID=Merlin_184;seqid=Merlin +Merlin GeneMark.hmm mRNA 105928 106209 . + . ID=Merlin_184_mRNA;Parent=Merlin_184;seqid=Merlin +Merlin GeneMark.hmm exon 105928 106209 . + . ID=Merlin_184_exon;Parent=Merlin_184_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 105928 106209 . + 0 ID=Merlin_184_CDS;Parent=Merlin_184_exon;seqid=Merlin +Merlin GeneMark.hmm gene 106209 106487 -351.122469 + . ID=Merlin_185;seqid=Merlin +Merlin GeneMark.hmm mRNA 106209 106487 . + . ID=Merlin_185_mRNA;Parent=Merlin_185;seqid=Merlin +Merlin GeneMark.hmm exon 106209 106487 . + . ID=Merlin_185_exon;Parent=Merlin_185_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 106209 106487 . + 0 ID=Merlin_185_CDS;Parent=Merlin_185_exon;seqid=Merlin +Merlin GeneMark.hmm gene 106487 106684 -246.970187 + . ID=Merlin_186;seqid=Merlin +Merlin GeneMark.hmm mRNA 106487 106684 . + . ID=Merlin_186_mRNA;Parent=Merlin_186;seqid=Merlin +Merlin GeneMark.hmm exon 106487 106684 . + . ID=Merlin_186_exon;Parent=Merlin_186_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 106487 106684 . + 0 ID=Merlin_186_CDS;Parent=Merlin_186_exon;seqid=Merlin +Merlin GeneMark.hmm gene 106699 107163 -615.053890 + . ID=Merlin_187;seqid=Merlin +Merlin GeneMark.hmm mRNA 106699 107163 . + . ID=Merlin_187_mRNA;Parent=Merlin_187;seqid=Merlin +Merlin GeneMark.hmm exon 106699 107163 . + . ID=Merlin_187_exon;Parent=Merlin_187_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 106699 107163 . + 0 ID=Merlin_187_CDS;Parent=Merlin_187_exon;seqid=Merlin +Merlin GeneMark.hmm gene 107200 108225 -1324.566436 + . ID=Merlin_188;seqid=Merlin +Merlin GeneMark.hmm mRNA 107200 108225 . + . ID=Merlin_188_mRNA;Parent=Merlin_188;seqid=Merlin +Merlin GeneMark.hmm exon 107200 108225 . + . ID=Merlin_188_exon;Parent=Merlin_188_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 107200 108225 . + 0 ID=Merlin_188_CDS;Parent=Merlin_188_exon;seqid=Merlin +Merlin GeneMark.hmm gene 108222 108419 -244.299886 - . ID=Merlin_189;seqid=Merlin +Merlin GeneMark.hmm mRNA 108222 108419 . - . ID=Merlin_189_mRNA;Parent=Merlin_189;seqid=Merlin +Merlin GeneMark.hmm exon 108222 108419 . - . ID=Merlin_189_exon;Parent=Merlin_189_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 108222 108419 . - 0 ID=Merlin_189_CDS;Parent=Merlin_189_exon;seqid=Merlin +Merlin GeneMark.hmm gene 108443 108727 -361.722638 + . ID=Merlin_190;seqid=Merlin +Merlin GeneMark.hmm mRNA 108443 108727 . + . ID=Merlin_190_mRNA;Parent=Merlin_190;seqid=Merlin +Merlin GeneMark.hmm exon 108443 108727 . + . ID=Merlin_190_exon;Parent=Merlin_190_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 108443 108727 . + 0 ID=Merlin_190_CDS;Parent=Merlin_190_exon;seqid=Merlin +Merlin GeneMark.hmm gene 108746 109267 -660.122856 + . ID=Merlin_191;seqid=Merlin +Merlin GeneMark.hmm mRNA 108746 109267 . + . ID=Merlin_191_mRNA;Parent=Merlin_191;seqid=Merlin +Merlin GeneMark.hmm exon 108746 109267 . + . ID=Merlin_191_exon;Parent=Merlin_191_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 108746 109267 . + 0 ID=Merlin_191_CDS;Parent=Merlin_191_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109283 109450 -207.369336 + . ID=Merlin_192;seqid=Merlin +Merlin GeneMark.hmm mRNA 109283 109450 . + . ID=Merlin_192_mRNA;Parent=Merlin_192;seqid=Merlin +Merlin GeneMark.hmm exon 109283 109450 . + . ID=Merlin_192_exon;Parent=Merlin_192_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109283 109450 . + 0 ID=Merlin_192_CDS;Parent=Merlin_192_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109463 109684 -282.485263 + . ID=Merlin_193;seqid=Merlin +Merlin GeneMark.hmm mRNA 109463 109684 . + . ID=Merlin_193_mRNA;Parent=Merlin_193;seqid=Merlin +Merlin GeneMark.hmm exon 109463 109684 . + . ID=Merlin_193_exon;Parent=Merlin_193_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109463 109684 . + 0 ID=Merlin_193_CDS;Parent=Merlin_193_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109681 109833 -188.437796 + . ID=Merlin_194;seqid=Merlin +Merlin GeneMark.hmm mRNA 109681 109833 . + . ID=Merlin_194_mRNA;Parent=Merlin_194;seqid=Merlin +Merlin GeneMark.hmm exon 109681 109833 . + . ID=Merlin_194_exon;Parent=Merlin_194_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109681 109833 . + 0 ID=Merlin_194_CDS;Parent=Merlin_194_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109868 110107 -300.363740 + . ID=Merlin_195;seqid=Merlin +Merlin GeneMark.hmm mRNA 109868 110107 . + . ID=Merlin_195_mRNA;Parent=Merlin_195;seqid=Merlin +Merlin GeneMark.hmm exon 109868 110107 . + . ID=Merlin_195_exon;Parent=Merlin_195_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109868 110107 . + 0 ID=Merlin_195_CDS;Parent=Merlin_195_exon;seqid=Merlin +Merlin GeneMark.hmm gene 110187 110387 -242.566720 + . ID=Merlin_196;seqid=Merlin +Merlin GeneMark.hmm mRNA 110187 110387 . + . ID=Merlin_196_mRNA;Parent=Merlin_196;seqid=Merlin +Merlin GeneMark.hmm exon 110187 110387 . + . ID=Merlin_196_exon;Parent=Merlin_196_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 110187 110387 . + 0 ID=Merlin_196_CDS;Parent=Merlin_196_exon;seqid=Merlin +Merlin GeneMark.hmm gene 110384 110623 -295.174485 + . ID=Merlin_197;seqid=Merlin +Merlin GeneMark.hmm mRNA 110384 110623 . + . ID=Merlin_197_mRNA;Parent=Merlin_197;seqid=Merlin +Merlin GeneMark.hmm exon 110384 110623 . + . ID=Merlin_197_exon;Parent=Merlin_197_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 110384 110623 . + 0 ID=Merlin_197_CDS;Parent=Merlin_197_exon;seqid=Merlin +Merlin GeneMark.hmm gene 110620 111051 -544.978023 + . ID=Merlin_198;seqid=Merlin +Merlin GeneMark.hmm mRNA 110620 111051 . + . ID=Merlin_198_mRNA;Parent=Merlin_198;seqid=Merlin +Merlin GeneMark.hmm exon 110620 111051 . + . ID=Merlin_198_exon;Parent=Merlin_198_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 110620 111051 . + 0 ID=Merlin_198_CDS;Parent=Merlin_198_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111101 111238 -161.794612 + . ID=Merlin_199;seqid=Merlin +Merlin GeneMark.hmm mRNA 111101 111238 . + . ID=Merlin_199_mRNA;Parent=Merlin_199;seqid=Merlin +Merlin GeneMark.hmm exon 111101 111238 . + . ID=Merlin_199_exon;Parent=Merlin_199_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111101 111238 . + 0 ID=Merlin_199_CDS;Parent=Merlin_199_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111213 111737 -670.599096 + . ID=Merlin_200;seqid=Merlin +Merlin GeneMark.hmm mRNA 111213 111737 . + . ID=Merlin_200_mRNA;Parent=Merlin_200;seqid=Merlin +Merlin GeneMark.hmm exon 111213 111737 . + . ID=Merlin_200_exon;Parent=Merlin_200_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111213 111737 . + 0 ID=Merlin_200_CDS;Parent=Merlin_200_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111737 111913 -223.231704 + . ID=Merlin_201;seqid=Merlin +Merlin GeneMark.hmm mRNA 111737 111913 . + . ID=Merlin_201_mRNA;Parent=Merlin_201;seqid=Merlin +Merlin GeneMark.hmm exon 111737 111913 . + . ID=Merlin_201_exon;Parent=Merlin_201_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111737 111913 . + 0 ID=Merlin_201_CDS;Parent=Merlin_201_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111973 112590 -802.696887 + . ID=Merlin_202;seqid=Merlin +Merlin GeneMark.hmm mRNA 111973 112590 . + . ID=Merlin_202_mRNA;Parent=Merlin_202;seqid=Merlin +Merlin GeneMark.hmm exon 111973 112590 . + . ID=Merlin_202_exon;Parent=Merlin_202_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111973 112590 . + 0 ID=Merlin_202_CDS;Parent=Merlin_202_exon;seqid=Merlin +Merlin GeneMark.hmm gene 112676 113461 -994.252012 + . ID=Merlin_203;seqid=Merlin +Merlin GeneMark.hmm mRNA 112676 113461 . + . ID=Merlin_203_mRNA;Parent=Merlin_203;seqid=Merlin +Merlin GeneMark.hmm exon 112676 113461 . + . ID=Merlin_203_exon;Parent=Merlin_203_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 112676 113461 . + 0 ID=Merlin_203_CDS;Parent=Merlin_203_exon;seqid=Merlin +Merlin GeneMark.hmm gene 113461 113778 -389.300206 + . ID=Merlin_204;seqid=Merlin +Merlin GeneMark.hmm mRNA 113461 113778 . + . ID=Merlin_204_mRNA;Parent=Merlin_204;seqid=Merlin +Merlin GeneMark.hmm exon 113461 113778 . + . ID=Merlin_204_exon;Parent=Merlin_204_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 113461 113778 . + 0 ID=Merlin_204_CDS;Parent=Merlin_204_exon;seqid=Merlin +Merlin GeneMark.hmm gene 113787 115118 -1697.881894 + . ID=Merlin_205;seqid=Merlin +Merlin GeneMark.hmm mRNA 113787 115118 . + . ID=Merlin_205_mRNA;Parent=Merlin_205;seqid=Merlin +Merlin GeneMark.hmm exon 113787 115118 . + . ID=Merlin_205_exon;Parent=Merlin_205_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 113787 115118 . + 0 ID=Merlin_205_CDS;Parent=Merlin_205_exon;seqid=Merlin +Merlin GeneMark.hmm gene 115125 115355 -279.940476 + . ID=Merlin_206;seqid=Merlin +Merlin GeneMark.hmm mRNA 115125 115355 . + . ID=Merlin_206_mRNA;Parent=Merlin_206;seqid=Merlin +Merlin GeneMark.hmm exon 115125 115355 . + . ID=Merlin_206_exon;Parent=Merlin_206_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 115125 115355 . + 0 ID=Merlin_206_CDS;Parent=Merlin_206_exon;seqid=Merlin +Merlin GeneMark.hmm gene 115346 116038 -870.417189 + . ID=Merlin_207;seqid=Merlin +Merlin GeneMark.hmm mRNA 115346 116038 . + . ID=Merlin_207_mRNA;Parent=Merlin_207;seqid=Merlin +Merlin GeneMark.hmm exon 115346 116038 . + . ID=Merlin_207_exon;Parent=Merlin_207_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 115346 116038 . + 0 ID=Merlin_207_CDS;Parent=Merlin_207_exon;seqid=Merlin +Merlin GeneMark.hmm gene 116040 116453 -527.653367 + . ID=Merlin_208;seqid=Merlin +Merlin GeneMark.hmm mRNA 116040 116453 . + . ID=Merlin_208_mRNA;Parent=Merlin_208;seqid=Merlin +Merlin GeneMark.hmm exon 116040 116453 . + . ID=Merlin_208_exon;Parent=Merlin_208_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 116040 116453 . + 0 ID=Merlin_208_CDS;Parent=Merlin_208_exon;seqid=Merlin +Merlin GeneMark.hmm gene 116520 116714 -243.312871 + . ID=Merlin_209;seqid=Merlin +Merlin GeneMark.hmm mRNA 116520 116714 . + . ID=Merlin_209_mRNA;Parent=Merlin_209;seqid=Merlin +Merlin GeneMark.hmm exon 116520 116714 . + . ID=Merlin_209_exon;Parent=Merlin_209_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 116520 116714 . + 0 ID=Merlin_209_CDS;Parent=Merlin_209_exon;seqid=Merlin +Merlin GeneMark.hmm gene 116714 117190 -587.212745 + . ID=Merlin_210;seqid=Merlin +Merlin GeneMark.hmm mRNA 116714 117190 . + . ID=Merlin_210_mRNA;Parent=Merlin_210;seqid=Merlin +Merlin GeneMark.hmm exon 116714 117190 . + . ID=Merlin_210_exon;Parent=Merlin_210_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 116714 117190 . + 0 ID=Merlin_210_CDS;Parent=Merlin_210_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117177 117371 -246.741774 + . ID=Merlin_211;seqid=Merlin +Merlin GeneMark.hmm mRNA 117177 117371 . + . ID=Merlin_211_mRNA;Parent=Merlin_211;seqid=Merlin +Merlin GeneMark.hmm exon 117177 117371 . + . ID=Merlin_211_exon;Parent=Merlin_211_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117177 117371 . + 0 ID=Merlin_211_CDS;Parent=Merlin_211_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117368 117844 -587.223837 + . ID=Merlin_212;seqid=Merlin +Merlin GeneMark.hmm mRNA 117368 117844 . + . ID=Merlin_212_mRNA;Parent=Merlin_212;seqid=Merlin +Merlin GeneMark.hmm exon 117368 117844 . + . ID=Merlin_212_exon;Parent=Merlin_212_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117368 117844 . + 0 ID=Merlin_212_CDS;Parent=Merlin_212_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117841 117939 -117.153787 + . ID=Merlin_213;seqid=Merlin +Merlin GeneMark.hmm mRNA 117841 117939 . + . ID=Merlin_213_mRNA;Parent=Merlin_213;seqid=Merlin +Merlin GeneMark.hmm exon 117841 117939 . + . ID=Merlin_213_exon;Parent=Merlin_213_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117841 117939 . + 0 ID=Merlin_213_CDS;Parent=Merlin_213_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117936 118187 -314.341261 + . ID=Merlin_214;seqid=Merlin +Merlin GeneMark.hmm mRNA 117936 118187 . + . ID=Merlin_214_mRNA;Parent=Merlin_214;seqid=Merlin +Merlin GeneMark.hmm exon 117936 118187 . + . ID=Merlin_214_exon;Parent=Merlin_214_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117936 118187 . + 0 ID=Merlin_214_CDS;Parent=Merlin_214_exon;seqid=Merlin +Merlin GeneMark.hmm gene 118184 118411 -293.015141 + . ID=Merlin_215;seqid=Merlin +Merlin GeneMark.hmm mRNA 118184 118411 . + . ID=Merlin_215_mRNA;Parent=Merlin_215;seqid=Merlin +Merlin GeneMark.hmm exon 118184 118411 . + . ID=Merlin_215_exon;Parent=Merlin_215_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 118184 118411 . + 0 ID=Merlin_215_CDS;Parent=Merlin_215_exon;seqid=Merlin +Merlin GeneMark.hmm gene 118435 118818 -477.204459 + . ID=Merlin_216;seqid=Merlin +Merlin GeneMark.hmm mRNA 118435 118818 . + . ID=Merlin_216_mRNA;Parent=Merlin_216;seqid=Merlin +Merlin GeneMark.hmm exon 118435 118818 . + . ID=Merlin_216_exon;Parent=Merlin_216_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 118435 118818 . + 0 ID=Merlin_216_CDS;Parent=Merlin_216_exon;seqid=Merlin +Merlin GeneMark.hmm gene 118849 120690 -2259.486004 + . ID=Merlin_217;seqid=Merlin +Merlin GeneMark.hmm mRNA 118849 120690 . + . ID=Merlin_217_mRNA;Parent=Merlin_217;seqid=Merlin +Merlin GeneMark.hmm exon 118849 120690 . + . ID=Merlin_217_exon;Parent=Merlin_217_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 118849 120690 . + 0 ID=Merlin_217_CDS;Parent=Merlin_217_exon;seqid=Merlin +Merlin GeneMark.hmm gene 120730 120885 -200.778885 + . ID=Merlin_218;seqid=Merlin +Merlin GeneMark.hmm mRNA 120730 120885 . + . ID=Merlin_218_mRNA;Parent=Merlin_218;seqid=Merlin +Merlin GeneMark.hmm exon 120730 120885 . + . ID=Merlin_218_exon;Parent=Merlin_218_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 120730 120885 . + 0 ID=Merlin_218_CDS;Parent=Merlin_218_exon;seqid=Merlin +Merlin GeneMark.hmm gene 120929 121213 -363.032822 + . ID=Merlin_219;seqid=Merlin +Merlin GeneMark.hmm mRNA 120929 121213 . + . ID=Merlin_219_mRNA;Parent=Merlin_219;seqid=Merlin +Merlin GeneMark.hmm exon 120929 121213 . + . ID=Merlin_219_exon;Parent=Merlin_219_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 120929 121213 . + 0 ID=Merlin_219_CDS;Parent=Merlin_219_exon;seqid=Merlin +Merlin GeneMark.hmm gene 121200 121400 -244.392369 + . ID=Merlin_220;seqid=Merlin +Merlin GeneMark.hmm mRNA 121200 121400 . + . ID=Merlin_220_mRNA;Parent=Merlin_220;seqid=Merlin +Merlin GeneMark.hmm exon 121200 121400 . + . ID=Merlin_220_exon;Parent=Merlin_220_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 121200 121400 . + 0 ID=Merlin_220_CDS;Parent=Merlin_220_exon;seqid=Merlin +Merlin GeneMark.hmm gene 121411 123588 -2750.112191 + . ID=Merlin_221;seqid=Merlin +Merlin GeneMark.hmm mRNA 121411 123588 . + . ID=Merlin_221_mRNA;Parent=Merlin_221;seqid=Merlin +Merlin GeneMark.hmm exon 121411 123588 . + . ID=Merlin_221_exon;Parent=Merlin_221_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 121411 123588 . + 0 ID=Merlin_221_CDS;Parent=Merlin_221_exon;seqid=Merlin +Merlin GeneMark.hmm gene 123598 124494 -1129.990261 + . ID=Merlin_222;seqid=Merlin +Merlin GeneMark.hmm mRNA 123598 124494 . + . ID=Merlin_222_mRNA;Parent=Merlin_222;seqid=Merlin +Merlin GeneMark.hmm exon 123598 124494 . + . ID=Merlin_222_exon;Parent=Merlin_222_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 123598 124494 . + 0 ID=Merlin_222_CDS;Parent=Merlin_222_exon;seqid=Merlin +Merlin GeneMark.hmm gene 124494 124691 -244.507612 + . ID=Merlin_223;seqid=Merlin +Merlin GeneMark.hmm mRNA 124494 124691 . + . ID=Merlin_223_mRNA;Parent=Merlin_223;seqid=Merlin +Merlin GeneMark.hmm exon 124494 124691 . + . ID=Merlin_223_exon;Parent=Merlin_223_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 124494 124691 . + 0 ID=Merlin_223_CDS;Parent=Merlin_223_exon;seqid=Merlin +Merlin GeneMark.hmm gene 124727 125047 -399.871946 + . ID=Merlin_224;seqid=Merlin +Merlin GeneMark.hmm mRNA 124727 125047 . + . ID=Merlin_224_mRNA;Parent=Merlin_224;seqid=Merlin +Merlin GeneMark.hmm exon 124727 125047 . + . ID=Merlin_224_exon;Parent=Merlin_224_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 124727 125047 . + 0 ID=Merlin_224_CDS;Parent=Merlin_224_exon;seqid=Merlin +Merlin GeneMark.hmm gene 125097 125537 -571.759726 + . ID=Merlin_225;seqid=Merlin +Merlin GeneMark.hmm mRNA 125097 125537 . + . ID=Merlin_225_mRNA;Parent=Merlin_225;seqid=Merlin +Merlin GeneMark.hmm exon 125097 125537 . + . ID=Merlin_225_exon;Parent=Merlin_225_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 125097 125537 . + 0 ID=Merlin_225_CDS;Parent=Merlin_225_exon;seqid=Merlin +Merlin GeneMark.hmm gene 125606 125851 -292.219635 + . ID=Merlin_226;seqid=Merlin +Merlin GeneMark.hmm mRNA 125606 125851 . + . ID=Merlin_226_mRNA;Parent=Merlin_226;seqid=Merlin +Merlin GeneMark.hmm exon 125606 125851 . + . ID=Merlin_226_exon;Parent=Merlin_226_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 125606 125851 . + 0 ID=Merlin_226_CDS;Parent=Merlin_226_exon;seqid=Merlin +Merlin GeneMark.hmm gene 125848 126039 -240.766275 + . ID=Merlin_227;seqid=Merlin +Merlin GeneMark.hmm mRNA 125848 126039 . + . ID=Merlin_227_mRNA;Parent=Merlin_227;seqid=Merlin +Merlin GeneMark.hmm exon 125848 126039 . + . ID=Merlin_227_exon;Parent=Merlin_227_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 125848 126039 . + 0 ID=Merlin_227_CDS;Parent=Merlin_227_exon;seqid=Merlin +Merlin GeneMark.hmm gene 126096 126536 -555.654560 + . ID=Merlin_228;seqid=Merlin +Merlin GeneMark.hmm mRNA 126096 126536 . + . ID=Merlin_228_mRNA;Parent=Merlin_228;seqid=Merlin +Merlin GeneMark.hmm exon 126096 126536 . + . ID=Merlin_228_exon;Parent=Merlin_228_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 126096 126536 . + 0 ID=Merlin_228_CDS;Parent=Merlin_228_exon;seqid=Merlin +Merlin GeneMark.hmm gene 126843 126980 -167.572589 + . ID=Merlin_229;seqid=Merlin +Merlin GeneMark.hmm mRNA 126843 126980 . + . ID=Merlin_229_mRNA;Parent=Merlin_229;seqid=Merlin +Merlin GeneMark.hmm exon 126843 126980 . + . ID=Merlin_229_exon;Parent=Merlin_229_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 126843 126980 . + 0 ID=Merlin_229_CDS;Parent=Merlin_229_exon;seqid=Merlin +Merlin GeneMark.hmm gene 126985 128322 -1655.641432 + . ID=Merlin_230;seqid=Merlin +Merlin GeneMark.hmm mRNA 126985 128322 . + . ID=Merlin_230_mRNA;Parent=Merlin_230;seqid=Merlin +Merlin GeneMark.hmm exon 126985 128322 . + . ID=Merlin_230_exon;Parent=Merlin_230_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 126985 128322 . + 0 ID=Merlin_230_CDS;Parent=Merlin_230_exon;seqid=Merlin +Merlin GeneMark.hmm gene 128313 128453 -176.429391 + . ID=Merlin_231;seqid=Merlin +Merlin GeneMark.hmm mRNA 128313 128453 . + . ID=Merlin_231_mRNA;Parent=Merlin_231;seqid=Merlin +Merlin GeneMark.hmm exon 128313 128453 . + . ID=Merlin_231_exon;Parent=Merlin_231_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 128313 128453 . + 0 ID=Merlin_231_CDS;Parent=Merlin_231_exon;seqid=Merlin +Merlin GeneMark.hmm gene 128634 128867 -280.339767 + . ID=Merlin_232;seqid=Merlin +Merlin GeneMark.hmm mRNA 128634 128867 . + . ID=Merlin_232_mRNA;Parent=Merlin_232;seqid=Merlin +Merlin GeneMark.hmm exon 128634 128867 . + . ID=Merlin_232_exon;Parent=Merlin_232_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 128634 128867 . + 0 ID=Merlin_232_CDS;Parent=Merlin_232_exon;seqid=Merlin +Merlin GeneMark.hmm gene 128931 129194 -323.191370 + . ID=Merlin_233;seqid=Merlin +Merlin GeneMark.hmm mRNA 128931 129194 . + . ID=Merlin_233_mRNA;Parent=Merlin_233;seqid=Merlin +Merlin GeneMark.hmm exon 128931 129194 . + . ID=Merlin_233_exon;Parent=Merlin_233_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 128931 129194 . + 0 ID=Merlin_233_CDS;Parent=Merlin_233_exon;seqid=Merlin +Merlin GeneMark.hmm gene 129202 129471 -345.520317 + . ID=Merlin_234;seqid=Merlin +Merlin GeneMark.hmm mRNA 129202 129471 . + . ID=Merlin_234_mRNA;Parent=Merlin_234;seqid=Merlin +Merlin GeneMark.hmm exon 129202 129471 . + . ID=Merlin_234_exon;Parent=Merlin_234_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 129202 129471 . + 0 ID=Merlin_234_CDS;Parent=Merlin_234_exon;seqid=Merlin +Merlin GeneMark.hmm gene 129581 130225 -789.527965 + . ID=Merlin_235;seqid=Merlin +Merlin GeneMark.hmm mRNA 129581 130225 . + . ID=Merlin_235_mRNA;Parent=Merlin_235;seqid=Merlin +Merlin GeneMark.hmm exon 129581 130225 . + . ID=Merlin_235_exon;Parent=Merlin_235_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 129581 130225 . + 0 ID=Merlin_235_CDS;Parent=Merlin_235_exon;seqid=Merlin +Merlin GeneMark.hmm gene 130236 130643 -513.741632 + . ID=Merlin_236;seqid=Merlin +Merlin GeneMark.hmm mRNA 130236 130643 . + . ID=Merlin_236_mRNA;Parent=Merlin_236;seqid=Merlin +Merlin GeneMark.hmm exon 130236 130643 . + . ID=Merlin_236_exon;Parent=Merlin_236_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 130236 130643 . + 0 ID=Merlin_236_CDS;Parent=Merlin_236_exon;seqid=Merlin +Merlin GeneMark.hmm gene 130640 131017 -476.781736 + . ID=Merlin_237;seqid=Merlin +Merlin GeneMark.hmm mRNA 130640 131017 . + . ID=Merlin_237_mRNA;Parent=Merlin_237;seqid=Merlin +Merlin GeneMark.hmm exon 130640 131017 . + . ID=Merlin_237_exon;Parent=Merlin_237_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 130640 131017 . + 0 ID=Merlin_237_CDS;Parent=Merlin_237_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131017 131289 -326.061964 + . ID=Merlin_238;seqid=Merlin +Merlin GeneMark.hmm mRNA 131017 131289 . + . ID=Merlin_238_mRNA;Parent=Merlin_238;seqid=Merlin +Merlin GeneMark.hmm exon 131017 131289 . + . ID=Merlin_238_exon;Parent=Merlin_238_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131017 131289 . + 0 ID=Merlin_238_CDS;Parent=Merlin_238_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131289 131597 -389.454269 + . ID=Merlin_239;seqid=Merlin +Merlin GeneMark.hmm mRNA 131289 131597 . + . ID=Merlin_239_mRNA;Parent=Merlin_239;seqid=Merlin +Merlin GeneMark.hmm exon 131289 131597 . + . ID=Merlin_239_exon;Parent=Merlin_239_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131289 131597 . + 0 ID=Merlin_239_CDS;Parent=Merlin_239_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131569 131781 -264.904995 + . ID=Merlin_240;seqid=Merlin +Merlin GeneMark.hmm mRNA 131569 131781 . + . ID=Merlin_240_mRNA;Parent=Merlin_240;seqid=Merlin +Merlin GeneMark.hmm exon 131569 131781 . + . ID=Merlin_240_exon;Parent=Merlin_240_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131569 131781 . + 0 