Mercurial > repos > fubar > jbrowse2
changeset 46:4181e97c70a7 draft
planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit 3a43e9e0ffce0966101203102e769d1ced28618a
| author | fubar |
|---|---|
| date | Mon, 04 Mar 2024 09:47:19 +0000 |
| parents | 0ec526d2d8c1 |
| children | 3e53204c2419 |
| files | __pycache__/jbrowse2.cpython-310.pyc autogenJB2.py autogenJB2.xml jb2_webserver.py jbrowse2.py jbrowse2.xml klBraLanc5.haps_combined.decontam.20230620.fasta.fa.gz macros.xml readme.rst test-data/gff3/merlin.gff3 test-data/vcf/merlin.vcf |
| diffstat | 11 files changed, 538 insertions(+), 1472 deletions(-) [+] |
line wrap: on
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--- a/autogenJB2.py Fri Mar 01 05:15:41 2024 +0000 +++ b/autogenJB2.py Mon Mar 04 09:47:19 2024 +0000 @@ -1,5 +1,6 @@ import argparse import logging +import os import sys from jbrowse2 import JbrowseConnector as jbC @@ -11,8 +12,7 @@ def makeDefaultLocation(): refName = jc.genome_firstcontig - defloc = "%s:100..10000" % refName - print ('defloc',defloc) + defloc = "%s:100..10000" % refName return defloc @@ -21,61 +21,66 @@ parser.add_argument("--sessName", help="Session name", default="AutoJBrowse") parser.add_argument( "--trackmeta", - help="Repeatable of 'filename, filext,filepath, ... ,' for JBrowse2 tracks", + help="Repeatable 'filename,filext,filepath,[bai/crai path for filesystem bam/cram]' for JBrowse2 tracks", default=[], action="append", ) parser.add_argument( "--referencemeta", - help="Repeatable 'filename, filext, filepath, ... ,' for JBrowse2 reference tracks", + help="Repeatable 'filename, filext, filepath, ... ,' for JBrowse2 reference tracks - usually only one needed", default=[], action="append", ) parser.add_argument( "--pafmeta", - help="Repeatable. Each is a 'filename, filext, filepath, ... ,' for a JBrowse2 paf track", + help="Repeatable. Each is a 'pafname, filext, filepath, ... ,' for a JBrowse2 paf track", default=[], action="append", ) parser.add_argument( "--pafreferencemeta", - help="Repeatable. Each is a 'pafname,filepath,refname,filepath,refname....'. Every paf must have a corresponding one ", + help="Repeatable. Each is a 'pafname,refpath,refname' Every pafname must have one or more", default=[], action="append", ) - parser.add_argument("--jbrowse2path", help="Path to JBrowse2 directory in biocontainer or Conda") + parser.add_argument( + "--jbrowse2path", help="Path to JBrowse2 directory in biocontainer or Conda" + ) parser.add_argument("--outdir", help="Output directory", required=True) parser.add_argument("--version", "-V", action="version", version="%(prog)s 2.10.2") args = parser.parse_args() sessName = args.sessName # --trackmeta $jbrowseme[$key],$jbrowseme[$key].ext,'$key' - trackList = [x.strip().split(",") for x in args.trackmeta if x > ''] - refList = [x.strip().split(",") for x in args.referencemeta if x > ''] - print("tracklist = %s\nreflist = %s" % (trackList,refList)) + trackList = [x.strip().split(",") for x in args.trackmeta if x > ""] + refList = [x.strip().split(",") for x in args.referencemeta if x > ""] if len(refList) > 0: - listgenomes = [f for f in refList if f[1] in ['fasta', 'fasta.gz']] + listgenomes = [f for f in refList if f[1] in ["fasta", "fasta.gz"]] # assume no pafs here - print('genomes=%s' % listgenomes) if len(listgenomes) > 0: - genome_paths = [ - x[0] for x in listgenomes - ] # expect genome_1_genomename.fasta etc + genome_paths = [x[0] for x in listgenomes] genome_names = [x[2] for x in listgenomes] + guseuri = [] + for x in genome_paths: + if x.startswith('http://') or x.startswith('https://'): + guseuri.append('yes') + else: + guseuri.append('no') jc = jbC( outdir=args.outdir, jbrowse2path=args.jbrowse2path, genomes=[ { "path": x, - "meta": { - "name": genome_names[i], - "dataset_dname": genome_names[i], - }, + "label": genome_names[i], + "useuri": guseuri[i], + "meta": {"name": genome_names[i], + "dataset_dname": genome_names[i] + } } for i, x in enumerate(genome_paths) ], ) - sys.stdout.write('$$$ genome_paths:%s genome_names: %s' % (genome_paths,genome_names)) + jc.process_genomes() default_session_data = { "visibility": { @@ -109,33 +114,52 @@ } } } - elif trext == 'bam': - track_conf = {"conf": {"options": {"bam": {"bam_index": track[3]}}}} - elif trext == 'cram': - track_conf = {"conf": {"options": {"cram": {"cram_index": track[3]}}}} + elif trext == "bam": + ipath = track[3] + if not os.path.exists(ipath): + ipath = os.path.realpath(os.path.join(jc.outdir, trackname + '.bai')) + cmd = ["samtools", "index", "-b", "-o", ipath, os.path.realpath(track[0])] + sys.stdout.write('#### calling %s' % ' '.join(cmd)) + jc.subprocess_check_call(cmd) + track_conf = {"conf": {"options": {"bam": {"bam_index": ipath}}}} + elif trext == "cram": + ipath = track[3] + if not os.path.exists(ipath): + jc.logging.info('calling %s' % ' '.join(cmd)) + ipath = os.path.realpath(os.path.join('./', trackname + '.crai')) + cmd = ["samtools", "index", "-c", "-o", ipath, os.path.realpath(track[0])] + sys.stdout.write('#### calling %s' % ' '.join(cmd)) + jc.subprocess_check_call(cmd) + track_conf = {"conf": {"options": {"cram": {"cram_index": ipath}}}} else: track_conf = {} track_conf["format"] = trext track_conf["name"] = trackname track_conf["label"] = trackname - track_conf["trackfiles"] = [(tpath, trext, trackname,{}),] + useu = tpath.startswith('http://') or tpath.startswith('https://') + useuri = 'no' + if useu: + useuri = 'yes' + track_conf["trackfiles"] = [ + (tpath, trext, useuri, trackname, {}), + ] track_conf["category"] = "Autogenerated" keys = jc.process_annotations(track_conf) if keys: for key in keys: - if trext in ["bigwig", "gff3", "gff", "vcf", "maf",]: + if trext in [ + "bigwig", + "gff3", + "gff", + "vcf", + "maf", + ]: default_session_data["visibility"]["default_on"].append(key) else: - default_session_data["visibility"]["default_off"].append(key) - # if track_conf.get("style", None): - # default_session_data["style"][key] = track_conf[ - # "style" - # ] # TODO do we need this anymore? - # if track_conf.get("style_lables", None): - # default_session_data["style_labels"][key] = track_conf.get( - # "style_labels", None - # ) + default_session_data["visibility"]["default_off"].append( + key + ) # general_data = { # "analytics": root.find("metadata/general/analytics").text, # "primary_color": root.find("metadata/general/primary_color").text, @@ -152,9 +176,13 @@ jc.config_json["tracks"] = jc.tracksToAdd jc.write_config() defLoc = makeDefaultLocation() - default_session_data.update({"defaultLocation": defLoc, "session_name": sessName}) + default_session_data.update( + {"defaultLocation": defLoc, "session_name": sessName} + ) track_conf.update(default_session_data) jc.add_default_session(default_session_data) # jc.text_index() not sure what broke here. else: - print("!! empty collection supplied - nothing to process") + sys.stderr.write( + "!!!! Collection has no suitable trackfiles for autogenJB2 - nothing to process" + )
--- a/autogenJB2.xml Fri Mar 01 05:15:41 2024 +0000 +++ b/autogenJB2.xml Mon Mar 04 09:47:19 2024 +0000 @@ -13,7 +13,17 @@ export JBROWSE2_PATH=\$(dirname \$(which jbrowse))/../opt/jbrowse2 && python '$__tool_directory__/autogenJB2.py' #for $key in $autoCollection.keys(): - #if $autoCollection[$key].ext == 'fasta': + #if $autoCollection[$key].is_collection: + #set subCol=$autoCollection[$key] + #set pafs=[($subCol[x],$subcol[x].ext,x) for x in $subCol.keys() if $subCol[x].ext == 'paf'] + #if len($pafs) > 0: + --pafmeta '$pafs[0]' + #set refs = [($pafs[0][2],$subCol[x],x) for x in $subCol.keys() if $subCol[x].ext == 'fasta'] + #for $ref in $refs: + --pafreferencemeta '$ref' + #end for + #end if + #else if $autoCollection[$key].ext == 'fasta': --referencemeta '$autoCollection[$key],$autoCollection[$key].ext,$key' #else if $autoCollection[$key].ext in ['bed', 'bigwig', 'cool', 'gff', 'gff3', 'hic', 'maf', 'mcool', 'scool', 'vcf'] --trackmeta '$autoCollection[$key],$autoCollection[$key].ext,$key' @@ -45,23 +55,21 @@ <data format="html" name="output" label="AutoJBrowse2"/> </outputs> <tests> - <test> + <test> <param name="uglyTestingHack" value="enabled" /> <param name="autoCollection"> <collection type="list"> <element name="Merlin" value="merlin.fa" ftype="fasta"/> - <element name="merlin-sample.bam" value="bam/merlin-sample.bam" ftype="bam"/> + <element name="test-6.bed" value="bed/test-6.bed" ftype="bed"/> </collection> </param> - <output name="output"> - <assert_contents> - <has_text text='"name": "Merlin",'/> - <has_text text='"name": "merlin-sample.bam",'/> - <has_text text='"uri": "Merlin.fa.gz.fai"'/> - <has_text text='"uri": "bam_0_merlin-sample.bam.bam.bai"'/> - - </assert_contents> - </output> + <output name="output"> + <assert_contents> + <has_text text='"name": "Merlin",'/> + <has_text text='"name": "test-6.bed",'/> + <has_text text='"uri": "Merlin.fa.gz.fai"'/> + </assert_contents> + </output> </test> </tests> <help><![CDATA[
--- a/jb2_webserver.py Fri Mar 01 05:15:41 2024 +0000 +++ b/jb2_webserver.py Mon Mar 04 09:47:19 2024 +0000 @@ -42,7 +42,7 @@ from http.server import SimpleHTTPRequestHandler -DEFAULT_PORT = 8080 +DEFAULT_PORT = 8081 def copy_byte_range(infile, outfile, start=None, stop=None, bufsize=16 * 1024): @@ -156,7 +156,7 @@ if __name__ == "__main__": parser = argparse.ArgumentParser( - description="Simple Python Web Server with Range Support" + description="Tiny Python Web Server supporting range requests, for local viewing of unzipped Galaxy JBrowse2 configurations" ) parser.add_argument( "--root",
--- a/jbrowse2.py Fri Mar 01 05:15:41 2024 +0000 +++ b/jbrowse2.py Mon Mar 04 09:47:19 2024 +0000 @@ -11,6 +11,7 @@ import struct import subprocess import tempfile +import urllib.request import xml.etree.ElementTree as ET from collections import defaultdict @@ -446,7 +447,10 @@ def process_genomes(self): assemblies = [] + useuri = False for i, genome_node in enumerate(self.genome_paths): + if genome_node["useuri"].strip().lower() == "yes": + useuri = True genome_name = genome_node["meta"]["dataset_dname"].strip() if len(genome_name.split()) > 1: genome_name = genome_name.split()[0] @@ -454,7 +458,9 @@ if genome_name not in self.genome_names: # ignore dupes - can have multiple pafs with same references? fapath = genome_node["path"] - assem = self.make_assembly(fapath, genome_name) + if not useuri: + fapath = os.path.realpath(fapath) + assem = self.make_assembly(fapath, genome_name, useuri) assemblies.append(assem) self.genome_names.append(genome_name) if self.genome_name is None: @@ -462,41 +468,67 @@ genome_name # first one for all tracks - other than paf ) self.genome_firstcontig = None - fl = open(fapath, "r").readline().strip().split(">") - if len(fl) > 1: - fl = fl[1] - if len(fl.split()) > 1: - self.genome_firstcontig = fl.split()[0].strip() + if not useuri: + # https://lazarus.name/jbrowse/fish/bigwig_0_coverage_bedgraph_cov_count_count_bw.bigwig + # https://lazarus.name/jbrowse/fish/klBraLanc5.haps_combined.decontam.20230620.fasta.fa.gz + fl = open(fapath, "r").readline() + fls = fl.strip().split(">") + if len(fls) > 1: + fl = fls[1] + if len(fl.split()) > 1: + self.genome_firstcontig = fl.split()[0].strip() + else: + self.genome_firstcontig = fl else: - self.genome_firstcontig = fl + fl = urrlib.request.urlopen(faname+".fai").readline() + if fl: # is first row of the text fai so the first contig name + self.genome_firstcontig = fl.decode('utf8').strip().split()[0] if self.config_json.get("assemblies", None): self.config_json["assemblies"] += assemblies else: self.config_json["assemblies"] = assemblies - def make_assembly(self, fapath, gname): + def make_assembly(self, fapath, gname, useuri): + if useuri: + faname = fapath + adapter = { + "type": "BgzipFastaAdapter", + "fastaLocation": { + "uri": faname, + "locationType": "UriLocation", + }, + "faiLocation": { + "uri": faname + ".fai", + "locationType": "UriLocation", + }, + "gziLocation": { + "uri": faname + ".gzi", + "locationType": "UriLocation", + }, + } + else: + faname = gname + ".fa.gz" + fadest = os.path.realpath(os.path.join(self.outdir, faname)) + cmd = "bgzip -i -c %s -I %s.gzi > %s && samtools faidx %s" % ( + fapath, + fadest, + fadest, + fadest, + ) + self.subprocess_popen(cmd) - faname = gname + ".fa.gz" - fadest = os.path.realpath(os.path.join(self.outdir, faname)) - cmd = "bgzip -i -c %s -I %s.gzi > %s && samtools faidx %s" % ( - fapath, - fadest, - fadest, - fadest, - ) - self.subprocess_popen(cmd) - adapter = { - "type": "BgzipFastaAdapter", - "fastaLocation": { - "uri": faname, - }, - "faiLocation": { - "uri": faname + ".fai", - }, - "gziLocation": { - "uri": faname + ".gzi", - }, - } + adapter = { + "type": "BgzipFastaAdapter", + "fastaLocation": { + "uri": faname, + }, + "faiLocation": { + "uri": faname + ".fai", + }, + "gziLocation": { + "uri": faname + ".gzi", + }, + } self.genome_sequence_adapter = adapter trackDict = { "name": gname, @@ -528,7 +560,7 @@ def write_config(self): with open(self.config_json_file, "w") as fp: - json.dump(self.config_json, fp) + json.dump(self.config_json, fp, indent=2) def text_index(self): # Index tracks @@ -567,18 +599,19 @@ # can be served - if public. # dsId = trackData["metadata"]["dataset_id"] # url = "%s/api/datasets/%s/display?to_ext=hic " % (self.giURL, dsId) - hname = trackData["hic_url"] - floc = { - "uri": hname, - } + useuri = trackData["useuri"].lower() == "yes" + if useuri: + uri = data + else: + uri = trackData["hic_url"] trackDict = { "type": "HicTrack", "trackId": tId, - "name": hname, + "name": uri, "assemblyNames": [self.genome_name], "adapter": { "type": "HicAdapter", - "hicLocation": floc, + "hicLocation": uri, }, "displays": [ { @@ -599,6 +632,7 @@ e.g. hg38.chr1 in the sequence identifiers. need the reference id - eg hg18, for maf2bed.pl as the first parameter """ + tId = trackData["label"] mafPlugin = { "plugins": [ { @@ -607,7 +641,7 @@ } ] } - tId = trackData["label"] + fname = "%s.bed" % tId dest = "%s/%s" % (self.outdir, fname) gname = self.genome_name @@ -744,11 +778,15 @@ "negColor": "rgb(255, 255, 51)", "constraints": {} """ - url = "%s.bigwig" % trackData["label"] - # slashes in names cause path trouble - dest = os.path.join(self.outdir, url) - cmd = ["cp", data, dest] - self.subprocess_check_call(cmd) + useuri = trackData["useuri"].lower() == "yes" + if useuri: + url = data + else: + url = "%s.bigwig" % trackData["label"] + # slashes in names cause path trouble + dest = os.path.join(self.outdir, url) + cmd = ["cp", data, dest] + self.subprocess_check_call(cmd) bwloc = {"uri": url} tId = trackData["label"] trackDict = { @@ -774,27 +812,33 @@ self.tracksToAdd.append(trackDict) self.trackIdlist.append(tId) - def add_bam(self, data, trackData, bamOpts, bam_index=None, **kwargs): + def add_bam(self, data, trackData, bam_index=None, **kwargs): tId = trackData["label"] - fname = "%s.bam" % trackData["label"] - dest = "%s/%s" % (self.outdir, fname) - url = fname - self.subprocess_check_call(["cp", data, dest]) - bloc = {"uri": url} - if bam_index is not None and os.path.exists(os.path.realpath(bam_index)): - # bai most probably made by galaxy and stored in galaxy dirs, need to copy it to dest - self.subprocess_check_call( - ["cp", os.path.realpath(bam_index), dest + ".bai"] - ) + useuri = trackData["useuri"].lower() == "yes" + bindex = bam_index + if useuri: + url = data else: - # Can happen in exotic condition - # e.g. if bam imported as symlink with datatype=unsorted.bam, then datatype changed to bam - # => no index generated by galaxy, but there might be one next to the symlink target - # this trick allows to skip the bam sorting made by galaxy if already done outside - if