ID=Merlin_240_CDS;Parent=Merlin_240_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131778 132191 -541.018164 + . ID=Merlin_241;seqid=Merlin +Merlin GeneMark.hmm mRNA 131778 132191 . + . ID=Merlin_241_mRNA;Parent=Merlin_241;seqid=Merlin +Merlin GeneMark.hmm exon 131778 132191 . + . ID=Merlin_241_exon;Parent=Merlin_241_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131778 132191 . + 0 ID=Merlin_241_CDS;Parent=Merlin_241_exon;seqid=Merlin +Merlin GeneMark.hmm gene 132199 132585 -491.258919 + . ID=Merlin_242;seqid=Merlin +Merlin GeneMark.hmm mRNA 132199 132585 . + . ID=Merlin_242_mRNA;Parent=Merlin_242;seqid=Merlin +Merlin GeneMark.hmm exon 132199 132585 . + . ID=Merlin_242_exon;Parent=Merlin_242_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 132199 132585 . + 0 ID=Merlin_242_CDS;Parent=Merlin_242_exon;seqid=Merlin +Merlin GeneMark.hmm gene 132575 132847 -349.509326 + . ID=Merlin_243;seqid=Merlin +Merlin GeneMark.hmm mRNA 132575 132847 . + . ID=Merlin_243_mRNA;Parent=Merlin_243;seqid=Merlin +Merlin GeneMark.hmm exon 132575 132847 . + . ID=Merlin_243_exon;Parent=Merlin_243_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 132575 132847 . + 0 ID=Merlin_243_CDS;Parent=Merlin_243_exon;seqid=Merlin +Merlin GeneMark.hmm gene 132910 133182 -334.452325 + . ID=Merlin_244;seqid=Merlin +Merlin GeneMark.hmm mRNA 132910 133182 . + . ID=Merlin_244_mRNA;Parent=Merlin_244;seqid=Merlin +Merlin GeneMark.hmm exon 132910 133182 . + . ID=Merlin_244_exon;Parent=Merlin_244_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 132910 133182 . + 0 ID=Merlin_244_CDS;Parent=Merlin_244_exon;seqid=Merlin +Merlin GeneMark.hmm gene 133179 133835 -859.997228 - . ID=Merlin_245;seqid=Merlin +Merlin GeneMark.hmm mRNA 133179 133835 . - . ID=Merlin_245_mRNA;Parent=Merlin_245;seqid=Merlin +Merlin GeneMark.hmm exon 133179 133835 . - . ID=Merlin_245_exon;Parent=Merlin_245_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 133179 133835 . - 0 ID=Merlin_245_CDS;Parent=Merlin_245_exon;seqid=Merlin +Merlin GeneMark.hmm gene 133857 134663 -1049.900868 - . ID=Merlin_246;seqid=Merlin +Merlin GeneMark.hmm mRNA 133857 134663 . - . ID=Merlin_246_mRNA;Parent=Merlin_246;seqid=Merlin +Merlin GeneMark.hmm exon 133857 134663 . - . ID=Merlin_246_exon;Parent=Merlin_246_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 133857 134663 . - 0 ID=Merlin_246_CDS;Parent=Merlin_246_exon;seqid=Merlin +Merlin GeneMark.hmm gene 134693 137068 -3033.417419 - . ID=Merlin_247;seqid=Merlin +Merlin GeneMark.hmm mRNA 134693 137068 . - . ID=Merlin_247_mRNA;Parent=Merlin_247;seqid=Merlin +Merlin GeneMark.hmm exon 134693 137068 . - . ID=Merlin_247_exon;Parent=Merlin_247_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 134693 137068 . - 0 ID=Merlin_247_CDS;Parent=Merlin_247_exon;seqid=Merlin +Merlin GeneMark.hmm gene 137075 137734 -856.122084 - . ID=Merlin_248;seqid=Merlin +Merlin GeneMark.hmm mRNA 137075 137734 . - . ID=Merlin_248_mRNA;Parent=Merlin_248;seqid=Merlin +Merlin GeneMark.hmm exon 137075 137734 . - . ID=Merlin_248_exon;Parent=Merlin_248_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 137075 137734 . - 0 ID=Merlin_248_CDS;Parent=Merlin_248_exon;seqid=Merlin +Merlin GeneMark.hmm gene 137787 138962 -1500.330086 - . ID=Merlin_249;seqid=Merlin +Merlin GeneMark.hmm mRNA 137787 138962 . - . ID=Merlin_249_mRNA;Parent=Merlin_249;seqid=Merlin +Merlin GeneMark.hmm exon 137787 138962 . - . ID=Merlin_249_exon;Parent=Merlin_249_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 137787 138962 . - 0 ID=Merlin_249_CDS;Parent=Merlin_249_exon;seqid=Merlin +Merlin GeneMark.hmm gene 138962 142759 -4791.853068 - . ID=Merlin_250;seqid=Merlin +Merlin GeneMark.hmm mRNA 138962 142759 . - . ID=Merlin_250_mRNA;Parent=Merlin_250;seqid=Merlin +Merlin GeneMark.hmm exon 138962 142759 . - . ID=Merlin_250_exon;Parent=Merlin_250_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 138962 142759 . - 0 ID=Merlin_250_CDS;Parent=Merlin_250_exon;seqid=Merlin +Merlin GeneMark.hmm gene 142827 143753 -1151.813807 + . ID=Merlin_251;seqid=Merlin +Merlin GeneMark.hmm mRNA 142827 143753 . + . ID=Merlin_251_mRNA;Parent=Merlin_251;seqid=Merlin +Merlin GeneMark.hmm exon 142827 143753 . + . ID=Merlin_251_exon;Parent=Merlin_251_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 142827 143753 . + 0 ID=Merlin_251_CDS;Parent=Merlin_251_exon;seqid=Merlin +Merlin GeneMark.hmm gene 143743 144030 -331.847936 + . ID=Merlin_252;seqid=Merlin +Merlin GeneMark.hmm mRNA 143743 144030 . + . ID=Merlin_252_mRNA;Parent=Merlin_252;seqid=Merlin +Merlin GeneMark.hmm exon 143743 144030 . + . ID=Merlin_252_exon;Parent=Merlin_252_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 143743 144030 . + 0 ID=Merlin_252_CDS;Parent=Merlin_252_exon;seqid=Merlin +Merlin GeneMark.hmm gene 144008 144304 -369.866491 + . ID=Merlin_253;seqid=Merlin +Merlin GeneMark.hmm mRNA 144008 144304 . + . ID=Merlin_253_mRNA;Parent=Merlin_253;seqid=Merlin +Merlin GeneMark.hmm exon 144008 144304 . + . ID=Merlin_253_exon;Parent=Merlin_253_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 144008 144304 . + 0 ID=Merlin_253_CDS;Parent=Merlin_253_exon;seqid=Merlin +Merlin GeneMark.hmm gene 144301 144954 -836.139828 + . ID=Merlin_254;seqid=Merlin +Merlin GeneMark.hmm mRNA 144301 144954 . + . ID=Merlin_254_mRNA;Parent=Merlin_254;seqid=Merlin +Merlin GeneMark.hmm exon 144301 144954 . + . ID=Merlin_254_exon;Parent=Merlin_254_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 144301 144954 . + 0 ID=Merlin_254_CDS;Parent=Merlin_254_exon;seqid=Merlin +Merlin GeneMark.hmm gene 144964 145875 -1124.370545 + . ID=Merlin_255;seqid=Merlin +Merlin GeneMark.hmm mRNA 144964 145875 . + . ID=Merlin_255_mRNA;Parent=Merlin_255;seqid=Merlin +Merlin GeneMark.hmm exon 144964 145875 . + . ID=Merlin_255_exon;Parent=Merlin_255_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 144964 145875 . + 0 ID=Merlin_255_CDS;Parent=Merlin_255_exon;seqid=Merlin +Merlin GeneMark.hmm gene 145979 146218 -290.192159 + . ID=Merlin_256;seqid=Merlin +Merlin GeneMark.hmm mRNA 145979 146218 . + . ID=Merlin_256_mRNA;Parent=Merlin_256;seqid=Merlin +Merlin GeneMark.hmm exon 145979 146218 . + . ID=Merlin_256_exon;Parent=Merlin_256_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 145979 146218 . + 0 ID=Merlin_256_CDS;Parent=Merlin_256_exon;seqid=Merlin +Merlin GeneMark.hmm gene 146253 146519 -322.908748 + . ID=Merlin_257;seqid=Merlin +Merlin GeneMark.hmm mRNA 146253 146519 . + . ID=Merlin_257_mRNA;Parent=Merlin_257;seqid=Merlin +Merlin GeneMark.hmm exon 146253 146519 . + . ID=Merlin_257_exon;Parent=Merlin_257_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 146253 146519 . + 0 ID=Merlin_257_CDS;Parent=Merlin_257_exon;seqid=Merlin +Merlin GeneMark.hmm gene 146520 146744 -274.376507 + . ID=Merlin_258;seqid=Merlin +Merlin GeneMark.hmm mRNA 146520 146744 . + . ID=Merlin_258_mRNA;Parent=Merlin_258;seqid=Merlin +Merlin GeneMark.hmm exon 146520 146744 . + . ID=Merlin_258_exon;Parent=Merlin_258_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 146520 146744 . + 0 ID=Merlin_258_CDS;Parent=Merlin_258_exon;seqid=Merlin +Merlin GeneMark.hmm gene 146825 147040 -255.288456 + . ID=Merlin_259;seqid=Merlin +Merlin GeneMark.hmm mRNA 146825 147040 . + . ID=Merlin_259_mRNA;Parent=Merlin_259;seqid=Merlin +Merlin GeneMark.hmm exon 146825 147040 . + . ID=Merlin_259_exon;Parent=Merlin_259_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 146825 147040 . + 0 ID=Merlin_259_CDS;Parent=Merlin_259_exon;seqid=Merlin +Merlin GeneMark.hmm gene 147054 147419 -449.354834 + . ID=Merlin_260;seqid=Merlin +Merlin GeneMark.hmm mRNA 147054 147419 . + . ID=Merlin_260_mRNA;Parent=Merlin_260;seqid=Merlin +Merlin GeneMark.hmm exon 147054 147419 . + . ID=Merlin_260_exon;Parent=Merlin_260_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 147054 147419 . + 0 ID=Merlin_260_CDS;Parent=Merlin_260_exon;seqid=Merlin +Merlin GeneMark.hmm gene 147477 147755 -346.840279 + . ID=Merlin_261;seqid=Merlin +Merlin GeneMark.hmm mRNA 147477 147755 . + . ID=Merlin_261_mRNA;Parent=Merlin_261;seqid=Merlin +Merlin GeneMark.hmm exon 147477 147755 . + . ID=Merlin_261_exon;Parent=Merlin_261_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 147477 147755 . + 0 ID=Merlin_261_CDS;Parent=Merlin_261_exon;seqid=Merlin +Merlin GeneMark.hmm gene 147755 148078 -405.900125 + . ID=Merlin_262;seqid=Merlin +Merlin GeneMark.hmm mRNA 147755 148078 . + . ID=Merlin_262_mRNA;Parent=Merlin_262;seqid=Merlin +Merlin GeneMark.hmm exon 147755 148078 . + . ID=Merlin_262_exon;Parent=Merlin_262_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 147755 148078 . + 0 ID=Merlin_262_CDS;Parent=Merlin_262_exon;seqid=Merlin +Merlin GeneMark.hmm gene 148078 148293 -271.597843 + . ID=Merlin_263;seqid=Merlin +Merlin GeneMark.hmm mRNA 148078 148293 . + . ID=Merlin_263_mRNA;Parent=Merlin_263;seqid=Merlin +Merlin GeneMark.hmm exon 148078 148293 . + . ID=Merlin_263_exon;Parent=Merlin_263_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 148078 148293 . + 0 ID=Merlin_263_CDS;Parent=Merlin_263_exon;seqid=Merlin +Merlin GeneMark.hmm gene 148385 148636 -312.527190 + . ID=Merlin_264;seqid=Merlin +Merlin GeneMark.hmm mRNA 148385 148636 . + . ID=Merlin_264_mRNA;Parent=Merlin_264;seqid=Merlin +Merlin GeneMark.hmm exon 148385 148636 . + . ID=Merlin_264_exon;Parent=Merlin_264_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 148385 148636 . + 0 ID=Merlin_264_CDS;Parent=Merlin_264_exon;seqid=Merlin +Merlin GeneMark.hmm gene 148636 149229 -751.963856 + . ID=Merlin_265;seqid=Merlin +Merlin GeneMark.hmm mRNA 148636 149229 . + . ID=Merlin_265_mRNA;Parent=Merlin_265;seqid=Merlin +Merlin GeneMark.hmm exon 148636 149229 . + . ID=Merlin_265_exon;Parent=Merlin_265_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 148636 149229 . + 0 ID=Merlin_265_CDS;Parent=Merlin_265_exon;seqid=Merlin +Merlin GeneMark.hmm gene 149226 149555 -411.956487 + . ID=Merlin_266;seqid=Merlin +Merlin GeneMark.hmm mRNA 149226 149555 . + . ID=Merlin_266_mRNA;Parent=Merlin_266;seqid=Merlin +Merlin GeneMark.hmm exon 149226 149555 . + . ID=Merlin_266_exon;Parent=Merlin_266_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 149226 149555 . + 0 ID=Merlin_266_CDS;Parent=Merlin_266_exon;seqid=Merlin +Merlin GeneMark.hmm gene 149533 149880 -436.887846 + . ID=Merlin_267;seqid=Merlin +Merlin GeneMark.hmm mRNA 149533 149880 . + . ID=Merlin_267_mRNA;Parent=Merlin_267;seqid=Merlin +Merlin GeneMark.hmm exon 149533 149880 . + . ID=Merlin_267_exon;Parent=Merlin_267_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 149533 149880 . + 0 ID=Merlin_267_CDS;Parent=Merlin_267_exon;seqid=Merlin +Merlin GeneMark.hmm gene 149877 150737 -1096.070881 + . ID=Merlin_268;seqid=Merlin +Merlin GeneMark.hmm mRNA 149877 150737 . + . ID=Merlin_268_mRNA;Parent=Merlin_268;seqid=Merlin +Merlin GeneMark.hmm exon 149877 150737 . + . ID=Merlin_268_exon;Parent=Merlin_268_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 149877 150737 . + 0 ID=Merlin_268_CDS;Parent=Merlin_268_exon;seqid=Merlin +Merlin GeneMark.hmm gene 150734 150925 -235.875923 + . ID=Merlin_269;seqid=Merlin +Merlin GeneMark.hmm mRNA 150734 150925 . + . ID=Merlin_269_mRNA;Parent=Merlin_269;seqid=Merlin +Merlin GeneMark.hmm exon 150734 150925 . + . ID=Merlin_269_exon;Parent=Merlin_269_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 150734 150925 . + 0 ID=Merlin_269_CDS;Parent=Merlin_269_exon;seqid=Merlin +Merlin GeneMark.hmm gene 150922 151227 -402.602546 + . ID=Merlin_270;seqid=Merlin +Merlin GeneMark.hmm mRNA 150922 151227 . + . ID=Merlin_270_mRNA;Parent=Merlin_270;seqid=Merlin +Merlin GeneMark.hmm exon 150922 151227 . + . ID=Merlin_270_exon;Parent=Merlin_270_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 150922 151227 . + 0 ID=Merlin_270_CDS;Parent=Merlin_270_exon;seqid=Merlin +Merlin GeneMark.hmm gene 151218 153473 -2890.442885 + . ID=Merlin_271;seqid=Merlin +Merlin GeneMark.hmm mRNA 151218 153473 . + . ID=Merlin_271_mRNA;Parent=Merlin_271;seqid=Merlin +Merlin GeneMark.hmm exon 151218 153473 . + . ID=Merlin_271_exon;Parent=Merlin_271_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 151218 153473 . + 0 ID=Merlin_271_CDS;Parent=Merlin_271_exon;seqid=Merlin +Merlin GeneMark.hmm gene 153580 154722 -1440.286123 + . ID=Merlin_272;seqid=Merlin +Merlin GeneMark.hmm mRNA 153580 154722 . + . ID=Merlin_272_mRNA;Parent=Merlin_272;seqid=Merlin +Merlin GeneMark.hmm exon 153580 154722 . + . ID=Merlin_272_exon;Parent=Merlin_272_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 153580 154722 . + 0 ID=Merlin_272_CDS;Parent=Merlin_272_exon;seqid=Merlin +Merlin GeneMark.hmm gene 154749 155165 -537.328485 + . ID=Merlin_273;seqid=Merlin +Merlin GeneMark.hmm mRNA 154749 155165 . + . ID=Merlin_273_mRNA;Parent=Merlin_273;seqid=Merlin +Merlin GeneMark.hmm exon 154749 155165 . + . ID=Merlin_273_exon;Parent=Merlin_273_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 154749 155165 . + 0 ID=Merlin_273_CDS;Parent=Merlin_273_exon;seqid=Merlin +Merlin GeneMark.hmm gene 155162 155392 -284.548380 + . ID=Merlin_274;seqid=Merlin +Merlin GeneMark.hmm mRNA 155162 155392 . + . ID=Merlin_274_mRNA;Parent=Merlin_274;seqid=Merlin +Merlin GeneMark.hmm exon 155162 155392 . + . ID=Merlin_274_exon;Parent=Merlin_274_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 155162 155392 . + 0 ID=Merlin_274_CDS;Parent=Merlin_274_exon;seqid=Merlin +Merlin GeneMark.hmm gene 155392 156522 -1423.600588 + . ID=Merlin_275;seqid=Merlin +Merlin GeneMark.hmm mRNA 155392 156522 . + . ID=Merlin_275_mRNA;Parent=Merlin_275;seqid=Merlin +Merlin GeneMark.hmm exon 155392 156522 . + . ID=Merlin_275_exon;Parent=Merlin_275_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 155392 156522 . + 0 ID=Merlin_275_CDS;Parent=Merlin_275_exon;seqid=Merlin +Merlin GeneMark.hmm gene 156585 157088 -632.566444 + . ID=Merlin_276;seqid=Merlin +Merlin GeneMark.hmm mRNA 156585 157088 . + . ID=Merlin_276_mRNA;Parent=Merlin_276;seqid=Merlin +Merlin GeneMark.hmm exon 156585 157088 . + . ID=Merlin_276_exon;Parent=Merlin_276_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 156585 157088 . + 0 ID=Merlin_276_CDS;Parent=Merlin_276_exon;seqid=Merlin +Merlin GeneMark.hmm gene 157076 157432 -439.709209 + . ID=Merlin_277;seqid=Merlin +Merlin GeneMark.hmm mRNA 157076 157432 . + . ID=Merlin_277_mRNA;Parent=Merlin_277;seqid=Merlin +Merlin GeneMark.hmm exon 157076 157432 . + . ID=Merlin_277_exon;Parent=Merlin_277_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 157076 157432 . + 0 ID=Merlin_277_CDS;Parent=Merlin_277_exon;seqid=Merlin +Merlin GeneMark.hmm gene 157429 157734 -403.460144 + . ID=Merlin_278;seqid=Merlin +Merlin GeneMark.hmm mRNA 157429 157734 . + . ID=Merlin_278_mRNA;Parent=Merlin_278;seqid=Merlin +Merlin GeneMark.hmm exon 157429 157734 . + . ID=Merlin_278_exon;Parent=Merlin_278_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 157429 157734 . + 0 ID=Merlin_278_CDS;Parent=Merlin_278_exon;seqid=Merlin +Merlin GeneMark.hmm gene 157836 158312 -603.091441 + . ID=Merlin_279;seqid=Merlin +Merlin GeneMark.hmm mRNA 157836 158312 . + . ID=Merlin_279_mRNA;Parent=Merlin_279;seqid=Merlin +Merlin GeneMark.hmm exon 157836 158312 . + . ID=Merlin_279_exon;Parent=Merlin_279_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 157836 158312 . + 0 ID=Merlin_279_CDS;Parent=Merlin_279_exon;seqid=Merlin +Merlin GeneMark.hmm gene 158309 158668 -447.203441 + . ID=Merlin_280;seqid=Merlin +Merlin GeneMark.hmm mRNA 158309 158668 . + . ID=Merlin_280_mRNA;Parent=Merlin_280;seqid=Merlin +Merlin GeneMark.hmm exon 158309 158668 . + . ID=Merlin_280_exon;Parent=Merlin_280_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 158309 158668 . + 0 ID=Merlin_280_CDS;Parent=Merlin_280_exon;seqid=Merlin +Merlin GeneMark.hmm gene 158665 158838 -212.409539 + . ID=Merlin_281;seqid=Merlin +Merlin GeneMark.hmm mRNA 158665 158838 . + . ID=Merlin_281_mRNA;Parent=Merlin_281;seqid=Merlin +Merlin GeneMark.hmm exon 158665 158838 . + . ID=Merlin_281_exon;Parent=Merlin_281_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 158665 158838 . + 0 ID=Merlin_281_CDS;Parent=Merlin_281_exon;seqid=Merlin +Merlin GeneMark.hmm gene 158835 159731 -1132.126395 + . ID=Merlin_282;seqid=Merlin +Merlin GeneMark.hmm mRNA 158835 159731 . + . ID=Merlin_282_mRNA;Parent=Merlin_282;seqid=Merlin +Merlin GeneMark.hmm exon 158835 159731 . + . ID=Merlin_282_exon;Parent=Merlin_282_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 158835 159731 . + 0 ID=Merlin_282_CDS;Parent=Merlin_282_exon;seqid=Merlin +Merlin GeneMark.hmm gene 159731 159922 -235.781764 + . ID=Merlin_283;seqid=Merlin +Merlin GeneMark.hmm mRNA 159731 159922 . + . ID=Merlin_283_mRNA;Parent=Merlin_283;seqid=Merlin +Merlin GeneMark.hmm exon 159731 159922 . + . ID=Merlin_283_exon;Parent=Merlin_283_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 159731 159922 . + 0 ID=Merlin_283_CDS;Parent=Merlin_283_exon;seqid=Merlin +Merlin GeneMark.hmm gene 159922 160137 -267.519915 + . ID=Merlin_284;seqid=Merlin +Merlin GeneMark.hmm mRNA 159922 160137 . + . ID=Merlin_284_mRNA;Parent=Merlin_284;seqid=Merlin +Merlin GeneMark.hmm exon 159922 160137 . + . ID=Merlin_284_exon;Parent=Merlin_284_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 159922 160137 . + 0 ID=Merlin_284_CDS;Parent=Merlin_284_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160137 160436 -372.267833 + . ID=Merlin_285;seqid=Merlin +Merlin GeneMark.hmm mRNA 160137 160436 . + . ID=Merlin_285_mRNA;Parent=Merlin_285;seqid=Merlin +Merlin GeneMark.hmm exon 160137 160436 . + . ID=Merlin_285_exon;Parent=Merlin_285_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160137 160436 . + 0 ID=Merlin_285_CDS;Parent=Merlin_285_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160414 160641 -289.957825 + . ID=Merlin_286;seqid=Merlin +Merlin GeneMark.hmm mRNA 160414 160641 . + . ID=Merlin_286_mRNA;Parent=Merlin_286;seqid=Merlin +Merlin GeneMark.hmm exon 160414 160641 . + . ID=Merlin_286_exon;Parent=Merlin_286_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160414 160641 . + 0 ID=Merlin_286_CDS;Parent=Merlin_286_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160638 160985 -435.855402 + . ID=Merlin_287;seqid=Merlin +Merlin GeneMark.hmm mRNA 160638 160985 . + . ID=Merlin_287_mRNA;Parent=Merlin_287;seqid=Merlin +Merlin GeneMark.hmm exon 160638 160985 . + . ID=Merlin_287_exon;Parent=Merlin_287_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160638 160985 . + 0 ID=Merlin_287_CDS;Parent=Merlin_287_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160986 161549 -716.263909 + . ID=Merlin_288;seqid=Merlin +Merlin GeneMark.hmm mRNA 160986 161549 . + . ID=Merlin_288_mRNA;Parent=Merlin_288;seqid=Merlin +Merlin GeneMark.hmm exon 160986 161549 . + . ID=Merlin_288_exon;Parent=Merlin_288_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160986 161549 . + 0 ID=Merlin_288_CDS;Parent=Merlin_288_exon;seqid=Merlin +Merlin GeneMark.hmm gene 161546 161848 -371.966910 + . ID=Merlin_289;seqid=Merlin +Merlin GeneMark.hmm mRNA 161546 161848 . + . ID=Merlin_289_mRNA;Parent=Merlin_289;seqid=Merlin +Merlin GeneMark.hmm exon 161546 161848 . + . ID=Merlin_289_exon;Parent=Merlin_289_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 161546 161848 . + 0 ID=Merlin_289_CDS;Parent=Merlin_289_exon;seqid=Merlin +Merlin GeneMark.hmm gene 161845 162081 -287.849916 + . ID=Merlin_290;seqid=Merlin +Merlin GeneMark.hmm mRNA 161845 162081 . + . ID=Merlin_290_mRNA;Parent=Merlin_290;seqid=Merlin +Merlin GeneMark.hmm exon 161845 162081 . + . ID=Merlin_290_exon;Parent=Merlin_290_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 161845 162081 . + 0 ID=Merlin_290_CDS;Parent=Merlin_290_exon;seqid=Merlin +Merlin GeneMark.hmm gene 162074 162391 -387.962641 + . ID=Merlin_291;seqid=Merlin +Merlin GeneMark.hmm mRNA 162074 162391 . + . ID=Merlin_291_mRNA;Parent=Merlin_291;seqid=Merlin +Merlin GeneMark.hmm exon 162074 162391 . + . ID=Merlin_291_exon;Parent=Merlin_291_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 162074 162391 . + 0 ID=Merlin_291_CDS;Parent=Merlin_291_exon;seqid=Merlin +Merlin GeneMark.hmm gene 162449 162775 -406.965469 + . ID=Merlin_292;seqid=Merlin +Merlin GeneMark.hmm mRNA 162449 162775 . + . ID=Merlin_292_mRNA;Parent=Merlin_292;seqid=Merlin +Merlin GeneMark.hmm exon 162449 162775 . + . ID=Merlin_292_exon;Parent=Merlin_292_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 162449 162775 . + 0 ID=Merlin_292_CDS;Parent=Merlin_292_exon;seqid=Merlin +Merlin GeneMark.hmm gene 162905 163159 -321.120824 + . ID=Merlin_293;seqid=Merlin +Merlin GeneMark.hmm mRNA 162905 163159 . + . ID=Merlin_293_mRNA;Parent=Merlin_293;seqid=Merlin +Merlin GeneMark.hmm exon 162905 163159 . + . ID=Merlin_293_exon;Parent=Merlin_293_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 162905 163159 . + 0 ID=Merlin_293_CDS;Parent=Merlin_293_exon;seqid=Merlin +Merlin GeneMark.hmm gene 163465 163644 -217.336356 + . ID=Merlin_294;seqid=Merlin +Merlin GeneMark.hmm mRNA 163465 163644 . + . ID=Merlin_294_mRNA;Parent=Merlin_294;seqid=Merlin +Merlin GeneMark.hmm exon 163465 163644 . + . ID=Merlin_294_exon;Parent=Merlin_294_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 163465 163644 . + 0 ID=Merlin_294_CDS;Parent=Merlin_294_exon;seqid=Merlin +Merlin GeneMark.hmm gene 163764 164132 -441.864606 + . ID=Merlin_295;seqid=Merlin +Merlin GeneMark.hmm mRNA 163764 164132 . + . ID=Merlin_295_mRNA;Parent=Merlin_295;seqid=Merlin +Merlin GeneMark.hmm exon 163764 164132 . + . ID=Merlin_295_exon;Parent=Merlin_295_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 163764 164132 . + 0 ID=Merlin_295_CDS;Parent=Merlin_295_exon;seqid=Merlin +Merlin GeneMark.hmm gene 164158 164646 -602.734029 + . ID=Merlin_296;seqid=Merlin +Merlin GeneMark.hmm mRNA 164158 164646 . + . ID=Merlin_296_mRNA;Parent=Merlin_296;seqid=Merlin +Merlin GeneMark.hmm exon 164158 164646 . + . ID=Merlin_296_exon;Parent=Merlin_296_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 164158 164646 . + 0 ID=Merlin_296_CDS;Parent=Merlin_296_exon;seqid=Merlin +Merlin GeneMark.hmm gene 164715 165071 -451.064481 + . ID=Merlin_297;seqid=Merlin +Merlin GeneMark.hmm mRNA 164715 165071 . + . ID=Merlin_297_mRNA;Parent=Merlin_297;seqid=Merlin +Merlin GeneMark.hmm exon 164715 165071 . + . ID=Merlin_297_exon;Parent=Merlin_297_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 164715 165071 . + 0 ID=Merlin_297_CDS;Parent=Merlin_297_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165107 165601 -618.360781 + . ID=Merlin_298;seqid=Merlin +Merlin GeneMark.hmm mRNA 165107 165601 . + . ID=Merlin_298_mRNA;Parent=Merlin_298;seqid=Merlin +Merlin GeneMark.hmm exon 165107 165601 . + . ID=Merlin_298_exon;Parent=Merlin_298_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165107 165601 . + 0 ID=Merlin_298_CDS;Parent=Merlin_298_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165612 165773 -191.091430 + . ID=Merlin_299;seqid=Merlin +Merlin GeneMark.hmm mRNA 165612 165773 . + . ID=Merlin_299_mRNA;Parent=Merlin_299;seqid=Merlin +Merlin GeneMark.hmm exon 165612 165773 . + . ID=Merlin_299_exon;Parent=Merlin_299_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165612 165773 . + 0 ID=Merlin_299_CDS;Parent=Merlin_299_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165770 166000 -285.030914 + . ID=Merlin_300;seqid=Merlin +Merlin GeneMark.hmm mRNA 165770 166000 . + . ID=Merlin_300_mRNA;Parent=Merlin_300;seqid=Merlin +Merlin GeneMark.hmm exon 165770 166000 . + . ID=Merlin_300_exon;Parent=Merlin_300_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165770 166000 . + 0 ID=Merlin_300_CDS;Parent=Merlin_300_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165997 166191 -241.609251 + . ID=Merlin_301;seqid=Merlin +Merlin GeneMark.hmm mRNA 165997 166191 . + . ID=Merlin_301_mRNA;Parent=Merlin_301;seqid=Merlin +Merlin GeneMark.hmm exon 165997 166191 . + . ID=Merlin_301_exon;Parent=Merlin_301_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165997 166191 . + 0 ID=Merlin_301_CDS;Parent=Merlin_301_exon;seqid=Merlin +Merlin GeneMark.hmm gene 166352 167200 -1091.167753 + . ID=Merlin_302;seqid=Merlin +Merlin GeneMark.hmm mRNA 166352 167200 . + . ID=Merlin_302_mRNA;Parent=Merlin_302;seqid=Merlin +Merlin GeneMark.hmm exon 166352 167200 . + . ID=Merlin_302_exon;Parent=Merlin_302_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 166352 167200 . + 0 ID=Merlin_302_CDS;Parent=Merlin_302_exon;seqid=Merlin +Merlin GeneMark.hmm gene 167197 167433 -294.645060 + . ID=Merlin_303;seqid=Merlin +Merlin GeneMark.hmm mRNA 167197 167433 . + . ID=Merlin_303_mRNA;Parent=Merlin_303;seqid=Merlin +Merlin GeneMark.hmm exon 167197 167433 . + . ID=Merlin_303_exon;Parent=Merlin_303_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 167197 167433 . + 0 ID=Merlin_303_CDS;Parent=Merlin_303_exon;seqid=Merlin +Merlin GeneMark.hmm gene 167487 168944 -1811.170385 + . ID=Merlin_304;seqid=Merlin +Merlin GeneMark.hmm mRNA 167487 168944 . + . ID=Merlin_304_mRNA;Parent=Merlin_304;seqid=Merlin +Merlin GeneMark.hmm exon 167487 168944 . + . ID=Merlin_304_exon;Parent=Merlin_304_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 167487 168944 . + 0 ID=Merlin_304_CDS;Parent=Merlin_304_exon;seqid=Merlin +Merlin GeneMark.hmm gene 168941 169120 -220.159549 + . ID=Merlin_305;seqid=Merlin +Merlin GeneMark.hmm mRNA 168941 169120 . + . ID=Merlin_305_mRNA;Parent=Merlin_305;seqid=Merlin +Merlin GeneMark.hmm exon 168941 169120 . + . ID=Merlin_305_exon;Parent=Merlin_305_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 168941 169120 . + 0 ID=Merlin_305_CDS;Parent=Merlin_305_exon;seqid=Merlin +Merlin GeneMark.hmm gene 169175 171265 -2617.092758 + . ID=Merlin_306;seqid=Merlin +Merlin GeneMark.hmm mRNA 169175 171265 . + . ID=Merlin_306_mRNA;Parent=Merlin_306;seqid=Merlin +Merlin GeneMark.hmm exon 169175 171265 . + . ID=Merlin_306_exon;Parent=Merlin_306_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 169175 171265 . + 0 ID=Merlin_306_CDS;Parent=Merlin_306_exon;seqid=Merlin +Merlin GeneMark.hmm gene 171301 172788 -1876.322043 + . ID=Merlin_307;seqid=Merlin +Merlin GeneMark.hmm mRNA 171301 172788 . + . ID=Merlin_307_mRNA;Parent=Merlin_307;seqid=Merlin +Merlin GeneMark.hmm exon 171301 172788 . + . ID=Merlin_307_exon;Parent=Merlin_307_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 171301 172788 . + 0 ID=Merlin_307_CDS;Parent=Merlin_307_exon;seqid=Merlin diff -r e7a6f7a7148d -r ab0d6782a95f test-data/bw/data.bw Binary file test-data/bw/data.bw has changed diff -r e7a6f7a7148d -r ab0d6782a95f test-data/cram/merlin-sample.cram Binary file test-data/cram/merlin-sample.cram has changed diff -r e7a6f7a7148d -r ab0d6782a95f test-data/gff3/merlin.gff --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/gff3/merlin.gff Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,1230 @@ +##gff-version 3 +##sequence-region Merlin 1 172788 +Merlin GeneMark.hmm gene 2 691 -856.563659 + . ID=Merlin_1;seqid=Merlin +Merlin GeneMark.hmm mRNA 2 691 . + . ID=Merlin_1_mRNA;Parent=Merlin_1;seqid=Merlin;color=#00ff00 +Merlin GeneMark.hmm exon 2 691 . + . ID=Merlin_1_exon;Parent=Merlin_1_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 2 691 . + 0 ID=Merlin_1_CDS;Parent=Merlin_1_exon;seqid=Merlin +Merlin GeneMark.hmm gene 752 1039 -339.046618 + . ID=Merlin_2;seqid=Merlin +Merlin GeneMark.hmm mRNA 752 1039 . + . ID=Merlin_2_mRNA;Parent=Merlin_2;seqid=Merlin +Merlin GeneMark.hmm exon 752 1039 . + . ID=Merlin_2_exon;Parent=Merlin_2_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 752 1039 . + 0 ID=Merlin_2_CDS;Parent=Merlin_2_exon;seqid=Merlin +Merlin GeneMark.hmm gene 1067 2011 -1229.683915 - . ID=Merlin_3;seqid=Merlin +Merlin GeneMark.hmm mRNA 1067 2011 . - . ID=Merlin_3_mRNA;Parent=Merlin_3;seqid=Merlin +Merlin GeneMark.hmm exon 1067 2011 . - . ID=Merlin_3_exon;Parent=Merlin_3_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 1067 2011 . - 0 ID=Merlin_3_CDS;Parent=Merlin_3_exon;seqid=Merlin +Merlin GeneMark.hmm gene 2011 3066 -1335.034872 - . ID=Merlin_4;seqid=Merlin +Merlin GeneMark.hmm mRNA 2011 3066 . - . ID=Merlin_4_mRNA;Parent=Merlin_4;seqid=Merlin +Merlin GeneMark.hmm exon 2011 3066 . - . ID=Merlin_4_exon;Parent=Merlin_4_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 2011 3066 . - 0 ID=Merlin_4_CDS;Parent=Merlin_4_exon;seqid=Merlin +Merlin GeneMark.hmm gene 3066 4796 -2177.374893 - . ID=Merlin_5;seqid=Merlin +Merlin GeneMark.hmm mRNA 3066 4796 . - . ID=Merlin_5_mRNA;Parent=Merlin_5;seqid=Merlin +Merlin GeneMark.hmm exon 3066 4796 . - . ID=Merlin_5_exon;Parent=Merlin_5_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 3066 4796 . - 0 ID=Merlin_5_CDS;Parent=Merlin_5_exon;seqid=Merlin +Merlin GeneMark.hmm gene 4793 5317 -682.565030 - . ID=Merlin_6;seqid=Merlin +Merlin GeneMark.hmm mRNA 4793 5317 . - . ID=Merlin_6_mRNA;Parent=Merlin_6;seqid=Merlin +Merlin GeneMark.hmm exon 4793 5317 . - . ID=Merlin_6_exon;Parent=Merlin_6_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 4793 5317 . - 0 ID=Merlin_6_CDS;Parent=Merlin_6_exon;seqid=Merlin +Merlin GeneMark.hmm gene 5289 6431 -1457.525863 - . ID=Merlin_7;seqid=Merlin +Merlin GeneMark.hmm mRNA 5289 6431 . - . ID=Merlin_7_mRNA;Parent=Merlin_7;seqid=Merlin +Merlin GeneMark.hmm exon 5289 6431 . - . ID=Merlin_7_exon;Parent=Merlin_7_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 5289 6431 . - 0 ID=Merlin_7_CDS;Parent=Merlin_7_exon;seqid=Merlin +Merlin GeneMark.hmm gene 6428 7180 -968.015933 - . ID=Merlin_8;seqid=Merlin +Merlin GeneMark.hmm mRNA 6428 7180 . - . ID=Merlin_8_mRNA;Parent=Merlin_8;seqid=Merlin +Merlin GeneMark.hmm exon 6428 7180 . - . ID=Merlin_8_exon;Parent=Merlin_8_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 6428 7180 . - 0 ID=Merlin_8_CDS;Parent=Merlin_8_exon;seqid=Merlin +Merlin GeneMark.hmm gene 7228 7857 -809.330137 + . ID=Merlin_9;seqid=Merlin +Merlin GeneMark.hmm mRNA 7228 7857 . + . ID=Merlin_9_mRNA;Parent=Merlin_9;seqid=Merlin +Merlin GeneMark.hmm exon 7228 7857 . + . ID=Merlin_9_exon;Parent=Merlin_9_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 7228 7857 . + 0 ID=Merlin_9_CDS;Parent=Merlin_9_exon;seqid=Merlin +Merlin GeneMark.hmm gene 7857 8252 -515.006678 + . ID=Merlin_10;seqid=Merlin +Merlin GeneMark.hmm mRNA 7857 8252 . + . ID=Merlin_10_mRNA;Parent=Merlin_10;seqid=Merlin +Merlin GeneMark.hmm exon 7857 8252 . + . ID=Merlin_10_exon;Parent=Merlin_10_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 7857 8252 . + 0 ID=Merlin_10_CDS;Parent=Merlin_10_exon;seqid=Merlin +Merlin GeneMark.hmm gene 8340 8753 -522.529341 + . ID=Merlin_11;seqid=Merlin +Merlin GeneMark.hmm mRNA 8340 8753 . + . ID=Merlin_11_mRNA;Parent=Merlin_11;seqid=Merlin +Merlin GeneMark.hmm exon 8340 8753 . + . ID=Merlin_11_exon;Parent=Merlin_11_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 8340 8753 . + 0 ID=Merlin_11_CDS;Parent=Merlin_11_exon;seqid=Merlin +Merlin GeneMark.hmm gene 8787 8951 -212.019038 + . ID=Merlin_12;seqid=Merlin +Merlin GeneMark.hmm mRNA 8787 8951 . + . ID=Merlin_12_mRNA;Parent=Merlin_12;seqid=Merlin +Merlin GeneMark.hmm exon 8787 8951 . + . ID=Merlin_12_exon;Parent=Merlin_12_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 8787 8951 . + 0 ID=Merlin_12_CDS;Parent=Merlin_12_exon;seqid=Merlin +Merlin GeneMark.hmm gene 9014 9241 -274.669850 - . ID=Merlin_13;seqid=Merlin +Merlin GeneMark.hmm mRNA 9014 9241 . - . ID=Merlin_13_mRNA;Parent=Merlin_13;seqid=Merlin +Merlin GeneMark.hmm exon 9014 9241 . - . ID=Merlin_13_exon;Parent=Merlin_13_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 9014 9241 . - 0 ID=Merlin_13_CDS;Parent=Merlin_13_exon;seqid=Merlin +Merlin GeneMark.hmm gene 9248 10747 -1911.373457 - . ID=Merlin_14;seqid=Merlin +Merlin GeneMark.hmm mRNA 9248 10747 . - . ID=Merlin_14_mRNA;Parent=Merlin_14;seqid=Merlin +Merlin GeneMark.hmm exon 9248 10747 . - . ID=Merlin_14_exon;Parent=Merlin_14_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 9248 10747 . - 0 ID=Merlin_14_CDS;Parent=Merlin_14_exon;seqid=Merlin +Merlin GeneMark.hmm gene 10800 11435 -778.108633 + . ID=Merlin_15;seqid=Merlin +Merlin GeneMark.hmm mRNA 10800 11435 . + . ID=Merlin_15_mRNA;Parent=Merlin_15;seqid=Merlin +Merlin GeneMark.hmm exon 10800 11435 . + . ID=Merlin_15_exon;Parent=Merlin_15_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 10800 11435 . + 0 ID=Merlin_15_CDS;Parent=Merlin_15_exon;seqid=Merlin +Merlin GeneMark.hmm gene 11469 12290 -1045.093825 + . ID=Merlin_16;seqid=Merlin +Merlin GeneMark.hmm mRNA 11469 12290 . + . ID=Merlin_16_mRNA;Parent=Merlin_16;seqid=Merlin +Merlin GeneMark.hmm exon 11469 12290 . + . ID=Merlin_16_exon;Parent=Merlin_16_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 11469 12290 . + 0 ID=Merlin_16_CDS;Parent=Merlin_16_exon;seqid=Merlin +Merlin GeneMark.hmm gene 12365 12601 -286.579590 + . ID=Merlin_17;seqid=Merlin +Merlin GeneMark.hmm mRNA 12365 12601 . + . ID=Merlin_17_mRNA;Parent=Merlin_17;seqid=Merlin +Merlin GeneMark.hmm exon 12365 12601 . + . ID=Merlin_17_exon;Parent=Merlin_17_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 12365 12601 . + 0 ID=Merlin_17_CDS;Parent=Merlin_17_exon;seqid=Merlin +Merlin GeneMark.hmm gene 12598 12951 -440.013978 + . ID=Merlin_18;seqid=Merlin +Merlin GeneMark.hmm mRNA 12598 12951 . + . ID=Merlin_18_mRNA;Parent=Merlin_18;seqid=Merlin +Merlin GeneMark.hmm exon 12598 12951 . + . ID=Merlin_18_exon;Parent=Merlin_18_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 12598 12951 . + 0 ID=Merlin_18_CDS;Parent=Merlin_18_exon;seqid=Merlin +Merlin GeneMark.hmm gene 13067 13330 -321.884922 + . ID=Merlin_19;seqid=Merlin +Merlin GeneMark.hmm mRNA 13067 13330 . + . ID=Merlin_19_mRNA;Parent=Merlin_19;seqid=Merlin +Merlin GeneMark.hmm exon 13067 13330 . + . ID=Merlin_19_exon;Parent=Merlin_19_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 13067 13330 . + 0 ID=Merlin_19_CDS;Parent=Merlin_19_exon;seqid=Merlin +Merlin GeneMark.hmm gene 13340 14341 -1253.644245 + . ID=Merlin_20;seqid=Merlin +Merlin GeneMark.hmm mRNA 13340 14341 . + . ID=Merlin_20_mRNA;Parent=Merlin_20;seqid=Merlin +Merlin GeneMark.hmm exon 13340 14341 . + . ID=Merlin_20_exon;Parent=Merlin_20_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 13340 14341 . + 0 ID=Merlin_20_CDS;Parent=Merlin_20_exon;seqid=Merlin +Merlin GeneMark.hmm gene 14320 14883 -740.935174 + . ID=Merlin_21;seqid=Merlin +Merlin GeneMark.hmm mRNA 14320 14883 . + . ID=Merlin_21_mRNA;Parent=Merlin_21;seqid=Merlin +Merlin GeneMark.hmm exon 14320 14883 . + . ID=Merlin_21_exon;Parent=Merlin_21_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 14320 14883 . + 0 ID=Merlin_21_CDS;Parent=Merlin_21_exon;seqid=Merlin +Merlin GeneMark.hmm gene 14911 16197 -1617.100759 - . ID=Merlin_22;seqid=Merlin +Merlin GeneMark.hmm mRNA 14911 16197 . - . ID=Merlin_22_mRNA;Parent=Merlin_22;seqid=Merlin +Merlin GeneMark.hmm exon 14911 16197 . - . ID=Merlin_22_exon;Parent=Merlin_22_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 14911 16197 . - 0 ID=Merlin_22_CDS;Parent=Merlin_22_exon;seqid=Merlin +Merlin GeneMark.hmm gene 16289 17836 -1947.052483 - . ID=Merlin_23;seqid=Merlin +Merlin GeneMark.hmm mRNA 16289 17836 . - . ID=Merlin_23_mRNA;Parent=Merlin_23;seqid=Merlin +Merlin GeneMark.hmm exon 16289 17836 . - . ID=Merlin_23_exon;Parent=Merlin_23_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 16289 17836 . - 0 ID=Merlin_23_CDS;Parent=Merlin_23_exon;seqid=Merlin +Merlin GeneMark.hmm gene 17858 18673 -991.849469 - . ID=Merlin_24;seqid=Merlin +Merlin GeneMark.hmm mRNA 17858 18673 . - . ID=Merlin_24_mRNA;Parent=Merlin_24;seqid=Merlin +Merlin GeneMark.hmm exon 17858 18673 . - . ID=Merlin_24_exon;Parent=Merlin_24_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 17858 18673 . - 0 ID=Merlin_24_CDS;Parent=Merlin_24_exon;seqid=Merlin +Merlin GeneMark.hmm gene 18707 19351 -821.724123 - . ID=Merlin_25;seqid=Merlin +Merlin GeneMark.hmm mRNA 18707 19351 . - . ID=Merlin_25_mRNA;Parent=Merlin_25;seqid=Merlin +Merlin GeneMark.hmm exon 18707 19351 . - . ID=Merlin_25_exon;Parent=Merlin_25_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 18707 19351 . - 0 ID=Merlin_25_CDS;Parent=Merlin_25_exon;seqid=Merlin +Merlin GeneMark.hmm gene 19351 19776 -538.184958 - . ID=Merlin_26;seqid=Merlin +Merlin GeneMark.hmm mRNA 19351 19776 . - . ID=Merlin_26_mRNA;Parent=Merlin_26;seqid=Merlin +Merlin GeneMark.hmm exon 19351 19776 . - . ID=Merlin_26_exon;Parent=Merlin_26_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 19351 19776 . - 0 ID=Merlin_26_CDS;Parent=Merlin_26_exon;seqid=Merlin +Merlin GeneMark.hmm gene 19776 19988 -255.987740 - . ID=Merlin_27;seqid=Merlin +Merlin GeneMark.hmm mRNA 19776 19988 . - . ID=Merlin_27_mRNA;Parent=Merlin_27;seqid=Merlin +Merlin GeneMark.hmm exon 19776 19988 . - . ID=Merlin_27_exon;Parent=Merlin_27_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 19776 19988 . - 0 ID=Merlin_27_CDS;Parent=Merlin_27_exon;seqid=Merlin +Merlin GeneMark.hmm gene 19988 21550 -1974.103338 - . ID=Merlin_28;seqid=Merlin +Merlin GeneMark.hmm mRNA 19988 21550 . - . ID=Merlin_28_mRNA;Parent=Merlin_28;seqid=Merlin +Merlin GeneMark.hmm exon 19988 21550 . - . ID=Merlin_28_exon;Parent=Merlin_28_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 19988 21550 . - 0 ID=Merlin_28_CDS;Parent=Merlin_28_exon;seqid=Merlin +Merlin GeneMark.hmm gene 21625 22116 -616.669463 - . ID=Merlin_29;seqid=Merlin +Merlin GeneMark.hmm mRNA 21625 22116 . - . ID=Merlin_29_mRNA;Parent=Merlin_29;seqid=Merlin +Merlin GeneMark.hmm exon 21625 22116 . - . ID=Merlin_29_exon;Parent=Merlin_29_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 21625 22116 . - 0 ID=Merlin_29_CDS;Parent=Merlin_29_exon;seqid=Merlin +Merlin GeneMark.hmm gene 22240 24216 -2488.948058 - . ID=Merlin_30;seqid=Merlin +Merlin GeneMark.hmm mRNA 22240 24216 . - . ID=Merlin_30_mRNA;Parent=Merlin_30;seqid=Merlin +Merlin GeneMark.hmm exon 22240 24216 . - . ID=Merlin_30_exon;Parent=Merlin_30_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 22240 24216 . - 0 ID=Merlin_30_CDS;Parent=Merlin_30_exon;seqid=Merlin +Merlin GeneMark.hmm gene 24250 26094 -2334.323049 - . ID=Merlin_31;seqid=Merlin +Merlin GeneMark.hmm mRNA 24250 26094 . - . ID=Merlin_31_mRNA;Parent=Merlin_31;seqid=Merlin +Merlin GeneMark.hmm exon 24250 26094 . - . ID=Merlin_31_exon;Parent=Merlin_31_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 24250 26094 . - 0 ID=Merlin_31_CDS;Parent=Merlin_31_exon;seqid=Merlin +Merlin GeneMark.hmm gene 26072 26569 -622.542092 - . ID=Merlin_32;seqid=Merlin +Merlin GeneMark.hmm mRNA 26072 26569 . - . ID=Merlin_32_mRNA;Parent=Merlin_32;seqid=Merlin +Merlin GeneMark.hmm exon 26072 26569 . - . ID=Merlin_32_exon;Parent=Merlin_32_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 26072 26569 . - 0 ID=Merlin_32_CDS;Parent=Merlin_32_exon;seqid=Merlin +Merlin GeneMark.hmm gene 26572 27390 -1062.517306 - . ID=Merlin_33;seqid=Merlin +Merlin GeneMark.hmm mRNA 26572 27390 . - . ID=Merlin_33_mRNA;Parent=Merlin_33;seqid=Merlin +Merlin GeneMark.hmm exon 26572 27390 . - . ID=Merlin_33_exon;Parent=Merlin_33_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 26572 27390 . - 0 ID=Merlin_33_CDS;Parent=Merlin_33_exon;seqid=Merlin +Merlin GeneMark.hmm gene 27434 28204 -971.349898 - . ID=Merlin_34;seqid=Merlin +Merlin GeneMark.hmm mRNA 27434 28204 . - . ID=Merlin_34_mRNA;Parent=Merlin_34;seqid=Merlin +Merlin GeneMark.hmm exon 27434 28204 . - . ID=Merlin_34_exon;Parent=Merlin_34_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 27434 28204 . - 0 ID=Merlin_34_CDS;Parent=Merlin_34_exon;seqid=Merlin +Merlin GeneMark.hmm gene 28201 29130 -1172.195550 - . ID=Merlin_35;seqid=Merlin +Merlin GeneMark.hmm mRNA 28201 29130 . - . ID=Merlin_35_mRNA;Parent=Merlin_35;seqid=Merlin +Merlin GeneMark.hmm exon 28201 29130 . - . ID=Merlin_35_exon;Parent=Merlin_35_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 28201 29130 . - 0 ID=Merlin_35_CDS;Parent=Merlin_35_exon;seqid=Merlin +Merlin GeneMark.hmm gene 29162 30553 -1754.882559 - . ID=Merlin_36;seqid=Merlin +Merlin GeneMark.hmm mRNA 29162 30553 . - . ID=Merlin_36_mRNA;Parent=Merlin_36;seqid=Merlin +Merlin GeneMark.hmm exon 29162 30553 . - . ID=Merlin_36_exon;Parent=Merlin_36_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 29162 30553 . - 0 ID=Merlin_36_CDS;Parent=Merlin_36_exon;seqid=Merlin +Merlin GeneMark.hmm gene 30564 31982 -1840.409176 - . ID=Merlin_37;seqid=Merlin +Merlin GeneMark.hmm mRNA 30564 31982 . - . ID=Merlin_37_mRNA;Parent=Merlin_37;seqid=Merlin +Merlin GeneMark.hmm exon 30564 31982 . - . ID=Merlin_37_exon;Parent=Merlin_37_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 30564 31982 . - 0 ID=Merlin_37_CDS;Parent=Merlin_37_exon;seqid=Merlin +Merlin GeneMark.hmm gene 31982 32632 -810.715921 - . ID=Merlin_38;seqid=Merlin +Merlin GeneMark.hmm mRNA 31982 32632 . - . ID=Merlin_38_mRNA;Parent=Merlin_38;seqid=Merlin +Merlin GeneMark.hmm exon 31982 32632 . - . ID=Merlin_38_exon;Parent=Merlin_38_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 31982 32632 . - 0 ID=Merlin_38_CDS;Parent=Merlin_38_exon;seqid=Merlin +Merlin GeneMark.hmm gene 32632 34437 -2286.512966 - . ID=Merlin_39;seqid=Merlin +Merlin GeneMark.hmm mRNA 32632 34437 . - . ID=Merlin_39_mRNA;Parent=Merlin_39;seqid=Merlin +Merlin GeneMark.hmm exon 32632 34437 . - . ID=Merlin_39_exon;Parent=Merlin_39_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 32632 34437 . - 0 ID=Merlin_39_CDS;Parent=Merlin_39_exon;seqid=Merlin +Merlin GeneMark.hmm gene 34434 35300 -1103.339440 - . ID=Merlin_40;seqid=Merlin +Merlin GeneMark.hmm mRNA 34434 35300 . - . ID=Merlin_40_mRNA;Parent=Merlin_40;seqid=Merlin +Merlin GeneMark.hmm exon 34434 35300 . - . ID=Merlin_40_exon;Parent=Merlin_40_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 34434 35300 . - 0 ID=Merlin_40_CDS;Parent=Merlin_40_exon;seqid=Merlin +Merlin GeneMark.hmm gene 35372 36385 -1286.607331 - . ID=Merlin_41;seqid=Merlin +Merlin GeneMark.hmm mRNA 35372 36385 . - . ID=Merlin_41_mRNA;Parent=Merlin_41;seqid=Merlin +Merlin GeneMark.hmm exon 35372 36385 . - . ID=Merlin_41_exon;Parent=Merlin_41_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 35372 36385 . - 0 ID=Merlin_41_CDS;Parent=Merlin_41_exon;seqid=Merlin +Merlin GeneMark.hmm gene 36378 39479 -3926.862479 - . ID=Merlin_42;seqid=Merlin +Merlin GeneMark.hmm mRNA 36378 39479 . - . ID=Merlin_42_mRNA;Parent=Merlin_42;seqid=Merlin +Merlin GeneMark.hmm exon 36378 39479 . - . ID=Merlin_42_exon;Parent=Merlin_42_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 36378 39479 . - 0 ID=Merlin_42_CDS;Parent=Merlin_42_exon;seqid=Merlin +Merlin GeneMark.hmm gene 39476 41416 -2421.657174 - . ID=Merlin_43;seqid=Merlin +Merlin GeneMark.hmm mRNA 39476 41416 . - . ID=Merlin_43_mRNA;Parent=Merlin_43;seqid=Merlin +Merlin GeneMark.hmm exon 39476 41416 . - . ID=Merlin_43_exon;Parent=Merlin_43_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 39476 41416 . - 0 ID=Merlin_43_CDS;Parent=Merlin_43_exon;seqid=Merlin +Merlin GeneMark.hmm gene 41416 41709 -381.858612 - . ID=Merlin_44;seqid=Merlin +Merlin GeneMark.hmm mRNA 41416 41709 . - . ID=Merlin_44_mRNA;Parent=Merlin_44;seqid=Merlin +Merlin GeneMark.hmm exon 41416 41709 . - . ID=Merlin_44_exon;Parent=Merlin_44_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 41416 41709 . - 0 ID=Merlin_44_CDS;Parent=Merlin_44_exon;seqid=Merlin +Merlin GeneMark.hmm gene 41709 42224 -673.160274 - . ID=Merlin_45;seqid=Merlin +Merlin GeneMark.hmm mRNA 41709 42224 . - . ID=Merlin_45_mRNA;Parent=Merlin_45;seqid=Merlin +Merlin GeneMark.hmm exon 41709 42224 . - . ID=Merlin_45_exon;Parent=Merlin_45_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 41709 42224 . - 0 ID=Merlin_45_CDS;Parent=Merlin_45_exon;seqid=Merlin +Merlin GeneMark.hmm gene 42224 43951 -2203.710381 - . ID=Merlin_46;seqid=Merlin +Merlin GeneMark.hmm mRNA 42224 43951 . - . ID=Merlin_46_mRNA;Parent=Merlin_46;seqid=Merlin +Merlin GeneMark.hmm exon 42224 43951 . - . ID=Merlin_46_exon;Parent=Merlin_46_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 42224 43951 . - 0 ID=Merlin_46_CDS;Parent=Merlin_46_exon;seqid=Merlin +Merlin GeneMark.hmm gene 43951 44526 -730.479121 - . ID=Merlin_47;seqid=Merlin +Merlin GeneMark.hmm mRNA 43951 44526 . - . ID=Merlin_47_mRNA;Parent=Merlin_47;seqid=Merlin +Merlin GeneMark.hmm exon 43951 44526 . - . ID=Merlin_47_exon;Parent=Merlin_47_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 43951 44526 . - 0 ID=Merlin_47_CDS;Parent=Merlin_47_exon;seqid=Merlin +Merlin GeneMark.hmm gene 44576 45025 -562.019925 + . ID=Merlin_48;seqid=Merlin +Merlin GeneMark.hmm mRNA 44576 45025 . + . ID=Merlin_48_mRNA;Parent=Merlin_48;seqid=Merlin +Merlin GeneMark.hmm exon 44576 45025 . + . ID=Merlin_48_exon;Parent=Merlin_48_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 