os.path.exists(os.path.realpath(data) + ".bai"): - self.symlink_or_copy(os.path.realpath(data) + ".bai", dest + ".bai") - else: - log.warn("Could not find a bam index (.bai file) for %s", data) + fname = "%s.bam" % trackData["label"] + dest = "%s/%s" % (self.outdir, fname) + url = fname + bindex = fname + '.bai' + self.subprocess_check_call(["cp", data, dest]) + if bam_index is not None and os.path.exists(bam_index): + if not os.path.exists(bindex): + # bai most probably made by galaxy and stored in galaxy dirs, need to copy it to dest + self.subprocess_check_call( + ["cp", bam_index, bindex] + ) + else: + # Can happen in exotic condition + # e.g. if bam imported as symlink with datatype=unsorted.bam, then datatype changed to bam + # => no index generated by galaxy, but there might be one next to the symlink target + # this trick allows to skip the bam sorting made by galaxy if already done outside + if os.path.exists(os.path.realpath(data) + ".bai"): + self.symlink_or_copy(os.path.realpath(data) + ".bai", bindex) + else: + log.warn("Could not find a bam index (.bai file) for %s", data) trackDict = { "type": "AlignmentsTrack", "trackId": tId, @@ -802,10 +846,10 @@ "assemblyNames": [self.genome_name], "adapter": { "type": "BamAdapter", - "bamLocation": bloc, + "bamLocation": {"uri": url}, "index": { "location": { - "uri": fname + ".bai", + "uri": bindex, } }, }, @@ -821,27 +865,36 @@ self.tracksToAdd.append(trackDict) self.trackIdlist.append(tId) - def add_cram(self, data, trackData, cramOpts, cram_index=None, **kwargs): + def add_cram(self, data, trackData, cram_index=None, **kwargs): tId = trackData["label"] - fname = "%s.cram" % trackData["label"] - dest = "%s/%s" % (self.outdir, fname) - url = fname - self.subprocess_check_call(["cp", data, dest]) - bloc = {"uri": url} - if cram_index is not None and os.path.exists(os.path.realpath(cram_index)): - # most probably made by galaxy and stored in galaxy dirs, need to copy it to dest - self.subprocess_check_call( - ["cp", os.path.realpath(cram_index), dest + ".crai"] - ) + useuri = trackData["useuri"].lower() == "yes" + bindex = cram_index + if useuri: + url = data else: - # Can happen in exotic condition - # e.g. if bam imported as symlink with datatype=unsorted.bam, then datatype changed to bam - # => no index generated by galaxy, but there might be one next to the symlink target - # this trick allows to skip the bam sorting made by galaxy if already done outside - if os.path.exists(os.path.realpath(data) + ".crai"): - self.symlink_or_copy(os.path.realpath(data) + ".crai", dest + ".crai") - else: - log.warn("Could not find a cram index (.crai file) for %s", data) + fname = "%s.cram" % trackData["label"] + dest = "%s/%s" % (self.outdir, fname) + bindex = fname + '.bai' + url = fname + self.subprocess_check_call(["cp", data, dest]) + + if bindex is not None and os.path.exists(bindex): + if not os.path.exists(dest+'.crai'): + # most probably made by galaxy and stored in galaxy dirs, need to copy it to dest + self.subprocess_check_call( + ["cp", os.path.realpath(cram_index), dest + ".crai"] + ) + else: + # Can happen in exotic condition + # e.g. if bam imported as symlink with datatype=unsorted.bam, then datatype changed to bam + # => no index generated by galaxy, but there might be one next to the symlink target + # this trick allows to skip the bam sorting made by galaxy if already done outside + if os.path.exists(os.path.realpath(data) + ".crai"): + self.symlink_or_copy( + os.path.realpath(data) + ".crai", dest + ".crai" + ) + else: + log.warn("Could not find a cram index (.crai file) for %s", data) trackDict = { "type": "AlignmentsTrack", "trackId": tId, @@ -849,9 +902,9 @@ "assemblyNames": [self.genome_name], "adapter": { "type": "CramAdapter", - "cramLocation": bloc, + "cramLocation": {"uri": url}, "craiLocation": { - "uri": fname + ".crai", + "uri": bindex, }, "sequenceAdapter": self.genome_sequence_adapter, }, @@ -873,12 +926,17 @@ # self.giURL, # trackData["metadata"]["dataset_id"], # ) - url = "%s.vcf.gz" % tId - dest = "%s/%s" % (self.outdir, url) - cmd = "bgzip -c %s > %s" % (data, dest) - self.subprocess_popen(cmd) - cmd = ["tabix", "-f", "-p", "vcf", dest] - self.subprocess_check_call(cmd) + + useuri = trackData["useuri"].lower() == "yes" + if useuri: + url = data + else: + url = "%s.vcf.gz" % tId + dest = "%s/%s" % (self.outdir, url) + cmd = "bgzip -c %s > %s" % (data, dest) + self.subprocess_popen(cmd) + cmd = ["tabix", "-f", "-p", "vcf", dest] + self.subprocess_check_call(cmd) trackDict = { "type": "VariantTrack", "trackId": tId, @@ -887,7 +945,7 @@ "adapter": { "type": "VcfTabixAdapter", "vcfGzLocation": { - "uri": url, + "uri": url }, "index": { "location": { @@ -917,13 +975,13 @@ def _sort_gff(self, data, dest): # Only index if not already done - if not os.path.exists(dest + ".gz"): - cmd = "jbrowse sort-gff '%s' | bgzip -c > '%s.gz'" % ( + if not os.path.exists(dest): + cmd = "jbrowse sort-gff '%s' | bgzip -c > '%s'" % ( data, dest, ) # "gff3sort.pl --precise '%s' | grep -v \"^$\" > '%s'" self.subprocess_popen(cmd) - self.subprocess_check_call(["tabix", "-f", "-p", "gff", dest + ".gz"]) + self.subprocess_check_call(["tabix", "-f", "-p", "gff", dest]) def _sort_bed(self, data, dest): # Only index if not already done @@ -934,10 +992,13 @@ self.subprocess_check_call(cmd) def add_gff(self, data, ext, trackData): - url = "%s.%s" % (trackData["label"], ext) - dest = "%s/%s" % (self.outdir, url) - self._sort_gff(data, dest) - url = url + ".gz" + useuri = trackData["useuri"].lower() == "yes" + if useuri: + url = trackData["path"] + else: + url = "%s.%s.gz" % (trackData["label"], ext) + dest = "%s/%s" % (self.outdir, url) + self._sort_gff(data, dest) tId = trackData["label"] trackDict = { "type": "FeatureTrack", @@ -972,11 +1033,14 @@ self.trackIdlist.append(tId) def add_bed(self, data, ext, trackData): - url = "%s.%s" % (trackData["label"], ext) - dest = "%s/%s.gz" % (self.outdir, url) - self._sort_bed(data, dest) tId = trackData["label"] - url = url + ".gz" + useuri = trackData["useuri"].lower() == "yes" + if useuri: + url = data + else: + url = "%s.%s.gz" % (trackData["label"], ext) + dest = "%s/%s" % (self.outdir, url) + self._sort_bed(data, dest) trackDict = { "type": "FeatureTrack", "trackId": tId, @@ -1068,19 +1132,22 @@ for i, ( dataset_path, dataset_ext, + useuri, track_human_label, extra_metadata, ) in enumerate(track["trackfiles"]): - # Unsanitize labels (element_identifiers are always sanitized by Galaxy) - for key, value in mapped_chars.items(): - track_human_label = track_human_label.replace(value, key) - track_human_label = track_human_label.replace(" ", "_") + if not dataset_path.strip().startswith("http"): + # Unsanitize labels (element_identifiers are always sanitized by Galaxy) + for key, value in mapped_chars.items(): + track_human_label = track_human_label.replace(value, key) + track_human_label = track_human_label.replace(" ", "_") outputTrackConfig = { "category": category, "style": {}, } outputTrackConfig["key"] = track_human_label + outputTrackConfig["useuri"] = useuri outputTrackConfig["trackset"] = track.get("trackset", {}) outputTrackConfig["label"] = "%s_%i_%s" % ( @@ -1139,25 +1206,17 @@ ) elif dataset_ext == "bam": real_indexes = track["conf"]["options"]["bam"]["bam_index"] - if not isinstance(real_indexes, list): - real_indexes = [real_indexes] - self.add_bam( dataset_path, outputTrackConfig, - track["conf"]["options"]["bam"], - bam_index=real_indexes[i], + bam_index=real_indexes, ) elif dataset_ext == "cram": - real_indexes = track["conf"]["options"]["cram"][ "cram_index"] - if not isinstance(real_indexes, list): - real_indexes = [real_indexes] - + real_indexes = track["conf"]["options"]["cram"]["cram_index"] self.add_cram( dataset_path, outputTrackConfig, - track["conf"]["options"]["cram"], - cram_index=real_indexes[i], + cram_index=real_indexes, ) elif dataset_ext == "blastxml": self.add_blastxml( @@ -1221,6 +1280,7 @@ "assemblyName": self.genome_name, "start": 0, "end": 100000, + "refName": "x", } if data.get("defaultLocation", ""): @@ -1307,9 +1367,9 @@ json.dump(self.config_json, config_file, indent=2) def clone_jbrowse(self): - """Clone a JBrowse directory into a destination directory. This also works in Biocontainer testing now """ + """Clone a JBrowse directory into a destination directory. This also works in Biocontainer testing now""" dest = self.outdir - #self.subprocess_check_call(['jbrowse', 'create', dest, '--tag', f"{JB_VER}"]) + # self.subprocess_check_call(['jbrowse', 'create', dest, '--tag', f"{JB_VER}"]) shutil.copytree(self.jbrowse2path, dest, dirs_exist_ok=True) for fn in [ "asset-manifest.json", @@ -1341,7 +1401,9 @@ if __name__ == "__main__": parser = argparse.ArgumentParser(description="", epilog="") parser.add_argument("--xml", help="Track Configuration") - parser.add_argument("--jbrowse2path", help="Path to JBrowse2 directory in biocontainer or Conda") + parser.add_argument( + "--jbrowse2path", help="Path to JBrowse2 directory in biocontainer or Conda" + ) parser.add_argument("--outdir", help="Output directory", default="out") parser.add_argument("--version", "-V", action="version", version="%(prog)s 2.0.1") args = parser.parse_args() @@ -1360,7 +1422,9 @@ jbrowse2path=args.jbrowse2path, genomes=[ { - "path": os.path.realpath(x.attrib["path"]), + "path": x.attrib["path"], + "label": x.attrib["label"], + "useuri": x.attrib["useuri"], "meta": metadata_from_node(x.find("metadata")), } for x in root.findall("metadata/genomes/genome") @@ -1395,10 +1459,12 @@ trackfiles = track.findall("files/trackFile") if trackfiles: for x in track.findall("files/trackFile"): + track_conf["useuri"] = x.attrib["useuri"] if is_multi_bigwig: multi_bigwig_paths.append( ( x.attrib["label"], + x.attrib["useuri"], os.path.realpath(x.attrib["path"]), ) ) @@ -1406,14 +1472,23 @@ if trackfiles: metadata = metadata_from_node(x.find("metadata")) track_conf["dataset_id"] = metadata["dataset_id"] - track_conf["trackfiles"].append( - ( - os.path.realpath(x.attrib["path"]), + if x.attrib["useuri"].lower() == "yes": + tfa = ( + x.attrib["path"], x.attrib["ext"], + x.attrib["useuri"], x.attrib["label"], metadata, ) - ) + else: + tfa = ( + os.path.realpath(x.attrib["path"]), + x.attrib["ext"], + x.attrib["useuri"], + x.attrib["label"], + metadata, + ) + track_conf["trackfiles"].append(tfa) if is_multi_bigwig: metadata = metadata_from_node(x.find("metadata")) @@ -1447,7 +1522,6 @@ except TypeError: track_conf["style"] = {} pass - track_conf["conf"] = etree_to_dict(track.find("options")) keys = jc.process_annotations(track_conf) if keys:
--- a/jbrowse2.xml Fri Mar 01 05:15:41 2024 +0000 +++ b/jbrowse2.xml Mon Mar 04 09:47:19 2024 +0000 @@ -1,4 +1,4 @@ - <tool id="jbrowse2" name="jbrowse2" version="@TOOL_VERSION@+@WRAPPER_VERSION@_5" profile="22.05"> + <tool id="jbrowse2" name="jbrowse2" version="@TOOL_VERSION@+@WRAPPER_VERSION@_6" profile="22.05"> <description>genome browser</description> <macros> <import>macros.xml</import> @@ -17,35 +17,75 @@ export JBROWSE2_PATH=\$(dirname \$(which jbrowse))/../opt/jbrowse2 && -## Once that's done, we run the python script to handle the real work -python '$__tool_directory__/jbrowse2.py' ---jbrowse2path \${JBROWSE2_PATH} ---outdir '$output.files_path' ---xml '$trackxml' && -#if $jbgen.zipOut == "true": - (cd '$output.files_path' && zip -r - . ) > '$output' -#else - cp '$output.files_path/index.html' '$output' -#end if -## Ugly testing hack since I cannot get <extra_files> to test the files I want to test. Hmph. -#if str($uglyTestingHack) == "enabled": - && cp '$trackxml' '$output' +#if $jbgen.ucol.formcoll=="collect": + python '$__tool_directory__/autogenJB2.py' + #for $key in $autoCollection.keys(): + #if $autoCollection[$key].is_collection: + #set subCol=$autoCollection[$key] + #set pafs=[($subCol[x],$subcol[x].ext,x) for x in $subCol.keys() if $subCol[x].ext == 'paf'] + #if len($pafs) > 0: + --pafmeta '$pafs[0]' + #set refs = [($pafs[0][2],$subCol[x],x) for x in $subCol.keys() if $subCol[x].ext == 'fasta'] + #for $ref in $refs: + --pafreferencemeta '$ref' + #end for + #end if + #else if $autoCollection[$key].ext == 'fasta': + --referencemeta '$autoCollection[$key],$autoCollection[$key].ext,$key' + #else if $autoCollection[$key].ext in ['bed', 'bigwig', 'cool', 'gff', 'gff3', 'hic', 'maf', 'mcool', 'scool', 'vcf'] + --trackmeta '$autoCollection[$key],$autoCollection[$key].ext,$key' + #else if $autoCollection[$key].ext in ['bam',] + --trackmeta '$autoCollection[$key],$autoCollection[$key].ext,$key,$autoCollection[$key].metadata.bam_index' + #else if $autoCollection[$key].ext in ['cram',] + --trackmeta '$autoCollection[$key],$autoCollection[$key].ext,$key,$autoCollection[$key].metadata.cram_index' + #end if + #end for + --outdir '$output.files_path' + --jbrowse2path \${JBROWSE2_PATH} + --sessName "Autogen JBrowse" && + #if $jbgen.zipOut == "true": + (cd '$output.files_path' && zip -r - . ) > '$output' + #else + cp '$output.files_path/index.html' '$output' + #end if +#else: + python '$__tool_directory__/jbrowse2.py' + --jbrowse2path \${JBROWSE2_PATH} + --outdir '$output.files_path' + --xml '$trackxml' && + #if $jbgen.zipOut == "true": + (cd '$output.files_path' && zip -r - . ) > '$output' + #else + cp '$output.files_path/index.html' '$output' + #end if + ## Ugly testing hack since I cannot get <extra_files> to test the files I want to test. Hmph. + #if str($uglyTestingHack) == "enabled": + && cp '$trackxml' '$output' + #end if #end if ]]></command> <configfiles> <configfile name="trackxml"><![CDATA[<?xml version="1.0"?