44576 45025 . + 0 ID=Merlin_48_CDS;Parent=Merlin_48_exon;seqid=Merlin +Merlin GeneMark.hmm gene 45025 45855 -1066.702009 + . ID=Merlin_49;seqid=Merlin +Merlin GeneMark.hmm mRNA 45025 45855 . + . ID=Merlin_49_mRNA;Parent=Merlin_49;seqid=Merlin +Merlin GeneMark.hmm exon 45025 45855 . + . ID=Merlin_49_exon;Parent=Merlin_49_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 45025 45855 . + 0 ID=Merlin_49_CDS;Parent=Merlin_49_exon;seqid=Merlin +Merlin GeneMark.hmm gene 45940 46527 -776.360306 + . ID=Merlin_50;seqid=Merlin +Merlin GeneMark.hmm mRNA 45940 46527 . + . ID=Merlin_50_mRNA;Parent=Merlin_50;seqid=Merlin +Merlin GeneMark.hmm exon 45940 46527 . + . ID=Merlin_50_exon;Parent=Merlin_50_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 45940 46527 . + 0 ID=Merlin_50_CDS;Parent=Merlin_50_exon;seqid=Merlin +Merlin GeneMark.hmm gene 46527 47255 -921.088284 + . ID=Merlin_51;seqid=Merlin +Merlin GeneMark.hmm mRNA 46527 47255 . + . ID=Merlin_51_mRNA;Parent=Merlin_51;seqid=Merlin +Merlin GeneMark.hmm exon 46527 47255 . + . ID=Merlin_51_exon;Parent=Merlin_51_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 46527 47255 . + 0 ID=Merlin_51_CDS;Parent=Merlin_51_exon;seqid=Merlin +Merlin GeneMark.hmm gene 47252 47485 -286.785634 + . ID=Merlin_52;seqid=Merlin +Merlin GeneMark.hmm mRNA 47252 47485 . + . ID=Merlin_52_mRNA;Parent=Merlin_52;seqid=Merlin +Merlin GeneMark.hmm exon 47252 47485 . + . ID=Merlin_52_exon;Parent=Merlin_52_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 47252 47485 . + 0 ID=Merlin_52_CDS;Parent=Merlin_52_exon;seqid=Merlin +Merlin GeneMark.hmm gene 47485 47940 -595.997014 + . ID=Merlin_53;seqid=Merlin +Merlin GeneMark.hmm mRNA 47485 47940 . + . ID=Merlin_53_mRNA;Parent=Merlin_53;seqid=Merlin +Merlin GeneMark.hmm exon 47485 47940 . + . ID=Merlin_53_exon;Parent=Merlin_53_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 47485 47940 . + 0 ID=Merlin_53_CDS;Parent=Merlin_53_exon;seqid=Merlin +Merlin GeneMark.hmm gene 47937 48143 -259.350499 + . ID=Merlin_54;seqid=Merlin +Merlin GeneMark.hmm mRNA 47937 48143 . + . ID=Merlin_54_mRNA;Parent=Merlin_54;seqid=Merlin +Merlin GeneMark.hmm exon 47937 48143 . + . ID=Merlin_54_exon;Parent=Merlin_54_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 47937 48143 . + 0 ID=Merlin_54_CDS;Parent=Merlin_54_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48140 48358 -277.240023 + . ID=Merlin_55;seqid=Merlin +Merlin GeneMark.hmm mRNA 48140 48358 . + . ID=Merlin_55_mRNA;Parent=Merlin_55;seqid=Merlin +Merlin GeneMark.hmm exon 48140 48358 . + . ID=Merlin_55_exon;Parent=Merlin_55_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48140 48358 . + 0 ID=Merlin_55_CDS;Parent=Merlin_55_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48418 48600 -230.583168 + . ID=Merlin_56;seqid=Merlin +Merlin GeneMark.hmm mRNA 48418 48600 . + . ID=Merlin_56_mRNA;Parent=Merlin_56;seqid=Merlin +Merlin GeneMark.hmm exon 48418 48600 . + . ID=Merlin_56_exon;Parent=Merlin_56_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48418 48600 . + 0 ID=Merlin_56_CDS;Parent=Merlin_56_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48584 48769 -232.687067 + . ID=Merlin_57;seqid=Merlin +Merlin GeneMark.hmm mRNA 48584 48769 . + . ID=Merlin_57_mRNA;Parent=Merlin_57;seqid=Merlin +Merlin GeneMark.hmm exon 48584 48769 . + . ID=Merlin_57_exon;Parent=Merlin_57_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48584 48769 . + 0 ID=Merlin_57_CDS;Parent=Merlin_57_exon;seqid=Merlin +Merlin GeneMark.hmm gene 48826 49053 -288.143395 + . ID=Merlin_58;seqid=Merlin +Merlin GeneMark.hmm mRNA 48826 49053 . + . ID=Merlin_58_mRNA;Parent=Merlin_58;seqid=Merlin +Merlin GeneMark.hmm exon 48826 49053 . + . ID=Merlin_58_exon;Parent=Merlin_58_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 48826 49053 . + 0 ID=Merlin_58_CDS;Parent=Merlin_58_exon;seqid=Merlin +Merlin GeneMark.hmm gene 49076 49432 -449.304895 + . ID=Merlin_59;seqid=Merlin +Merlin GeneMark.hmm mRNA 49076 49432 . + . ID=Merlin_59_mRNA;Parent=Merlin_59;seqid=Merlin +Merlin GeneMark.hmm exon 49076 49432 . + . ID=Merlin_59_exon;Parent=Merlin_59_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 49076 49432 . + 0 ID=Merlin_59_CDS;Parent=Merlin_59_exon;seqid=Merlin +Merlin GeneMark.hmm gene 49844 50110 -322.091381 + . ID=Merlin_60;seqid=Merlin +Merlin GeneMark.hmm mRNA 49844 50110 . + . ID=Merlin_60_mRNA;Parent=Merlin_60;seqid=Merlin +Merlin GeneMark.hmm exon 49844 50110 . + . ID=Merlin_60_exon;Parent=Merlin_60_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 49844 50110 . + 0 ID=Merlin_60_CDS;Parent=Merlin_60_exon;seqid=Merlin +Merlin GeneMark.hmm gene 50983 51234 -301.882768 + . ID=Merlin_61;seqid=Merlin +Merlin GeneMark.hmm mRNA 50983 51234 . + . ID=Merlin_61_mRNA;Parent=Merlin_61;seqid=Merlin +Merlin GeneMark.hmm exon 50983 51234 . + . ID=Merlin_61_exon;Parent=Merlin_61_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 50983 51234 . + 0 ID=Merlin_61_CDS;Parent=Merlin_61_exon;seqid=Merlin +Merlin GeneMark.hmm gene 51596 51838 -304.801536 + . ID=Merlin_62;seqid=Merlin +Merlin GeneMark.hmm mRNA 51596 51838 . + . ID=Merlin_62_mRNA;Parent=Merlin_62;seqid=Merlin +Merlin GeneMark.hmm exon 51596 51838 . + . ID=Merlin_62_exon;Parent=Merlin_62_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 51596 51838 . + 0 ID=Merlin_62_CDS;Parent=Merlin_62_exon;seqid=Merlin +Merlin GeneMark.hmm gene 51835 52182 -434.777109 + . ID=Merlin_63;seqid=Merlin +Merlin GeneMark.hmm mRNA 51835 52182 . + . ID=Merlin_63_mRNA;Parent=Merlin_63;seqid=Merlin +Merlin GeneMark.hmm exon 51835 52182 . + . ID=Merlin_63_exon;Parent=Merlin_63_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 51835 52182 . + 0 ID=Merlin_63_CDS;Parent=Merlin_63_exon;seqid=Merlin +Merlin GeneMark.hmm gene 52175 52684 -629.023983 + . ID=Merlin_64;seqid=Merlin +Merlin GeneMark.hmm mRNA 52175 52684 . + . ID=Merlin_64_mRNA;Parent=Merlin_64;seqid=Merlin +Merlin GeneMark.hmm exon 52175 52684 . + . ID=Merlin_64_exon;Parent=Merlin_64_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 52175 52684 . + 0 ID=Merlin_64_CDS;Parent=Merlin_64_exon;seqid=Merlin +Merlin GeneMark.hmm gene 52681 52827 -183.076828 + . ID=Merlin_65;seqid=Merlin +Merlin GeneMark.hmm mRNA 52681 52827 . + . ID=Merlin_65_mRNA;Parent=Merlin_65;seqid=Merlin +Merlin GeneMark.hmm exon 52681 52827 . + . ID=Merlin_65_exon;Parent=Merlin_65_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 52681 52827 . + 0 ID=Merlin_65_CDS;Parent=Merlin_65_exon;seqid=Merlin +Merlin GeneMark.hmm gene 52806 53030 -287.687980 + . ID=Merlin_66;seqid=Merlin +Merlin GeneMark.hmm mRNA 52806 53030 . + . ID=Merlin_66_mRNA;Parent=Merlin_66;seqid=Merlin +Merlin GeneMark.hmm exon 52806 53030 . + . ID=Merlin_66_exon;Parent=Merlin_66_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 52806 53030 . + 0 ID=Merlin_66_CDS;Parent=Merlin_66_exon;seqid=Merlin +Merlin GeneMark.hmm gene 53032 53475 -570.370348 + . ID=Merlin_67;seqid=Merlin +Merlin GeneMark.hmm mRNA 53032 53475 . + . ID=Merlin_67_mRNA;Parent=Merlin_67;seqid=Merlin +Merlin GeneMark.hmm exon 53032 53475 . + . ID=Merlin_67_exon;Parent=Merlin_67_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 53032 53475 . + 0 ID=Merlin_67_CDS;Parent=Merlin_67_exon;seqid=Merlin +Merlin GeneMark.hmm gene 53647 54225 -757.038069 + . ID=Merlin_68;seqid=Merlin +Merlin GeneMark.hmm mRNA 53647 54225 . + . ID=Merlin_68_mRNA;Parent=Merlin_68;seqid=Merlin +Merlin GeneMark.hmm exon 53647 54225 . + . ID=Merlin_68_exon;Parent=Merlin_68_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 53647 54225 . + 0 ID=Merlin_68_CDS;Parent=Merlin_68_exon;seqid=Merlin +Merlin GeneMark.hmm gene 54316 54516 -236.842212 + . ID=Merlin_69;seqid=Merlin +Merlin GeneMark.hmm mRNA 54316 54516 . + . ID=Merlin_69_mRNA;Parent=Merlin_69;seqid=Merlin +Merlin GeneMark.hmm exon 54316 54516 . + . ID=Merlin_69_exon;Parent=Merlin_69_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 54316 54516 . + 0 ID=Merlin_69_CDS;Parent=Merlin_69_exon;seqid=Merlin +Merlin GeneMark.hmm gene 54569 55168 -748.986136 + . ID=Merlin_70;seqid=Merlin +Merlin GeneMark.hmm mRNA 54569 55168 . + . ID=Merlin_70_mRNA;Parent=Merlin_70;seqid=Merlin +Merlin GeneMark.hmm exon 54569 55168 . + . ID=Merlin_70_exon;Parent=Merlin_70_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 54569 55168 . + 0 ID=Merlin_70_CDS;Parent=Merlin_70_exon;seqid=Merlin +Merlin GeneMark.hmm gene 55216 55860 -813.197162 + . ID=Merlin_71;seqid=Merlin +Merlin GeneMark.hmm mRNA 55216 55860 . + . ID=Merlin_71_mRNA;Parent=Merlin_71;seqid=Merlin +Merlin GeneMark.hmm exon 55216 55860 . + . ID=Merlin_71_exon;Parent=Merlin_71_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 55216 55860 . + 0 ID=Merlin_71_CDS;Parent=Merlin_71_exon;seqid=Merlin +Merlin GeneMark.hmm gene 55857 56279 -536.845669 + . ID=Merlin_72;seqid=Merlin +Merlin GeneMark.hmm mRNA 55857 56279 . + . ID=Merlin_72_mRNA;Parent=Merlin_72;seqid=Merlin +Merlin GeneMark.hmm exon 55857 56279 . + . ID=Merlin_72_exon;Parent=Merlin_72_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 55857 56279 . + 0 ID=Merlin_72_CDS;Parent=Merlin_72_exon;seqid=Merlin +Merlin GeneMark.hmm gene 56276 56644 -463.468418 + . ID=Merlin_73;seqid=Merlin +Merlin GeneMark.hmm mRNA 56276 56644 . + . ID=Merlin_73_mRNA;Parent=Merlin_73;seqid=Merlin +Merlin GeneMark.hmm exon 56276 56644 . + . ID=Merlin_73_exon;Parent=Merlin_73_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 56276 56644 . + 0 ID=Merlin_73_CDS;Parent=Merlin_73_exon;seqid=Merlin +Merlin GeneMark.hmm gene 56634 56894 -313.595651 + . ID=Merlin_74;seqid=Merlin +Merlin GeneMark.hmm mRNA 56634 56894 . + . ID=Merlin_74_mRNA;Parent=Merlin_74;seqid=Merlin +Merlin GeneMark.hmm exon 56634 56894 . + . ID=Merlin_74_exon;Parent=Merlin_74_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 56634 56894 . + 0 ID=Merlin_74_CDS;Parent=Merlin_74_exon;seqid=Merlin +Merlin GeneMark.hmm gene 56894 57172 -343.261028 + . ID=Merlin_75;seqid=Merlin +Merlin GeneMark.hmm mRNA 56894 57172 . + . ID=Merlin_75_mRNA;Parent=Merlin_75;seqid=Merlin +Merlin GeneMark.hmm exon 56894 57172 . + . ID=Merlin_75_exon;Parent=Merlin_75_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 56894 57172 . + 0 ID=Merlin_75_CDS;Parent=Merlin_75_exon;seqid=Merlin +Merlin GeneMark.hmm gene 57182 57403 -269.950515 + . ID=Merlin_76;seqid=Merlin +Merlin GeneMark.hmm mRNA 57182 57403 . + . ID=Merlin_76_mRNA;Parent=Merlin_76;seqid=Merlin +Merlin GeneMark.hmm exon 57182 57403 . + . ID=Merlin_76_exon;Parent=Merlin_76_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 57182 57403 . + 0 ID=Merlin_76_CDS;Parent=Merlin_76_exon;seqid=Merlin +Merlin GeneMark.hmm gene 57499 57786 -373.177871 + . ID=Merlin_77;seqid=Merlin +Merlin GeneMark.hmm mRNA 57499 57786 . + . ID=Merlin_77_mRNA;Parent=Merlin_77;seqid=Merlin +Merlin GeneMark.hmm exon 57499 57786 . + . ID=Merlin_77_exon;Parent=Merlin_77_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 57499 57786 . + 0 ID=Merlin_77_CDS;Parent=Merlin_77_exon;seqid=Merlin +Merlin GeneMark.hmm gene 57777 58724 -1215.940307 + . ID=Merlin_78;seqid=Merlin +Merlin GeneMark.hmm mRNA 57777 58724 . + . ID=Merlin_78_mRNA;Parent=Merlin_78;seqid=Merlin +Merlin GeneMark.hmm exon 57777 58724 . + . ID=Merlin_78_exon;Parent=Merlin_78_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 57777 58724 . + 0 ID=Merlin_78_CDS;Parent=Merlin_78_exon;seqid=Merlin +Merlin GeneMark.hmm gene 58717 58857 -173.930421 + . ID=Merlin_79;seqid=Merlin +Merlin GeneMark.hmm mRNA 58717 58857 . + . ID=Merlin_79_mRNA;Parent=Merlin_79;seqid=Merlin +Merlin GeneMark.hmm exon 58717 58857 . + . ID=Merlin_79_exon;Parent=Merlin_79_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 58717 58857 . + 0 ID=Merlin_79_CDS;Parent=Merlin_79_exon;seqid=Merlin +Merlin GeneMark.hmm gene 58872 59561 -880.645375 + . ID=Merlin_80;seqid=Merlin +Merlin GeneMark.hmm mRNA 58872 59561 . + . ID=Merlin_80_mRNA;Parent=Merlin_80;seqid=Merlin +Merlin GeneMark.hmm exon 58872 59561 . + . ID=Merlin_80_exon;Parent=Merlin_80_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 58872 59561 . + 0 ID=Merlin_80_CDS;Parent=Merlin_80_exon;seqid=Merlin +Merlin GeneMark.hmm gene 59561 59899 -428.109831 + . ID=Merlin_81;seqid=Merlin +Merlin GeneMark.hmm mRNA 59561 59899 . + . ID=Merlin_81_mRNA;Parent=Merlin_81;seqid=Merlin +Merlin GeneMark.hmm exon 59561 59899 . + . ID=Merlin_81_exon;Parent=Merlin_81_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 59561 59899 . + 0 ID=Merlin_81_CDS;Parent=Merlin_81_exon;seqid=Merlin +Merlin GeneMark.hmm gene 59896 60144 -306.923987 + . ID=Merlin_82;seqid=Merlin +Merlin GeneMark.hmm mRNA 59896 60144 . + . ID=Merlin_82_mRNA;Parent=Merlin_82;seqid=Merlin +Merlin GeneMark.hmm exon 59896 60144 . + . ID=Merlin_82_exon;Parent=Merlin_82_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 59896 60144 . + 0 ID=Merlin_82_CDS;Parent=Merlin_82_exon;seqid=Merlin +Merlin GeneMark.hmm gene 60144 60386 -304.982653 + . ID=Merlin_83;seqid=Merlin +Merlin GeneMark.hmm mRNA 60144 60386 . + . ID=Merlin_83_mRNA;Parent=Merlin_83;seqid=Merlin +Merlin GeneMark.hmm exon 60144 60386 . + . ID=Merlin_83_exon;Parent=Merlin_83_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 60144 60386 . + 0 ID=Merlin_83_CDS;Parent=Merlin_83_exon;seqid=Merlin +Merlin GeneMark.hmm gene 60379 60840 -594.547870 + . ID=Merlin_84;seqid=Merlin +Merlin GeneMark.hmm mRNA 60379 60840 . + . ID=Merlin_84_mRNA;Parent=Merlin_84;seqid=Merlin +Merlin GeneMark.hmm exon 60379 60840 . + . ID=Merlin_84_exon;Parent=Merlin_84_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 60379 60840 . + 0 ID=Merlin_84_CDS;Parent=Merlin_84_exon;seqid=Merlin +Merlin GeneMark.hmm gene 60869 61369 -617.611500 + . ID=Merlin_85;seqid=Merlin +Merlin GeneMark.hmm mRNA 60869 61369 . + . ID=Merlin_85_mRNA;Parent=Merlin_85;seqid=Merlin +Merlin GeneMark.hmm exon 60869 61369 . + . ID=Merlin_85_exon;Parent=Merlin_85_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 60869 61369 . + 0 ID=Merlin_85_CDS;Parent=Merlin_85_exon;seqid=Merlin +Merlin GeneMark.hmm gene 61356 61703 -422.353181 + . ID=Merlin_86;seqid=Merlin +Merlin GeneMark.hmm mRNA 61356 61703 . + . ID=Merlin_86_mRNA;Parent=Merlin_86;seqid=Merlin +Merlin GeneMark.hmm exon 61356 61703 . + . ID=Merlin_86_exon;Parent=Merlin_86_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 61356 61703 . + 0 ID=Merlin_86_CDS;Parent=Merlin_86_exon;seqid=Merlin +Merlin GeneMark.hmm gene 61760 62167 -519.180141 + . ID=Merlin_87;seqid=Merlin +Merlin GeneMark.hmm mRNA 61760 62167 . + . ID=Merlin_87_mRNA;Parent=Merlin_87;seqid=Merlin +Merlin GeneMark.hmm exon 61760 62167 . + . ID=Merlin_87_exon;Parent=Merlin_87_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 61760 62167 . + 0 ID=Merlin_87_CDS;Parent=Merlin_87_exon;seqid=Merlin +Merlin GeneMark.hmm gene 62359 62889 -691.422401 + . ID=Merlin_88;seqid=Merlin +Merlin GeneMark.hmm mRNA 62359 62889 . + . ID=Merlin_88_mRNA;Parent=Merlin_88;seqid=Merlin +Merlin GeneMark.hmm exon 62359 62889 . + . ID=Merlin_88_exon;Parent=Merlin_88_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 62359 62889 . + 0 ID=Merlin_88_CDS;Parent=Merlin_88_exon;seqid=Merlin +Merlin GeneMark.hmm gene 62886 63131 -315.050979 + . ID=Merlin_89;seqid=Merlin +Merlin GeneMark.hmm mRNA 62886 63131 . + . ID=Merlin_89_mRNA;Parent=Merlin_89;seqid=Merlin +Merlin GeneMark.hmm exon 62886 63131 . + . ID=Merlin_89_exon;Parent=Merlin_89_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 62886 63131 . + 0 ID=Merlin_89_CDS;Parent=Merlin_89_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63124 63435 -400.565460 + . ID=Merlin_90;seqid=Merlin +Merlin GeneMark.hmm mRNA 63124 63435 . + . ID=Merlin_90_mRNA;Parent=Merlin_90;seqid=Merlin +Merlin GeneMark.hmm exon 63124 63435 . + . ID=Merlin_90_exon;Parent=Merlin_90_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63124 63435 . + 0 ID=Merlin_90_CDS;Parent=Merlin_90_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63432 63710 -335.031911 + . ID=Merlin_91;seqid=Merlin +Merlin GeneMark.hmm mRNA 63432 63710 . + . ID=Merlin_91_mRNA;Parent=Merlin_91;seqid=Merlin +Merlin GeneMark.hmm exon 63432 63710 . + . ID=Merlin_91_exon;Parent=Merlin_91_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63432 63710 . + 0 ID=Merlin_91_CDS;Parent=Merlin_91_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63710 63883 -203.175066 + . ID=Merlin_92;seqid=Merlin +Merlin GeneMark.hmm mRNA 63710 63883 . + . ID=Merlin_92_mRNA;Parent=Merlin_92;seqid=Merlin +Merlin GeneMark.hmm exon 63710 63883 . + . ID=Merlin_92_exon;Parent=Merlin_92_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63710 63883 . + 0 ID=Merlin_92_CDS;Parent=Merlin_92_exon;seqid=Merlin +Merlin GeneMark.hmm gene 63942 64406 -597.655245 + . ID=Merlin_93;seqid=Merlin +Merlin GeneMark.hmm mRNA 63942 64406 . + . ID=Merlin_93_mRNA;Parent=Merlin_93;seqid=Merlin +Merlin GeneMark.hmm exon 63942 64406 . + . ID=Merlin_93_exon;Parent=Merlin_93_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 63942 64406 . + 0 ID=Merlin_93_CDS;Parent=Merlin_93_exon;seqid=Merlin +Merlin GeneMark.hmm gene 64414 64962 -713.810677 + . ID=Merlin_94;seqid=Merlin +Merlin GeneMark.hmm mRNA 64414 64962 . + . ID=Merlin_94_mRNA;Parent=Merlin_94;seqid=Merlin +Merlin GeneMark.hmm exon 64414 64962 . + . ID=Merlin_94_exon;Parent=Merlin_94_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 64414 64962 . + 0 ID=Merlin_94_CDS;Parent=Merlin_94_exon;seqid=Merlin +Merlin GeneMark.hmm gene 64962 65282 -412.685055 + . ID=Merlin_95;seqid=Merlin +Merlin GeneMark.hmm mRNA 64962 65282 . + . ID=Merlin_95_mRNA;Parent=Merlin_95;seqid=Merlin +Merlin GeneMark.hmm exon 64962 65282 . + . ID=Merlin_95_exon;Parent=Merlin_95_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 64962 65282 . + 0 ID=Merlin_95_CDS;Parent=Merlin_95_exon;seqid=Merlin +Merlin GeneMark.hmm gene 65303 65683 -496.639498 + . ID=Merlin_96;seqid=Merlin +Merlin GeneMark.hmm mRNA 65303 65683 . + . ID=Merlin_96_mRNA;Parent=Merlin_96;seqid=Merlin +Merlin GeneMark.hmm exon 65303 65683 . + . ID=Merlin_96_exon;Parent=Merlin_96_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 65303 65683 . + 0 ID=Merlin_96_CDS;Parent=Merlin_96_exon;seqid=Merlin +Merlin GeneMark.hmm gene 65676 66128 -573.822848 + . ID=Merlin_97;seqid=Merlin +Merlin GeneMark.hmm mRNA 65676 66128 . + . ID=Merlin_97_mRNA;Parent=Merlin_97;seqid=Merlin +Merlin GeneMark.hmm exon 65676 66128 . + . ID=Merlin_97_exon;Parent=Merlin_97_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 65676 66128 . + 0 ID=Merlin_97_CDS;Parent=Merlin_97_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66128 66337 -267.423513 + . ID=Merlin_98;seqid=Merlin +Merlin GeneMark.hmm mRNA 66128 66337 . + . ID=Merlin_98_mRNA;Parent=Merlin_98;seqid=Merlin +Merlin GeneMark.hmm exon 66128 66337 . + . ID=Merlin_98_exon;Parent=Merlin_98_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66128 66337 . + 0 ID=Merlin_98_CDS;Parent=Merlin_98_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66328 66507 -214.194539 + . ID=Merlin_99;seqid=Merlin +Merlin GeneMark.hmm mRNA 66328 66507 . + . ID=Merlin_99_mRNA;Parent=Merlin_99;seqid=Merlin +Merlin GeneMark.hmm exon 66328 66507 . + . ID=Merlin_99_exon;Parent=Merlin_99_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66328 66507 . + 0 ID=Merlin_99_CDS;Parent=Merlin_99_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66504 66683 -217.450578 + . ID=Merlin_100;seqid=Merlin +Merlin GeneMark.hmm mRNA 66504 66683 . + . ID=Merlin_100_mRNA;Parent=Merlin_100;seqid=Merlin +Merlin GeneMark.hmm exon 66504 66683 . + . ID=Merlin_100_exon;Parent=Merlin_100_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66504 66683 . + 0 ID=Merlin_100_CDS;Parent=Merlin_100_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66680 66871 -235.908196 + . ID=Merlin_101;seqid=Merlin +Merlin GeneMark.hmm mRNA 66680 66871 . + . ID=Merlin_101_mRNA;Parent=Merlin_101;seqid=Merlin +Merlin GeneMark.hmm exon 66680 66871 . + . ID=Merlin_101_exon;Parent=Merlin_101_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66680 66871 . + 0 ID=Merlin_101_CDS;Parent=Merlin_101_exon;seqid=Merlin +Merlin GeneMark.hmm gene 66873 67058 -233.275820 + . ID=Merlin_102;seqid=Merlin +Merlin GeneMark.hmm mRNA 66873 67058 . + . ID=Merlin_102_mRNA;Parent=Merlin_102;seqid=Merlin +Merlin GeneMark.hmm exon 66873 67058 . + . ID=Merlin_102_exon;Parent=Merlin_102_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 66873 67058 . + 0 ID=Merlin_102_CDS;Parent=Merlin_102_exon;seqid=Merlin +Merlin GeneMark.hmm gene 67058 67267 -264.096823 + . ID=Merlin_103;seqid=Merlin +Merlin GeneMark.hmm mRNA 67058 67267 . + . ID=Merlin_103_mRNA;Parent=Merlin_103;seqid=Merlin +Merlin GeneMark.hmm exon 67058 67267 . + . ID=Merlin_103_exon;Parent=Merlin_103_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 67058 67267 . + 0 ID=Merlin_103_CDS;Parent=Merlin_103_exon;seqid=Merlin +Merlin GeneMark.hmm gene 67267 67845 -752.300357 + . ID=Merlin_104;seqid=Merlin +Merlin GeneMark.hmm mRNA 67267 67845 . + . ID=Merlin_104_mRNA;Parent=Merlin_104;seqid=Merlin +Merlin GeneMark.hmm exon 67267 67845 . + . ID=Merlin_104_exon;Parent=Merlin_104_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 67267 67845 . + 0 ID=Merlin_104_CDS;Parent=Merlin_104_exon;seqid=Merlin +Merlin GeneMark.hmm gene 67970 68128 -196.227328 + . ID=Merlin_105;seqid=Merlin +Merlin GeneMark.hmm mRNA 67970 68128 . + . ID=Merlin_105_mRNA;Parent=Merlin_105;seqid=Merlin +Merlin GeneMark.hmm exon 67970 68128 . + . ID=Merlin_105_exon;Parent=Merlin_105_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 67970 68128 . + 0 ID=Merlin_105_CDS;Parent=Merlin_105_exon;seqid=Merlin +Merlin GeneMark.hmm gene 68125 68280 -186.665512 + . ID=Merlin_106;seqid=Merlin +Merlin GeneMark.hmm mRNA 68125 68280 . + . ID=Merlin_106_mRNA;Parent=Merlin_106;seqid=Merlin +Merlin GeneMark.hmm exon 68125 68280 . + . ID=Merlin_106_exon;Parent=Merlin_106_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 68125 68280 . + 0 ID=Merlin_106_CDS;Parent=Merlin_106_exon;seqid=Merlin +Merlin GeneMark.hmm gene 68345 68728 -480.408576 + . ID=Merlin_107;seqid=Merlin +Merlin GeneMark.hmm mRNA 68345 68728 . + . ID=Merlin_107_mRNA;Parent=Merlin_107;seqid=Merlin +Merlin GeneMark.hmm exon 68345 68728 . + . ID=Merlin_107_exon;Parent=Merlin_107_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 68345 68728 . + 0 ID=Merlin_107_CDS;Parent=Merlin_107_exon;seqid=Merlin +Merlin GeneMark.hmm gene 68787 68999 -267.936260 + . ID=Merlin_108;seqid=Merlin +Merlin GeneMark.hmm mRNA 68787 68999 . + . ID=Merlin_108_mRNA;Parent=Merlin_108;seqid=Merlin +Merlin GeneMark.hmm exon 68787 68999 . + . ID=Merlin_108_exon;Parent=Merlin_108_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 68787 68999 . + 0 ID=Merlin_108_CDS;Parent=Merlin_108_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69008 69295 -369.655354 + . ID=Merlin_109;seqid=Merlin +Merlin GeneMark.hmm mRNA 69008 69295 . + . ID=Merlin_109_mRNA;Parent=Merlin_109;seqid=Merlin +Merlin GeneMark.hmm exon 69008 69295 . + . ID=Merlin_109_exon;Parent=Merlin_109_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69008 69295 . + 0 ID=Merlin_109_CDS;Parent=Merlin_109_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69285 69668 -486.207714 + . ID=Merlin_110;seqid=Merlin +Merlin GeneMark.hmm mRNA 69285 69668 . + . ID=Merlin_110_mRNA;Parent=Merlin_110;seqid=Merlin +Merlin GeneMark.hmm exon 69285 69668 . + . ID=Merlin_110_exon;Parent=Merlin_110_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69285 69668 . + 0 ID=Merlin_110_CDS;Parent=Merlin_110_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69767 69862 -119.090489 + . ID=Merlin_111;seqid=Merlin +Merlin GeneMark.hmm mRNA 69767 69862 . + . ID=Merlin_111_mRNA;Parent=Merlin_111;seqid=Merlin +Merlin GeneMark.hmm exon 69767 69862 . + . ID=Merlin_111_exon;Parent=Merlin_111_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69767 69862 . + 0 ID=Merlin_111_CDS;Parent=Merlin_111_exon;seqid=Merlin +Merlin GeneMark.hmm gene 69859 70023 -200.738602 + . ID=Merlin_112;seqid=Merlin +Merlin GeneMark.hmm mRNA 69859 70023 . + . ID=Merlin_112_mRNA;Parent=Merlin_112;seqid=Merlin +Merlin GeneMark.hmm exon 69859 70023 . + . ID=Merlin_112_exon;Parent=Merlin_112_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 69859 70023 . + 0 ID=Merlin_112_CDS;Parent=Merlin_112_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70030 70263 -281.446786 + . ID=Merlin_113;seqid=Merlin +Merlin GeneMark.hmm mRNA 70030 70263 . + . ID=Merlin_113_mRNA;Parent=Merlin_113;seqid=Merlin +Merlin GeneMark.hmm exon 70030 70263 . + . ID=Merlin_113_exon;Parent=Merlin_113_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70030 70263 . + 0 ID=Merlin_113_CDS;Parent=Merlin_113_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70263 70520 -332.653168 + . ID=Merlin_114;seqid=Merlin +Merlin GeneMark.hmm mRNA 70263 70520 . + . ID=Merlin_114_mRNA;Parent=Merlin_114;seqid=Merlin +Merlin GeneMark.hmm exon 70263 70520 . + . ID=Merlin_114_exon;Parent=Merlin_114_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70263 70520 . + 0 ID=Merlin_114_CDS;Parent=Merlin_114_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70517 70780 -336.190173 + . ID=Merlin_115;seqid=Merlin +Merlin GeneMark.hmm mRNA 70517 70780 . + . ID=Merlin_115_mRNA;Parent=Merlin_115;seqid=Merlin +Merlin GeneMark.hmm exon 70517 70780 . + . ID=Merlin_115_exon;Parent=Merlin_115_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70517 70780 . + 0 ID=Merlin_115_CDS;Parent=Merlin_115_exon;seqid=Merlin +Merlin GeneMark.hmm gene 70866 71102 -289.943350 + . ID=Merlin_116;seqid=Merlin +Merlin GeneMark.hmm mRNA 70866 71102 . + . ID=Merlin_116_mRNA;Parent=Merlin_116;seqid=Merlin +Merlin GeneMark.hmm exon 70866 71102 . + . ID=Merlin_116_exon;Parent=Merlin_116_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 70866 71102 . + 0 ID=Merlin_116_CDS;Parent=Merlin_116_exon;seqid=Merlin +Merlin GeneMark.hmm gene 71092 71571 -594.658724 + . ID=Merlin_117;seqid=Merlin +Merlin GeneMark.hmm mRNA 71092 71571 . + . ID=Merlin_117_mRNA;Parent=Merlin_117;seqid=Merlin +Merlin GeneMark.hmm exon 71092 71571 . + . ID=Merlin_117_exon;Parent=Merlin_117_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 71092 71571 . + 0 ID=Merlin_117_CDS;Parent=Merlin_117_exon;seqid=Merlin +Merlin GeneMark.hmm gene 71574 72116 -686.096724 + . ID=Merlin_118;seqid=Merlin +Merlin GeneMark.hmm mRNA 71574 72116 . + . ID=Merlin_118_mRNA;Parent=Merlin_118;seqid=Merlin +Merlin GeneMark.hmm exon 71574 72116 . + . ID=Merlin_118_exon;Parent=Merlin_118_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 71574 72116 . + 0 ID=Merlin_118_CDS;Parent=Merlin_118_exon;seqid=Merlin +Merlin GeneMark.hmm gene 72116 73126 -1269.074513 + . ID=Merlin_119;seqid=Merlin +Merlin GeneMark.hmm mRNA 72116 73126 . + . ID=Merlin_119_mRNA;Parent=Merlin_119;seqid=Merlin +Merlin GeneMark.hmm exon 72116 73126 . + . ID=Merlin_119_exon;Parent=Merlin_119_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 72116 73126 . + 0 ID=Merlin_119_CDS;Parent=Merlin_119_exon;seqid=Merlin +Merlin GeneMark.hmm gene 73123 73359 -314.305354 + . ID=Merlin_120;seqid=Merlin +Merlin GeneMark.hmm mRNA 73123 73359 . + . ID=Merlin_120_mRNA;Parent=Merlin_120;seqid=Merlin +Merlin GeneMark.hmm exon 73123 73359 . + . ID=Merlin_120_exon;Parent=Merlin_120_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 73123 73359 . + 0 ID=Merlin_120_CDS;Parent=Merlin_120_exon;seqid=Merlin +Merlin GeneMark.hmm gene 73461 73631 -201.815396 + . ID=Merlin_121;seqid=Merlin +Merlin GeneMark.hmm mRNA 73461 73631 . + . ID=Merlin_121_mRNA;Parent=Merlin_121;seqid=Merlin +Merlin GeneMark.hmm exon 73461 73631 . + . ID=Merlin_121_exon;Parent=Merlin_121_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 73461 73631 . + 0 ID=Merlin_121_CDS;Parent=Merlin_121_exon;seqid=Merlin +Merlin GeneMark.hmm gene 73721 74698 -1210.601194 + . ID=Merlin_122;seqid=Merlin +Merlin GeneMark.hmm mRNA 73721 74698 . + . ID=Merlin_122_mRNA;Parent=Merlin_122;seqid=Merlin +Merlin GeneMark.hmm exon 73721 74698 . + . ID=Merlin_122_exon;Parent=Merlin_122_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 73721 74698 . + 0 ID=Merlin_122_CDS;Parent=Merlin_122_exon;seqid=Merlin +Merlin GeneMark.hmm gene 74744 74893 -185.633773 + . ID=Merlin_123;seqid=Merlin +Merlin GeneMark.hmm mRNA 74744 74893 . + . ID=Merlin_123_mRNA;Parent=Merlin_123;seqid=Merlin +Merlin GeneMark.hmm exon 74744 74893 . + . ID=Merlin_123_exon;Parent=Merlin_123_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 74744 74893 . + 0 ID=Merlin_123_CDS;Parent=Merlin_123_exon;seqid=Merlin +Merlin GeneMark.hmm gene 74890 75141 -315.506963 + . ID=Merlin_124;seqid=Merlin +Merlin GeneMark.hmm mRNA 74890 75141 . + . ID=Merlin_124_mRNA;Parent=Merlin_124;seqid=Merlin +Merlin GeneMark.hmm exon 74890 75141 . + . ID=Merlin_124_exon;Parent=Merlin_124_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 74890 75141 . + 0 ID=Merlin_124_CDS;Parent=Merlin_124_exon;seqid=Merlin +Merlin GeneMark.hmm gene 75141 75602 -594.209518 + . ID=Merlin_125;seqid=Merlin +Merlin GeneMark.hmm mRNA 75141 75602 . + . ID=Merlin_125_mRNA;Parent=Merlin_125;seqid=Merlin +Merlin GeneMark.hmm exon 75141 75602 . + . ID=Merlin_125_exon;Parent=Merlin_125_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 75141 75602 . + 0 ID=Merlin_125_CDS;Parent=Merlin_125_exon;seqid=Merlin +Merlin GeneMark.hmm gene 75602 75865 -344.721707 + . ID=Merlin_126;seqid=Merlin +Merlin GeneMark.hmm mRNA 75602 75865 . + . ID=Merlin_126_mRNA;Parent=Merlin_126;seqid=Merlin +Merlin GeneMark.hmm exon 75602 75865 . + . ID=Merlin_126_exon;Parent=Merlin_126_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 75602 75865 . + 0 ID=Merlin_126_CDS;Parent=Merlin_126_exon;seqid=Merlin +Merlin GeneMark.hmm gene 75856 76044 -230.523164 + . ID=Merlin_127;seqid=Merlin +Merlin GeneMark.hmm mRNA 75856 76044 . + . ID=Merlin_127_mRNA;Parent=Merlin_127;seqid=Merlin +Merlin GeneMark.hmm exon 75856 76044 . + . ID=Merlin_127_exon;Parent=Merlin_127_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 75856 76044 . + 0 ID=Merlin_127_CDS;Parent=Merlin_127_exon;seqid=Merlin +Merlin GeneMark.hmm gene 76041 76367 -416.228479 + . ID=Merlin_128;seqid=Merlin +Merlin GeneMark.hmm mRNA 76041 76367 . + . ID=Merlin_128_mRNA;Parent=Merlin_128;seqid=Merlin +Merlin GeneMark.hmm exon 76041 76367 . + . ID=Merlin_128_exon;Parent=Merlin_128_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 76041 76367 . + 0 ID=Merlin_128_CDS;Parent=Merlin_128_exon;seqid=Merlin +Merlin GeneMark.hmm gene 76546 77334 -987.711287 + . ID=Merlin_129;seqid=Merlin +Merlin GeneMark.hmm mRNA 76546 77334 . + . ID=Merlin_129_mRNA;Parent=Merlin_129;seqid=Merlin +Merlin GeneMark.hmm exon 76546 77334 . + . ID=Merlin_129_exon;Parent=Merlin_129_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 76546 77334 . + 0 ID=Merlin_129_CDS;Parent=Merlin_129_exon;seqid=Merlin +Merlin GeneMark.hmm gene 77420 78424 -1261.524373 + . ID=Merlin_130;seqid=Merlin +Merlin GeneMark.hmm mRNA 77420 78424 . + . ID=Merlin_130_mRNA;Parent=Merlin_130;seqid=Merlin +Merlin GeneMark.hmm exon 77420 78424 . + . ID=Merlin_130_exon;Parent=Merlin_130_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 77420 78424 . + 0 ID=Merlin_130_CDS;Parent=Merlin_130_exon;seqid=Merlin +Merlin GeneMark.hmm gene 78417 78707 -360.350742 + . ID=Merlin_131;seqid=Merlin +Merlin GeneMark.hmm mRNA 78417 78707 . + . ID=Merlin_131_mRNA;Parent=Merlin_131;seqid=Merlin +Merlin GeneMark.hmm exon 78417 78707 . + . ID=Merlin_131_exon;Parent=Merlin_131_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 78417 78707 . + 0 ID=Merlin_131_CDS;Parent=Merlin_131_exon;seqid=Merlin +Merlin GeneMark.hmm gene 78704 79111 -518.845840 + . ID=Merlin_132;seqid=Merlin +Merlin GeneMark.hmm mRNA 78704 79111 . + . ID=Merlin_132_mRNA;Parent=Merlin_132;seqid=Merlin +Merlin GeneMark.hmm exon 78704 79111 . + . ID=Merlin_132_exon;Parent=Merlin_132_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 78704 79111 . + 0 ID=Merlin_132_CDS;Parent=Merlin_132_exon;seqid=Merlin +Merlin GeneMark.hmm gene 79111 79617 -613.282382 + . ID=Merlin_133;seqid=Merlin +Merlin GeneMark.hmm mRNA 79111 79617 . + . ID=Merlin_133_mRNA;Parent=Merlin_133;seqid=Merlin +Merlin GeneMark.hmm exon 79111 79617 . + . ID=Merlin_133_exon;Parent=Merlin_133_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 79111 79617 . + 0 ID=Merlin_133_CDS;Parent=Merlin_133_exon;seqid=Merlin +Merlin GeneMark.hmm gene 79614 79919 -369.305081 + . ID=Merlin_134;seqid=Merlin +Merlin GeneMark.hmm mRNA 79614 79919 . + . ID=Merlin_134_mRNA;Parent=Merlin_134;seqid=Merlin +Merlin GeneMark.hmm exon 79614 79919 . + . ID=Merlin_134_exon;Parent=Merlin_134_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 79614 79919 . + 0 ID=Merlin_134_CDS;Parent=Merlin_134_exon;seqid=Merlin +Merlin GeneMark.hmm gene 79933 80160 -288.575732 + . ID=Merlin_135;seqid=Merlin +Merlin GeneMark.hmm mRNA 79933 80160 . + . ID=Merlin_135_mRNA;Parent=Merlin_135;seqid=Merlin +Merlin GeneMark.hmm exon 79933 80160 . + . ID=Merlin_135_exon;Parent=Merlin_135_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 79933 80160 . + 0 ID=Merlin_135_CDS;Parent=Merlin_135_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80154 80417 -324.958009 + . ID=Merlin_136;seqid=Merlin +Merlin GeneMark.hmm mRNA 80154 80417 . + . ID=Merlin_136_mRNA;Parent=Merlin_136;seqid=Merlin +Merlin GeneMark.hmm exon 80154 80417 . + . ID=Merlin_136_exon;Parent=Merlin_136_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80154 80417 . + 0 ID=Merlin_136_CDS;Parent=Merlin_136_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80414 80623 -254.916892 + . ID=Merlin_137;seqid=Merlin +Merlin GeneMark.hmm mRNA 80414 80623 . + . ID=Merlin_137_mRNA;Parent=Merlin_137;seqid=Merlin +Merlin GeneMark.hmm exon 80414 80623 . + . ID=Merlin_137_exon;Parent=Merlin_137_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80414 80623 . + 0 ID=Merlin_137_CDS;Parent=Merlin_137_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80620 80949 -405.138197 + . ID=Merlin_138;seqid=Merlin +Merlin GeneMark.hmm mRNA 80620 80949 . + . ID=Merlin_138_mRNA;Parent=Merlin_138;seqid=Merlin +Merlin GeneMark.hmm exon 80620 80949 . + . ID=Merlin_138_exon;Parent=Merlin_138_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80620 80949 . + 0 ID=Merlin_138_CDS;Parent=Merlin_138_exon;seqid=Merlin +Merlin GeneMark.hmm gene 80939 81091 -189.705268 + . ID=Merlin_139;seqid=Merlin +Merlin GeneMark.hmm mRNA 80939 81091 . + . ID=Merlin_139_mRNA;Parent=Merlin_139;seqid=Merlin +Merlin GeneMark.hmm exon 80939 81091 . + . ID=Merlin_139_exon;Parent=Merlin_139_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 80939 81091 . + 0 ID=Merlin_139_CDS;Parent=Merlin_139_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81088 81396 -379.041172 + . ID=Merlin_140;seqid=Merlin +Merlin GeneMark.hmm mRNA 81088 81396 . + . ID=Merlin_140_mRNA;Parent=Merlin_140;seqid=Merlin +Merlin GeneMark.hmm exon 81088 81396 . + . ID=Merlin_140_exon;Parent=Merlin_140_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81088 81396 . + 0 ID=Merlin_140_CDS;Parent=Merlin_140_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81381 81527 -178.904000 + . ID=Merlin_141;seqid=Merlin +Merlin GeneMark.hmm mRNA 81381 81527 . + . ID=Merlin_141_mRNA;Parent=Merlin_141;seqid=Merlin +Merlin GeneMark.hmm exon 81381 81527 . + . ID=Merlin_141_exon;Parent=Merlin_141_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81381 81527 . + 0 ID=Merlin_141_CDS;Parent=Merlin_141_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81511 81945 -531.842575 + . ID=Merlin_142;seqid=Merlin +Merlin GeneMark.hmm mRNA 81511 81945 . + . ID=Merlin_142_mRNA;Parent=Merlin_142;seqid=Merlin +Merlin GeneMark.hmm exon 81511 81945 . + . ID=Merlin_142_exon;Parent=Merlin_142_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81511 81945 . + 0 ID=Merlin_142_CDS;Parent=Merlin_142_exon;seqid=Merlin +Merlin GeneMark.hmm gene 81945 82109 -200.193240 + . ID=Merlin_143;seqid=Merlin +Merlin GeneMark.hmm mRNA 81945 82109 . + . ID=Merlin_143_mRNA;Parent=Merlin_143;seqid=Merlin +Merlin GeneMark.hmm exon 81945 82109 . + . ID=Merlin_143_exon;Parent=Merlin_143_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 81945 82109 . + 0 ID=Merlin_143_CDS;Parent=Merlin_143_exon;seqid=Merlin +Merlin GeneMark.hmm gene 82145 82618 -597.711728 + . ID=Merlin_144;seqid=Merlin +Merlin GeneMark.hmm mRNA 82145 82618 . + . ID=Merlin_144_mRNA;Parent=Merlin_144;seqid=Merlin +Merlin GeneMark.hmm exon 82145 82618 . + . ID=Merlin_144_exon;Parent=Merlin_144_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 82145 82618 . + 0 ID=Merlin_144_CDS;Parent=Merlin_144_exon;seqid=Merlin +Merlin GeneMark.hmm gene 82615 84444 -2332.730592 + . ID=Merlin_145;seqid=Merlin +Merlin GeneMark.hmm mRNA 82615 84444 . + . ID=Merlin_145_mRNA;Parent=Merlin_145;seqid=Merlin +Merlin GeneMark.hmm exon 82615 84444 . + . ID=Merlin_145_exon;Parent=Merlin_145_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 82615 84444 . + 0 ID=Merlin_145_CDS;Parent=Merlin_145_exon;seqid=Merlin +Merlin GeneMark.hmm gene 84512 84928 -529.993287 + . ID=Merlin_146;seqid=Merlin +Merlin GeneMark.hmm mRNA 84512 84928 . + . ID=Merlin_146_mRNA;Parent=Merlin_146;seqid=Merlin +Merlin GeneMark.hmm exon 84512 84928 . + . ID=Merlin_146_exon;Parent=Merlin_146_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 84512 84928 . + 0 ID=Merlin_146_CDS;Parent=Merlin_146_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85016 85309 -372.795932 + . ID=Merlin_147;seqid=Merlin +Merlin GeneMark.hmm mRNA 85016 85309 . + . ID=Merlin_147_mRNA;Parent=Merlin_147;seqid=Merlin +Merlin GeneMark.hmm exon 85016 85309 . + . ID=Merlin_147_exon;Parent=Merlin_147_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85016 85309 . + 0 ID=Merlin_147_CDS;Parent=Merlin_147_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85459 85722 -330.097448 + . ID=Merlin_148;seqid=Merlin +Merlin GeneMark.hmm mRNA 85459 85722 . + . ID=Merlin_148_mRNA;Parent=Merlin_148;seqid=Merlin +Merlin GeneMark.hmm exon 85459 85722 . + . ID=Merlin_148_exon;Parent=Merlin_148_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85459 85722 . + 0 ID=Merlin_148_CDS;Parent=Merlin_148_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85722 85910 -230.155567 + . ID=Merlin_149;seqid=Merlin +Merlin GeneMark.hmm mRNA 85722 85910 . + . ID=Merlin_149_mRNA;Parent=Merlin_149;seqid=Merlin +Merlin GeneMark.hmm exon 85722 85910 . + . ID=Merlin_149_exon;Parent=Merlin_149_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85722 85910 . + 0 ID=Merlin_149_CDS;Parent=Merlin_149_exon;seqid=Merlin +Merlin GeneMark.hmm gene 85903 86166 -332.190142 + . ID=Merlin_150;seqid=Merlin +Merlin GeneMark.hmm mRNA 85903 86166 . + . ID=Merlin_150_mRNA;Parent=Merlin_150;seqid=Merlin +Merlin GeneMark.hmm exon 85903 86166 . + . ID=Merlin_150_exon;Parent=Merlin_150_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 85903 86166 . + 0 ID=Merlin_150_CDS;Parent=Merlin_150_exon;seqid=Merlin +Merlin GeneMark.hmm gene 86229 86555 -399.176919 + . ID=Merlin_151;seqid=Merlin +Merlin GeneMark.hmm mRNA 86229 86555 . + . ID=Merlin_151_mRNA;Parent=Merlin_151;seqid=Merlin +Merlin GeneMark.hmm exon 86229 86555 . + . ID=Merlin_151_exon;Parent=Merlin_151_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 86229 86555 . + 0 ID=Merlin_151_CDS;Parent=Merlin_151_exon;seqid=Merlin +Merlin GeneMark.hmm gene 86552 86833 -365.746982 + . ID=Merlin_152;seqid=Merlin +Merlin GeneMark.hmm mRNA 86552 86833 . + . ID=Merlin_152_mRNA;Parent=Merlin_152;seqid=Merlin +Merlin GeneMark.hmm exon 86552 86833 . + . ID=Merlin_152_exon;Parent=Merlin_152_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 86552 86833 . + 0 ID=Merlin_152_CDS;Parent=Merlin_152_exon;seqid=Merlin +Merlin GeneMark.hmm gene 86826 87074 -314.427851 + . ID=Merlin_153;seqid=Merlin +Merlin GeneMark.hmm mRNA 86826 87074 . + . ID=Merlin_153_mRNA;Parent=Merlin_153;seqid=Merlin +Merlin GeneMark.hmm exon 86826 87074 . + . ID=Merlin_153_exon;Parent=Merlin_153_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 86826 87074 . + 0 ID=Merlin_153_CDS;Parent=Merlin_153_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87067 87291 -270.187122 + . ID=Merlin_154;seqid=Merlin +Merlin GeneMark.hmm mRNA 87067 87291 . + . ID=Merlin_154_mRNA;Parent=Merlin_154;seqid=Merlin +Merlin GeneMark.hmm exon 87067 87291 . + . ID=Merlin_154_exon;Parent=Merlin_154_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87067 87291 . + 0 ID=Merlin_154_CDS;Parent=Merlin_154_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87288 87548 -320.850170 + . ID=Merlin_155;seqid=Merlin +Merlin GeneMark.hmm mRNA 87288 87548 . + . ID=Merlin_155_mRNA;Parent=Merlin_155;seqid=Merlin +Merlin GeneMark.hmm exon 87288 87548 . + . ID=Merlin_155_exon;Parent=Merlin_155_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87288 87548 . + 0 ID=Merlin_155_CDS;Parent=Merlin_155_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87545 87838 -368.941897 + . ID=Merlin_156;seqid=Merlin +Merlin GeneMark.hmm mRNA 87545 87838 . + . ID=Merlin_156_mRNA;Parent=Merlin_156;seqid=Merlin +Merlin GeneMark.hmm exon 87545 87838 . + . ID=Merlin_156_exon;Parent=Merlin_156_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87545 87838 . + 0 ID=Merlin_156_CDS;Parent=Merlin_156_exon;seqid=Merlin +Merlin GeneMark.hmm gene 87906 88445 -686.934268 + . ID=Merlin_157;seqid=Merlin +Merlin GeneMark.hmm mRNA 87906 88445 . + . ID=Merlin_157_mRNA;Parent=Merlin_157;seqid=Merlin +Merlin GeneMark.hmm exon 87906 88445 . + . ID=Merlin_157_exon;Parent=Merlin_157_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 87906 88445 . + 0 ID=Merlin_157_CDS;Parent=Merlin_157_exon;seqid=Merlin +Merlin GeneMark.hmm gene 88429 88656 -293.300141 + . ID=Merlin_158;seqid=Merlin +Merlin GeneMark.hmm mRNA 88429 88656 . + . ID=Merlin_158_mRNA;Parent=Merlin_158;seqid=Merlin +Merlin GeneMark.hmm exon 88429 88656 . + . ID=Merlin_158_exon;Parent=Merlin_158_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 88429 88656 . + 0 ID=Merlin_158_CDS;Parent=Merlin_158_exon;seqid=Merlin +Merlin GeneMark.hmm gene 88663 89031 -446.339761 + . ID=Merlin_159;seqid=Merlin +Merlin GeneMark.hmm mRNA 88663 89031 . + . ID=Merlin_159_mRNA;Parent=Merlin_159;seqid=Merlin +Merlin GeneMark.hmm exon 88663 89031 . + . ID=Merlin_159_exon;Parent=Merlin_159_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 88663 89031 . + 0 ID=Merlin_159_CDS;Parent=Merlin_159_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89012 89221 -255.579886 + . ID=Merlin_160;seqid=Merlin +Merlin GeneMark.hmm mRNA 89012 89221 . + . ID=Merlin_160_mRNA;Parent=Merlin_160;seqid=Merlin +Merlin GeneMark.hmm exon 89012 89221 . + . ID=Merlin_160_exon;Parent=Merlin_160_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89012 89221 . + 0 ID=Merlin_160_CDS;Parent=Merlin_160_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89206 89394 -231.007880 + . ID=Merlin_161;seqid=Merlin +Merlin GeneMark.hmm mRNA 89206 89394 . + . ID=Merlin_161_mRNA;Parent=Merlin_161;seqid=Merlin +Merlin GeneMark.hmm exon 89206 89394 . + . ID=Merlin_161_exon;Parent=Merlin_161_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89206 89394 . + 0 ID=Merlin_161_CDS;Parent=Merlin_161_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89426 89764 -419.076718 + . ID=Merlin_162;seqid=Merlin +Merlin GeneMark.hmm mRNA 89426 89764 . + . ID=Merlin_162_mRNA;Parent=Merlin_162;seqid=Merlin +Merlin GeneMark.hmm exon 89426 89764 . + . ID=Merlin_162_exon;Parent=Merlin_162_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89426 89764 . + 0 ID=Merlin_162_CDS;Parent=Merlin_162_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89826 89969 -185.055842 + . ID=Merlin_163;seqid=Merlin +Merlin GeneMark.hmm mRNA 89826 89969 . + . ID=Merlin_163_mRNA;Parent=Merlin_163;seqid=Merlin +Merlin GeneMark.hmm exon 89826 89969 . + . ID=Merlin_163_exon;Parent=Merlin_163_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89826 89969 . + 0 ID=Merlin_163_CDS;Parent=Merlin_163_exon;seqid=Merlin +Merlin GeneMark.hmm gene 89966 90988 -1312.043599 + . ID=Merlin_164;seqid=Merlin +Merlin GeneMark.hmm mRNA 89966 90988 . + . ID=Merlin_164_mRNA;Parent=Merlin_164;seqid=Merlin +Merlin GeneMark.hmm exon 89966 90988 . + . ID=Merlin_164_exon;Parent=Merlin_164_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 89966 90988 . + 0 ID=Merlin_164_CDS;Parent=Merlin_164_exon;seqid=Merlin +Merlin GeneMark.hmm gene 90985 91191 -254.724476 + . ID=Merlin_165;seqid=Merlin +Merlin GeneMark.hmm mRNA 90985 91191 . + . ID=Merlin_165_mRNA;Parent=Merlin_165;seqid=Merlin +Merlin GeneMark.hmm exon 90985 91191 . + . ID=Merlin_165_exon;Parent=Merlin_165_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 90985 91191 . + 0 ID=Merlin_165_CDS;Parent=Merlin_165_exon;seqid=Merlin +Merlin GeneMark.hmm gene 91188 92870 -2159.860384 + . ID=Merlin_166;seqid=Merlin +Merlin GeneMark.hmm mRNA 91188 92870 . + . ID=Merlin_166_mRNA;Parent=Merlin_166;seqid=Merlin +Merlin GeneMark.hmm exon 91188 92870 . + . ID=Merlin_166_exon;Parent=Merlin_166_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 91188 92870 . + 0 ID=Merlin_166_CDS;Parent=Merlin_166_exon;seqid=Merlin +Merlin GeneMark.hmm gene 92867 93058 -240.822321 + . ID=Merlin_167;seqid=Merlin +Merlin GeneMark.hmm mRNA 92867 93058 . + . ID=Merlin_167_mRNA;Parent=Merlin_167;seqid=Merlin +Merlin GeneMark.hmm exon 92867 93058 . + . ID=Merlin_167_exon;Parent=Merlin_167_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 92867 93058 . + 0 ID=Merlin_167_CDS;Parent=Merlin_167_exon;seqid=Merlin +Merlin GeneMark.hmm gene 93067 93450 -466.762497 + . ID=Merlin_168;seqid=Merlin +Merlin GeneMark.hmm mRNA 93067 93450 . + . ID=Merlin_168_mRNA;Parent=Merlin_168;seqid=Merlin +Merlin GeneMark.hmm exon 93067 93450 . + . ID=Merlin_168_exon;Parent=Merlin_168_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 93067 93450 . + 0 ID=Merlin_168_CDS;Parent=Merlin_168_exon;seqid=Merlin +Merlin GeneMark.hmm gene 93469 94155 -853.161656 + . ID=Merlin_169;seqid=Merlin +Merlin GeneMark.hmm mRNA 93469 94155 . + . ID=Merlin_169_mRNA;Parent=Merlin_169;seqid=Merlin +Merlin GeneMark.hmm exon 93469 94155 . + . ID=Merlin_169_exon;Parent=Merlin_169_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 93469 94155 . + 0 ID=Merlin_169_CDS;Parent=Merlin_169_exon;seqid=Merlin +Merlin GeneMark.hmm gene 94209 95174 -1219.402057 + . ID=Merlin_170;seqid=Merlin +Merlin GeneMark.hmm mRNA 94209 95174 . + . ID=Merlin_170_mRNA;Parent=Merlin_170;seqid=Merlin +Merlin GeneMark.hmm exon 94209 95174 . + . ID=Merlin_170_exon;Parent=Merlin_170_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 94209 95174 . + 0 ID=Merlin_170_CDS;Parent=Merlin_170_exon;seqid=Merlin +Merlin GeneMark.hmm gene 95174 95737 -724.605488 + . ID=Merlin_171;seqid=Merlin +Merlin GeneMark.hmm mRNA 95174 95737 . + . ID=Merlin_171_mRNA;Parent=Merlin_171;seqid=Merlin +Merlin GeneMark.hmm exon 95174 95737 . + . ID=Merlin_171_exon;Parent=Merlin_171_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 95174 95737 . + 0 ID=Merlin_171_CDS;Parent=Merlin_171_exon;seqid=Merlin +Merlin GeneMark.hmm gene 95731 96108 -464.835446 + . ID=Merlin_172;seqid=Merlin +Merlin GeneMark.hmm mRNA 95731 96108 . + . ID=Merlin_172_mRNA;Parent=Merlin_172;seqid=Merlin +Merlin GeneMark.hmm exon 95731 96108 . + . ID=Merlin_172_exon;Parent=Merlin_172_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 95731 96108 . + 0 ID=Merlin_172_CDS;Parent=Merlin_172_exon;seqid=Merlin +Merlin GeneMark.hmm gene 96110 96331 -276.260456 + . ID=Merlin_173;seqid=Merlin +Merlin GeneMark.hmm mRNA 96110 96331 . + . ID=Merlin_173_mRNA;Parent=Merlin_173;seqid=Merlin +Merlin GeneMark.hmm exon 96110 96331 . + . ID=Merlin_173_exon;Parent=Merlin_173_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 96110 96331 . + 0 ID=Merlin_173_CDS;Parent=Merlin_173_exon;seqid=Merlin +Merlin GeneMark.hmm gene 96426 99116 -3385.938661 + . ID=Merlin_174;seqid=Merlin +Merlin GeneMark.hmm mRNA 96426 99116 . + . ID=Merlin_174_mRNA;Parent=Merlin_174;seqid=Merlin +Merlin GeneMark.hmm exon 96426 99116 . + . ID=Merlin_174_exon;Parent=Merlin_174_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 96426 99116 . + 0 ID=Merlin_174_CDS;Parent=Merlin_174_exon;seqid=Merlin +Merlin GeneMark.hmm gene 99179 99418 -294.745409 + . ID=Merlin_175;seqid=Merlin +Merlin GeneMark.hmm mRNA 99179 99418 . + . ID=Merlin_175_mRNA;Parent=Merlin_175;seqid=Merlin +Merlin GeneMark.hmm exon 99179 99418 . + . ID=Merlin_175_exon;Parent=Merlin_175_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 99179 99418 . + 0 ID=Merlin_175_CDS;Parent=Merlin_175_exon;seqid=Merlin +Merlin GeneMark.hmm gene 99455 99895 -551.164186 + . ID=Merlin_176;seqid=Merlin +Merlin GeneMark.hmm mRNA 99455 99895 . + . ID=Merlin_176_mRNA;Parent=Merlin_176;seqid=Merlin +Merlin GeneMark.hmm exon 99455 99895 . + . ID=Merlin_176_exon;Parent=Merlin_176_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 99455 99895 . + 0 ID=Merlin_176_CDS;Parent=Merlin_176_exon;seqid=Merlin +Merlin GeneMark.hmm gene 99928 100140 -262.065624 + . ID=Merlin_177;seqid=Merlin +Merlin GeneMark.hmm mRNA 99928 100140 . + . ID=Merlin_177_mRNA;Parent=Merlin_177;seqid=Merlin +Merlin GeneMark.hmm exon 99928 100140 . + . ID=Merlin_177_exon;Parent=Merlin_177_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 99928 100140 . + 0 ID=Merlin_177_CDS;Parent=Merlin_177_exon;seqid=Merlin +Merlin GeneMark.hmm gene 100137 100877 -927.530517 + . ID=Merlin_178;seqid=Merlin +Merlin GeneMark.hmm mRNA 100137 100877 . + . ID=Merlin_178_mRNA;Parent=Merlin_178;seqid=Merlin +Merlin GeneMark.hmm exon 100137 100877 . + . ID=Merlin_178_exon;Parent=Merlin_178_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 100137 100877 . + 0 ID=Merlin_178_CDS;Parent=Merlin_178_exon;seqid=Merlin +Merlin GeneMark.hmm gene 100868 101704 -1058.313313 + . ID=Merlin_179;seqid=Merlin +Merlin GeneMark.hmm mRNA 100868 101704 . + . ID=Merlin_179_mRNA;Parent=Merlin_179;seqid=Merlin +Merlin GeneMark.hmm exon 100868 101704 . + . ID=Merlin_179_exon;Parent=Merlin_179_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 100868 101704 . + 0 ID=Merlin_179_CDS;Parent=Merlin_179_exon;seqid=Merlin +Merlin GeneMark.hmm gene 101701 102777 -1345.602625 + . ID=Merlin_180;seqid=Merlin +Merlin GeneMark.hmm mRNA 101701 102777 . + . ID=Merlin_180_mRNA;Parent=Merlin_180;seqid=Merlin +Merlin GeneMark.hmm exon 101701 102777 . + . ID=Merlin_180_exon;Parent=Merlin_180_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 101701 102777 . + 0 ID=Merlin_180_CDS;Parent=Merlin_180_exon;seqid=Merlin +Merlin GeneMark.hmm gene 102885 104072 -1483.608352 + . ID=Merlin_181;seqid=Merlin +Merlin GeneMark.hmm mRNA 102885 104072 . + . ID=Merlin_181_mRNA;Parent=Merlin_181;seqid=Merlin +Merlin GeneMark.hmm exon 102885 104072 . + . ID=Merlin_181_exon;Parent=Merlin_181_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 102885 104072 . + 0 ID=Merlin_181_CDS;Parent=Merlin_181_exon;seqid=Merlin +Merlin GeneMark.hmm gene 104072 104422 -451.869493 + . ID=Merlin_182;seqid=Merlin +Merlin GeneMark.hmm mRNA 104072 104422 . + . ID=Merlin_182_mRNA;Parent=Merlin_182;seqid=Merlin +Merlin GeneMark.hmm exon 104072 104422 . + . ID=Merlin_182_exon;Parent=Merlin_182_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 104072 104422 . + 0 ID=Merlin_182_CDS;Parent=Merlin_182_exon;seqid=Merlin +Merlin GeneMark.hmm gene 104500 105867 -1730.587045 + . ID=Merlin_183;seqid=Merlin +Merlin GeneMark.hmm mRNA 104500 105867 . + . ID=Merlin_183_mRNA;Parent=Merlin_183;seqid=Merlin +Merlin GeneMark.hmm exon 104500 105867 . + . ID=Merlin_183_exon;Parent=Merlin_183_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 104500 105867 . + 0 ID=Merlin_183_CDS;Parent=Merlin_183_exon;seqid=Merlin +Merlin GeneMark.hmm gene 105928 106209 -352.988779 + . ID=Merlin_184;seqid=Merlin +Merlin GeneMark.hmm mRNA 105928 106209 . + . ID=Merlin_184_mRNA;Parent=Merlin_184;seqid=Merlin +Merlin GeneMark.hmm exon 105928 106209 . + . ID=Merlin_184_exon;Parent=Merlin_184_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 105928 106209 . + 0 ID=Merlin_184_CDS;Parent=Merlin_184_exon;seqid=Merlin +Merlin GeneMark.hmm gene 106209 106487 -351.122469 + . ID=Merlin_185;seqid=Merlin +Merlin GeneMark.hmm mRNA 106209 106487 . + . ID=Merlin_185_mRNA;Parent=Merlin_185;seqid=Merlin +Merlin GeneMark.hmm exon 106209 106487 . + . ID=Merlin_185_exon;Parent=Merlin_185_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 106209 106487 . + 0 ID=Merlin_185_CDS;Parent=Merlin_185_exon;seqid=Merlin +Merlin GeneMark.hmm gene 106487 106684 -246.970187 + . ID=Merlin_186;seqid=Merlin +Merlin GeneMark.hmm mRNA 106487 106684 . + . ID=Merlin_186_mRNA;Parent=Merlin_186;seqid=Merlin +Merlin GeneMark.hmm exon 106487 106684 . + . ID=Merlin_186_exon;Parent=Merlin_186_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 106487 106684 . + 0 ID=Merlin_186_CDS;Parent=Merlin_186_exon;seqid=Merlin +Merlin GeneMark.hmm gene 106699 107163 -615.053890 + . ID=Merlin_187;seqid=Merlin +Merlin GeneMark.hmm mRNA 106699 107163 . + . ID=Merlin_187_mRNA;Parent=Merlin_187;seqid=Merlin +Merlin GeneMark.hmm exon 106699 107163 . + . ID=Merlin_187_exon;Parent=Merlin_187_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 106699 107163 . + 0 ID=Merlin_187_CDS;Parent=Merlin_187_exon;seqid=Merlin +Merlin GeneMark.hmm gene 107200 108225 -1324.566436 + . ID=Merlin_188;seqid=Merlin +Merlin GeneMark.hmm mRNA 107200 108225 . + . ID=Merlin_188_mRNA;Parent=Merlin_188;seqid=Merlin +Merlin GeneMark.hmm exon 107200 108225 . + . ID=Merlin_188_exon;Parent=Merlin_188_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 107200 108225 . + 0 ID=Merlin_188_CDS;Parent=Merlin_188_exon;seqid=Merlin +Merlin GeneMark.hmm gene 108222 108419 -244.299886 - . ID=Merlin_189;seqid=Merlin +Merlin GeneMark.hmm mRNA 108222 108419 . - . ID=Merlin_189_mRNA;Parent=Merlin_189;seqid=Merlin +Merlin GeneMark.hmm exon 108222 108419 . - . ID=Merlin_189_exon;Parent=Merlin_189_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 108222 108419 . - 0 ID=Merlin_189_CDS;Parent=Merlin_189_exon;seqid=Merlin +Merlin GeneMark.hmm gene 108443 108727 -361.722638 + . ID=Merlin_190;seqid=Merlin +Merlin GeneMark.hmm mRNA 108443 108727 . + . ID=Merlin_190_mRNA;Parent=Merlin_190;seqid=Merlin +Merlin GeneMark.hmm exon 108443 108727 . + . ID=Merlin_190_exon;Parent=Merlin_190_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 108443 108727 . + 0 ID=Merlin_190_CDS;Parent=Merlin_190_exon;seqid=Merlin +Merlin GeneMark.hmm gene 108746 109267 -660.122856 + . ID=Merlin_191;seqid=Merlin +Merlin GeneMark.hmm mRNA 108746 109267 . + . ID=Merlin_191_mRNA;Parent=Merlin_191;seqid=Merlin +Merlin GeneMark.hmm exon 108746 109267 . + . ID=Merlin_191_exon;Parent=Merlin_191_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 108746 109267 . + 0 ID=Merlin_191_CDS;Parent=Merlin_191_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109283 109450 -207.369336 + . ID=Merlin_192;seqid=Merlin +Merlin GeneMark.hmm mRNA 109283 109450 . + . ID=Merlin_192_mRNA;Parent=Merlin_192;seqid=Merlin +Merlin GeneMark.hmm exon 109283 109450 . + . ID=Merlin_192_exon;Parent=Merlin_192_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109283 109450 . + 0 ID=Merlin_192_CDS;Parent=Merlin_192_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109463 109684 -282.485263 + . ID=Merlin_193;seqid=Merlin +Merlin GeneMark.hmm mRNA 109463 109684 . + . ID=Merlin_193_mRNA;Parent=Merlin_193;seqid=Merlin +Merlin GeneMark.hmm exon 109463 109684 . + . ID=Merlin_193_exon;Parent=Merlin_193_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109463 109684 . + 0 ID=Merlin_193_CDS;Parent=Merlin_193_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109681 109833 -188.437796 + . ID=Merlin_194;seqid=Merlin +Merlin GeneMark.hmm mRNA 109681 109833 . + . ID=Merlin_194_mRNA;Parent=Merlin_194;seqid=Merlin +Merlin GeneMark.hmm exon 109681 109833 . + . ID=Merlin_194_exon;Parent=Merlin_194_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109681 109833 . + 0 ID=Merlin_194_CDS;Parent=Merlin_194_exon;seqid=Merlin +Merlin GeneMark.hmm gene 109868 110107 -300.363740 + . ID=Merlin_195;seqid=Merlin +Merlin GeneMark.hmm mRNA 109868 110107 . + . ID=Merlin_195_mRNA;Parent=Merlin_195;seqid=Merlin +Merlin GeneMark.hmm exon 109868 110107 . + . ID=Merlin_195_exon;Parent=Merlin_195_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 109868 110107 . + 0 ID=Merlin_195_CDS;Parent=Merlin_195_exon;seqid=Merlin +Merlin GeneMark.hmm gene 110187 110387 -242.566720 + . ID=Merlin_196;seqid=Merlin +Merlin GeneMark.hmm mRNA 110187 110387 . + . ID=Merlin_196_mRNA;Parent=Merlin_196;seqid=Merlin +Merlin GeneMark.hmm exon 110187 110387 . + . ID=Merlin_196_exon;Parent=Merlin_196_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 110187 110387 . + 0 ID=Merlin_196_CDS;Parent=Merlin_196_exon;seqid=Merlin +Merlin GeneMark.hmm gene 110384 110623 -295.174485 + . ID=Merlin_197;seqid=Merlin +Merlin GeneMark.hmm mRNA 110384 110623 . + . ID=Merlin_197_mRNA;Parent=Merlin_197;seqid=Merlin +Merlin GeneMark.hmm exon 110384 110623 . + . ID=Merlin_197_exon;Parent=Merlin_197_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 110384 110623 . + 0 ID=Merlin_197_CDS;Parent=Merlin_197_exon;seqid=Merlin +Merlin GeneMark.hmm gene 110620 111051 -544.978023 + . ID=Merlin_198;seqid=Merlin +Merlin GeneMark.hmm mRNA 110620 111051 . + . ID=Merlin_198_mRNA;Parent=Merlin_198;seqid=Merlin +Merlin GeneMark.hmm exon 110620 111051 . + . ID=Merlin_198_exon;Parent=Merlin_198_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 110620 111051 . + 0 ID=Merlin_198_CDS;Parent=Merlin_198_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111101 111238 -161.794612 + . ID=Merlin_199;seqid=Merlin +Merlin GeneMark.hmm mRNA 111101 111238 . + . ID=Merlin_199_mRNA;Parent=Merlin_199;seqid=Merlin +Merlin GeneMark.hmm exon 111101 111238 . + . ID=Merlin_199_exon;Parent=Merlin_199_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111101 111238 . + 0 ID=Merlin_199_CDS;Parent=Merlin_199_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111213 111737 -670.599096 + . ID=Merlin_200;seqid=Merlin +Merlin GeneMark.hmm mRNA 111213 111737 . + . ID=Merlin_200_mRNA;Parent=Merlin_200;seqid=Merlin +Merlin GeneMark.hmm exon 111213 111737 . + . ID=Merlin_200_exon;Parent=Merlin_200_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111213 111737 . + 0 ID=Merlin_200_CDS;Parent=Merlin_200_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111737 111913 -223.231704 + . ID=Merlin_201;seqid=Merlin +Merlin GeneMark.hmm mRNA 111737 111913 . + . ID=Merlin_201_mRNA;Parent=Merlin_201;seqid=Merlin +Merlin GeneMark.hmm exon 111737 111913 . + . ID=Merlin_201_exon;Parent=Merlin_201_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111737 111913 . + 0 ID=Merlin_201_CDS;Parent=Merlin_201_exon;seqid=Merlin +Merlin GeneMark.hmm gene 111973 112590 -802.696887 + . ID=Merlin_202;seqid=Merlin +Merlin GeneMark.hmm mRNA 111973 112590 . + . ID=Merlin_202_mRNA;Parent=Merlin_202;seqid=Merlin +Merlin GeneMark.hmm exon 111973 112590 . + . ID=Merlin_202_exon;Parent=Merlin_202_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 111973 112590 . + 0 ID=Merlin_202_CDS;Parent=Merlin_202_exon;seqid=Merlin +Merlin GeneMark.hmm gene 112676 113461 -994.252012 + . ID=Merlin_203;seqid=Merlin +Merlin GeneMark.hmm mRNA 112676 113461 . + . ID=Merlin_203_mRNA;Parent=Merlin_203;seqid=Merlin +Merlin GeneMark.hmm exon 112676 113461 . + . ID=Merlin_203_exon;Parent=Merlin_203_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 112676 113461 . + 0 ID=Merlin_203_CDS;Parent=Merlin_203_exon;seqid=Merlin +Merlin GeneMark.hmm gene 113461 113778 -389.300206 + . ID=Merlin_204;seqid=Merlin +Merlin GeneMark.hmm mRNA 113461 113778 . + . ID=Merlin_204_mRNA;Parent=Merlin_204;seqid=Merlin +Merlin GeneMark.hmm exon 113461 113778 . + . ID=Merlin_204_exon;Parent=Merlin_204_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 113461 113778 . + 0 ID=Merlin_204_CDS;Parent=Merlin_204_exon;seqid=Merlin +Merlin GeneMark.hmm gene 113787 115118 -1697.881894 + . ID=Merlin_205;seqid=Merlin +Merlin GeneMark.hmm mRNA 113787 115118 . + . ID=Merlin_205_mRNA;Parent=Merlin_205;seqid=Merlin +Merlin GeneMark.hmm exon 113787 115118 . + . ID=Merlin_205_exon;Parent=Merlin_205_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 113787 115118 . + 0 ID=Merlin_205_CDS;Parent=Merlin_205_exon;seqid=Merlin +Merlin GeneMark.hmm gene 115125 115355 -279.940476 + . ID=Merlin_206;seqid=Merlin +Merlin GeneMark.hmm mRNA 115125 115355 . + . ID=Merlin_206_mRNA;Parent=Merlin_206;seqid=Merlin +Merlin GeneMark.hmm exon 115125 115355 . + . ID=Merlin_206_exon;Parent=Merlin_206_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 115125 115355 . + 0 ID=Merlin_206_CDS;Parent=Merlin_206_exon;seqid=Merlin +Merlin GeneMark.hmm gene 115346 116038 -870.417189 + . ID=Merlin_207;seqid=Merlin +Merlin GeneMark.hmm mRNA 115346 116038 . + . ID=Merlin_207_mRNA;Parent=Merlin_207;seqid=Merlin +Merlin GeneMark.hmm exon 115346 116038 . + . ID=Merlin_207_exon;Parent=Merlin_207_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 115346 116038 . + 0 ID=Merlin_207_CDS;Parent=Merlin_207_exon;seqid=Merlin +Merlin GeneMark.hmm gene 116040 116453 -527.653367 + . ID=Merlin_208;seqid=Merlin +Merlin GeneMark.hmm mRNA 116040 116453 . + . ID=Merlin_208_mRNA;Parent=Merlin_208;seqid=Merlin +Merlin GeneMark.hmm exon 116040 116453 . + . ID=Merlin_208_exon;Parent=Merlin_208_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 116040 116453 . + 0 ID=Merlin_208_CDS;Parent=Merlin_208_exon;seqid=Merlin +Merlin GeneMark.hmm gene 116520 116714 -243.312871 + . ID=Merlin_209;seqid=Merlin +Merlin GeneMark.hmm mRNA 116520 116714 . + . ID=Merlin_209_mRNA;Parent=Merlin_209;seqid=Merlin +Merlin GeneMark.hmm exon 116520 116714 . + . ID=Merlin_209_exon;Parent=Merlin_209_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 116520 116714 . + 0 ID=Merlin_209_CDS;Parent=Merlin_209_exon;seqid=Merlin +Merlin GeneMark.hmm gene 116714 117190 -587.212745 + . ID=Merlin_210;seqid=Merlin +Merlin GeneMark.hmm mRNA 116714 117190 . + . ID=Merlin_210_mRNA;Parent=Merlin_210;seqid=Merlin +Merlin GeneMark.hmm exon 116714 117190 . + . ID=Merlin_210_exon;Parent=Merlin_210_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 116714 117190 . + 0 ID=Merlin_210_CDS;Parent=Merlin_210_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117177 117371 -246.741774 + . ID=Merlin_211;seqid=Merlin +Merlin GeneMark.hmm mRNA 117177 117371 . + . ID=Merlin_211_mRNA;Parent=Merlin_211;seqid=Merlin +Merlin GeneMark.hmm exon 117177 117371 . + . ID=Merlin_211_exon;Parent=Merlin_211_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117177 117371 . + 0 ID=Merlin_211_CDS;Parent=Merlin_211_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117368 117844 -587.223837 + . ID=Merlin_212;seqid=Merlin +Merlin GeneMark.hmm mRNA 117368 117844 . + . ID=Merlin_212_mRNA;Parent=Merlin_212;seqid=Merlin +Merlin GeneMark.hmm exon 117368 117844 . + . ID=Merlin_212_exon;Parent=Merlin_212_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117368 117844 . + 0 ID=Merlin_212_CDS;Parent=Merlin_212_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117841 117939 -117.153787 + . ID=Merlin_213;seqid=Merlin +Merlin GeneMark.hmm mRNA 117841 117939 . + . ID=Merlin_213_mRNA;Parent=Merlin_213;seqid=Merlin +Merlin GeneMark.hmm exon 117841 117939 . + . ID=Merlin_213_exon;Parent=Merlin_213_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117841 117939 . + 0 ID=Merlin_213_CDS;Parent=Merlin_213_exon;seqid=Merlin +Merlin GeneMark.hmm gene 117936 118187 -314.341261 + . ID=Merlin_214;seqid=Merlin +Merlin GeneMark.hmm mRNA 117936 118187 . + . ID=Merlin_214_mRNA;Parent=Merlin_214;seqid=Merlin +Merlin GeneMark.hmm exon 117936 118187 . + . ID=Merlin_214_exon;Parent=Merlin_214_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 117936 118187 . + 0 ID=Merlin_214_CDS;Parent=Merlin_214_exon;seqid=Merlin +Merlin GeneMark.hmm gene 118184 118411 -293.015141 + . ID=Merlin_215;seqid=Merlin +Merlin GeneMark.hmm mRNA 118184 118411 . + . ID=Merlin_215_mRNA;Parent=Merlin_215;seqid=Merlin +Merlin GeneMark.hmm exon 118184 118411 . + . ID=Merlin_215_exon;Parent=Merlin_215_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 118184 118411 . + 0 ID=Merlin_215_CDS;Parent=Merlin_215_exon;seqid=Merlin +Merlin GeneMark.hmm gene 118435 118818 -477.204459 + . ID=Merlin_216;seqid=Merlin +Merlin GeneMark.hmm mRNA 118435 118818 . + . ID=Merlin_216_mRNA;Parent=Merlin_216;seqid=Merlin +Merlin GeneMark.hmm exon 118435 118818 . + . ID=Merlin_216_exon;Parent=Merlin_216_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 118435 118818 . + 0 ID=Merlin_216_CDS;Parent=Merlin_216_exon;seqid=Merlin +Merlin GeneMark.hmm gene 118849 120690 -2259.486004 + . ID=Merlin_217;seqid=Merlin +Merlin GeneMark.hmm mRNA 118849 120690 . + . ID=Merlin_217_mRNA;Parent=Merlin_217;seqid=Merlin +Merlin GeneMark.hmm exon 118849 120690 . + . ID=Merlin_217_exon;Parent=Merlin_217_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 118849 120690 . + 0 ID=Merlin_217_CDS;Parent=Merlin_217_exon;seqid=Merlin +Merlin GeneMark.hmm gene 120730 120885 -200.778885 + . ID=Merlin_218;seqid=Merlin +Merlin GeneMark.hmm mRNA 120730 120885 . + . ID=Merlin_218_mRNA;Parent=Merlin_218;seqid=Merlin +Merlin GeneMark.hmm exon 120730 120885 . + . ID=Merlin_218_exon;Parent=Merlin_218_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 120730 120885 . + 0 ID=Merlin_218_CDS;Parent=Merlin_218_exon;seqid=Merlin +Merlin GeneMark.hmm gene 120929 121213 -363.032822 + . ID=Merlin_219;seqid=Merlin +Merlin GeneMark.hmm mRNA 120929 121213 . + . ID=Merlin_219_mRNA;Parent=Merlin_219;seqid=Merlin +Merlin GeneMark.hmm exon 120929 121213 . + . ID=Merlin_219_exon;Parent=Merlin_219_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 120929 121213 . + 0 ID=Merlin_219_CDS;Parent=Merlin_219_exon;seqid=Merlin +Merlin GeneMark.hmm gene 121200 121400 -244.392369 + . ID=Merlin_220;seqid=Merlin +Merlin GeneMark.hmm mRNA 121200 121400 . + . ID=Merlin_220_mRNA;Parent=Merlin_220;seqid=Merlin +Merlin GeneMark.hmm exon 121200 121400 . + . ID=Merlin_220_exon;Parent=Merlin_220_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 121200 121400 . + 0 ID=Merlin_220_CDS;Parent=Merlin_220_exon;seqid=Merlin +Merlin GeneMark.hmm gene 121411 123588 -2750.112191 + . ID=Merlin_221;seqid=Merlin +Merlin GeneMark.hmm mRNA 121411 123588 . + . ID=Merlin_221_mRNA;Parent=Merlin_221;seqid=Merlin +Merlin GeneMark.hmm exon 121411 123588 . + . ID=Merlin_221_exon;Parent=Merlin_221_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 121411 123588 . + 0 ID=Merlin_221_CDS;Parent=Merlin_221_exon;seqid=Merlin +Merlin GeneMark.hmm gene 123598 124494 -1129.990261 + . ID=Merlin_222;seqid=Merlin +Merlin GeneMark.hmm mRNA 123598 124494 . + . ID=Merlin_222_mRNA;Parent=Merlin_222;seqid=Merlin +Merlin GeneMark.hmm exon 123598 124494 . + . ID=Merlin_222_exon;Parent=Merlin_222_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 123598 124494 . + 0 ID=Merlin_222_CDS;Parent=Merlin_222_exon;seqid=Merlin +Merlin GeneMark.hmm gene 124494 124691 -244.507612 + . ID=Merlin_223;seqid=Merlin +Merlin GeneMark.hmm mRNA 124494 124691 . + . ID=Merlin_223_mRNA;Parent=Merlin_223;seqid=Merlin +Merlin GeneMark.hmm exon 124494 124691 . + . ID=Merlin_223_exon;Parent=Merlin_223_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 124494 124691 . + 0 ID=Merlin_223_CDS;Parent=Merlin_223_exon;seqid=Merlin +Merlin GeneMark.hmm gene 124727 125047 -399.871946 + . ID=Merlin_224;seqid=Merlin +Merlin GeneMark.hmm mRNA 124727 125047 . + . ID=Merlin_224_mRNA;Parent=Merlin_224;seqid=Merlin +Merlin GeneMark.hmm exon 124727 125047 . + . ID=Merlin_224_exon;Parent=Merlin_224_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 124727 125047 . + 0 ID=Merlin_224_CDS;Parent=Merlin_224_exon;seqid=Merlin +Merlin GeneMark.hmm gene 125097 125537 -571.759726 + . ID=Merlin_225;seqid=Merlin +Merlin GeneMark.hmm mRNA 125097 125537 . + . ID=Merlin_225_mRNA;Parent=Merlin_225;seqid=Merlin +Merlin GeneMark.hmm exon 125097 125537 . + . ID=Merlin_225_exon;Parent=Merlin_225_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 125097 125537 . + 0 ID=Merlin_225_CDS;Parent=Merlin_225_exon;seqid=Merlin +Merlin GeneMark.hmm gene 125606 125851 -292.219635 + . ID=Merlin_226;seqid=Merlin +Merlin GeneMark.hmm mRNA 125606 125851 . + . ID=Merlin_226_mRNA;Parent=Merlin_226;seqid=Merlin +Merlin GeneMark.hmm exon 125606 125851 . + . ID=Merlin_226_exon;Parent=Merlin_226_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 125606 125851 . + 0 ID=Merlin_226_CDS;Parent=Merlin_226_exon;seqid=Merlin +Merlin GeneMark.hmm gene 125848 126039 -240.766275 + . ID=Merlin_227;seqid=Merlin +Merlin GeneMark.hmm mRNA 125848 126039 . + . ID=Merlin_227_mRNA;Parent=Merlin_227;seqid=Merlin +Merlin GeneMark.hmm exon 125848 126039 . + . ID=Merlin_227_exon;Parent=Merlin_227_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 125848 126039 . + 0 ID=Merlin_227_CDS;Parent=Merlin_227_exon;seqid=Merlin +Merlin GeneMark.hmm gene 126096 126536 -555.654560 + . ID=Merlin_228;seqid=Merlin +Merlin GeneMark.hmm mRNA 126096 126536 . + . ID=Merlin_228_mRNA;Parent=Merlin_228;seqid=Merlin +Merlin GeneMark.hmm exon 126096 126536 . + . ID=Merlin_228_exon;Parent=Merlin_228_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 126096 126536 . + 0 ID=Merlin_228_CDS;Parent=Merlin_228_exon;seqid=Merlin +Merlin GeneMark.hmm gene 126843 126980 -167.572589 + . ID=Merlin_229;seqid=Merlin +Merlin GeneMark.hmm mRNA 126843 126980 . + . ID=Merlin_229_mRNA;Parent=Merlin_229;seqid=Merlin +Merlin GeneMark.hmm exon 126843 126980 . + . ID=Merlin_229_exon;Parent=Merlin_229_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 126843 126980 . + 0 ID=Merlin_229_CDS;Parent=Merlin_229_exon;seqid=Merlin +Merlin GeneMark.hmm gene 126985 128322 -1655.641432 + . ID=Merlin_230;seqid=Merlin +Merlin GeneMark.hmm mRNA 126985 128322 . + . ID=Merlin_230_mRNA;Parent=Merlin_230;seqid=Merlin +Merlin GeneMark.hmm exon 126985 128322 . + . ID=Merlin_230_exon;Parent=Merlin_230_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 126985 128322 . + 0 ID=Merlin_230_CDS;Parent=Merlin_230_exon;seqid=Merlin +Merlin GeneMark.hmm gene 128313 128453 -176.429391 + . ID=Merlin_231;seqid=Merlin +Merlin GeneMark.hmm mRNA 128313 128453 . + . ID=Merlin_231_mRNA;Parent=Merlin_231;seqid=Merlin +Merlin GeneMark.hmm exon 128313 128453 . + . ID=Merlin_231_exon;Parent=Merlin_231_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 128313 128453 . + 0 ID=Merlin_231_CDS;Parent=Merlin_231_exon;seqid=Merlin +Merlin GeneMark.hmm gene 128634 128867 -280.339767 + . ID=Merlin_232;seqid=Merlin +Merlin GeneMark.hmm mRNA 128634 128867 . + . ID=Merlin_232_mRNA;Parent=Merlin_232;seqid=Merlin +Merlin GeneMark.hmm exon 128634 128867 . + . ID=Merlin_232_exon;Parent=Merlin_232_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 128634 128867 . + 0 ID=Merlin_232_CDS;Parent=Merlin_232_exon;seqid=Merlin +Merlin GeneMark.hmm gene 128931 129194 -323.191370 + . ID=Merlin_233;seqid=Merlin +Merlin GeneMark.hmm mRNA 128931 129194 . + . ID=Merlin_233_mRNA;Parent=Merlin_233;seqid=Merlin +Merlin GeneMark.hmm exon 128931 129194 . + . ID=Merlin_233_exon;Parent=Merlin_233_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 128931 129194 . + 0 ID=Merlin_233_CDS;Parent=Merlin_233_exon;seqid=Merlin +Merlin GeneMark.hmm gene 129202 129471 -345.520317 + . ID=Merlin_234;seqid=Merlin +Merlin GeneMark.hmm mRNA 129202 129471 . + . ID=Merlin_234_mRNA;Parent=Merlin_234;seqid=Merlin +Merlin GeneMark.hmm exon 129202 129471 . + . ID=Merlin_234_exon;Parent=Merlin_234_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 129202 129471 . + 0 ID=Merlin_234_CDS;Parent=Merlin_234_exon;seqid=Merlin +Merlin GeneMark.hmm gene 129581 130225 -789.527965 + . ID=Merlin_235;seqid=Merlin +Merlin GeneMark.hmm mRNA 129581 130225 . + . ID=Merlin_235_mRNA;Parent=Merlin_235;seqid=Merlin +Merlin GeneMark.hmm exon 129581 130225 . + . ID=Merlin_235_exon;Parent=Merlin_235_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 129581 130225 . + 0 ID=Merlin_235_CDS;Parent=Merlin_235_exon;seqid=Merlin +Merlin GeneMark.hmm gene 130236 130643 -513.741632 + . ID=Merlin_236;seqid=Merlin +Merlin GeneMark.hmm mRNA 130236 130643 . + . ID=Merlin_236_mRNA;Parent=Merlin_236;seqid=Merlin +Merlin GeneMark.hmm exon 130236 130643 . + . ID=Merlin_236_exon;Parent=Merlin_236_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 130236 130643 . + 0 ID=Merlin_236_CDS;Parent=Merlin_236_exon;seqid=Merlin +Merlin GeneMark.hmm gene 130640 131017 -476.781736 + . ID=Merlin_237;seqid=Merlin +Merlin GeneMark.hmm mRNA 130640 131017 . + . ID=Merlin_237_mRNA;Parent=Merlin_237;seqid=Merlin +Merlin GeneMark.hmm exon 130640 131017 . + . ID=Merlin_237_exon;Parent=Merlin_237_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 130640 131017 . + 0 ID=Merlin_237_CDS;Parent=Merlin_237_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131017 131289 -326.061964 + . ID=Merlin_238;seqid=Merlin +Merlin GeneMark.hmm mRNA 131017 131289 . + . ID=Merlin_238_mRNA;Parent=Merlin_238;seqid=Merlin +Merlin GeneMark.hmm exon 131017 131289 . + . ID=Merlin_238_exon;Parent=Merlin_238_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131017 131289 . + 0 ID=Merlin_238_CDS;Parent=Merlin_238_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131289 131597 -389.454269 + . ID=Merlin_239;seqid=Merlin +Merlin GeneMark.hmm mRNA 131289 131597 . + . ID=Merlin_239_mRNA;Parent=Merlin_239;seqid=Merlin +Merlin GeneMark.hmm exon 131289 131597 . + . ID=Merlin_239_exon;Parent=Merlin_239_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131289 131597 . + 0 ID=Merlin_239_CDS;Parent=Merlin_239_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131569 131781 -264.904995 + . ID=Merlin_240;seqid=Merlin +Merlin GeneMark.hmm mRNA 131569 131781 . + . ID=Merlin_240_mRNA;Parent=Merlin_240;seqid=Merlin +Merlin GeneMark.hmm exon 131569 131781 . + . ID=Merlin_240_exon;Parent=Merlin_240_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131569 131781 . + 0 ID=Merlin_240_CDS;Parent=Merlin_240_exon;seqid=Merlin +Merlin GeneMark.hmm gene 131778 132191 -541.018164 + . ID=Merlin_241;seqid=Merlin +Merlin GeneMark.hmm mRNA 131778 132191 . + . ID=Merlin_241_mRNA;Parent=Merlin_241;seqid=Merlin +Merlin GeneMark.hmm exon 131778 132191 . + . ID=Merlin_241_exon;Parent=Merlin_241_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 131778 132191 . + 0 ID=Merlin_241_CDS;Parent=Merlin_241_exon;seqid=Merlin +Merlin GeneMark.hmm gene 132199 132585 -491.258919 + . ID=Merlin_242;seqid=Merlin +Merlin GeneMark.hmm mRNA 132199 132585 . + . ID=Merlin_242_mRNA;Parent=Merlin_242;seqid=Merlin +Merlin GeneMark.hmm exon 132199 132585 . + . ID=Merlin_242_exon;Parent=Merlin_242_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 132199 132585 . + 0 ID=Merlin_242_CDS;Parent=Merlin_242_exon;seqid=Merlin +Merlin GeneMark.hmm gene 132575 132847 -349.509326 + . ID=Merlin_243;seqid=Merlin +Merlin GeneMark.hmm mRNA 132575 132847 . + . ID=Merlin_243_mRNA;Parent=Merlin_243;seqid=Merlin +Merlin GeneMark.hmm exon 132575 132847 . + . ID=Merlin_243_exon;Parent=Merlin_243_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 132575 132847 . + 0 ID=Merlin_243_CDS;Parent=Merlin_243_exon;seqid=Merlin +Merlin GeneMark.hmm gene 132910 133182 -334.452325 + . ID=Merlin_244;seqid=Merlin +Merlin GeneMark.hmm mRNA 132910 133182 . + . ID=Merlin_244_mRNA;Parent=Merlin_244;seqid=Merlin +Merlin GeneMark.hmm exon 132910 133182 . + . ID=Merlin_244_exon;Parent=Merlin_244_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 132910 133182 . + 0 ID=Merlin_244_CDS;Parent=Merlin_244_exon;seqid=Merlin +Merlin GeneMark.hmm gene 133179 133835 -859.997228 - . ID=Merlin_245;seqid=Merlin +Merlin GeneMark.hmm mRNA 133179 133835 . - . ID=Merlin_245_mRNA;Parent=Merlin_245;seqid=Merlin +Merlin GeneMark.hmm exon 133179 133835 . - . ID=Merlin_245_exon;Parent=Merlin_245_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 133179 133835 . - 0 ID=Merlin_245_CDS;Parent=Merlin_245_exon;seqid=Merlin +Merlin GeneMark.hmm gene 133857 134663 -1049.900868 - . ID=Merlin_246;seqid=Merlin +Merlin GeneMark.hmm mRNA 133857 134663 . - . ID=Merlin_246_mRNA;Parent=Merlin_246;seqid=Merlin +Merlin GeneMark.hmm exon 133857 134663 . - . ID=Merlin_246_exon;Parent=Merlin_246_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 133857 134663 . - 0 ID=Merlin_246_CDS;Parent=Merlin_246_exon;seqid=Merlin +Merlin GeneMark.hmm gene 134693 137068 -3033.417419 - . ID=Merlin_247;seqid=Merlin +Merlin GeneMark.hmm mRNA 134693 137068 . - . ID=Merlin_247_mRNA;Parent=Merlin_247;seqid=Merlin +Merlin GeneMark.hmm exon 134693 137068 . - . ID=Merlin_247_exon;Parent=Merlin_247_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 134693 137068 . - 0 ID=Merlin_247_CDS;Parent=Merlin_247_exon;seqid=Merlin +Merlin GeneMark.hmm gene 137075 137734 -856.122084 - . ID=Merlin_248;seqid=Merlin +Merlin GeneMark.hmm mRNA 137075 137734 . - . ID=Merlin_248_mRNA;Parent=Merlin_248;seqid=Merlin +Merlin GeneMark.hmm exon 137075 137734 . - . ID=Merlin_248_exon;Parent=Merlin_248_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 137075 137734 . - 0 ID=Merlin_248_CDS;Parent=Merlin_248_exon;seqid=Merlin +Merlin GeneMark.hmm gene 137787 138962 -1500.330086 - . ID=Merlin_249;seqid=Merlin +Merlin GeneMark.hmm mRNA 137787 138962 . - . ID=Merlin_249_mRNA;Parent=Merlin_249;seqid=Merlin +Merlin GeneMark.hmm exon 137787 138962 . - . ID=Merlin_249_exon;Parent=Merlin_249_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 137787 138962 . - 0 ID=Merlin_249_CDS;Parent=Merlin_249_exon;seqid=Merlin +Merlin GeneMark.hmm gene 138962 142759 -4791.853068 - . ID=Merlin_250;seqid=Merlin +Merlin GeneMark.hmm mRNA 138962 142759 . - . ID=Merlin_250_mRNA;Parent=Merlin_250;seqid=Merlin +Merlin GeneMark.hmm exon 138962 142759 . - . ID=Merlin_250_exon;Parent=Merlin_250_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 138962 142759 . - 0 ID=Merlin_250_CDS;Parent=Merlin_250_exon;seqid=Merlin +Merlin GeneMark.hmm gene 142827 143753 -1151.813807 + . ID=Merlin_251;seqid=Merlin +Merlin GeneMark.hmm mRNA 142827 143753 . + . ID=Merlin_251_mRNA;Parent=Merlin_251;seqid=Merlin +Merlin GeneMark.hmm exon 142827 143753 . + . ID=Merlin_251_exon;Parent=Merlin_251_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 142827 143753 . + 0 ID=Merlin_251_CDS;Parent=Merlin_251_exon;seqid=Merlin +Merlin GeneMark.hmm gene 143743 144030 -331.847936 + . ID=Merlin_252;seqid=Merlin +Merlin GeneMark.hmm mRNA 143743 144030 . + . ID=Merlin_252_mRNA;Parent=Merlin_252;seqid=Merlin +Merlin GeneMark.hmm exon 143743 144030 . + . ID=Merlin_252_exon;Parent=Merlin_252_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 143743 144030 . + 0 ID=Merlin_252_CDS;Parent=Merlin_252_exon;seqid=Merlin +Merlin GeneMark.hmm gene 144008 144304 -369.866491 + . ID=Merlin_253;seqid=Merlin +Merlin GeneMark.hmm mRNA 144008 144304 . + . ID=Merlin_253_mRNA;Parent=Merlin_253;seqid=Merlin +Merlin GeneMark.hmm exon 144008 144304 . + . ID=Merlin_253_exon;Parent=Merlin_253_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 144008 144304 . + 0 ID=Merlin_253_CDS;Parent=Merlin_253_exon;seqid=Merlin +Merlin GeneMark.hmm gene 144301 144954 -836.139828 + . ID=Merlin_254;seqid=Merlin +Merlin GeneMark.hmm mRNA 144301 144954 . + . ID=Merlin_254_mRNA;Parent=Merlin_254;seqid=Merlin +Merlin GeneMark.hmm exon 144301 144954 . + . ID=Merlin_254_exon;Parent=Merlin_254_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 144301 144954 . + 0 ID=Merlin_254_CDS;Parent=Merlin_254_exon;seqid=Merlin +Merlin GeneMark.hmm gene 144964 145875 -1124.370545 + . ID=Merlin_255;seqid=Merlin +Merlin GeneMark.hmm mRNA 144964 145875 . + . ID=Merlin_255_mRNA;Parent=Merlin_255;seqid=Merlin +Merlin GeneMark.hmm exon 144964 145875 . + . ID=Merlin_255_exon;Parent=Merlin_255_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 144964 145875 . + 0 ID=Merlin_255_CDS;Parent=Merlin_255_exon;seqid=Merlin +Merlin GeneMark.hmm gene 145979 146218 -290.192159 + . ID=Merlin_256;seqid=Merlin +Merlin GeneMark.hmm mRNA 145979 146218 . + . ID=Merlin_256_mRNA;Parent=Merlin_256;seqid=Merlin +Merlin GeneMark.hmm exon 145979 146218 . + . ID=Merlin_256_exon;Parent=Merlin_256_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 145979 146218 . + 0 ID=Merlin_256_CDS;Parent=Merlin_256_exon;seqid=Merlin +Merlin GeneMark.hmm gene 146253 146519 -322.908748 + . ID=Merlin_257;seqid=Merlin +Merlin GeneMark.hmm mRNA 146253 146519 . + . ID=Merlin_257_mRNA;Parent=Merlin_257;seqid=Merlin +Merlin GeneMark.hmm exon 146253 146519 . + . ID=Merlin_257_exon;Parent=Merlin_257_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 146253 146519 . + 0 ID=Merlin_257_CDS;Parent=Merlin_257_exon;seqid=Merlin +Merlin GeneMark.hmm gene 146520 146744 -274.376507 + . ID=Merlin_258;seqid=Merlin +Merlin GeneMark.hmm mRNA 146520 146744 . + . ID=Merlin_258_mRNA;Parent=Merlin_258;seqid=Merlin +Merlin GeneMark.hmm exon 146520 146744 . + . ID=Merlin_258_exon;Parent=Merlin_258_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 146520 146744 . + 0 ID=Merlin_258_CDS;Parent=Merlin_258_exon;seqid=Merlin +Merlin GeneMark.hmm gene 146825 147040 -255.288456 + . ID=Merlin_259;seqid=Merlin +Merlin GeneMark.hmm mRNA 146825 147040 . + . ID=Merlin_259_mRNA;Parent=Merlin_259;seqid=Merlin +Merlin GeneMark.hmm exon 146825 147040 . + . ID=Merlin_259_exon;Parent=Merlin_259_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 146825 147040 . + 0 ID=Merlin_259_CDS;Parent=Merlin_259_exon;seqid=Merlin +Merlin GeneMark.hmm gene 147054 147419 -449.354834 + . ID=Merlin_260;seqid=Merlin +Merlin GeneMark.hmm mRNA 147054 147419 . + . ID=Merlin_260_mRNA;Parent=Merlin_260;seqid=Merlin +Merlin GeneMark.hmm exon 147054 147419 . + . ID=Merlin_260_exon;Parent=Merlin_260_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 147054 147419 . + 0 ID=Merlin_260_CDS;Parent=Merlin_260_exon;seqid=Merlin +Merlin GeneMark.hmm gene 147477 147755 -346.840279 + . ID=Merlin_261;seqid=Merlin +Merlin GeneMark.hmm mRNA 147477 147755 . + . ID=Merlin_261_mRNA;Parent=Merlin_261;seqid=Merlin +Merlin GeneMark.hmm exon 147477 147755 . + . ID=Merlin_261_exon;Parent=Merlin_261_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 147477 147755 . + 0 ID=Merlin_261_CDS;Parent=Merlin_261_exon;seqid=Merlin +Merlin GeneMark.hmm gene 147755 148078 -405.900125 + . ID=Merlin_262;seqid=Merlin +Merlin GeneMark.hmm mRNA 147755 148078 . + . ID=Merlin_262_mRNA;Parent=Merlin_262;seqid=Merlin +Merlin GeneMark.hmm exon 147755 148078 . + . ID=Merlin_262_exon;Parent=Merlin_262_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 147755 148078 . + 0 ID=Merlin_262_CDS;Parent=Merlin_262_exon;seqid=Merlin +Merlin GeneMark.hmm gene 148078 148293 -271.597843 + . ID=Merlin_263;seqid=Merlin +Merlin GeneMark.hmm mRNA 148078 148293 . + . ID=Merlin_263_mRNA;Parent=Merlin_263;seqid=Merlin +Merlin GeneMark.hmm exon 148078 148293 . + . ID=Merlin_263_exon;Parent=Merlin_263_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 148078 148293 . + 0 ID=Merlin_263_CDS;Parent=Merlin_263_exon;seqid=Merlin +Merlin GeneMark.hmm gene 148385 148636 -312.527190 + . ID=Merlin_264;seqid=Merlin +Merlin GeneMark.hmm mRNA 148385 148636 . + . ID=Merlin_264_mRNA;Parent=Merlin_264;seqid=Merlin +Merlin GeneMark.hmm exon 148385 148636 . + . ID=Merlin_264_exon;Parent=Merlin_264_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 148385 148636 . + 0 ID=Merlin_264_CDS;Parent=Merlin_264_exon;seqid=Merlin +Merlin GeneMark.hmm gene 148636 149229 -751.963856 + . ID=Merlin_265;seqid=Merlin +Merlin GeneMark.hmm mRNA 148636 149229 . + . ID=Merlin_265_mRNA;Parent=Merlin_265;seqid=Merlin +Merlin GeneMark.hmm exon 148636 149229 . + . ID=Merlin_265_exon;Parent=Merlin_265_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 148636 149229 . + 0 ID=Merlin_265_CDS;Parent=Merlin_265_exon;seqid=Merlin +Merlin GeneMark.hmm gene 149226 149555 -411.956487 + . ID=Merlin_266;seqid=Merlin +Merlin GeneMark.hmm mRNA 149226 149555 . + . ID=Merlin_266_mRNA;Parent=Merlin_266;seqid=Merlin +Merlin GeneMark.hmm exon 149226 149555 . + . ID=Merlin_266_exon;Parent=Merlin_266_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 149226 149555 . + 0 ID=Merlin_266_CDS;Parent=Merlin_266_exon;seqid=Merlin +Merlin GeneMark.hmm gene 149533 149880 -436.887846 + . ID=Merlin_267;seqid=Merlin +Merlin GeneMark.hmm mRNA 149533 149880 . + . ID=Merlin_267_mRNA;Parent=Merlin_267;seqid=Merlin +Merlin GeneMark.hmm exon 149533 149880 . + . ID=Merlin_267_exon;Parent=Merlin_267_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 149533 149880 . + 0 ID=Merlin_267_CDS;Parent=Merlin_267_exon;seqid=Merlin +Merlin GeneMark.hmm gene 149877 150737 -1096.070881 + . ID=Merlin_268;seqid=Merlin +Merlin GeneMark.hmm mRNA 149877 150737 . + . ID=Merlin_268_mRNA;Parent=Merlin_268;seqid=Merlin +Merlin GeneMark.hmm exon 149877 150737 . + . ID=Merlin_268_exon;Parent=Merlin_268_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 149877 150737 . + 0 ID=Merlin_268_CDS;Parent=Merlin_268_exon;seqid=Merlin +Merlin GeneMark.hmm gene 150734 150925 -235.875923 + . ID=Merlin_269;seqid=Merlin +Merlin GeneMark.hmm mRNA 150734 150925 . + . ID=Merlin_269_mRNA;Parent=Merlin_269;seqid=Merlin +Merlin GeneMark.hmm exon 150734 150925 . + . ID=Merlin_269_exon;Parent=Merlin_269_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 150734 150925 . + 0 ID=Merlin_269_CDS;Parent=Merlin_269_exon;seqid=Merlin +Merlin GeneMark.hmm gene 150922 151227 -402.602546 + . ID=Merlin_270;seqid=Merlin +Merlin GeneMark.hmm mRNA 150922 151227 . + . ID=Merlin_270_mRNA;Parent=Merlin_270;seqid=Merlin +Merlin GeneMark.hmm exon 150922 151227 . + . ID=Merlin_270_exon;Parent=Merlin_270_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 150922 151227 . + 0 ID=Merlin_270_CDS;Parent=Merlin_270_exon;seqid=Merlin +Merlin GeneMark.hmm gene 151218 153473 -2890.442885 + . ID=Merlin_271;seqid=Merlin +Merlin GeneMark.hmm mRNA 151218 153473 . + . ID=Merlin_271_mRNA;Parent=Merlin_271;seqid=Merlin +Merlin GeneMark.hmm exon 151218 153473 . + . ID=Merlin_271_exon;Parent=Merlin_271_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 151218 153473 . + 0 ID=Merlin_271_CDS;Parent=Merlin_271_exon;seqid=Merlin +Merlin GeneMark.hmm gene 153580 154722 -1440.286123 + . ID=Merlin_272;seqid=Merlin +Merlin GeneMark.hmm mRNA 153580 154722 . + . ID=Merlin_272_mRNA;Parent=Merlin_272;seqid=Merlin +Merlin GeneMark.hmm exon 153580 154722 . + . ID=Merlin_272_exon;Parent=Merlin_272_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 153580 154722 . + 0 ID=Merlin_272_CDS;Parent=Merlin_272_exon;seqid=Merlin +Merlin GeneMark.hmm gene 154749 155165 -537.328485 + . ID=Merlin_273;seqid=Merlin +Merlin GeneMark.hmm mRNA 154749 155165 . + . ID=Merlin_273_mRNA;Parent=Merlin_273;seqid=Merlin +Merlin GeneMark.hmm exon 154749 155165 . + . ID=Merlin_273_exon;Parent=Merlin_273_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 154749 155165 . + 0 ID=Merlin_273_CDS;Parent=Merlin_273_exon;seqid=Merlin +Merlin GeneMark.hmm gene 155162 155392 -284.548380 + . ID=Merlin_274;seqid=Merlin +Merlin GeneMark.hmm mRNA 155162 155392 . + . ID=Merlin_274_mRNA;Parent=Merlin_274;seqid=Merlin +Merlin GeneMark.hmm exon 155162 155392 . + . ID=Merlin_274_exon;Parent=Merlin_274_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 155162 155392 . + 0 ID=Merlin_274_CDS;Parent=Merlin_274_exon;seqid=Merlin +Merlin GeneMark.hmm gene 155392 156522 -1423.600588 + . ID=Merlin_275;seqid=Merlin +Merlin GeneMark.hmm mRNA 155392 156522 . + . ID=Merlin_275_mRNA;Parent=Merlin_275;seqid=Merlin +Merlin GeneMark.hmm exon 155392 156522 . + . ID=Merlin_275_exon;Parent=Merlin_275_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 155392 156522 . + 0 ID=Merlin_275_CDS;Parent=Merlin_275_exon;seqid=Merlin +Merlin GeneMark.hmm gene 156585 157088 -632.566444 + . ID=Merlin_276;seqid=Merlin +Merlin GeneMark.hmm mRNA 156585 157088 . + . ID=Merlin_276_mRNA;Parent=Merlin_276;seqid=Merlin +Merlin GeneMark.hmm exon 156585 157088 . + . ID=Merlin_276_exon;Parent=Merlin_276_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 156585 157088 . + 0 ID=Merlin_276_CDS;Parent=Merlin_276_exon;seqid=Merlin +Merlin GeneMark.hmm gene 157076 157432 -439.709209 + . ID=Merlin_277;seqid=Merlin +Merlin GeneMark.hmm mRNA 157076 157432 . + . ID=Merlin_277_mRNA;Parent=Merlin_277;seqid=Merlin +Merlin GeneMark.hmm exon 157076 157432 . + . ID=Merlin_277_exon;Parent=Merlin_277_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 157076 157432 . + 0 ID=Merlin_277_CDS;Parent=Merlin_277_exon;seqid=Merlin +Merlin GeneMark.hmm gene 157429 157734 -403.460144 + . ID=Merlin_278;seqid=Merlin +Merlin GeneMark.hmm mRNA 157429 157734 . + . ID=Merlin_278_mRNA;Parent=Merlin_278;seqid=Merlin +Merlin GeneMark.hmm exon 157429 157734 . + . ID=Merlin_278_exon;Parent=Merlin_278_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 157429 157734 . + 0 ID=Merlin_278_CDS;Parent=Merlin_278_exon;seqid=Merlin +Merlin GeneMark.hmm gene 157836 158312 -603.091441 + . ID=Merlin_279;seqid=Merlin +Merlin GeneMark.hmm mRNA 157836 158312 . + . ID=Merlin_279_mRNA;Parent=Merlin_279;seqid=Merlin +Merlin GeneMark.hmm exon 157836 158312 . + . ID=Merlin_279_exon;Parent=Merlin_279_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 157836 158312 . + 0 ID=Merlin_279_CDS;Parent=Merlin_279_exon;seqid=Merlin +Merlin GeneMark.hmm gene 158309 158668 -447.203441 + . ID=Merlin_280;seqid=Merlin +Merlin GeneMark.hmm mRNA 158309 158668 . + . ID=Merlin_280_mRNA;Parent=Merlin_280;seqid=Merlin +Merlin GeneMark.hmm exon 158309 158668 . + . ID=Merlin_280_exon;Parent=Merlin_280_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 158309 158668 . + 0 ID=Merlin_280_CDS;Parent=Merlin_280_exon;seqid=Merlin +Merlin GeneMark.hmm gene 158665 158838 -212.409539 + . ID=Merlin_281;seqid=Merlin +Merlin GeneMark.hmm mRNA 158665 158838 . + . ID=Merlin_281_mRNA;Parent=Merlin_281;seqid=Merlin +Merlin GeneMark.hmm exon 158665 158838 . + . ID=Merlin_281_exon;Parent=Merlin_281_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 158665 158838 . + 0 ID=Merlin_281_CDS;Parent=Merlin_281_exon;seqid=Merlin +Merlin GeneMark.hmm gene 158835 159731 -1132.126395 + . ID=Merlin_282;seqid=Merlin +Merlin GeneMark.hmm mRNA 158835 159731 . + . ID=Merlin_282_mRNA;Parent=Merlin_282;seqid=Merlin +Merlin GeneMark.hmm exon 158835 159731 . + . ID=Merlin_282_exon;Parent=Merlin_282_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 158835 159731 . + 0 ID=Merlin_282_CDS;Parent=Merlin_282_exon;seqid=Merlin +Merlin GeneMark.hmm gene 159731 159922 -235.781764 + . ID=Merlin_283;seqid=Merlin +Merlin GeneMark.hmm mRNA 159731 159922 . + . ID=Merlin_283_mRNA;Parent=Merlin_283;seqid=Merlin +Merlin GeneMark.hmm exon 159731 159922 . + . ID=Merlin_283_exon;Parent=Merlin_283_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 159731 159922 . + 0 ID=Merlin_283_CDS;Parent=Merlin_283_exon;seqid=Merlin +Merlin GeneMark.hmm gene 159922 160137 -267.519915 + . ID=Merlin_284;seqid=Merlin +Merlin GeneMark.hmm mRNA 159922 160137 . + . ID=Merlin_284_mRNA;Parent=Merlin_284;seqid=Merlin +Merlin GeneMark.hmm exon 159922 160137 . + . ID=Merlin_284_exon;Parent=Merlin_284_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 159922 160137 . + 0 ID=Merlin_284_CDS;Parent=Merlin_284_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160137 160436 -372.267833 + . ID=Merlin_285;seqid=Merlin +Merlin GeneMark.hmm mRNA 160137 160436 . + . ID=Merlin_285_mRNA;Parent=Merlin_285;seqid=Merlin +Merlin GeneMark.hmm exon 160137 160436 . + . ID=Merlin_285_exon;Parent=Merlin_285_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160137 160436 . + 0 ID=Merlin_285_CDS;Parent=Merlin_285_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160414 160641 -289.957825 + . ID=Merlin_286;seqid=Merlin +Merlin GeneMark.hmm mRNA 160414 160641 . + . ID=Merlin_286_mRNA;Parent=Merlin_286;seqid=Merlin +Merlin GeneMark.hmm exon 160414 160641 . + . ID=Merlin_286_exon;Parent=Merlin_286_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160414 160641 . + 0 ID=Merlin_286_CDS;Parent=Merlin_286_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160638 160985 -435.855402 + . ID=Merlin_287;seqid=Merlin +Merlin GeneMark.hmm mRNA 160638 160985 . + . ID=Merlin_287_mRNA;Parent=Merlin_287;seqid=Merlin +Merlin GeneMark.hmm exon 160638 160985 . + . ID=Merlin_287_exon;Parent=Merlin_287_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160638 160985 . + 0 ID=Merlin_287_CDS;Parent=Merlin_287_exon;seqid=Merlin +Merlin GeneMark.hmm gene 160986 161549 -716.263909 + . ID=Merlin_288;seqid=Merlin +Merlin GeneMark.hmm mRNA 160986 161549 . + . ID=Merlin_288_mRNA;Parent=Merlin_288;seqid=Merlin +Merlin GeneMark.hmm exon 160986 161549 . + . ID=Merlin_288_exon;Parent=Merlin_288_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 160986 161549 . + 0 ID=Merlin_288_CDS;Parent=Merlin_288_exon;seqid=Merlin +Merlin GeneMark.hmm gene 161546 161848 -371.966910 + . ID=Merlin_289;seqid=Merlin +Merlin GeneMark.hmm mRNA 161546 161848 . + . ID=Merlin_289_mRNA;Parent=Merlin_289;seqid=Merlin +Merlin GeneMark.hmm exon 161546 161848 . + . ID=Merlin_289_exon;Parent=Merlin_289_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 161546 161848 . + 0 ID=Merlin_289_CDS;Parent=Merlin_289_exon;seqid=Merlin +Merlin GeneMark.hmm gene 161845 162081 -287.849916 + . ID=Merlin_290;seqid=Merlin +Merlin GeneMark.hmm mRNA 161845 162081 . + . ID=Merlin_290_mRNA;Parent=Merlin_290;seqid=Merlin +Merlin GeneMark.hmm exon 161845 162081 . + . ID=Merlin_290_exon;Parent=Merlin_290_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 161845 162081 . + 0 ID=Merlin_290_CDS;Parent=Merlin_290_exon;seqid=Merlin +Merlin GeneMark.hmm gene 162074 162391 -387.962641 + . ID=Merlin_291;seqid=Merlin +Merlin GeneMark.hmm mRNA 162074 162391 . + . ID=Merlin_291_mRNA;Parent=Merlin_291;seqid=Merlin +Merlin GeneMark.hmm exon 162074 162391 . + . ID=Merlin_291_exon;Parent=Merlin_291_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 162074 162391 . + 0 ID=Merlin_291_CDS;Parent=Merlin_291_exon;seqid=Merlin +Merlin GeneMark.hmm gene 162449 162775 -406.965469 + . ID=Merlin_292;seqid=Merlin +Merlin GeneMark.hmm mRNA 162449 162775 . + . ID=Merlin_292_mRNA;Parent=Merlin_292;seqid=Merlin +Merlin GeneMark.hmm exon 162449 162775 . + . ID=Merlin_292_exon;Parent=Merlin_292_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 162449 162775 . + 0 ID=Merlin_292_CDS;Parent=Merlin_292_exon;seqid=Merlin +Merlin GeneMark.hmm gene 162905 163159 -321.120824 + . ID=Merlin_293;seqid=Merlin +Merlin GeneMark.hmm mRNA 162905 163159 . + . ID=Merlin_293_mRNA;Parent=Merlin_293;seqid=Merlin +Merlin GeneMark.hmm exon 162905 163159 . + . ID=Merlin_293_exon;Parent=Merlin_293_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 162905 163159 . + 0 ID=Merlin_293_CDS;Parent=Merlin_293_exon;seqid=Merlin +Merlin GeneMark.hmm gene 163465 163644 -217.336356 + . ID=Merlin_294;seqid=Merlin +Merlin GeneMark.hmm mRNA 163465 163644 . + . ID=Merlin_294_mRNA;Parent=Merlin_294;seqid=Merlin +Merlin GeneMark.hmm exon 163465 163644 . + . ID=Merlin_294_exon;Parent=Merlin_294_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 163465 163644 . + 0 ID=Merlin_294_CDS;Parent=Merlin_294_exon;seqid=Merlin +Merlin GeneMark.hmm gene 163764 164132 -441.864606 + . ID=Merlin_295;seqid=Merlin +Merlin GeneMark.hmm mRNA 163764 164132 . + . ID=Merlin_295_mRNA;Parent=Merlin_295;seqid=Merlin +Merlin GeneMark.hmm exon 163764 164132 . + . ID=Merlin_295_exon;Parent=Merlin_295_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 163764 164132 . + 0 ID=Merlin_295_CDS;Parent=Merlin_295_exon;seqid=Merlin +Merlin GeneMark.hmm gene 164158 164646 -602.734029 + . ID=Merlin_296;seqid=Merlin +Merlin GeneMark.hmm mRNA 164158 164646 . + . ID=Merlin_296_mRNA;Parent=Merlin_296;seqid=Merlin +Merlin GeneMark.hmm exon 164158 164646 . + . ID=Merlin_296_exon;Parent=Merlin_296_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 164158 164646 . + 0 ID=Merlin_296_CDS;Parent=Merlin_296_exon;seqid=Merlin +Merlin GeneMark.hmm gene 164715 165071 -451.064481 + . ID=Merlin_297;seqid=Merlin +Merlin GeneMark.hmm mRNA 164715 165071 . + . ID=Merlin_297_mRNA;Parent=Merlin_297;seqid=Merlin +Merlin GeneMark.hmm exon 164715 165071 . + . ID=Merlin_297_exon;Parent=Merlin_297_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 164715 165071 . + 0 ID=Merlin_297_CDS;Parent=Merlin_297_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165107 165601 -618.360781 + . ID=Merlin_298;seqid=Merlin +Merlin GeneMark.hmm mRNA 165107 165601 . + . ID=Merlin_298_mRNA;Parent=Merlin_298;seqid=Merlin +Merlin GeneMark.hmm exon 165107 165601 . + . ID=Merlin_298_exon;Parent=Merlin_298_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165107 165601 . + 0 ID=Merlin_298_CDS;Parent=Merlin_298_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165612 165773 -191.091430 + . ID=Merlin_299;seqid=Merlin +Merlin GeneMark.hmm mRNA 165612 165773 . + . ID=Merlin_299_mRNA;Parent=Merlin_299;seqid=Merlin +Merlin GeneMark.hmm exon 165612 165773 . + . ID=Merlin_299_exon;Parent=Merlin_299_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165612 165773 . + 0 ID=Merlin_299_CDS;Parent=Merlin_299_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165770 166000 -285.030914 + . ID=Merlin_300;seqid=Merlin +Merlin GeneMark.hmm mRNA 165770 166000 . + . ID=Merlin_300_mRNA;Parent=Merlin_300;seqid=Merlin +Merlin GeneMark.hmm exon 165770 166000 . + . ID=Merlin_300_exon;Parent=Merlin_300_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165770 166000 . + 0 ID=Merlin_300_CDS;Parent=Merlin_300_exon;seqid=Merlin +Merlin GeneMark.hmm gene 165997 166191 -241.609251 + . ID=Merlin_301;seqid=Merlin +Merlin GeneMark.hmm mRNA 165997 166191 . + . ID=Merlin_301_mRNA;Parent=Merlin_301;seqid=Merlin +Merlin GeneMark.hmm exon 165997 166191 . + . ID=Merlin_301_exon;Parent=Merlin_301_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 165997 166191 . + 0 ID=Merlin_301_CDS;Parent=Merlin_301_exon;seqid=Merlin +Merlin GeneMark.hmm gene 166352 167200 -1091.167753 + . ID=Merlin_302;seqid=Merlin +Merlin GeneMark.hmm mRNA 166352 167200 . + . ID=Merlin_302_mRNA;Parent=Merlin_302;seqid=Merlin +Merlin GeneMark.hmm exon 166352 167200 . + . ID=Merlin_302_exon;Parent=Merlin_302_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 166352 167200 . + 0 ID=Merlin_302_CDS;Parent=Merlin_302_exon;seqid=Merlin +Merlin GeneMark.hmm gene 167197 167433 -294.645060 + . ID=Merlin_303;seqid=Merlin +Merlin GeneMark.hmm mRNA 167197 167433 . + . ID=Merlin_303_mRNA;Parent=Merlin_303;seqid=Merlin +Merlin GeneMark.hmm exon 167197 167433 . + . ID=Merlin_303_exon;Parent=Merlin_303_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 167197 167433 . + 0 ID=Merlin_303_CDS;Parent=Merlin_303_exon;seqid=Merlin +Merlin GeneMark.hmm gene 167487 168944 -1811.170385 + . ID=Merlin_304;seqid=Merlin +Merlin GeneMark.hmm mRNA 167487 168944 . + . ID=Merlin_304_mRNA;Parent=Merlin_304;seqid=Merlin +Merlin GeneMark.hmm exon 167487 168944 . + . ID=Merlin_304_exon;Parent=Merlin_304_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 167487 168944 . + 0 ID=Merlin_304_CDS;Parent=Merlin_304_exon;seqid=Merlin +Merlin GeneMark.hmm gene 168941 169120 -220.159549 + . ID=Merlin_305;seqid=Merlin +Merlin GeneMark.hmm mRNA 168941 169120 . + . ID=Merlin_305_mRNA;Parent=Merlin_305;seqid=Merlin +Merlin GeneMark.hmm exon 168941 169120 . + . ID=Merlin_305_exon;Parent=Merlin_305_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 168941 169120 . + 0 ID=Merlin_305_CDS;Parent=Merlin_305_exon;seqid=Merlin +Merlin GeneMark.hmm gene 169175 171265 -2617.092758 + . ID=Merlin_306;seqid=Merlin +Merlin GeneMark.hmm mRNA 169175 171265 . + . ID=Merlin_306_mRNA;Parent=Merlin_306;seqid=Merlin +Merlin GeneMark.hmm exon 169175 171265 . + . ID=Merlin_306_exon;Parent=Merlin_306_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 169175 171265 . + 0 ID=Merlin_306_CDS;Parent=Merlin_306_exon;seqid=Merlin +Merlin GeneMark.hmm gene 171301 172788 -1876.322043 + . ID=Merlin_307;seqid=Merlin +Merlin GeneMark.hmm mRNA 171301 172788 . + . ID=Merlin_307_mRNA;Parent=Merlin_307;seqid=Merlin +Merlin GeneMark.hmm exon 171301 172788 . + . ID=Merlin_307_exon;Parent=Merlin_307_mRNA;seqid=Merlin +Merlin GeneMark.hmm CDS 171301 172788 . + 0 ID=Merlin_307_CDS;Parent=Merlin_307_exon;seqid=Merlin diff -r e7a6f7a7148d -r ab0d6782a95f test-data/vcf/test.vcf --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/vcf/test.vcf Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,23 @@ +##fileformat=VCFv4.0 +##fileDate=20090805 +##source=myImputationProgramV3.1 +##reference=1000GenomesPilot-NCBI36 +##phasing=partial +##INFO= +##INFO= +##INFO= +##INFO= +##INFO= +##INFO= +##FILTER= +##FILTER= +##FORMAT= +##FORMAT= +##FORMAT= +##FORMAT= +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA00001 NA00002 NA00003 +Merlin 14370 rs6054257 G A 29 PASS NS=3;DP=14;AF=0.5;DB;H2 GT:GQ:DP:HQ 0|0:48:1:51,51 1|0:48:8:51,51 1/1:43:5:.,. +Merlin 17330 . T A 3 q10 NS=3;DP=11;AF=0.017 GT:GQ:DP:HQ 0|0:49:3:58,50 0|1:3:5:65,3 0/0:41:3 +Merlin 1110696 rs6040355 A G,T 67 PASS NS=2;DP=10;AF=0.333,0.667;AA=T;DB GT:GQ:DP:HQ 1|2:21:6:23,27 2|1:2:0:18,2 2/2:35:4 +Merlin 1230237 . T . 47 PASS NS=3;DP=13;AA=T GT:GQ:DP:HQ 0|0:54:7:56,60 0|0:48:4:51,51 0/0:61:2 +Merlin 1234567 microsat1 GTCT G,GTACT 50 PASS NS=3;DP=9;AA=G GT:GQ:DP 0/1:35:4 0/2:17:2 1/1:40:3 diff -r e7a6f7a7148d -r ab0d6782a95f test-data/xmfa.gff --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/xmfa.gff Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,5918 @@ +##gff-version 3 +##sequence-region Merlin 1 172788 +Merlin progressiveMauve match 123963 171642 . - . ID=HM137666;Target=HM137666 +Merlin progressiveMauve match_part 123963 123982 80 + . Parent=HM137666 +Merlin progressiveMauve match_part 123983 124032 62 + . Parent=HM137666 +Merlin progressiveMauve match_part 124033 124082 86 + . Parent=HM137666 +Merlin progressiveMauve match_part 124083 124132 72 + . Parent=HM137666 +Merlin progressiveMauve match_part 124133 124182 78 + . Parent=HM137666 +Merlin progressiveMauve match_part 124183 124232 70 + . Parent=HM137666 +Merlin progressiveMauve match_part 124233 124282 48 + . Parent=HM137666 +Merlin progressiveMauve match_part 124283 124329 42.5531914894 + . Parent=HM137666 +Merlin progressiveMauve match_part 124469 124494 73.0769230769 + . Parent=HM137666 +Merlin progressiveMauve match_part 124495 124544 56 + . Parent=HM137666 +Merlin progressiveMauve match_part 124601 124650 56 + . Parent=HM137666 +Merlin progressiveMauve match_part 124651 124700 54 + . Parent=HM137666 +Merlin progressiveMauve match_part 124701 124750 56 + . Parent=HM137666 +Merlin progressiveMauve match_part 124751 124796 56.5217391304 + . Parent=HM137666 +Merlin progressiveMauve match_part 124797 124846 14 + . Parent=HM137666 +Merlin progressiveMauve match_part 124847 124868 27.2727272727 + . Parent=HM137666 +Merlin progressiveMauve match_part 124869 124918 68 + . Parent=HM137666 +Merlin progressiveMauve match_part 124919 124964 45.652173913 + . Parent=HM137666 +Merlin progressiveMauve match_part 124965 125009 55.5555555556 + . Parent=HM137666 +Merlin progressiveMauve match_part 125010 125059 58 + . Parent=HM137666 +Merlin progressiveMauve match_part 125060 125077 33.3333333333 + . Parent=HM137666 +Merlin progressiveMauve match_part 125078 125127 64 + . Parent=HM137666 +Merlin progressiveMauve match_part 125128 125177 26 + . Parent=HM137666 +Merlin progressiveMauve match_part 125744 125793 66 + . Parent=HM137666 +Merlin progressiveMauve match_part 125794 125843 70 + . Parent=HM137666 +Merlin progressiveMauve match_part 125844 125893 64 + . Parent=HM137666 +Merlin progressiveMauve match_part 125894 125943 50 + . Parent=HM137666 +Merlin progressiveMauve match_part 125944 125993 54 + . Parent=HM137666 +Merlin progressiveMauve match_part 125994 126043 52 + . Parent=HM137666 +Merlin progressiveMauve match_part 126044 126093 74 + . 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Parent=NC_000866 +Merlin progressiveMauve match_part 164262 164311 64 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164312 164361 30 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164648 164676 72.4137931034 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164677 164726 72 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164727 164776 64 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164777 164826 80 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164827 164876 74 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164877 164926 56 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164927 164972 54.347826087 + . Parent=NC_000866 +Merlin progressiveMauve match_part 164973 165021 30.612244898 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165280 165325 65.2173913043 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165399 165444 60.8695652174 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165445 165494 62 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165495 165544 58 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165545 165594 66 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165595 165644 64 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165645 165694 66 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165695 165744 80 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165745 165794 72 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165795 165844 80 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165845 165894 58 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165895 165944 58 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165945 165994 74 + . Parent=NC_000866 +Merlin progressiveMauve match_part 165995 166042 89.5833333333 + . Parent=NC_000866 +Merlin progressiveMauve match_part 166043 166091 65.306122449 + . Parent=NC_000866 +Merlin progressiveMauve match_part 166092 166141 6 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167295 167333 64.1025641026 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167334 167383 60 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167384 167433 70 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167434 167483 56 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167484 167533 68 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167534 167580 63.829787234 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167581 167630 78 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167631 167678 66.6666666667 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167679 167728 60 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167729 167776 56.25 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167777 167826 70 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167827 167876 60 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167877 167926 78 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167927 167976 66 + . Parent=NC_000866 +Merlin progressiveMauve match_part 167977 168026 58 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168027 168074 58.3333333333 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168075 168124 78 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168125 168174 78 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168175 168224 70 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168225 168274 78 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168275 168324 82 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168325 168374 84 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168375 168424 84 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168425 168474 78 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168475 168524 82 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168525 168574 68 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168575 168624 70 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168625 168674 66 + . Parent=NC_000866 +Merlin progressiveMauve match_part 168675 168724 40 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169065 169092 60.7142857143 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169093 169142 74 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169143 169192 58 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169193 169242 60 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169243 169292 62 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169293 169342 68 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169343 169374 59.375 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169375 169423 63.2653061224 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169424 169473 70 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169474 169523 70 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169524 169573 54 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169574 169623 54 + . Parent=NC_000866 +Merlin progressiveMauve match_part 169624 169673 40 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170000 170040 68.2926829268 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170041 170082 76.1904761905 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170083 170132 70 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170133 170182 56 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170183 170232 68 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170233 170282 72 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170283 170332 68 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170333 170382 72 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170383 170431 61.2244897959 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170432 170473 52.380952381 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170474 170523 58 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170524 170573 64 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170574 170623 42 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170824 170849 38.4615384615 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170850 170898 63.2653061224 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170899 170948 56 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170949 170991 67.4418604651 + . Parent=NC_000866 +Merlin progressiveMauve match_part 170992 171040 46.9387755102 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171041 171090 52 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171091 171123 69.696969697 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171124 171167 79.5454545455 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171168 171217 78 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171218 171264 57.4468085106 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171265 171314 68 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171315 171364 68 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171365 171414 64 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171415 171464 76 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171465 171514 76 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171515 171564 80 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171565 171614 66 + . Parent=NC_000866 +Merlin progressiveMauve match_part 171615 171642 53.5714285714 + . Parent=NC_000866 +### diff -r e7a6f7a7148d -r ab0d6782a95f tool_data_table_conf.xml.test --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.test Thu Mar 28 04:51:06 2024 +0000 @@ -0,0 +1,7 @@ + + + + value, dbkey, name, path + +
+