> +#if $jbgen.ucol.formcoll=="form": <root> <metadata> <genomes> - #if str($reference_genome.genome_type_select) == "indexed": - <genome path="${reference_genome.genome.fields.path}" label="${reference_genome.genome.fields.name}"> + #if str($reference_genome.genome_type_select) == "uri": + <genome path="${reference_genome.uri}" label="${reference_genome.refname}" useuri="yes"> <metadata> <dataset - dname = "${reference_genome.genome.name}" /> + dname = "${reference_genome.refname}" /> + </metadata> + </genome> + #else if str($reference_genome.genome_type_select) == "indexed": + <genome path="${reference_genome.genome.fields.path}" label="${reference_genome.genome.fields.name}" useuri="no"> + <metadata> + <dataset + dname = "${reference_genome.genome.refname}" /> </metadata> </genome> #else - <genome path="$reference_genome.genome" label="${reference_genome.genome.name}"> + <genome path="$reference_genome.genome" label="${reference_genome.genome.name}" useuri="no"> <metadata> <dataset id="${__app__.security.encode_id($reference_genome.genome.id)}" hid="${reference_genome.genome.hid}" size="${reference_genome.genome.get_size(nice_size=True)}" @@ -98,13 +138,14 @@ <tracks> #for $tg in $track_groups: #for $track in $tg.data_tracks: - <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}"> - #if $track.data_format.data_format_select != "sparql": + #if $track.data_format.useuri.insource == "history": + #if $track.data_format.useuri.annotation: + <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}"> <files> - #for $dataset in $track.data_format.annotation: - #if $dataset: - <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.name}"> + #for $dataset in $track.data_format.useuri.annotation: + <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.name}" useuri="no"> <metadata> + <dataset id="${__app__.security.encode_id($dataset.id)}" hid="${dataset.hid}" size="${dataset.get_size(nice_size=True)}" edam_format="${dataset.datatype.edam_format}" @@ -119,6 +160,7 @@ user_id="-1" display_name="Unnamed History"/> #end if + <metadata #for (key, value) in $dataset.get_metadata().items(): #if "_types" not in $key and $value is not None and len(str($value)) < 5000: @@ -137,25 +179,20 @@ /> </metadata> </trackFile> - #end if - - #end for + #end for </files> - #else - <track cat="${tg.category}" format="sparql" visibility="off"> - #end if <options> #if str($track.data_format.data_format_select) == "bam": <bam> - #for $dataset in $track.data_format.annotation: + #for $dataset in $track.data_format.useuri.annotation: <bam_index>${dataset.metadata.bam_index}</bam_index> #end for </bam> #else if str($track.data_format.data_format_select) == "cram": <cram> - #for $dataset in $track.data_format.annotation: + #for $dataset in $track.data_format.useuri.annotation: <cram_index>${dataset.metadata.cram_index}</cram_index> #end for </cram> @@ -201,11 +238,25 @@ </sparql> #end if </options> + </track> + #end if + #else if track.data_format.useuri.annouri: + <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}"> + <files> + <trackFile path="${track.data_format.useuri.annouri}" ext="${track.data_format.data_format_select}" label="${track.data_format.useuri.annoname}" useuri="yes"> + <metadata> + <dataset id = "${track.data_format.useuri.annouri}" /> + </metadata> + </trackFile> + </files> + <options/> </track> - #end for - #end for + #end if + #end for + #end for </tracks> </root> +#end if ]]></configfile> </configfiles> @@ -214,6 +265,7 @@ <param help="Built-in references" label="Reference genome to display" name="genome_type_select" type="select"> <option selected="True" value="indexed">Use a built-in genome</option> <option value="history">Use a genome from history</option> + <option value="uri">URI for a reference in tabix .gz format </option> </param> <when value="indexed"> <param @@ -236,6 +288,18 @@ type="data"> </param> </when> + <when value="uri"> + <param + label="URI pointing to tabix compressed fasta" + name="uri" + type="text"> + </param> + <param + label="Reference key - dbkey equivalent" + name="refname" + type="text"> + </param> + </when> </conditional> <repeat name="track_groups" title="Track Group"> @@ -348,7 +412,7 @@ <param type="hidden" name="uglyTestingHack" value="" /> </inputs> <outputs> - <data format="html" name="output" label="JBrowse2 on $reference_genome.genome.name"> + <data format="html" name="output" label="JBrowse2"> <change_format> <when input="zipOut" value="true" format="zip" /> </change_format> @@ -363,7 +427,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="bigwig"/> - <param name="annotation" value="bw/merlin.bw"/> + <conditional name="useuri"> + <param name="annotation" value="bw/merlin.bw"/> + <param name="insource" value="history"/> + </conditional> </conditional> </repeat> </repeat> @@ -389,7 +456,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="vcf"/> - <param name="annotation" value="vcf/merlin.vcf"/> + <conditional name="useuri"> + <param name="insource" value="history"/> + <param name="annotation" value="vcf/merlin.vcf"/> + </conditional> </conditional> </repeat> </repeat> @@ -428,7 +498,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="bed/test-3.bed"/> + <conditional name="useuri"> + <param name="insource" value="history"/> + <param name="annotation" value="bed/test-3.bed"/> + </conditional> </conditional> </repeat> </repeat> @@ -453,7 +526,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/A.gff"/> + <conditional name="useuri"> + <param name="insource" value="history"/> + <param name="annotation" value="gff3/A.gff"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> @@ -474,7 +550,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> + <conditional name="useuri"> + <param name="insource" value="history"/> <param name="annotation" value="gff3/1.gff"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> @@ -496,7 +575,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/C.gff"/> + <conditional name="useuri"> + <param name="insource" value= "history"/> + <param name="annotation" value="gff3/C.gff"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> @@ -520,8 +602,11 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/B.gff"/> - <conditional name="match_part"> + <conditional name="useuri"> + <param name="annotation" value="gff3/B.gff"/> + <param name="insource" value= "history"/> + </conditional> + <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> <section name="jbcolor_scale"> @@ -545,7 +630,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/A.gff"/> + <conditional name="useuri"> + <param name="annotation" value="gff3/A.gff"/> + <param name="insource" value= "history"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> @@ -571,7 +659,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/1.gff"/> + <conditional name="useuri"> + <param name="annotation" value="gff3/1.gff"/> + <param name="insource" value= "history"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> @@ -602,7 +693,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/interpro.gff"/> + <conditional name="useuri"> + <param name="annotation" value="gff3/interpro.gff"/> + <param name="insource" value= "history"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> @@ -619,7 +713,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/2.gff"/> + <conditional name="useuri"> + <param name="annotation" value="gff3/2.gff"/> + <param name="insource" value= "history"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="true"/> <param name="name" value="cDNA_match"/> @@ -659,7 +756,10 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/1.gff"/> + <conditional name="useuri"> + <param name="annotation" value="gff3/1.gff"/> + <param name="insource" value= "history"/> + </conditional> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional> @@ -691,7 +791,11 @@ <repeat name="data_tracks"> <conditional name="data_format"> <param name="data_format_select" value="gene_calls"/> - <param name="annotation" value="gff3/1.gff"/> + <conditional name="useuri"> + <param name="annotation" value="gff3/1.gff"/> + <param name="insource" value= "history"/> + </conditional> + <param name="insource" value= "history"/> <conditional name="match_part"> <param name="match_part_select" value="false"/> </conditional>
--- a/macros.xml Fri Mar 01 05:15:41 2024 +0000 +++ b/macros.xml Mon Mar 04 09:47:19 2024 +0000 @@ -140,6 +140,19 @@ <xml name="general_options"> <section name="jbgen" title="General JBrowse Options [Advanced]" expanded="false"> + <conditional name="ucol"> + <param name="formcoll" type="select" label="Convert a collection of track files rather than filling in the tool form" + help="A collection of bam/vcf and other track types will be converted into a JBrowse2 automatically"> + <option value="form" selected="true">Fill in the tool form to specify tracks for the output JBrowse2</option> + <option value="collect">Convert a collection of suitable track files</option> + </param> + <when value="collect"> + <param label="Collection of bed, bam and other track files" name="autoCollection" type="data_collection" /> + </when> + <when value="form"> + </when> + </conditional> + <param label="Create a zip archive for downloading rather than viewing " name="zipOut" help="Default is to make an interactive browser appear when the 'eye' icon is activated" type="boolean" checked="false" truevalue="true" falsevalue="false" /> <param label="Subset to display to new users" type="text" name="defaultLocation" value="" help="Initial subset to be shown for users who have never visited the browser before. Example: 'ctgA:1234..5678'"/> @@ -505,8 +518,27 @@ </xml> <xml name="input_conditional" token_label="Track Data" token_format="data"> - <param label="@LABEL@" format="@FORMAT@" name="annotation" optional="True" type="data" multiple="True"/> - </xml> + <conditional name="useuri"> + <param name="insource" type="select" label="Define track data as a history file or an internet URI" + help="A public URI implies that all the associated tabix files are also in place. They are created for history files"> + <option value="history" selected="true">Track data from a history file</option> + <option value="uri" selected="true">Tabix data URI - index files must be available at corresponding URI</option> + </param> + <when value="history"> + <param label="@LABEL@" format="@FORMAT@" name="annotation" multiple="True" optional="true" type="data" /> + </when> + <when value="uri"> + <param label="@LABEL@" name="annouri" multiple="false" type="text" /> + <param label="Short name for track display" name="annoname" type="text" > + <sanitizer invalid_char="_"> + <valid initial="string.printable" > + <remove value="'" /> + </valid> + </sanitizer> + </param> + </when> + </conditional> + </xml> <xml name="citations"> <citations> <citation type="doi">10.1186/s13059-016-0924-1</citation>
--- a/readme.rst Fri Mar 01 05:15:41 2024 +0000 +++ b/readme.rst Mon Mar 04 09:47:19 2024 +0000 @@ -1,7 +1,19 @@ JBrowse2 in Galaxy ================== -Added Feb 3: cool/mcool -> hic +Added Mar 3: +- optional tracks at last for JB2 + - dotted noodles from optional inputs now ignored without harm +- autogenJB2. + - Takes a collection of bam/vcf etc and turns them into tracks in a normal JB2 history item. + - Uses the JbrowseConnector, but the XML tool drives it from the contents of the collection. + - Collection can be built from any source or with optional noodles in a WF + - Produces a JB2 with all available tracks. + - Argparse command line with repeats for tracks and references + - so works outside Galaxy to process directories or s3 buckets. + + +Added Feb 3: cool/mcool -> hic .. image:: dm4_in_jb2.png
--- a/test-data/gff3/merlin.gff3 Fri Mar 01 05:15:41 2024 +0000 +++ b/test-data/gff3/merlin.gff3 Mon Mar 04 09:47:19 2024 +0000 @@ -1,1230 +1,38 @@ ##gff-version 3 ##sequence-region Merlin 1 172788 -Merlin GeneMark.hmm gene 2 691 -856.563659 + . ID=Merlin_1;seqid=Merlin -Merlin GeneMark.hmm mRNA 2 691 . + . ID=Merlin_1_mRNA;Parent=Merlin_1;seqid=Merlin;color=#00ff00 -Merlin GeneMark.hmm exon 2 691 . + . ID=Merlin_1_exon;Parent=Merlin_1_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 2 691 . + 0 ID=Merlin_1_CDS;Parent=Merlin_1_exon;seqid=Merlin -Merlin GeneMark.hmm gene 752 1039 -339.046618 + . ID=Merlin_2;seqid=Merlin -Merlin GeneMark.hmm mRNA 752 1039 . + . ID=Merlin_2_mRNA;Parent=Merlin_2;seqid=Merlin -Merlin GeneMark.hmm exon 752 1039 . + . ID=Merlin_2_exon;Parent=Merlin_2_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 752 1039 . + 0 ID=Merlin_2_CDS;Parent=Merlin_2_exon;seqid=Merlin -Merlin GeneMark.hmm gene 1067 2011 -1229.683915 - . ID=Merlin_3;seqid=Merlin -Merlin GeneMark.hmm mRNA 1067 2011 . - . ID=Merlin_3_mRNA;Parent=Merlin_3;seqid=Merlin -Merlin GeneMark.hmm exon 1067 2011 . - . ID=Merlin_3_exon;Parent=Merlin_3_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 1067 2011 . - 0 ID=Merlin_3_CDS;Parent=Merlin_3_exon;seqid=Merlin -Merlin GeneMark.hmm gene 2011 3066 -1335.034872 - . ID=Merlin_4;seqid=Merlin -Merlin GeneMark.hmm mRNA 2011 3066 . - . ID=Merlin_4_mRNA;Parent=Merlin_4;seqid=Merlin -Merlin GeneMark.hmm exon 2011 3066 . - . ID=Merlin_4_exon;Parent=Merlin_4_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 2011 3066 . - 0 ID=Merlin_4_CDS;Parent=Merlin_4_exon;seqid=Merlin -Merlin GeneMark.hmm gene 3066 4796 -2177.374893 - . ID=Merlin_5;seqid=Merlin -Merlin GeneMark.hmm mRNA 3066 4796 . - . ID=Merlin_5_mRNA;Parent=Merlin_5;seqid=Merlin -Merlin GeneMark.hmm exon 3066 4796 . - . ID=Merlin_5_exon;Parent=Merlin_5_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 3066 4796 . - 0 ID=Merlin_5_CDS;Parent=Merlin_5_exon;seqid=Merlin -Merlin GeneMark.hmm gene 4793 5317 -682.565030 - . ID=Merlin_6;seqid=Merlin -Merlin GeneMark.hmm mRNA 4793 5317 . - . ID=Merlin_6_mRNA;Parent=Merlin_6;seqid=Merlin -Merlin GeneMark.hmm exon 4793 5317 . - . ID=Merlin_6_exon;Parent=Merlin_6_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 4793 5317 . - 0 ID=Merlin_6_CDS;Parent=Merlin_6_exon;seqid=Merlin -Merlin GeneMark.hmm gene 5289 6431 -1457.525863 - . ID=Merlin_7;seqid=Merlin -Merlin GeneMark.hmm mRNA 5289 6431 . - . ID=Merlin_7_mRNA;Parent=Merlin_7;seqid=Merlin -Merlin GeneMark.hmm exon 5289 6431 . - . ID=Merlin_7_exon;Parent=Merlin_7_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 5289 6431 . - 0 ID=Merlin_7_CDS;Parent=Merlin_7_exon;seqid=Merlin -Merlin GeneMark.hmm gene 6428 7180 -968.015933 - . ID=Merlin_8;seqid=Merlin -Merlin GeneMark.hmm mRNA 6428 7180 . - . ID=Merlin_8_mRNA;Parent=Merlin_8;seqid=Merlin -Merlin GeneMark.hmm exon 6428 7180 . - . ID=Merlin_8_exon;Parent=Merlin_8_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 6428 7180 . - 0 ID=Merlin_8_CDS;Parent=Merlin_8_exon;seqid=Merlin -Merlin GeneMark.hmm gene 7228 7857 -809.330137 + . ID=Merlin_9;seqid=Merlin -Merlin GeneMark.hmm mRNA 7228 7857 . + . ID=Merlin_9_mRNA;Parent=Merlin_9;seqid=Merlin -Merlin GeneMark.hmm exon 7228 7857 . + . ID=Merlin_9_exon;Parent=Merlin_9_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 7228 7857 . + 0 ID=Merlin_9_CDS;Parent=Merlin_9_exon;seqid=Merlin -Merlin GeneMark.hmm gene 7857 8252 -515.006678 + . ID=Merlin_10;seqid=Merlin -Merlin GeneMark.hmm mRNA 7857 8252 . + . ID=Merlin_10_mRNA;Parent=Merlin_10;seqid=Merlin -Merlin GeneMark.hmm exon 7857 8252 . + . ID=Merlin_10_exon;Parent=Merlin_10_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 7857 8252 . + 0 ID=Merlin_10_CDS;Parent=Merlin_10_exon;seqid=Merlin -Merlin GeneMark.hmm gene 8340 8753 -522.529341 + . ID=Merlin_11;seqid=Merlin -Merlin GeneMark.hmm mRNA 8340 8753 . + . ID=Merlin_11_mRNA;Parent=Merlin_11;seqid=Merlin -Merlin GeneMark.hmm exon 8340 8753 . + . ID=Merlin_11_exon;Parent=Merlin_11_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 8340 8753 . + 0 ID=Merlin_11_CDS;Parent=Merlin_11_exon;seqid=Merlin -Merlin GeneMark.hmm gene 8787 8951 -212.019038 + . ID=Merlin_12;seqid=Merlin -Merlin GeneMark.hmm mRNA 8787 8951 . + . ID=Merlin_12_mRNA;Parent=Merlin_12;seqid=Merlin -Merlin GeneMark.hmm exon 8787 8951 . + . ID=Merlin_12_exon;Parent=Merlin_12_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 8787 8951 . + 0 ID=Merlin_12_CDS;Parent=Merlin_12_exon;seqid=Merlin -Merlin GeneMark.hmm gene 9014 9241 -274.669850 - . ID=Merlin_13;seqid=Merlin -Merlin GeneMark.hmm mRNA 9014 9241 . - . ID=Merlin_13_mRNA;Parent=Merlin_13;seqid=Merlin -Merlin GeneMark.hmm exon 9014 9241 . - . ID=Merlin_13_exon;Parent=Merlin_13_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 9014 9241 . - 0 ID=Merlin_13_CDS;Parent=Merlin_13_exon;seqid=Merlin -Merlin GeneMark.hmm gene 9248 10747 -1911.373457 - . ID=Merlin_14;seqid=Merlin -Merlin GeneMark.hmm mRNA 9248 10747 . - . ID=Merlin_14_mRNA;Parent=Merlin_14;seqid=Merlin -Merlin GeneMark.hmm exon 9248 10747 . - . ID=Merlin_14_exon;Parent=Merlin_14_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 9248 10747 . - 0 ID=Merlin_14_CDS;Parent=Merlin_14_exon;seqid=Merlin -Merlin GeneMark.hmm gene 10800 11435 -778.108633 + . ID=Merlin_15;seqid=Merlin -Merlin GeneMark.hmm mRNA 10800 11435 . + . ID=Merlin_15_mRNA;Parent=Merlin_15;seqid=Merlin -Merlin GeneMark.hmm exon 10800 11435 . + . ID=Merlin_15_exon;Parent=Merlin_15_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 10800 11435 . + 0 ID=Merlin_15_CDS;Parent=Merlin_15_exon;seqid=Merlin -Merlin GeneMark.hmm gene 11469 12290 -1045.093825 + . ID=Merlin_16;seqid=Merlin -Merlin GeneMark.hmm mRNA 11469 12290 . + . ID=Merlin_16_mRNA;Parent=Merlin_16;seqid=Merlin -Merlin GeneMark.hmm exon 11469 12290 . + . ID=Merlin_16_exon;Parent=Merlin_16_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 11469 12290 . + 0 ID=Merlin_16_CDS;Parent=Merlin_16_exon;seqid=Merlin -Merlin GeneMark.hmm gene 12365 12601 -286.579590 + . ID=Merlin_17;seqid=Merlin -Merlin GeneMark.hmm mRNA 12365 12601 . + . ID=Merlin_17_mRNA;Parent=Merlin_17;seqid=Merlin -Merlin GeneMark.hmm exon 12365 12601 . + . ID=Merlin_17_exon;Parent=Merlin_17_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 12365 12601 . + 0 ID=Merlin_17_CDS;Parent=Merlin_17_exon;seqid=Merlin -Merlin GeneMark.hmm gene 12598 12951 -440.013978 + . ID=Merlin_18;seqid=Merlin -Merlin GeneMark.hmm mRNA 12598 12951 . + . ID=Merlin_18_mRNA;Parent=Merlin_18;seqid=Merlin -Merlin GeneMark.hmm exon 12598 12951 . + . ID=Merlin_18_exon;Parent=Merlin_18_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 12598 12951 . + 0 ID=Merlin_18_CDS;Parent=Merlin_18_exon;seqid=Merlin -Merlin GeneMark.hmm gene 13067 13330 -321.884922 + . ID=Merlin_19;seqid=Merlin -Merlin GeneMark.hmm mRNA 13067 13330 . + . ID=Merlin_19_mRNA;Parent=Merlin_19;seqid=Merlin -Merlin GeneMark.hmm exon 13067 13330 . + . ID=Merlin_19_exon;Parent=Merlin_19_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 13067 13330 . + 0 ID=Merlin_19_CDS;Parent=Merlin_19_exon;seqid=Merlin -Merlin GeneMark.hmm gene 13340 14341 -1253.644245 + . ID=Merlin_20;seqid=Merlin -Merlin GeneMark.hmm mRNA 13340 14341 . + . ID=Merlin_20_mRNA;Parent=Merlin_20;seqid=Merlin -Merlin GeneMark.hmm exon 13340 14341 . + . ID=Merlin_20_exon;Parent=Merlin_20_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 13340 14341 . + 0 ID=Merlin_20_CDS;Parent=Merlin_20_exon;seqid=Merlin -Merlin GeneMark.hmm gene 14320 14883 -740.935174 + . ID=Merlin_21;seqid=Merlin -Merlin GeneMark.hmm mRNA 14320 14883 . + . ID=Merlin_21_mRNA;Parent=Merlin_21;seqid=Merlin -Merlin GeneMark.hmm exon 14320 14883 . + . ID=Merlin_21_exon;Parent=Merlin_21_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 14320 14883 . + 0 ID=Merlin_21_CDS;Parent=Merlin_21_exon;seqid=Merlin -Merlin GeneMark.hmm gene 14911 16197 -1617.100759 - . ID=Merlin_22;seqid=Merlin -Merlin GeneMark.hmm mRNA 14911 16197 . - . ID=Merlin_22_mRNA;Parent=Merlin_22;seqid=Merlin -Merlin GeneMark.hmm exon 14911 16197 . - . ID=Merlin_22_exon;Parent=Merlin_22_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 14911 16197 . - 0 ID=Merlin_22_CDS;Parent=Merlin_22_exon;seqid=Merlin -Merlin GeneMark.hmm gene 16289 17836 -1947.052483 - . ID=Merlin_23;seqid=Merlin -Merlin GeneMark.hmm mRNA 16289 17836 . - . ID=Merlin_23_mRNA;Parent=Merlin_23;seqid=Merlin -Merlin GeneMark.hmm exon 16289 17836 . - . ID=Merlin_23_exon;Parent=Merlin_23_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 16289 17836 . - 0 ID=Merlin_23_CDS;Parent=Merlin_23_exon;seqid=Merlin -Merlin GeneMark.hmm gene 17858 18673 -991.849469 - . ID=Merlin_24;seqid=Merlin -Merlin GeneMark.hmm mRNA 17858 18673 . - . ID=Merlin_24_mRNA;Parent=Merlin_24;seqid=Merlin -Merlin GeneMark.hmm exon 17858 18673 . - . ID=Merlin_24_exon;Parent=Merlin_24_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 17858 18673 . - 0 ID=Merlin_24_CDS;Parent=Merlin_24_exon;seqid=Merlin -Merlin GeneMark.hmm gene 18707 19351 -821.724123 - . ID=Merlin_25;seqid=Merlin -Merlin GeneMark.hmm mRNA 18707 19351 . - . ID=Merlin_25_mRNA;Parent=Merlin_25;seqid=Merlin -Merlin GeneMark.hmm exon 18707 19351 . - . ID=Merlin_25_exon;Parent=Merlin_25_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 18707 19351 . - 0 ID=Merlin_25_CDS;Parent=Merlin_25_exon;seqid=Merlin -Merlin GeneMark.hmm gene 19351 19776 -538.184958 - . ID=Merlin_26;seqid=Merlin -Merlin GeneMark.hmm mRNA 19351 19776 . - . ID=Merlin_26_mRNA;Parent=Merlin_26;seqid=Merlin -Merlin GeneMark.hmm exon 19351 19776 . - . ID=Merlin_26_exon;Parent=Merlin_26_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 19351 19776 . - 0 ID=Merlin_26_CDS;Parent=Merlin_26_exon;seqid=Merlin -Merlin GeneMark.hmm gene 19776 19988 -255.987740 - . ID=Merlin_27;seqid=Merlin -Merlin GeneMark.hmm mRNA 19776 19988 . - . ID=Merlin_27_mRNA;Parent=Merlin_27;seqid=Merlin -Merlin GeneMark.hmm exon 19776 19988 . - . ID=Merlin_27_exon;Parent=Merlin_27_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 19776 19988 . - 0 ID=Merlin_27_CDS;Parent=Merlin_27_exon;seqid=Merlin -Merlin GeneMark.hmm gene 19988 21550 -1974.103338 - . ID=Merlin_28;seqid=Merlin -Merlin GeneMark.hmm mRNA 19988 21550 . - . ID=Merlin_28_mRNA;Parent=Merlin_28;seqid=Merlin -Merlin GeneMark.hmm exon 19988 21550 . - . ID=Merlin_28_exon;Parent=Merlin_28_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 19988 21550 . - 0 ID=Merlin_28_CDS;Parent=Merlin_28_exon;seqid=Merlin -Merlin GeneMark.hmm gene 21625 22116 -616.669463 - . ID=Merlin_29;seqid=Merlin -Merlin GeneMark.hmm mRNA 21625 22116 . - . ID=Merlin_29_mRNA;Parent=Merlin_29;seqid=Merlin -Merlin GeneMark.hmm exon 21625 22116 . - . ID=Merlin_29_exon;Parent=Merlin_29_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 21625 22116 . - 0 ID=Merlin_29_CDS;Parent=Merlin_29_exon;seqid=Merlin -Merlin GeneMark.hmm gene 22240 24216 -2488.948058 - . ID=Merlin_30;seqid=Merlin -Merlin GeneMark.hmm mRNA 22240 24216 . - . ID=Merlin_30_mRNA;Parent=Merlin_30;seqid=Merlin -Merlin GeneMark.hmm exon 22240 24216 . - . ID=Merlin_30_exon;Parent=Merlin_30_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 22240 24216 . - 0 ID=Merlin_30_CDS;Parent=Merlin_30_exon;seqid=Merlin -Merlin GeneMark.hmm gene 24250 26094 -2334.323049 - . ID=Merlin_31;seqid=Merlin -Merlin GeneMark.hmm mRNA 24250 26094 . - . ID=Merlin_31_mRNA;Parent=Merlin_31;seqid=Merlin -Merlin GeneMark.hmm exon 24250 26094 . - . ID=Merlin_31_exon;Parent=Merlin_31_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 24250 26094 . - 0 ID=Merlin_31_CDS;Parent=Merlin_31_exon;seqid=Merlin -Merlin GeneMark.hmm gene 26072 26569 -622.542092 - . ID=Merlin_32;seqid=Merlin -Merlin GeneMark.hmm mRNA 26072 26569 . - . ID=Merlin_32_mRNA;Parent=Merlin_32;seqid=Merlin -Merlin GeneMark.hmm exon 26072 26569 . - . ID=Merlin_32_exon;Parent=Merlin_32_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 26072 26569 . - 0 ID=Merlin_32_CDS;Parent=Merlin_32_exon;seqid=Merlin -Merlin GeneMark.hmm gene 26572 27390 -1062.517306 - . ID=Merlin_33;seqid=Merlin -Merlin GeneMark.hmm mRNA 26572 27390 . - . ID=Merlin_33_mRNA;Parent=Merlin_33;seqid=Merlin -Merlin GeneMark.hmm exon 26572 27390 . - . ID=Merlin_33_exon;Parent=Merlin_33_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 26572 27390 . - 0 ID=Merlin_33_CDS;Parent=Merlin_33_exon;seqid=Merlin -Merlin GeneMark.hmm gene 27434 28204 -971.349898 - . ID=Merlin_34;seqid=Merlin -Merlin GeneMark.hmm mRNA 27434 28204 . - . ID=Merlin_34_mRNA;Parent=Merlin_34;seqid=Merlin -Merlin GeneMark.hmm exon 27434 28204 . - . ID=Merlin_34_exon;Parent=Merlin_34_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 27434 28204 . - 0 ID=Merlin_34_CDS;Parent=Merlin_34_exon;seqid=Merlin -Merlin GeneMark.hmm gene 28201 29130 -1172.195550 - . ID=Merlin_35;seqid=Merlin -Merlin GeneMark.hmm mRNA 28201 29130 . - . ID=Merlin_35_mRNA;Parent=Merlin_35;seqid=Merlin -Merlin GeneMark.hmm exon 28201 29130 . - . ID=Merlin_35_exon;Parent=Merlin_35_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 28201 29130 . - 0 ID=Merlin_35_CDS;Parent=Merlin_35_exon;seqid=Merlin -Merlin GeneMark.hmm gene 29162 30553 -1754.882559 - . ID=Merlin_36;seqid=Merlin -Merlin GeneMark.hmm mRNA 29162 30553 . - . ID=Merlin_36_mRNA;Parent=Merlin_36;seqid=Merlin -Merlin GeneMark.hmm exon 29162 30553 . - . ID=Merlin_36_exon;Parent=Merlin_36_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 29162 30553 . - 0 ID=Merlin_36_CDS;Parent=Merlin_36_exon;seqid=Merlin -Merlin GeneMark.hmm gene 30564 31982 -1840.409176 - . ID=Merlin_37;seqid=Merlin -Merlin GeneMark.hmm mRNA 30564 31982 . - . ID=Merlin_37_mRNA;Parent=Merlin_37;seqid=Merlin -Merlin GeneMark.hmm exon 30564 31982 . - . ID=Merlin_37_exon;Parent=Merlin_37_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 30564 31982 . - 0 ID=Merlin_37_CDS;Parent=Merlin_37_exon;seqid=Merlin -Merlin GeneMark.hmm gene 31982 32632 -810.715921 - . ID=Merlin_38;seqid=Merlin -Merlin GeneMark.hmm mRNA 31982 32632 . - . ID=Merlin_38_mRNA;Parent=Merlin_38;seqid=Merlin -Merlin GeneMark.hmm exon 31982 32632 . - . ID=Merlin_38_exon;Parent=Merlin_38_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 31982 32632 . - 0 ID=Merlin_38_CDS;Parent=Merlin_38_exon;seqid=Merlin -Merlin GeneMark.hmm gene 32632 34437 -2286.512966 - . ID=Merlin_39;seqid=Merlin -Merlin GeneMark.hmm mRNA 32632 34437 . - . ID=Merlin_39_mRNA;Parent=Merlin_39;seqid=Merlin -Merlin GeneMark.hmm exon 32632 34437 . - . ID=Merlin_39_exon;Parent=Merlin_39_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 32632 34437 . - 0 ID=Merlin_39_CDS;Parent=Merlin_39_exon;seqid=Merlin -Merlin GeneMark.hmm gene 34434 35300 -1103.339440 - . ID=Merlin_40;seqid=Merlin -Merlin GeneMark.hmm mRNA 34434 35300 . - . ID=Merlin_40_mRNA;Parent=Merlin_40;seqid=Merlin -Merlin GeneMark.hmm exon 34434 35300 . - . ID=Merlin_40_exon;Parent=Merlin_40_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 34434 35300 . - 0 ID=Merlin_40_CDS;Parent=Merlin_40_exon;seqid=Merlin -Merlin GeneMark.hmm gene 35372 36385 -1286.607331 - . ID=Merlin_41;seqid=Merlin -Merlin GeneMark.hmm mRNA 35372 36385 . - . ID=Merlin_41_mRNA;Parent=Merlin_41;seqid=Merlin -Merlin GeneMark.hmm exon 35372 36385 . - . ID=Merlin_41_exon;Parent=Merlin_41_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 35372 36385 . - 0 ID=Merlin_41_CDS;Parent=Merlin_41_exon;seqid=Merlin -Merlin GeneMark.hmm gene 36378 39479 -3926.862479 - . ID=Merlin_42;seqid=Merlin -Merlin GeneMark.hmm mRNA 36378 39479 . - . ID=Merlin_42_mRNA;Parent=Merlin_42;seqid=Merlin -Merlin GeneMark.hmm exon 36378 39479 . - . ID=Merlin_42_exon;Parent=Merlin_42_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 36378 39479 . - 0 ID=Merlin_42_CDS;Parent=Merlin_42_exon;seqid=Merlin -Merlin GeneMark.hmm gene 39476 41416 -2421.657174 - . ID=Merlin_43;seqid=Merlin -Merlin GeneMark.hmm mRNA 39476 41416 . - . ID=Merlin_43_mRNA;Parent=Merlin_43;seqid=Merlin -Merlin GeneMark.hmm exon 39476 41416 . - . ID=Merlin_43_exon;Parent=Merlin_43_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 39476 41416 . - 0 ID=Merlin_43_CDS;Parent=Merlin_43_exon;seqid=Merlin -Merlin GeneMark.hmm gene 41416 41709 -381.858612 - . ID=Merlin_44;seqid=Merlin -Merlin GeneMark.hmm mRNA 41416 41709 . - . ID=Merlin_44_mRNA;Parent=Merlin_44;seqid=Merlin -Merlin GeneMark.hmm exon 41416 41709 . - . ID=Merlin_44_exon;Parent=Merlin_44_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 41416 41709 . - 0 ID=Merlin_44_CDS;Parent=Merlin_44_exon;seqid=Merlin -Merlin GeneMark.hmm gene 41709 42224 -673.160274 - . ID=Merlin_45;seqid=Merlin -Merlin GeneMark.hmm mRNA 41709 42224 . - . ID=Merlin_45_mRNA;Parent=Merlin_45;seqid=Merlin -Merlin GeneMark.hmm exon 41709 42224 . - . ID=Merlin_45_exon;Parent=Merlin_45_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 41709 42224 . - 0 ID=Merlin_45_CDS;Parent=Merlin_45_exon;seqid=Merlin -Merlin GeneMark.hmm gene 42224 43951 -2203.710381 - . ID=Merlin_46;seqid=Merlin -Merlin GeneMark.hmm mRNA 42224 43951 . - . ID=Merlin_46_mRNA;Parent=Merlin_46;seqid=Merlin -Merlin GeneMark.hmm exon 42224 43951 . - . ID=Merlin_46_exon;Parent=Merlin_46_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 42224 43951 . - 0 ID=Merlin_46_CDS;Parent=Merlin_46_exon;seqid=Merlin -Merlin GeneMark.hmm gene 43951 44526 -730.479121 - . ID=Merlin_47;seqid=Merlin -Merlin GeneMark.hmm mRNA 43951 44526 . - . ID=Merlin_47_mRNA;Parent=Merlin_47;seqid=Merlin -Merlin GeneMark.hmm exon 43951 44526 . - . ID=Merlin_47_exon;Parent=Merlin_47_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 43951 44526 . - 0 ID=Merlin_47_CDS;Parent=Merlin_47_exon;seqid=Merlin -Merlin GeneMark.hmm gene 44576 45025 -562.019925 + . ID=Merlin_48;seqid=Merlin -Merlin GeneMark.hmm mRNA 44576 45025 . + . ID=Merlin_48_mRNA;Parent=Merlin_48;seqid=Merlin -Merlin GeneMark.hmm exon 44576 45025 . + . ID=Merlin_48_exon;Parent=Merlin_48_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 44576 45025 . + 0 ID=Merlin_48_CDS;Parent=Merlin_48_exon;seqid=Merlin -Merlin GeneMark.hmm gene 45025 45855 -1066.702009 + . ID=Merlin_49;seqid=Merlin -Merlin GeneMark.hmm mRNA 45025 45855 . + . ID=Merlin_49_mRNA;Parent=Merlin_49;seqid=Merlin -Merlin GeneMark.hmm exon 45025 45855 . + . ID=Merlin_49_exon;Parent=Merlin_49_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 45025 45855 . + 0 ID=Merlin_49_CDS;Parent=Merlin_49_exon;seqid=Merlin -Merlin GeneMark.hmm gene 45940 46527 -776.360306 + . ID=Merlin_50;seqid=Merlin -Merlin GeneMark.hmm mRNA 45940 46527 . + . ID=Merlin_50_mRNA;Parent=Merlin_50;seqid=Merlin -Merlin GeneMark.hmm exon 45940 46527 . + . ID=Merlin_50_exon;Parent=Merlin_50_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 45940 46527 . + 0 ID=Merlin_50_CDS;Parent=Merlin_50_exon;seqid=Merlin -Merlin GeneMark.hmm gene 46527 47255 -921.088284 + . ID=Merlin_51;seqid=Merlin -Merlin GeneMark.hmm mRNA 46527 47255 . + . ID=Merlin_51_mRNA;Parent=Merlin_51;seqid=Merlin -Merlin GeneMark.hmm exon 46527 47255 . + . ID=Merlin_51_exon;Parent=Merlin_51_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 46527 47255 . + 0 ID=Merlin_51_CDS;Parent=Merlin_51_exon;seqid=Merlin -Merlin GeneMark.hmm gene 47252 47485 -286.785634 + . ID=Merlin_52;seqid=Merlin -Merlin GeneMark.hmm mRNA 47252 47485 . + . ID=Merlin_52_mRNA;Parent=Merlin_52;seqid=Merlin -Merlin GeneMark.hmm exon 47252 47485 . + . ID=Merlin_52_exon;Parent=Merlin_52_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 47252 47485 . + 0 ID=Merlin_52_CDS;Parent=Merlin_52_exon;seqid=Merlin -Merlin GeneMark.hmm gene 47485 47940 -595.997014 + . ID=Merlin_53;seqid=Merlin -Merlin GeneMark.hmm mRNA 47485 47940 . + . ID=Merlin_53_mRNA;Parent=Merlin_53;seqid=Merlin -Merlin GeneMark.hmm exon 47485 47940 . + . ID=Merlin_53_exon;Parent=Merlin_53_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 47485 47940 . + 0 ID=Merlin_53_CDS;Parent=Merlin_53_exon;seqid=Merlin -Merlin GeneMark.hmm gene 47937 48143 -259.350499 + . ID=Merlin_54;seqid=Merlin -Merlin GeneMark.hmm mRNA 47937 48143 . + . ID=Merlin_54_mRNA;Parent=Merlin_54;seqid=Merlin -Merlin GeneMark.hmm exon 47937 48143 . + . ID=Merlin_54_exon;Parent=Merlin_54_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 47937 48143 . + 0 ID=Merlin_54_CDS;Parent=Merlin_54_exon;seqid=Merlin -Merlin GeneMark.hmm gene 48140 48358 -277.240023 + . ID=Merlin_55;seqid=Merlin -Merlin GeneMark.hmm mRNA 48140 48358 . + . ID=Merlin_55_mRNA;Parent=Merlin_55;seqid=Merlin -Merlin GeneMark.hmm exon 48140 48358 . + . ID=Merlin_55_exon;Parent=Merlin_55_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 48140 48358 . + 0 ID=Merlin_55_CDS;Parent=Merlin_55_exon;seqid=Merlin -Merlin GeneMark.hmm gene 48418 48600 -230.583168 + . ID=Merlin_56;seqid=Merlin -Merlin GeneMark.hmm mRNA 48418 48600 . + . ID=Merlin_56_mRNA;Parent=Merlin_56;seqid=Merlin -Merlin GeneMark.hmm exon 48418 48600 . + . ID=Merlin_56_exon;Parent=Merlin_56_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 48418 48600 . + 0 ID=Merlin_56_CDS;Parent=Merlin_56_exon;seqid=Merlin -Merlin GeneMark.hmm gene 48584 48769 -232.687067 + . ID=Merlin_57;seqid=Merlin -Merlin GeneMark.hmm mRNA 48584 48769 . + . ID=Merlin_57_mRNA;Parent=Merlin_57;seqid=Merlin -Merlin GeneMark.hmm exon 48584 48769 . + . ID=Merlin_57_exon;Parent=Merlin_57_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 48584 48769 . + 0 ID=Merlin_57_CDS;Parent=Merlin_57_exon;seqid=Merlin -Merlin GeneMark.hmm gene 48826 49053 -288.143395 + . ID=Merlin_58;seqid=Merlin -Merlin GeneMark.hmm mRNA 48826 49053 . + . ID=Merlin_58_mRNA;Parent=Merlin_58;seqid=Merlin -Merlin GeneMark.hmm exon 48826 49053 . + . ID=Merlin_58_exon;Parent=Merlin_58_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 48826 49053 . + 0 ID=Merlin_58_CDS;Parent=Merlin_58_exon;seqid=Merlin -Merlin GeneMark.hmm gene 49076 49432 -449.304895 + . ID=Merlin_59;seqid=Merlin -Merlin GeneMark.hmm mRNA 49076 49432 . + . ID=Merlin_59_mRNA;Parent=Merlin_59;seqid=Merlin -Merlin GeneMark.hmm exon 49076 49432 . + . ID=Merlin_59_exon;Parent=Merlin_59_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 49076 49432 . + 0 ID=Merlin_59_CDS;Parent=Merlin_59_exon;seqid=Merlin -Merlin GeneMark.hmm gene 49844 50110 -322.091381 + . ID=Merlin_60;seqid=Merlin -Merlin GeneMark.hmm mRNA 49844 50110 . + . ID=Merlin_60_mRNA;Parent=Merlin_60;seqid=Merlin -Merlin GeneMark.hmm exon 49844 50110 . + . ID=Merlin_60_exon;Parent=Merlin_60_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 49844 50110 . + 0 ID=Merlin_60_CDS;Parent=Merlin_60_exon;seqid=Merlin -Merlin GeneMark.hmm gene 50983 51234 -301.882768 + . ID=Merlin_61;seqid=Merlin -Merlin GeneMark.hmm mRNA 50983 51234 . + . ID=Merlin_61_mRNA;Parent=Merlin_61;seqid=Merlin -Merlin GeneMark.hmm exon 50983 51234 . + . ID=Merlin_61_exon;Parent=Merlin_61_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 50983 51234 . + 0 ID=Merlin_61_CDS;Parent=Merlin_61_exon;seqid=Merlin -Merlin GeneMark.hmm gene 51596 51838 -304.801536 + . ID=Merlin_62;seqid=Merlin -Merlin GeneMark.hmm mRNA 51596 51838 . + . ID=Merlin_62_mRNA;Parent=Merlin_62;seqid=Merlin -Merlin GeneMark.hmm exon 51596 51838 . + . ID=Merlin_62_exon;Parent=Merlin_62_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 51596 51838 . + 0 ID=Merlin_62_CDS;Parent=Merlin_62_exon;seqid=Merlin -Merlin GeneMark.hmm gene 51835 52182 -434.777109 + . ID=Merlin_63;seqid=Merlin -Merlin GeneMark.hmm mRNA 51835 52182 . + . ID=Merlin_63_mRNA;Parent=Merlin_63;seqid=Merlin -Merlin GeneMark.hmm exon 51835 52182 . + . ID=Merlin_63_exon;Parent=Merlin_63_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 51835 52182 . + 0 ID=Merlin_63_CDS;Parent=Merlin_63_exon;seqid=Merlin -Merlin GeneMark.hmm gene 52175 52684 -629.023983 + . ID=Merlin_64;seqid=Merlin -Merlin GeneMark.hmm mRNA 52175 52684 . + . ID=Merlin_64_mRNA;Parent=Merlin_64;seqid=Merlin -Merlin GeneMark.hmm exon 52175 52684 . + . ID=Merlin_64_exon;Parent=Merlin_64_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 52175 52684 . + 0 ID=Merlin_64_CDS;Parent=Merlin_64_exon;seqid=Merlin -Merlin GeneMark.hmm gene 52681 52827 -183.076828 + . ID=Merlin_65;seqid=Merlin -Merlin GeneMark.hmm mRNA 52681 52827 . + . ID=Merlin_65_mRNA;Parent=Merlin_65;seqid=Merlin -Merlin GeneMark.hmm exon 52681 52827 . + . ID=Merlin_65_exon;Parent=Merlin_65_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 52681 52827 . + 0 ID=Merlin_65_CDS;Parent=Merlin_65_exon;seqid=Merlin -Merlin GeneMark.hmm gene 52806 53030 -287.687980 + . ID=Merlin_66;seqid=Merlin -Merlin GeneMark.hmm mRNA 52806 53030 . + . ID=Merlin_66_mRNA;Parent=Merlin_66;seqid=Merlin -Merlin GeneMark.hmm exon 52806 53030 . + . ID=Merlin_66_exon;Parent=Merlin_66_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 52806 53030 . + 0 ID=Merlin_66_CDS;Parent=Merlin_66_exon;seqid=Merlin -Merlin GeneMark.hmm gene 53032 53475 -570.370348 + . ID=Merlin_67;seqid=Merlin -Merlin GeneMark.hmm mRNA 53032 53475 . + . ID=Merlin_67_mRNA;Parent=Merlin_67;seqid=Merlin -Merlin GeneMark.hmm exon 53032 53475 . + . ID=Merlin_67_exon;Parent=Merlin_67_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 53032 53475 . + 0 ID=Merlin_67_CDS;Parent=Merlin_67_exon;seqid=Merlin -Merlin GeneMark.hmm gene 53647 54225 -757.038069 + . ID=Merlin_68;seqid=Merlin -Merlin GeneMark.hmm mRNA 53647 54225 . + . ID=Merlin_68_mRNA;Parent=Merlin_68;seqid=Merlin -Merlin GeneMark.hmm exon 53647 54225 . + . ID=Merlin_68_exon;Parent=Merlin_68_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 53647 54225 . + 0 ID=Merlin_68_CDS;Parent=Merlin_68_exon;seqid=Merlin -Merlin GeneMark.hmm gene 54316 54516 -236.842212 + . ID=Merlin_69;seqid=Merlin -Merlin GeneMark.hmm mRNA 54316 54516 . + . ID=Merlin_69_mRNA;Parent=Merlin_69;seqid=Merlin -Merlin GeneMark.hmm exon 54316 54516 . + . ID=Merlin_69_exon;Parent=Merlin_69_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 54316 54516 . + 0 ID=Merlin_69_CDS;Parent=Merlin_69_exon;seqid=Merlin -Merlin GeneMark.hmm gene 54569 55168 -748.986136 + . ID=Merlin_70;seqid=Merlin -Merlin GeneMark.hmm mRNA 54569 55168 . + . ID=Merlin_70_mRNA;Parent=Merlin_70;seqid=Merlin -Merlin GeneMark.hmm exon 54569 55168 . + . ID=Merlin_70_exon;Parent=Merlin_70_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 54569 55168 . + 0 ID=Merlin_70_CDS;Parent=Merlin_70_exon;seqid=Merlin -Merlin GeneMark.hmm gene 55216 55860 -813.197162 + . ID=Merlin_71;seqid=Merlin -Merlin GeneMark.hmm mRNA 55216 55860 . + . ID=Merlin_71_mRNA;Parent=Merlin_71;seqid=Merlin -Merlin GeneMark.hmm exon 55216 55860 . + . ID=Merlin_71_exon;Parent=Merlin_71_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 55216 55860 . + 0 ID=Merlin_71_CDS;Parent=Merlin_71_exon;seqid=Merlin -Merlin GeneMark.hmm gene 55857 56279 -536.845669 + . ID=Merlin_72;seqid=Merlin -Merlin GeneMark.hmm mRNA 55857 56279 . + . ID=Merlin_72_mRNA;Parent=Merlin_72;seqid=Merlin -Merlin GeneMark.hmm exon 55857 56279 . + . ID=Merlin_72_exon;Parent=Merlin_72_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 55857 56279 . + 0 ID=Merlin_72_CDS;Parent=Merlin_72_exon;seqid=Merlin -Merlin GeneMark.hmm gene 56276 56644 -463.468418 + . ID=Merlin_73;seqid=Merlin -Merlin GeneMark.hmm mRNA 56276 56644 . + . ID=Merlin_73_mRNA;Parent=Merlin_73;seqid=Merlin -Merlin GeneMark.hmm exon 56276 56644 . + . ID=Merlin_73_exon;Parent=Merlin_73_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 56276 56644 . + 0 ID=Merlin_73_CDS;Parent=Merlin_73_exon;seqid=Merlin -Merlin GeneMark.hmm gene 56634 56894 -313.595651 + . ID=Merlin_74;seqid=Merlin -Merlin GeneMark.hmm mRNA 56634 56894 . + . ID=Merlin_74_mRNA;Parent=Merlin_74;seqid=Merlin -Merlin GeneMark.hmm exon 56634 56894 . + . ID=Merlin_74_exon;Parent=Merlin_74_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 56634 56894 . + 0 ID=Merlin_74_CDS;Parent=Merlin_74_exon;seqid=Merlin -Merlin GeneMark.hmm gene 56894 57172 -343.261028 + . ID=Merlin_75;seqid=Merlin -Merlin GeneMark.hmm mRNA 56894 57172 . + . ID=Merlin_75_mRNA;Parent=Merlin_75;seqid=Merlin -Merlin GeneMark.hmm exon 56894 57172 . + . ID=Merlin_75_exon;Parent=Merlin_75_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 56894 57172 . + 0 ID=Merlin_75_CDS;Parent=Merlin_75_exon;seqid=Merlin -Merlin GeneMark.hmm gene 57182 57403 -269.950515 + . ID=Merlin_76;seqid=Merlin -Merlin GeneMark.hmm mRNA 57182 57403 . + . ID=Merlin_76_mRNA;Parent=Merlin_76;seqid=Merlin -Merlin GeneMark.hmm exon 57182 57403 . + . ID=Merlin_76_exon;Parent=Merlin_76_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 57182 57403 . + 0 ID=Merlin_76_CDS;Parent=Merlin_76_exon;seqid=Merlin -Merlin GeneMark.hmm gene 57499 57786 -373.177871 + . ID=Merlin_77;seqid=Merlin -Merlin GeneMark.hmm mRNA 57499 57786 . + . ID=Merlin_77_mRNA;Parent=Merlin_77;seqid=Merlin -Merlin GeneMark.hmm exon 57499 57786 . + . ID=Merlin_77_exon;Parent=Merlin_77_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 57499 57786 . + 0 ID=Merlin_77_CDS;Parent=Merlin_77_exon;seqid=Merlin -Merlin GeneMark.hmm gene 57777 58724 -1215.940307 + . ID=Merlin_78;seqid=Merlin -Merlin GeneMark.hmm mRNA 57777 58724 . + . ID=Merlin_78_mRNA;Parent=Merlin_78;seqid=Merlin -Merlin GeneMark.hmm exon 57777 58724 . + . ID=Merlin_78_exon;Parent=Merlin_78_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 57777 58724 . + 0 ID=Merlin_78_CDS;Parent=Merlin_78_exon;seqid=Merlin -Merlin GeneMark.hmm gene 58717 58857 -173.930421 + . ID=Merlin_79;seqid=Merlin -Merlin GeneMark.hmm mRNA 58717 58857 . + . ID=Merlin_79_mRNA;Parent=Merlin_79;seqid=Merlin -Merlin GeneMark.hmm exon 58717 58857 . + . ID=Merlin_79_exon;Parent=Merlin_79_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 58717 58857 . + 0 ID=Merlin_79_CDS;Parent=Merlin_79_exon;seqid=Merlin -Merlin GeneMark.hmm gene 58872 59561 -880.645375 + . ID=Merlin_80;seqid=Merlin -Merlin GeneMark.hmm mRNA 58872 59561 . + . ID=Merlin_80_mRNA;Parent=Merlin_80;seqid=Merlin -Merlin GeneMark.hmm exon 58872 59561 . + . ID=Merlin_80_exon;Parent=Merlin_80_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 58872 59561 . + 0 ID=Merlin_80_CDS;Parent=Merlin_80_exon;seqid=Merlin -Merlin GeneMark.hmm gene 59561 59899 -428.109831 + . ID=Merlin_81;seqid=Merlin -Merlin GeneMark.hmm mRNA 59561 59899 . + . ID=Merlin_81_mRNA;Parent=Merlin_81;seqid=Merlin -Merlin GeneMark.hmm exon 59561 59899 . + . ID=Merlin_81_exon;Parent=Merlin_81_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 59561 59899 . + 0 ID=Merlin_81_CDS;Parent=Merlin_81_exon;seqid=Merlin -Merlin GeneMark.hmm gene 59896 60144 -306.923987 + . ID=Merlin_82;seqid=Merlin -Merlin GeneMark.hmm mRNA 59896 60144 . + . ID=Merlin_82_mRNA;Parent=Merlin_82;seqid=Merlin -Merlin GeneMark.hmm exon 59896 60144 . + . ID=Merlin_82_exon;Parent=Merlin_82_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 59896 60144 . + 0 ID=Merlin_82_CDS;Parent=Merlin_82_exon;seqid=Merlin -Merlin GeneMark.hmm gene 60144 60386 -304.982653 + . ID=Merlin_83;seqid=Merlin -Merlin GeneMark.hmm mRNA 60144 60386 . + . ID=Merlin_83_mRNA;Parent=Merlin_83;seqid=Merlin -Merlin GeneMark.hmm exon 60144 60386 . + . ID=Merlin_83_exon;Parent=Merlin_83_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 60144 60386 . + 0 ID=Merlin_83_CDS;Parent=Merlin_83_exon;seqid=Merlin -Merlin GeneMark.hmm gene 60379 60840 -594.547870 + . ID=Merlin_84;seqid=Merlin -Merlin GeneMark.hmm mRNA 60379 60840 . + . ID=Merlin_84_mRNA;Parent=Merlin_84;seqid=Merlin -Merlin GeneMark.hmm exon 60379 60840 . + . ID=Merlin_84_exon;Parent=Merlin_84_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 60379 60840 . + 0 ID=Merlin_84_CDS;Parent=Merlin_84_exon;seqid=Merlin -Merlin GeneMark.hmm gene 60869 61369 -617.611500 + . ID=Merlin_85;seqid=Merlin -Merlin GeneMark.hmm mRNA 60869 61369 . + . ID=Merlin_85_mRNA;Parent=Merlin_85;seqid=Merlin -Merlin GeneMark.hmm exon 60869 61369 . + . ID=Merlin_85_exon;Parent=Merlin_85_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 60869 61369 . + 0 ID=Merlin_85_CDS;Parent=Merlin_85_exon;seqid=Merlin -Merlin GeneMark.hmm gene 61356 61703 -422.353181 + . ID=Merlin_86;seqid=Merlin -Merlin GeneMark.hmm mRNA 61356 61703 . + . ID=Merlin_86_mRNA;Parent=Merlin_86;seqid=Merlin -Merlin GeneMark.hmm exon 61356 61703 . + . ID=Merlin_86_exon;Parent=Merlin_86_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 61356 61703 . + 0 ID=Merlin_86_CDS;Parent=Merlin_86_exon;seqid=Merlin -Merlin GeneMark.hmm gene 61760 62167 -519.180141 + . ID=Merlin_87;seqid=Merlin -Merlin GeneMark.hmm mRNA 61760 62167 . + . ID=Merlin_87_mRNA;Parent=Merlin_87;seqid=Merlin -Merlin GeneMark.hmm exon 61760 62167 . + . ID=Merlin_87_exon;Parent=Merlin_87_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 61760 62167 . + 0 ID=Merlin_87_CDS;Parent=Merlin_87_exon;seqid=Merlin -Merlin GeneMark.hmm gene 62359 62889 -691.422401 + . ID=Merlin_88;seqid=Merlin -Merlin GeneMark.hmm mRNA 62359 62889 . + . ID=Merlin_88_mRNA;Parent=Merlin_88;seqid=Merlin -Merlin GeneMark.hmm exon 62359 62889 . + . ID=Merlin_88_exon;Parent=Merlin_88_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 62359 62889 . + 0 ID=Merlin_88_CDS;Parent=Merlin_88_exon;seqid=Merlin -Merlin GeneMark.hmm gene 62886 63131 -315.050979 + . ID=Merlin_89;seqid=Merlin -Merlin GeneMark.hmm mRNA 62886 63131 . + . ID=Merlin_89_mRNA;Parent=Merlin_89;seqid=Merlin -Merlin GeneMark.hmm exon 62886 63131 . + . ID=Merlin_89_exon;Parent=Merlin_89_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 62886 63131 . + 0 ID=Merlin_89_CDS;Parent=Merlin_89_exon;seqid=Merlin -Merlin GeneMark.hmm gene 63124 63435 -400.565460 + . ID=Merlin_90;seqid=Merlin -Merlin GeneMark.hmm mRNA 63124 63435 . + . ID=Merlin_90_mRNA;Parent=Merlin_90;seqid=Merlin -Merlin GeneMark.hmm exon 63124 63435 . + . ID=Merlin_90_exon;Parent=Merlin_90_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 63124 63435 . + 0 ID=Merlin_90_CDS;Parent=Merlin_90_exon;seqid=Merlin -Merlin GeneMark.hmm gene 63432 63710 -335.031911 + . ID=Merlin_91;seqid=Merlin -Merlin GeneMark.hmm mRNA 63432 63710 . + . ID=Merlin_91_mRNA;Parent=Merlin_91;seqid=Merlin -Merlin GeneMark.hmm exon 63432 63710 . + . ID=Merlin_91_exon;Parent=Merlin_91_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 63432 63710 . + 0 ID=Merlin_91_CDS;Parent=Merlin_91_exon;seqid=Merlin -Merlin GeneMark.hmm gene 63710 63883 -203.175066 + . ID=Merlin_92;seqid=Merlin -Merlin GeneMark.hmm mRNA 63710 63883 . + . ID=Merlin_92_mRNA;Parent=Merlin_92;seqid=Merlin -Merlin GeneMark.hmm exon 63710 63883 . + . ID=Merlin_92_exon;Parent=Merlin_92_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 63710 63883 . + 0 ID=Merlin_92_CDS;Parent=Merlin_92_exon;seqid=Merlin -Merlin GeneMark.hmm gene 63942 64406 -597.655245 + . ID=Merlin_93;seqid=Merlin -Merlin GeneMark.hmm mRNA 63942 64406 . + . ID=Merlin_93_mRNA;Parent=Merlin_93;seqid=Merlin -Merlin GeneMark.hmm exon 63942 64406 . + . ID=Merlin_93_exon;Parent=Merlin_93_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 63942 64406 . + 0 ID=Merlin_93_CDS;Parent=Merlin_93_exon;seqid=Merlin -Merlin GeneMark.hmm gene 64414 64962 -713.810677 + . ID=Merlin_94;seqid=Merlin -Merlin GeneMark.hmm mRNA 64414 64962 . + . ID=Merlin_94_mRNA;Parent=Merlin_94;seqid=Merlin -Merlin GeneMark.hmm exon 64414 64962 . + . ID=Merlin_94_exon;Parent=Merlin_94_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 64414 64962 . + 0 ID=Merlin_94_CDS;Parent=Merlin_94_exon;seqid=Merlin -Merlin GeneMark.hmm gene 64962 65282 -412.685055 + . ID=Merlin_95;seqid=Merlin -Merlin GeneMark.hmm mRNA 64962 65282 . + . ID=Merlin_95_mRNA;Parent=Merlin_95;seqid=Merlin -Merlin GeneMark.hmm exon 64962 65282 . + . ID=Merlin_95_exon;Parent=Merlin_95_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 64962 65282 . + 0 ID=Merlin_95_CDS;Parent=Merlin_95_exon;seqid=Merlin -Merlin GeneMark.hmm gene 65303 65683 -496.639498 + . ID=Merlin_96;seqid=Merlin -Merlin GeneMark.hmm mRNA 65303 65683 . + . ID=Merlin_96_mRNA;Parent=Merlin_96;seqid=Merlin -Merlin GeneMark.hmm exon 65303 65683 . + . ID=Merlin_96_exon;Parent=Merlin_96_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 65303 65683 . + 0 ID=Merlin_96_CDS;Parent=Merlin_96_exon;seqid=Merlin -Merlin GeneMark.hmm gene 65676 66128 -573.822848 + . ID=Merlin_97;seqid=Merlin -Merlin GeneMark.hmm mRNA 65676 66128 . + . ID=Merlin_97_mRNA;Parent=Merlin_97;seqid=Merlin -Merlin GeneMark.hmm exon 65676 66128 . + . ID=Merlin_97_exon;Parent=Merlin_97_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 65676 66128 . + 0 ID=Merlin_97_CDS;Parent=Merlin_97_exon;seqid=Merlin -Merlin GeneMark.hmm gene 66128 66337 -267.423513 + . ID=Merlin_98;seqid=Merlin -Merlin GeneMark.hmm mRNA 66128 66337 . + . ID=Merlin_98_mRNA;Parent=Merlin_98;seqid=Merlin -Merlin GeneMark.hmm exon 66128 66337 . + . ID=Merlin_98_exon;Parent=Merlin_98_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 66128 66337 . + 0 ID=Merlin_98_CDS;Parent=Merlin_98_exon;seqid=Merlin -Merlin GeneMark.hmm gene 66328 66507 -214.194539 + . ID=Merlin_99;seqid=Merlin -Merlin GeneMark.hmm mRNA 66328 66507 . + . ID=Merlin_99_mRNA;Parent=Merlin_99;seqid=Merlin -Merlin GeneMark.hmm exon 66328 66507 . + . ID=Merlin_99_exon;Parent=Merlin_99_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 66328 66507 . + 0 ID=Merlin_99_CDS;Parent=Merlin_99_exon;seqid=Merlin -Merlin GeneMark.hmm gene 66504 66683 -217.450578 + . ID=Merlin_100;seqid=Merlin -Merlin GeneMark.hmm mRNA 66504 66683 . + . ID=Merlin_100_mRNA;Parent=Merlin_100;seqid=Merlin -Merlin GeneMark.hmm exon 66504 66683 . + . ID=Merlin_100_exon;Parent=Merlin_100_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 66504 66683 . + 0 ID=Merlin_100_CDS;Parent=Merlin_100_exon;seqid=Merlin -Merlin GeneMark.hmm gene 66680 66871 -235.908196 + . ID=Merlin_101;seqid=Merlin -Merlin GeneMark.hmm mRNA 66680 66871 . + . ID=Merlin_101_mRNA;Parent=Merlin_101;seqid=Merlin -Merlin GeneMark.hmm exon 66680 66871 . + . ID=Merlin_101_exon;Parent=Merlin_101_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 66680 66871 . + 0 ID=Merlin_101_CDS;Parent=Merlin_101_exon;seqid=Merlin -Merlin GeneMark.hmm gene 66873 67058 -233.275820 + . ID=Merlin_102;seqid=Merlin -Merlin GeneMark.hmm mRNA 66873 67058 . + . ID=Merlin_102_mRNA;Parent=Merlin_102;seqid=Merlin -Merlin GeneMark.hmm exon 66873 67058 . + . ID=Merlin_102_exon;Parent=Merlin_102_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 66873 67058 . + 0 ID=Merlin_102_CDS;Parent=Merlin_102_exon;seqid=Merlin -Merlin GeneMark.hmm gene 67058 67267 -264.096823 + . ID=Merlin_103;seqid=Merlin -Merlin GeneMark.hmm mRNA 67058 67267 . + . ID=Merlin_103_mRNA;Parent=Merlin_103;seqid=Merlin -Merlin GeneMark.hmm exon 67058 67267 . + . ID=Merlin_103_exon;Parent=Merlin_103_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 67058 67267 . + 0 ID=Merlin_103_CDS;Parent=Merlin_103_exon;seqid=Merlin -Merlin GeneMark.hmm gene 67267 67845 -752.300357 + . ID=Merlin_104;seqid=Merlin -Merlin GeneMark.hmm mRNA 67267 67845 . + . ID=Merlin_104_mRNA;Parent=Merlin_104;seqid=Merlin -Merlin GeneMark.hmm exon 67267 67845 . + . ID=Merlin_104_exon;Parent=Merlin_104_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 67267 67845 . + 0 ID=Merlin_104_CDS;Parent=Merlin_104_exon;seqid=Merlin -Merlin GeneMark.hmm gene 67970 68128 -196.227328 + . ID=Merlin_105;seqid=Merlin -Merlin GeneMark.hmm mRNA 67970 68128 . + . ID=Merlin_105_mRNA;Parent=Merlin_105;seqid=Merlin -Merlin GeneMark.hmm exon 67970 68128 . + . ID=Merlin_105_exon;Parent=Merlin_105_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 67970 68128 . + 0 ID=Merlin_105_CDS;Parent=Merlin_105_exon;seqid=Merlin -Merlin GeneMark.hmm gene 68125 68280 -186.665512 + . ID=Merlin_106;seqid=Merlin -Merlin GeneMark.hmm mRNA 68125 68280 . + . ID=Merlin_106_mRNA;Parent=Merlin_106;seqid=Merlin -Merlin GeneMark.hmm exon 68125 68280 . + . ID=Merlin_106_exon;Parent=Merlin_106_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 68125 68280 . + 0 ID=Merlin_106_CDS;Parent=Merlin_106_exon;seqid=Merlin -Merlin GeneMark.hmm gene 68345 68728 -480.408576 + . ID=Merlin_107;seqid=Merlin -Merlin GeneMark.hmm mRNA 68345 68728 . + . ID=Merlin_107_mRNA;Parent=Merlin_107;seqid=Merlin -Merlin GeneMark.hmm exon 68345 68728 . + . ID=Merlin_107_exon;Parent=Merlin_107_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 68345 68728 . + 0 ID=Merlin_107_CDS;Parent=Merlin_107_exon;seqid=Merlin -Merlin GeneMark.hmm gene 68787 68999 -267.936260 + . ID=Merlin_108;seqid=Merlin -Merlin GeneMark.hmm mRNA 68787 68999 . + . ID=Merlin_108_mRNA;Parent=Merlin_108;seqid=Merlin -Merlin GeneMark.hmm exon 68787 68999 . + . ID=Merlin_108_exon;Parent=Merlin_108_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 68787 68999 . + 0 ID=Merlin_108_CDS;Parent=Merlin_108_exon;seqid=Merlin -Merlin GeneMark.hmm gene 69008 69295 -369.655354 + . ID=Merlin_109;seqid=Merlin -Merlin GeneMark.hmm mRNA 69008 69295 . + . ID=Merlin_109_mRNA;Parent=Merlin_109;seqid=Merlin -Merlin GeneMark.hmm exon 69008 69295 . + . ID=Merlin_109_exon;Parent=Merlin_109_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 69008 69295 . + 0 ID=Merlin_109_CDS;Parent=Merlin_109_exon;seqid=Merlin -Merlin GeneMark.hmm gene 69285 69668 -486.207714 + . ID=Merlin_110;seqid=Merlin -Merlin GeneMark.hmm mRNA 69285 69668 . + . ID=Merlin_110_mRNA;Parent=Merlin_110;seqid=Merlin -Merlin GeneMark.hmm exon 69285 69668 . + . ID=Merlin_110_exon;Parent=Merlin_110_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 69285 69668 . + 0 ID=Merlin_110_CDS;Parent=Merlin_110_exon;seqid=Merlin -Merlin GeneMark.hmm gene 69767 69862 -119.090489 + . ID=Merlin_111;seqid=Merlin -Merlin GeneMark.hmm mRNA 69767 69862 . + . ID=Merlin_111_mRNA;Parent=Merlin_111;seqid=Merlin -Merlin GeneMark.hmm exon 69767 69862 . + . ID=Merlin_111_exon;Parent=Merlin_111_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 69767 69862 . + 0 ID=Merlin_111_CDS;Parent=Merlin_111_exon;seqid=Merlin -Merlin GeneMark.hmm gene 69859 70023 -200.738602 + . ID=Merlin_112;seqid=Merlin -Merlin GeneMark.hmm mRNA 69859 70023 . + . ID=Merlin_112_mRNA;Parent=Merlin_112;seqid=Merlin -Merlin GeneMark.hmm exon 69859 70023 . + . ID=Merlin_112_exon;Parent=Merlin_112_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 69859 70023 . + 0 ID=Merlin_112_CDS;Parent=Merlin_112_exon;seqid=Merlin -Merlin GeneMark.hmm gene 70030 70263 -281.446786 + . ID=Merlin_113;seqid=Merlin -Merlin GeneMark.hmm mRNA 70030 70263 . + . ID=Merlin_113_mRNA;Parent=Merlin_113;seqid=Merlin -Merlin GeneMark.hmm exon 70030 70263 . + . ID=Merlin_113_exon;Parent=Merlin_113_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 70030 70263 . + 0 ID=Merlin_113_CDS;Parent=Merlin_113_exon;seqid=Merlin -Merlin GeneMark.hmm gene 70263 70520 -332.653168 + . ID=Merlin_114;seqid=Merlin -Merlin GeneMark.hmm mRNA 70263 70520 . + . ID=Merlin_114_mRNA;Parent=Merlin_114;seqid=Merlin -Merlin GeneMark.hmm exon 70263 70520 . + . ID=Merlin_114_exon;Parent=Merlin_114_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 70263 70520 . + 0 ID=Merlin_114_CDS;Parent=Merlin_114_exon;seqid=Merlin -Merlin GeneMark.hmm gene 70517 70780 -336.190173 + . ID=Merlin_115;seqid=Merlin -Merlin GeneMark.hmm mRNA 70517 70780 . + . ID=Merlin_115_mRNA;Parent=Merlin_115;seqid=Merlin -Merlin GeneMark.hmm exon 70517 70780 . + . ID=Merlin_115_exon;Parent=Merlin_115_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 70517 70780 . + 0 ID=Merlin_115_CDS;Parent=Merlin_115_exon;seqid=Merlin -Merlin GeneMark.hmm gene 70866 71102 -289.943350 + . ID=Merlin_116;seqid=Merlin -Merlin GeneMark.hmm mRNA 70866 71102 . + . ID=Merlin_116_mRNA;Parent=Merlin_116;seqid=Merlin -Merlin GeneMark.hmm exon 70866 71102 . + . ID=Merlin_116_exon;Parent=Merlin_116_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 70866 71102 . + 0 ID=Merlin_116_CDS;Parent=Merlin_116_exon;seqid=Merlin -Merlin GeneMark.hmm gene 71092 71571 -594.658724 + . ID=Merlin_117;seqid=Merlin -Merlin GeneMark.hmm mRNA 71092 71571 . + . ID=Merlin_117_mRNA;Parent=Merlin_117;seqid=Merlin -Merlin GeneMark.hmm exon 71092 71571 . + . ID=Merlin_117_exon;Parent=Merlin_117_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 71092 71571 . + 0 ID=Merlin_117_CDS;Parent=Merlin_117_exon;seqid=Merlin -Merlin GeneMark.hmm gene 71574 72116 -686.096724 + . ID=Merlin_118;seqid=Merlin -Merlin GeneMark.hmm mRNA 71574 72116 . + . ID=Merlin_118_mRNA;Parent=Merlin_118;seqid=Merlin -Merlin GeneMark.hmm exon 71574 72116 . + . ID=Merlin_118_exon;Parent=Merlin_118_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 71574 72116 . + 0 ID=Merlin_118_CDS;Parent=Merlin_118_exon;seqid=Merlin -Merlin GeneMark.hmm gene 72116 73126 -1269.074513 + . ID=Merlin_119;seqid=Merlin -Merlin GeneMark.hmm mRNA 72116 73126 . + . ID=Merlin_119_mRNA;Parent=Merlin_119;seqid=Merlin -Merlin GeneMark.hmm exon 72116 73126 . + . ID=Merlin_119_exon;Parent=Merlin_119_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 72116 73126 . + 0 ID=Merlin_119_CDS;Parent=Merlin_119_exon;seqid=Merlin -Merlin GeneMark.hmm gene 73123 73359 -314.305354 + . ID=Merlin_120;seqid=Merlin -Merlin GeneMark.hmm mRNA 73123 73359 . + . ID=Merlin_120_mRNA;Parent=Merlin_120;seqid=Merlin -Merlin GeneMark.hmm exon 73123 73359 . + . ID=Merlin_120_exon;Parent=Merlin_120_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 73123 73359 . + 0 ID=Merlin_120_CDS;Parent=Merlin_120_exon;seqid=Merlin -Merlin GeneMark.hmm gene 73461 73631 -201.815396 + . ID=Merlin_121;seqid=Merlin -Merlin GeneMark.hmm mRNA 73461 73631 . + . ID=Merlin_121_mRNA;Parent=Merlin_121;seqid=Merlin -Merlin GeneMark.hmm exon 73461 73631 . + . ID=Merlin_121_exon;Parent=Merlin_121_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 73461 73631 . + 0 ID=Merlin_121_CDS;Parent=Merlin_121_exon;seqid=Merlin -Merlin GeneMark.hmm gene 73721 74698 -1210.601194 + . ID=Merlin_122;seqid=Merlin -Merlin GeneMark.hmm mRNA 73721 74698 . + . ID=Merlin_122_mRNA;Parent=Merlin_122;seqid=Merlin -Merlin GeneMark.hmm exon 73721 74698 . + . ID=Merlin_122_exon;Parent=Merlin_122_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 73721 74698 . + 0 ID=Merlin_122_CDS;Parent=Merlin_122_exon;seqid=Merlin -Merlin GeneMark.hmm gene 74744 74893 -185.633773 + . ID=Merlin_123;seqid=Merlin -Merlin GeneMark.hmm mRNA 74744 74893 . + . ID=Merlin_123_mRNA;Parent=Merlin_123;seqid=Merlin -Merlin GeneMark.hmm exon 74744 74893 . + . ID=Merlin_123_exon;Parent=Merlin_123_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 74744 74893 . + 0 ID=Merlin_123_CDS;Parent=Merlin_123_exon;seqid=Merlin -Merlin GeneMark.hmm gene 74890 75141 -315.506963 + . ID=Merlin_124;seqid=Merlin -Merlin GeneMark.hmm mRNA 74890 75141 . + . ID=Merlin_124_mRNA;Parent=Merlin_124;seqid=Merlin -Merlin GeneMark.hmm exon 74890 75141 . + . ID=Merlin_124_exon;Parent=Merlin_124_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 74890 75141 . + 0 ID=Merlin_124_CDS;Parent=Merlin_124_exon;seqid=Merlin -Merlin GeneMark.hmm gene 75141 75602 -594.209518 + . ID=Merlin_125;seqid=Merlin -Merlin GeneMark.hmm mRNA 75141 75602 . + . ID=Merlin_125_mRNA;Parent=Merlin_125;seqid=Merlin -Merlin GeneMark.hmm exon 75141 75602 . + . ID=Merlin_125_exon;Parent=Merlin_125_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 75141 75602 . + 0 ID=Merlin_125_CDS;Parent=Merlin_125_exon;seqid=Merlin -Merlin GeneMark.hmm gene 75602 75865 -344.721707 + . ID=Merlin_126;seqid=Merlin -Merlin GeneMark.hmm mRNA 75602 75865 . + . ID=Merlin_126_mRNA;Parent=Merlin_126;seqid=Merlin -Merlin GeneMark.hmm exon 75602 75865 . + . ID=Merlin_126_exon;Parent=Merlin_126_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 75602 75865 . + 0 ID=Merlin_126_CDS;Parent=Merlin_126_exon;seqid=Merlin -Merlin GeneMark.hmm gene 75856 76044 -230.523164 + . ID=Merlin_127;seqid=Merlin -Merlin GeneMark.hmm mRNA 75856 76044 . + . ID=Merlin_127_mRNA;Parent=Merlin_127;seqid=Merlin -Merlin GeneMark.hmm exon 75856 76044 . + . ID=Merlin_127_exon;Parent=Merlin_127_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 75856 76044 . + 0 ID=Merlin_127_CDS;Parent=Merlin_127_exon;seqid=Merlin -Merlin GeneMark.hmm gene 76041 76367 -416.228479 + . ID=Merlin_128;seqid=Merlin -Merlin GeneMark.hmm mRNA 76041 76367 . + . ID=Merlin_128_mRNA;Parent=Merlin_128;seqid=Merlin -Merlin GeneMark.hmm exon 76041 76367 . + . ID=Merlin_128_exon;Parent=Merlin_128_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 76041 76367 . + 0 ID=Merlin_128_CDS;Parent=Merlin_128_exon;seqid=Merlin -Merlin GeneMark.hmm gene 76546 77334 -987.711287 + . ID=Merlin_129;seqid=Merlin -Merlin GeneMark.hmm mRNA 76546 77334 . + . ID=Merlin_129_mRNA;Parent=Merlin_129;seqid=Merlin -Merlin GeneMark.hmm exon 76546 77334 . + . ID=Merlin_129_exon;Parent=Merlin_129_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 76546 77334 . + 0 ID=Merlin_129_CDS;Parent=Merlin_129_exon;seqid=Merlin -Merlin GeneMark.hmm gene 77420 78424 -1261.524373 + . ID=Merlin_130;seqid=Merlin -Merlin GeneMark.hmm mRNA 77420 78424 . + . ID=Merlin_130_mRNA;Parent=Merlin_130;seqid=Merlin -Merlin GeneMark.hmm exon 77420 78424 . + . ID=Merlin_130_exon;Parent=Merlin_130_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 77420 78424 . + 0 ID=Merlin_130_CDS;Parent=Merlin_130_exon;seqid=Merlin -Merlin GeneMark.hmm gene 78417 78707 -360.350742 + . ID=Merlin_131;seqid=Merlin -Merlin GeneMark.hmm mRNA 78417 78707 . + . ID=Merlin_131_mRNA;Parent=Merlin_131;seqid=Merlin -Merlin GeneMark.hmm exon 78417 78707 . + . ID=Merlin_131_exon;Parent=Merlin_131_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 78417 78707 . + 0 ID=Merlin_131_CDS;Parent=Merlin_131_exon;seqid=Merlin -Merlin GeneMark.hmm gene 78704 79111 -518.845840 + . ID=Merlin_132;seqid=Merlin -Merlin GeneMark.hmm mRNA 78704 79111 . + . ID=Merlin_132_mRNA;Parent=Merlin_132;seqid=Merlin -Merlin GeneMark.hmm exon 78704 79111 . + . ID=Merlin_132_exon;Parent=Merlin_132_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 78704 79111 . + 0 ID=Merlin_132_CDS;Parent=Merlin_132_exon;seqid=Merlin -Merlin GeneMark.hmm gene 79111 79617 -613.282382 + . ID=Merlin_133;seqid=Merlin -Merlin GeneMark.hmm mRNA 79111 79617 . + . ID=Merlin_133_mRNA;Parent=Merlin_133;seqid=Merlin -Merlin GeneMark.hmm exon 79111 79617 . + . ID=Merlin_133_exon;Parent=Merlin_133_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 79111 79617 . + 0 ID=Merlin_133_CDS;Parent=Merlin_133_exon;seqid=Merlin -Merlin GeneMark.hmm gene 79614 79919 -369.305081 + . ID=Merlin_134;seqid=Merlin -Merlin GeneMark.hmm mRNA 79614 79919 . + . ID=Merlin_134_mRNA;Parent=Merlin_134;seqid=Merlin -Merlin GeneMark.hmm exon 79614 79919 . + . ID=Merlin_134_exon;Parent=Merlin_134_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 79614 79919 . + 0 ID=Merlin_134_CDS;Parent=Merlin_134_exon;seqid=Merlin -Merlin GeneMark.hmm gene 79933 80160 -288.575732 + . ID=Merlin_135;seqid=Merlin -Merlin GeneMark.hmm mRNA 79933 80160 . + . ID=Merlin_135_mRNA;Parent=Merlin_135;seqid=Merlin -Merlin GeneMark.hmm exon 79933 80160 . + . ID=Merlin_135_exon;Parent=Merlin_135_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 79933 80160 . + 0 ID=Merlin_135_CDS;Parent=Merlin_135_exon;seqid=Merlin -Merlin GeneMark.hmm gene 80154 80417 -324.958009 + . ID=Merlin_136;seqid=Merlin -Merlin GeneMark.hmm mRNA 80154 80417 . + . ID=Merlin_136_mRNA;Parent=Merlin_136;seqid=Merlin -Merlin GeneMark.hmm exon 80154 80417 . + . ID=Merlin_136_exon;Parent=Merlin_136_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 80154 80417 . + 0 ID=Merlin_136_CDS;Parent=Merlin_136_exon;seqid=Merlin -Merlin GeneMark.hmm gene 80414 80623 -254.916892 + . ID=Merlin_137;seqid=Merlin -Merlin GeneMark.hmm mRNA 80414 80623 . + . ID=Merlin_137_mRNA;Parent=Merlin_137;seqid=Merlin -Merlin GeneMark.hmm exon 80414 80623 . + . ID=Merlin_137_exon;Parent=Merlin_137_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 80414 80623 . + 0 ID=Merlin_137_CDS;Parent=Merlin_137_exon;seqid=Merlin -Merlin GeneMark.hmm gene 80620 80949 -405.138197 + . ID=Merlin_138;seqid=Merlin -Merlin GeneMark.hmm mRNA 80620 80949 . + . ID=Merlin_138_mRNA;Parent=Merlin_138;seqid=Merlin -Merlin GeneMark.hmm exon 80620 80949 . + . ID=Merlin_138_exon;Parent=Merlin_138_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 80620 80949 . + 0 ID=Merlin_138_CDS;Parent=Merlin_138_exon;seqid=Merlin -Merlin GeneMark.hmm gene 80939 81091 -189.705268 + . ID=Merlin_139;seqid=Merlin -Merlin GeneMark.hmm mRNA 80939 81091 . + . ID=Merlin_139_mRNA;Parent=Merlin_139;seqid=Merlin -Merlin GeneMark.hmm exon 80939 81091 . + . ID=Merlin_139_exon;Parent=Merlin_139_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 80939 81091 . + 0 ID=Merlin_139_CDS;Parent=Merlin_139_exon;seqid=Merlin -Merlin GeneMark.hmm gene 81088 81396 -379.041172 + . ID=Merlin_140;seqid=Merlin -Merlin GeneMark.hmm mRNA 81088 81396 . + . ID=Merlin_140_mRNA;Parent=Merlin_140;seqid=Merlin -Merlin GeneMark.hmm exon 81088 81396 . + . ID=Merlin_140_exon;Parent=Merlin_140_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 81088 81396 . + 0 ID=Merlin_140_CDS;Parent=Merlin_140_exon;seqid=Merlin -Merlin GeneMark.hmm gene 81381 81527 -178.904000 + . ID=Merlin_141;seqid=Merlin -Merlin GeneMark.hmm mRNA 81381 81527 . + . ID=Merlin_141_mRNA;Parent=Merlin_141;seqid=Merlin -Merlin GeneMark.hmm exon 81381 81527 . + . ID=Merlin_141_exon;Parent=Merlin_141_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 81381 81527 . + 0 ID=Merlin_141_CDS;Parent=Merlin_141_exon;seqid=Merlin -Merlin GeneMark.hmm gene 81511 81945 -531.842575 + . ID=Merlin_142;seqid=Merlin -Merlin GeneMark.hmm mRNA 81511 81945 . + . ID=Merlin_142_mRNA;Parent=Merlin_142;seqid=Merlin -Merlin GeneMark.hmm exon 81511 81945 . + . ID=Merlin_142_exon;Parent=Merlin_142_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 81511 81945 . + 0 ID=Merlin_142_CDS;Parent=Merlin_142_exon;seqid=Merlin -Merlin GeneMark.hmm gene 81945 82109 -200.193240 + . ID=Merlin_143;seqid=Merlin -Merlin GeneMark.hmm mRNA 81945 82109 . + . ID=Merlin_143_mRNA;Parent=Merlin_143;seqid=Merlin -Merlin GeneMark.hmm exon 81945 82109 . + . ID=Merlin_143_exon;Parent=Merlin_143_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 81945 82109 . + 0 ID=Merlin_143_CDS;Parent=Merlin_143_exon;seqid=Merlin -Merlin GeneMark.hmm gene 82145 82618 -597.711728 + . ID=Merlin_144;seqid=Merlin -Merlin GeneMark.hmm mRNA 82145 82618 . + . ID=Merlin_144_mRNA;Parent=Merlin_144;seqid=Merlin -Merlin GeneMark.hmm exon 82145 82618 . + . ID=Merlin_144_exon;Parent=Merlin_144_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 82145 82618 . + 0 ID=Merlin_144_CDS;Parent=Merlin_144_exon;seqid=Merlin -Merlin GeneMark.hmm gene 82615 84444 -2332.730592 + . ID=Merlin_145;seqid=Merlin -Merlin GeneMark.hmm mRNA 82615 84444 . + . ID=Merlin_145_mRNA;Parent=Merlin_145;seqid=Merlin -Merlin GeneMark.hmm exon 82615 84444 . + . ID=Merlin_145_exon;Parent=Merlin_145_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 82615 84444 . + 0 ID=Merlin_145_CDS;Parent=Merlin_145_exon;seqid=Merlin -Merlin GeneMark.hmm gene 84512 84928 -529.993287 + . ID=Merlin_146;seqid=Merlin -Merlin GeneMark.hmm mRNA 84512 84928 . + . ID=Merlin_146_mRNA;Parent=Merlin_146;seqid=Merlin -Merlin GeneMark.hmm exon 84512 84928 . + . ID=Merlin_146_exon;Parent=Merlin_146_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 84512 84928 . + 0 ID=Merlin_146_CDS;Parent=Merlin_146_exon;seqid=Merlin -Merlin GeneMark.hmm gene 85016 85309 -372.795932 + . ID=Merlin_147;seqid=Merlin -Merlin GeneMark.hmm mRNA 85016 85309 . + . ID=Merlin_147_mRNA;Parent=Merlin_147;seqid=Merlin -Merlin GeneMark.hmm exon 85016 85309 . + . ID=Merlin_147_exon;Parent=Merlin_147_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 85016 85309 . + 0 ID=Merlin_147_CDS;Parent=Merlin_147_exon;seqid=Merlin -Merlin GeneMark.hmm gene 85459 85722 -330.097448 + . ID=Merlin_148;seqid=Merlin -Merlin GeneMark.hmm mRNA 85459 85722 . + . ID=Merlin_148_mRNA;Parent=Merlin_148;seqid=Merlin -Merlin GeneMark.hmm exon 85459 85722 . + . ID=Merlin_148_exon;Parent=Merlin_148_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 85459 85722 . + 0 ID=Merlin_148_CDS;Parent=Merlin_148_exon;seqid=Merlin -Merlin GeneMark.hmm gene 85722 85910 -230.155567 + . ID=Merlin_149;seqid=Merlin -Merlin GeneMark.hmm mRNA 85722 85910 . + . ID=Merlin_149_mRNA;Parent=Merlin_149;seqid=Merlin -Merlin GeneMark.hmm exon 85722 85910 . + . ID=Merlin_149_exon;Parent=Merlin_149_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 85722 85910 . + 0 ID=Merlin_149_CDS;Parent=Merlin_149_exon;seqid=Merlin -Merlin GeneMark.hmm gene 85903 86166 -332.190142 + . ID=Merlin_150;seqid=Merlin -Merlin GeneMark.hmm mRNA 85903 86166 . + . ID=Merlin_150_mRNA;Parent=Merlin_150;seqid=Merlin -Merlin GeneMark.hmm exon 85903 86166 . + . ID=Merlin_150_exon;Parent=Merlin_150_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 85903 86166 . + 0 ID=Merlin_150_CDS;Parent=Merlin_150_exon;seqid=Merlin -Merlin GeneMark.hmm gene 86229 86555 -399.176919 + . ID=Merlin_151;seqid=Merlin -Merlin GeneMark.hmm mRNA 86229 86555 . + . ID=Merlin_151_mRNA;Parent=Merlin_151;seqid=Merlin -Merlin GeneMark.hmm exon 86229 86555 . + . ID=Merlin_151_exon;Parent=Merlin_151_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 86229 86555 . + 0 ID=Merlin_151_CDS;Parent=Merlin_151_exon;seqid=Merlin -Merlin GeneMark.hmm gene 86552 86833 -365.746982 + . ID=Merlin_152;seqid=Merlin -Merlin GeneMark.hmm mRNA 86552 86833 . + . ID=Merlin_152_mRNA;Parent=Merlin_152;seqid=Merlin -Merlin GeneMark.hmm exon 86552 86833 . + . ID=Merlin_152_exon;Parent=Merlin_152_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 86552 86833 . + 0 ID=Merlin_152_CDS;Parent=Merlin_152_exon;seqid=Merlin -Merlin GeneMark.hmm gene 86826 87074 -314.427851 + . ID=Merlin_153;seqid=Merlin -Merlin GeneMark.hmm mRNA 86826 87074 . + . ID=Merlin_153_mRNA;Parent=Merlin_153;seqid=Merlin -Merlin GeneMark.hmm exon 86826 87074 . + . ID=Merlin_153_exon;Parent=Merlin_153_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 86826 87074 . + 0 ID=Merlin_153_CDS;Parent=Merlin_153_exon;seqid=Merlin -Merlin GeneMark.hmm gene 87067 87291 -270.187122 + . ID=Merlin_154;seqid=Merlin -Merlin GeneMark.hmm mRNA 87067 87291 . + . ID=Merlin_154_mRNA;Parent=Merlin_154;seqid=Merlin -Merlin GeneMark.hmm exon 87067 87291 . + . ID=Merlin_154_exon;Parent=Merlin_154_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 87067 87291 . + 0 ID=Merlin_154_CDS;Parent=Merlin_154_exon;seqid=Merlin -Merlin GeneMark.hmm gene 87288 87548 -320.850170 + . ID=Merlin_155;seqid=Merlin -Merlin GeneMark.hmm mRNA 87288 87548 . + . ID=Merlin_155_mRNA;Parent=Merlin_155;seqid=Merlin -Merlin GeneMark.hmm exon 87288 87548 . + . ID=Merlin_155_exon;Parent=Merlin_155_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 87288 87548 . + 0 ID=Merlin_155_CDS;Parent=Merlin_155_exon;seqid=Merlin -Merlin GeneMark.hmm gene 87545 87838 -368.941897 + . ID=Merlin_156;seqid=Merlin -Merlin GeneMark.hmm mRNA 87545 87838 . + . ID=Merlin_156_mRNA;Parent=Merlin_156;seqid=Merlin -Merlin GeneMark.hmm exon 87545 87838 . + . ID=Merlin_156_exon;Parent=Merlin_156_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 87545 87838 . + 0 ID=Merlin_156_CDS;Parent=Merlin_156_exon;seqid=Merlin -Merlin GeneMark.hmm gene 87906 88445 -686.934268 + . ID=Merlin_157;seqid=Merlin -Merlin GeneMark.hmm mRNA 87906 88445 . + . ID=Merlin_157_mRNA;Parent=Merlin_157;seqid=Merlin -Merlin GeneMark.hmm exon 87906 88445 . + . ID=Merlin_157_exon;Parent=Merlin_157_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 87906 88445 . + 0 ID=Merlin_157_CDS;Parent=Merlin_157_exon;seqid=Merlin -Merlin GeneMark.hmm gene 88429 88656 -293.300141 + . ID=Merlin_158;seqid=Merlin -Merlin GeneMark.hmm mRNA 88429 88656 . + . ID=Merlin_158_mRNA;Parent=Merlin_158;seqid=Merlin -Merlin GeneMark.hmm exon 88429 88656 . + . ID=Merlin_158_exon;Parent=Merlin_158_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 88429 88656 . + 0 ID=Merlin_158_CDS;Parent=Merlin_158_exon;seqid=Merlin -Merlin GeneMark.hmm gene 88663 89031 -446.339761 + . ID=Merlin_159;seqid=Merlin -Merlin GeneMark.hmm mRNA 88663 89031 . + . ID=Merlin_159_mRNA;Parent=Merlin_159;seqid=Merlin -Merlin GeneMark.hmm exon 88663 89031 . + . ID=Merlin_159_exon;Parent=Merlin_159_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 88663 89031 . + 0 ID=Merlin_159_CDS;Parent=Merlin_159_exon;seqid=Merlin -Merlin GeneMark.hmm gene 89012 89221 -255.579886 + . ID=Merlin_160;seqid=Merlin -Merlin GeneMark.hmm mRNA 89012 89221 . + . ID=Merlin_160_mRNA;Parent=Merlin_160;seqid=Merlin -Merlin GeneMark.hmm exon 89012 89221 . + . ID=Merlin_160_exon;Parent=Merlin_160_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 89012 89221 . + 0 ID=Merlin_160_CDS;Parent=Merlin_160_exon;seqid=Merlin -Merlin GeneMark.hmm gene 89206 89394 -231.007880 + . ID=Merlin_161;seqid=Merlin -Merlin GeneMark.hmm mRNA 89206 89394 . + . ID=Merlin_161_mRNA;Parent=Merlin_161;seqid=Merlin -Merlin GeneMark.hmm exon 89206 89394 . + . ID=Merlin_161_exon;Parent=Merlin_161_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 89206 89394 . + 0 ID=Merlin_161_CDS;Parent=Merlin_161_exon;seqid=Merlin -Merlin GeneMark.hmm gene 89426 89764 -419.076718 + . ID=Merlin_162;seqid=Merlin -Merlin GeneMark.hmm mRNA 89426 89764 . + . ID=Merlin_162_mRNA;Parent=Merlin_162;seqid=Merlin -Merlin GeneMark.hmm exon 89426 89764 . + . ID=Merlin_162_exon;Parent=Merlin_162_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 89426 89764 . + 0 ID=Merlin_162_CDS;Parent=Merlin_162_exon;seqid=Merlin -Merlin GeneMark.hmm gene 89826 89969 -185.055842 + . ID=Merlin_163;seqid=Merlin -Merlin GeneMark.hmm mRNA 89826 89969 . + . ID=Merlin_163_mRNA;Parent=Merlin_163;seqid=Merlin -Merlin GeneMark.hmm exon 89826 89969 . + . ID=Merlin_163_exon;Parent=Merlin_163_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 89826 89969 . + 0 ID=Merlin_163_CDS;Parent=Merlin_163_exon;seqid=Merlin -Merlin GeneMark.hmm gene 89966 90988 -1312.043599 + . ID=Merlin_164;seqid=Merlin -Merlin GeneMark.hmm mRNA 89966 90988 . + . ID=Merlin_164_mRNA;Parent=Merlin_164;seqid=Merlin -Merlin GeneMark.hmm exon 89966 90988 . + . ID=Merlin_164_exon;Parent=Merlin_164_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 89966 90988 . + 0 ID=Merlin_164_CDS;Parent=Merlin_164_exon;seqid=Merlin -Merlin GeneMark.hmm gene 90985 91191 -254.724476 + . ID=Merlin_165;seqid=Merlin -Merlin GeneMark.hmm mRNA 90985 91191 . + . ID=Merlin_165_mRNA;Parent=Merlin_165;seqid=Merlin -Merlin GeneMark.hmm exon 90985 91191 . + . ID=Merlin_165_exon;Parent=Merlin_165_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 90985 91191 . + 0 ID=Merlin_165_CDS;Parent=Merlin_165_exon;seqid=Merlin -Merlin GeneMark.hmm gene 91188 92870 -2159.860384 + . ID=Merlin_166;seqid=Merlin -Merlin GeneMark.hmm mRNA 91188 92870 . + . ID=Merlin_166_mRNA;Parent=Merlin_166;seqid=Merlin -Merlin GeneMark.hmm exon 91188 92870 . + . ID=Merlin_166_exon;Parent=Merlin_166_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 91188 92870 . + 0 ID=Merlin_166_CDS;Parent=Merlin_166_exon;seqid=Merlin -Merlin GeneMark.hmm gene 92867 93058 -240.822321 + . ID=Merlin_167;seqid=Merlin -Merlin GeneMark.hmm mRNA 92867 93058 . + . ID=Merlin_167_mRNA;Parent=Merlin_167;seqid=Merlin -Merlin GeneMark.hmm exon 92867 93058 . + . ID=Merlin_167_exon;Parent=Merlin_167_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 92867 93058 . + 0 ID=Merlin_167_CDS;Parent=Merlin_167_exon;seqid=Merlin -Merlin GeneMark.hmm gene 93067 93450 -466.762497 + . ID=Merlin_168;seqid=Merlin -Merlin GeneMark.hmm mRNA 93067 93450 . + . ID=Merlin_168_mRNA;Parent=Merlin_168;seqid=Merlin -Merlin GeneMark.hmm exon 93067 93450 . + . ID=Merlin_168_exon;Parent=Merlin_168_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 93067 93450 . + 0 ID=Merlin_168_CDS;Parent=Merlin_168_exon;seqid=Merlin -Merlin GeneMark.hmm gene 93469 94155 -853.161656 + . ID=Merlin_169;seqid=Merlin -Merlin GeneMark.hmm mRNA 93469 94155 . + . ID=Merlin_169_mRNA;Parent=Merlin_169;seqid=Merlin -Merlin GeneMark.hmm exon 93469 94155 . + . ID=Merlin_169_exon;Parent=Merlin_169_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 93469 94155 . + 0 ID=Merlin_169_CDS;Parent=Merlin_169_exon;seqid=Merlin -Merlin GeneMark.hmm gene 94209 95174 -1219.402057 + . ID=Merlin_170;seqid=Merlin -Merlin GeneMark.hmm mRNA 94209 95174 . + . ID=Merlin_170_mRNA;Parent=Merlin_170;seqid=Merlin -Merlin GeneMark.hmm exon 94209 95174 . + . ID=Merlin_170_exon;Parent=Merlin_170_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 94209 95174 . + 0 ID=Merlin_170_CDS;Parent=Merlin_170_exon;seqid=Merlin -Merlin GeneMark.hmm gene 95174 95737 -724.605488 + . ID=Merlin_171;seqid=Merlin -Merlin GeneMark.hmm mRNA 95174 95737 . + . ID=Merlin_171_mRNA;Parent=Merlin_171;seqid=Merlin -Merlin GeneMark.hmm exon 95174 95737 . + . ID=Merlin_171_exon;Parent=Merlin_171_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 95174 95737 . + 0 ID=Merlin_171_CDS;Parent=Merlin_171_exon;seqid=Merlin -Merlin GeneMark.hmm gene 95731 96108 -464.835446 + . ID=Merlin_172;seqid=Merlin -Merlin GeneMark.hmm mRNA 95731 96108 . + . ID=Merlin_172_mRNA;Parent=Merlin_172;seqid=Merlin -Merlin GeneMark.hmm exon 95731 96108 . + . ID=Merlin_172_exon;Parent=Merlin_172_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 95731 96108 . + 0 ID=Merlin_172_CDS;Parent=Merlin_172_exon;seqid=Merlin -Merlin GeneMark.hmm gene 96110 96331 -276.260456 + . ID=Merlin_173;seqid=Merlin -Merlin GeneMark.hmm mRNA 96110 96331 . + . ID=Merlin_173_mRNA;Parent=Merlin_173;seqid=Merlin -Merlin GeneMark.hmm exon 96110 96331 . + . ID=Merlin_173_exon;Parent=Merlin_173_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 96110 96331 . + 0 ID=Merlin_173_CDS;Parent=Merlin_173_exon;seqid=Merlin -Merlin GeneMark.hmm gene 96426 99116 -3385.938661 + . ID=Merlin_174;seqid=Merlin -Merlin GeneMark.hmm mRNA 96426 99116 . + . ID=Merlin_174_mRNA;Parent=Merlin_174;seqid=Merlin -Merlin GeneMark.hmm exon 96426 99116 . + . ID=Merlin_174_exon;Parent=Merlin_174_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 96426 99116 . + 0 ID=Merlin_174_CDS;Parent=Merlin_174_exon;seqid=Merlin -Merlin GeneMark.hmm gene 99179 99418 -294.745409 + . ID=Merlin_175;seqid=Merlin -Merlin GeneMark.hmm mRNA 99179 99418 . + . ID=Merlin_175_mRNA;Parent=Merlin_175;seqid=Merlin -Merlin GeneMark.hmm exon 99179 99418 . + . ID=Merlin_175_exon;Parent=Merlin_175_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 99179 99418 . + 0 ID=Merlin_175_CDS;Parent=Merlin_175_exon;seqid=Merlin -Merlin GeneMark.hmm gene 99455 99895 -551.164186 + . ID=Merlin_176;seqid=Merlin -Merlin GeneMark.hmm mRNA 99455 99895 . + . ID=Merlin_176_mRNA;Parent=Merlin_176;seqid=Merlin -Merlin GeneMark.hmm exon 99455 99895 . + . ID=Merlin_176_exon;Parent=Merlin_176_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 99455 99895 . + 0 ID=Merlin_176_CDS;Parent=Merlin_176_exon;seqid=Merlin -Merlin GeneMark.hmm gene 99928 100140 -262.065624 + . ID=Merlin_177;seqid=Merlin -Merlin GeneMark.hmm mRNA 99928 100140 . + . ID=Merlin_177_mRNA;Parent=Merlin_177;seqid=Merlin -Merlin GeneMark.hmm exon 99928 100140 . + . ID=Merlin_177_exon;Parent=Merlin_177_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 99928 100140 . + 0 ID=Merlin_177_CDS;Parent=Merlin_177_exon;seqid=Merlin -Merlin GeneMark.hmm gene 100137 100877 -927.530517 + . ID=Merlin_178;seqid=Merlin -Merlin GeneMark.hmm mRNA 100137 100877 . + . ID=Merlin_178_mRNA;Parent=Merlin_178;seqid=Merlin -Merlin GeneMark.hmm exon 100137 100877 . + . ID=Merlin_178_exon;Parent=Merlin_178_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 100137 100877 . + 0 ID=Merlin_178_CDS;Parent=Merlin_178_exon;seqid=Merlin -Merlin GeneMark.hmm gene 100868 101704 -1058.313313 + . ID=Merlin_179;seqid=Merlin -Merlin GeneMark.hmm mRNA 100868 101704 . + . ID=Merlin_179_mRNA;Parent=Merlin_179;seqid=Merlin -Merlin GeneMark.hmm exon 100868 101704 . + . ID=Merlin_179_exon;Parent=Merlin_179_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 100868 101704 . + 0 ID=Merlin_179_CDS;Parent=Merlin_179_exon;seqid=Merlin -Merlin GeneMark.hmm gene 101701 102777 -1345.602625 + . ID=Merlin_180;seqid=Merlin -Merlin GeneMark.hmm mRNA 101701 102777 . + . ID=Merlin_180_mRNA;Parent=Merlin_180;seqid=Merlin -Merlin GeneMark.hmm exon 101701 102777 . + . ID=Merlin_180_exon;Parent=Merlin_180_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 101701 102777 . + 0 ID=Merlin_180_CDS;Parent=Merlin_180_exon;seqid=Merlin -Merlin GeneMark.hmm gene 102885 104072 -1483.608352 + . ID=Merlin_181;seqid=Merlin -Merlin GeneMark.hmm mRNA 102885 104072 . + . ID=Merlin_181_mRNA;Parent=Merlin_181;seqid=Merlin -Merlin GeneMark.hmm exon 102885 104072 . + . ID=Merlin_181_exon;Parent=Merlin_181_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 102885 104072 . + 0 ID=Merlin_181_CDS;Parent=Merlin_181_exon;seqid=Merlin -Merlin GeneMark.hmm gene 104072 104422 -451.869493 + . ID=Merlin_182;seqid=Merlin -Merlin GeneMark.hmm mRNA 104072 104422 . + . ID=Merlin_182_mRNA;Parent=Merlin_182;seqid=Merlin -Merlin GeneMark.hmm exon 104072 104422 . + . ID=Merlin_182_exon;Parent=Merlin_182_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 104072 104422 . + 0 ID=Merlin_182_CDS;Parent=Merlin_182_exon;seqid=Merlin -Merlin GeneMark.hmm gene 104500 105867 -1730.587045 + . ID=Merlin_183;seqid=Merlin -Merlin GeneMark.hmm mRNA 104500 105867 . + . ID=Merlin_183_mRNA;Parent=Merlin_183;seqid=Merlin -Merlin GeneMark.hmm exon 104500 105867 . + . ID=Merlin_183_exon;Parent=Merlin_183_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 104500 105867 . + 0 ID=Merlin_183_CDS;Parent=Merlin_183_exon;seqid=Merlin -Merlin GeneMark.hmm gene 105928 106209 -352.988779 + . ID=Merlin_184;seqid=Merlin -Merlin GeneMark.hmm mRNA 105928 106209 . + . ID=Merlin_184_mRNA;Parent=Merlin_184;seqid=Merlin -Merlin GeneMark.hmm exon 105928 106209 . + . ID=Merlin_184_exon;Parent=Merlin_184_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 105928 106209 . + 0 ID=Merlin_184_CDS;Parent=Merlin_184_exon;seqid=Merlin -Merlin GeneMark.hmm gene 106209 106487 -351.122469 + . ID=Merlin_185;seqid=Merlin -Merlin GeneMark.hmm mRNA 106209 106487 . + . ID=Merlin_185_mRNA;Parent=Merlin_185;seqid=Merlin -Merlin GeneMark.hmm exon 106209 106487 . + . ID=Merlin_185_exon;Parent=Merlin_185_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 106209 106487 . + 0 ID=Merlin_185_CDS;Parent=Merlin_185_exon;seqid=Merlin -Merlin GeneMark.hmm gene 106487 106684 -246.970187 + . ID=Merlin_186;seqid=Merlin -Merlin GeneMark.hmm mRNA 106487 106684 . + . ID=Merlin_186_mRNA;Parent=Merlin_186;seqid=Merlin -Merlin GeneMark.hmm exon 106487 106684 . + . ID=Merlin_186_exon;Parent=Merlin_186_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 106487 106684 . + 0 ID=Merlin_186_CDS;Parent=Merlin_186_exon;seqid=Merlin -Merlin GeneMark.hmm gene 106699 107163 -615.053890 + . ID=Merlin_187;seqid=Merlin -Merlin GeneMark.hmm mRNA 106699 107163 . + . ID=Merlin_187_mRNA;Parent=Merlin_187;seqid=Merlin -Merlin GeneMark.hmm exon 106699 107163 . + . ID=Merlin_187_exon;Parent=Merlin_187_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 106699 107163 . + 0 ID=Merlin_187_CDS;Parent=Merlin_187_exon;seqid=Merlin -Merlin GeneMark.hmm gene 107200 108225 -1324.566436 + . ID=Merlin_188;seqid=Merlin -Merlin GeneMark.hmm mRNA 107200 108225 . + . ID=Merlin_188_mRNA;Parent=Merlin_188;seqid=Merlin -Merlin GeneMark.hmm exon 107200 108225 . + . ID=Merlin_188_exon;Parent=Merlin_188_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 107200 108225 . + 0 ID=Merlin_188_CDS;Parent=Merlin_188_exon;seqid=Merlin -Merlin GeneMark.hmm gene 108222 108419 -244.299886 - . ID=Merlin_189;seqid=Merlin -Merlin GeneMark.hmm mRNA 108222 108419 . - . ID=Merlin_189_mRNA;Parent=Merlin_189;seqid=Merlin -Merlin GeneMark.hmm exon 108222 108419 . - . ID=Merlin_189_exon;Parent=Merlin_189_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 108222 108419 . - 0 ID=Merlin_189_CDS;Parent=Merlin_189_exon;seqid=Merlin -Merlin GeneMark.hmm gene 108443 108727 -361.722638 + . ID=Merlin_190;seqid=Merlin -Merlin GeneMark.hmm mRNA 108443 108727 . + . ID=Merlin_190_mRNA;Parent=Merlin_190;seqid=Merlin -Merlin GeneMark.hmm exon 108443 108727 . + . ID=Merlin_190_exon;Parent=Merlin_190_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 108443 108727 . + 0 ID=Merlin_190_CDS;Parent=Merlin_190_exon;seqid=Merlin -Merlin GeneMark.hmm gene 108746 109267 -660.122856 + . ID=Merlin_191;seqid=Merlin -Merlin GeneMark.hmm mRNA 108746 109267 . + . ID=Merlin_191_mRNA;Parent=Merlin_191;seqid=Merlin -Merlin GeneMark.hmm exon 108746 109267 . + . ID=Merlin_191_exon;Parent=Merlin_191_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 108746 109267 . + 0 ID=Merlin_191_CDS;Parent=Merlin_191_exon;seqid=Merlin -Merlin GeneMark.hmm gene 109283 109450 -207.369336 + . ID=Merlin_192;seqid=Merlin -Merlin GeneMark.hmm mRNA 109283 109450 . + . ID=Merlin_192_mRNA;Parent=Merlin_192;seqid=Merlin -Merlin GeneMark.hmm exon 109283 109450 . + . ID=Merlin_192_exon;Parent=Merlin_192_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 109283 109450 . + 0 ID=Merlin_192_CDS;Parent=Merlin_192_exon;seqid=Merlin -Merlin GeneMark.hmm gene 109463 109684 -282.485263 + . ID=Merlin_193;seqid=Merlin -Merlin GeneMark.hmm mRNA 109463 109684 . + . ID=Merlin_193_mRNA;Parent=Merlin_193;seqid=Merlin -Merlin GeneMark.hmm exon 109463 109684 . + . ID=Merlin_193_exon;Parent=Merlin_193_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 109463 109684 . + 0 ID=Merlin_193_CDS;Parent=Merlin_193_exon;seqid=Merlin -Merlin GeneMark.hmm gene 109681 109833 -188.437796 + . ID=Merlin_194;seqid=Merlin -Merlin GeneMark.hmm mRNA 109681 109833 . + . ID=Merlin_194_mRNA;Parent=Merlin_194;seqid=Merlin -Merlin GeneMark.hmm exon 109681 109833 . + . ID=Merlin_194_exon;Parent=Merlin_194_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 109681 109833 . + 0 ID=Merlin_194_CDS;Parent=Merlin_194_exon;seqid=Merlin -Merlin GeneMark.hmm gene 109868 110107 -300.363740 + . ID=Merlin_195;seqid=Merlin -Merlin GeneMark.hmm mRNA 109868 110107 . + . ID=Merlin_195_mRNA;Parent=Merlin_195;seqid=Merlin -Merlin GeneMark.hmm exon 109868 110107 . + . ID=Merlin_195_exon;Parent=Merlin_195_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 109868 110107 . + 0 ID=Merlin_195_CDS;Parent=Merlin_195_exon;seqid=Merlin -Merlin GeneMark.hmm gene 110187 110387 -242.566720 + . ID=Merlin_196;seqid=Merlin -Merlin GeneMark.hmm mRNA 110187 110387 . + . ID=Merlin_196_mRNA;Parent=Merlin_196;seqid=Merlin -Merlin GeneMark.hmm exon 110187 110387 . + . ID=Merlin_196_exon;Parent=Merlin_196_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 110187 110387 . + 0 ID=Merlin_196_CDS;Parent=Merlin_196_exon;seqid=Merlin -Merlin GeneMark.hmm gene 110384 110623 -295.174485 + . ID=Merlin_197;seqid=Merlin -Merlin GeneMark.hmm mRNA 110384 110623 . + . ID=Merlin_197_mRNA;Parent=Merlin_197;seqid=Merlin -Merlin GeneMark.hmm exon 110384 110623 . + . ID=Merlin_197_exon;Parent=Merlin_197_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 110384 110623 . + 0 ID=Merlin_197_CDS;Parent=Merlin_197_exon;seqid=Merlin -Merlin GeneMark.hmm gene 110620 111051 -544.978023 + . ID=Merlin_198;seqid=Merlin -Merlin GeneMark.hmm mRNA 110620 111051 . + . ID=Merlin_198_mRNA;Parent=Merlin_198;seqid=Merlin -Merlin GeneMark.hmm exon 110620 111051 . + . ID=Merlin_198_exon;Parent=Merlin_198_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 110620 111051 . + 0 ID=Merlin_198_CDS;Parent=Merlin_198_exon;seqid=Merlin -Merlin GeneMark.hmm gene 111101 111238 -161.794612 + . ID=Merlin_199;seqid=Merlin -Merlin GeneMark.hmm mRNA 111101 111238 . + . ID=Merlin_199_mRNA;Parent=Merlin_199;seqid=Merlin -Merlin GeneMark.hmm exon 111101 111238 . + . ID=Merlin_199_exon;Parent=Merlin_199_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 111101 111238 . + 0 ID=Merlin_199_CDS;Parent=Merlin_199_exon;seqid=Merlin -Merlin GeneMark.hmm gene 111213 111737 -670.599096 + . ID=Merlin_200;seqid=Merlin -Merlin GeneMark.hmm mRNA 111213 111737 . + . ID=Merlin_200_mRNA;Parent=Merlin_200;seqid=Merlin -Merlin GeneMark.hmm exon 111213 111737 . + . ID=Merlin_200_exon;Parent=Merlin_200_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 111213 111737 . + 0 ID=Merlin_200_CDS;Parent=Merlin_200_exon;seqid=Merlin -Merlin GeneMark.hmm gene 111737 111913 -223.231704 + . ID=Merlin_201;seqid=Merlin -Merlin GeneMark.hmm mRNA 111737 111913 . + . ID=Merlin_201_mRNA;Parent=Merlin_201;seqid=Merlin -Merlin GeneMark.hmm exon 111737 111913 . + . ID=Merlin_201_exon;Parent=Merlin_201_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 111737 111913 . + 0 ID=Merlin_201_CDS;Parent=Merlin_201_exon;seqid=Merlin -Merlin GeneMark.hmm gene 111973 112590 -802.696887 + . ID=Merlin_202;seqid=Merlin -Merlin GeneMark.hmm mRNA 111973 112590 . + . ID=Merlin_202_mRNA;Parent=Merlin_202;seqid=Merlin -Merlin GeneMark.hmm exon 111973 112590 . + . ID=Merlin_202_exon;Parent=Merlin_202_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 111973 112590 . + 0 ID=Merlin_202_CDS;Parent=Merlin_202_exon;seqid=Merlin -Merlin GeneMark.hmm gene 112676 113461 -994.252012 + . ID=Merlin_203;seqid=Merlin -Merlin GeneMark.hmm mRNA 112676 113461 . + . ID=Merlin_203_mRNA;Parent=Merlin_203;seqid=Merlin -Merlin GeneMark.hmm exon 112676 113461 . + . ID=Merlin_203_exon;Parent=Merlin_203_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 112676 113461 . + 0 ID=Merlin_203_CDS;Parent=Merlin_203_exon;seqid=Merlin -Merlin GeneMark.hmm gene 113461 113778 -389.300206 + . ID=Merlin_204;seqid=Merlin -Merlin GeneMark.hmm mRNA 113461 113778 . + . ID=Merlin_204_mRNA;Parent=Merlin_204;seqid=Merlin -Merlin GeneMark.hmm exon 113461 113778 . + . ID=Merlin_204_exon;Parent=Merlin_204_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 113461 113778 . + 0 ID=Merlin_204_CDS;Parent=Merlin_204_exon;seqid=Merlin -Merlin GeneMark.hmm gene 113787 115118 -1697.881894 + . ID=Merlin_205;seqid=Merlin -Merlin GeneMark.hmm mRNA 113787 115118 . + . ID=Merlin_205_mRNA;Parent=Merlin_205;seqid=Merlin -Merlin GeneMark.hmm exon 113787 115118 . + . ID=Merlin_205_exon;Parent=Merlin_205_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 113787 115118 . + 0 ID=Merlin_205_CDS;Parent=Merlin_205_exon;seqid=Merlin -Merlin GeneMark.hmm gene 115125 115355 -279.940476 + . ID=Merlin_206;seqid=Merlin -Merlin GeneMark.hmm mRNA 115125 115355 . + . ID=Merlin_206_mRNA;Parent=Merlin_206;seqid=Merlin -Merlin GeneMark.hmm exon 115125 115355 . + . ID=Merlin_206_exon;Parent=Merlin_206_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 115125 115355 . + 0 ID=Merlin_206_CDS;Parent=Merlin_206_exon;seqid=Merlin -Merlin GeneMark.hmm gene 115346 116038 -870.417189 + . ID=Merlin_207;seqid=Merlin -Merlin GeneMark.hmm mRNA 115346 116038 . + . ID=Merlin_207_mRNA;Parent=Merlin_207;seqid=Merlin -Merlin GeneMark.hmm exon 115346 116038 . + . ID=Merlin_207_exon;Parent=Merlin_207_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 115346 116038 . + 0 ID=Merlin_207_CDS;Parent=Merlin_207_exon;seqid=Merlin -Merlin GeneMark.hmm gene 116040 116453 -527.653367 + . ID=Merlin_208;seqid=Merlin -Merlin GeneMark.hmm mRNA 116040 116453 . + . ID=Merlin_208_mRNA;Parent=Merlin_208;seqid=Merlin -Merlin GeneMark.hmm exon 116040 116453 . + . ID=Merlin_208_exon;Parent=Merlin_208_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 116040 116453 . + 0 ID=Merlin_208_CDS;Parent=Merlin_208_exon;seqid=Merlin -Merlin GeneMark.hmm gene 116520 116714 -243.312871 + . ID=Merlin_209;seqid=Merlin -Merlin GeneMark.hmm mRNA 116520 116714 . + . ID=Merlin_209_mRNA;Parent=Merlin_209;seqid=Merlin -Merlin GeneMark.hmm exon 116520 116714 . + . ID=Merlin_209_exon;Parent=Merlin_209_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 116520 116714 . + 0 ID=Merlin_209_CDS;Parent=Merlin_209_exon;seqid=Merlin -Merlin GeneMark.hmm gene 116714 117190 -587.212745 + . ID=Merlin_210;seqid=Merlin -Merlin GeneMark.hmm mRNA 116714 117190 . + . ID=Merlin_210_mRNA;Parent=Merlin_210;seqid=Merlin -Merlin GeneMark.hmm exon 116714 117190 . + . ID=Merlin_210_exon;Parent=Merlin_210_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 116714 117190 . + 0 ID=Merlin_210_CDS;Parent=Merlin_210_exon;seqid=Merlin -Merlin GeneMark.hmm gene 117177 117371 -246.741774 + . ID=Merlin_211;seqid=Merlin -Merlin GeneMark.hmm mRNA 117177 117371 . + . ID=Merlin_211_mRNA;Parent=Merlin_211;seqid=Merlin -Merlin GeneMark.hmm exon 117177 117371 . + . ID=Merlin_211_exon;Parent=Merlin_211_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 117177 117371 . + 0 ID=Merlin_211_CDS;Parent=Merlin_211_exon;seqid=Merlin -Merlin GeneMark.hmm gene 117368 117844 -587.223837 + . ID=Merlin_212;seqid=Merlin -Merlin GeneMark.hmm mRNA 117368 117844 . + . ID=Merlin_212_mRNA;Parent=Merlin_212;seqid=Merlin -Merlin GeneMark.hmm exon 117368 117844 . + . ID=Merlin_212_exon;Parent=Merlin_212_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 117368 117844 . + 0 ID=Merlin_212_CDS;Parent=Merlin_212_exon;seqid=Merlin -Merlin GeneMark.hmm gene 117841 117939 -117.153787 + . ID=Merlin_213;seqid=Merlin -Merlin GeneMark.hmm mRNA 117841 117939 . + . ID=Merlin_213_mRNA;Parent=Merlin_213;seqid=Merlin -Merlin GeneMark.hmm exon 117841 117939 . + . ID=Merlin_213_exon;Parent=Merlin_213_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 117841 117939 . + 0 ID=Merlin_213_CDS;Parent=Merlin_213_exon;seqid=Merlin -Merlin GeneMark.hmm gene 117936 118187 -314.341261 + . ID=Merlin_214;seqid=Merlin -Merlin GeneMark.hmm mRNA 117936 118187 . + . ID=Merlin_214_mRNA;Parent=Merlin_214;seqid=Merlin -Merlin GeneMark.hmm exon 117936 118187 . + . ID=Merlin_214_exon;Parent=Merlin_214_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 117936 118187 . + 0 ID=Merlin_214_CDS;Parent=Merlin_214_exon;seqid=Merlin -Merlin GeneMark.hmm gene 118184 118411 -293.015141 + . ID=Merlin_215;seqid=Merlin -Merlin GeneMark.hmm mRNA 118184 118411 . + . ID=Merlin_215_mRNA;Parent=Merlin_215;seqid=Merlin -Merlin GeneMark.hmm exon 118184 118411 . + . ID=Merlin_215_exon;Parent=Merlin_215_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 118184 118411 . + 0 ID=Merlin_215_CDS;Parent=Merlin_215_exon;seqid=Merlin -Merlin GeneMark.hmm gene 118435 118818 -477.204459 + . ID=Merlin_216;seqid=Merlin -Merlin GeneMark.hmm mRNA 118435 118818 . + . ID=Merlin_216_mRNA;Parent=Merlin_216;seqid=Merlin -Merlin GeneMark.hmm exon 118435 118818 . + . ID=Merlin_216_exon;Parent=Merlin_216_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 118435 118818 . + 0 ID=Merlin_216_CDS;Parent=Merlin_216_exon;seqid=Merlin -Merlin GeneMark.hmm gene 118849 120690 -2259.486004 + . ID=Merlin_217;seqid=Merlin -Merlin GeneMark.hmm mRNA 118849 120690 . + . ID=Merlin_217_mRNA;Parent=Merlin_217;seqid=Merlin -Merlin GeneMark.hmm exon 118849 120690 . + . ID=Merlin_217_exon;Parent=Merlin_217_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 118849 120690 . + 0 ID=Merlin_217_CDS;Parent=Merlin_217_exon;seqid=Merlin -Merlin GeneMark.hmm gene 120730 120885 -200.778885 + . ID=Merlin_218;seqid=Merlin -Merlin GeneMark.hmm mRNA 120730 120885 . + . ID=Merlin_218_mRNA;Parent=Merlin_218;seqid=Merlin -Merlin GeneMark.hmm exon 120730 120885 . + . ID=Merlin_218_exon;Parent=Merlin_218_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 120730 120885 . + 0 ID=Merlin_218_CDS;Parent=Merlin_218_exon;seqid=Merlin -Merlin GeneMark.hmm gene 120929 121213 -363.032822 + . ID=Merlin_219;seqid=Merlin -Merlin GeneMark.hmm mRNA 120929 121213 . + . ID=Merlin_219_mRNA;Parent=Merlin_219;seqid=Merlin -Merlin GeneMark.hmm exon 120929 121213 . + . ID=Merlin_219_exon;Parent=Merlin_219_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 120929 121213 . + 0 ID=Merlin_219_CDS;Parent=Merlin_219_exon;seqid=Merlin -Merlin GeneMark.hmm gene 121200 121400 -244.392369 + . ID=Merlin_220;seqid=Merlin -Merlin GeneMark.hmm mRNA 121200 121400 . + . ID=Merlin_220_mRNA;Parent=Merlin_220;seqid=Merlin -Merlin GeneMark.hmm exon 121200 121400 . + . ID=Merlin_220_exon;Parent=Merlin_220_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 121200 121400 . + 0 ID=Merlin_220_CDS;Parent=Merlin_220_exon;seqid=Merlin -Merlin GeneMark.hmm gene 121411 123588 -2750.112191 + . ID=Merlin_221;seqid=Merlin -Merlin GeneMark.hmm mRNA 121411 123588 . + . ID=Merlin_221_mRNA;Parent=Merlin_221;seqid=Merlin -Merlin GeneMark.hmm exon 121411 123588 . + . ID=Merlin_221_exon;Parent=Merlin_221_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 121411 123588 . + 0 ID=Merlin_221_CDS;Parent=Merlin_221_exon;seqid=Merlin -Merlin GeneMark.hmm gene 123598 124494 -1129.990261 + . ID=Merlin_222;seqid=Merlin -Merlin GeneMark.hmm mRNA 123598 124494 . + . ID=Merlin_222_mRNA;Parent=Merlin_222;seqid=Merlin -Merlin GeneMark.hmm exon 123598 124494 . + . ID=Merlin_222_exon;Parent=Merlin_222_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 123598 124494 . + 0 ID=Merlin_222_CDS;Parent=Merlin_222_exon;seqid=Merlin -Merlin GeneMark.hmm gene 124494 124691 -244.507612 + . ID=Merlin_223;seqid=Merlin -Merlin GeneMark.hmm mRNA 124494 124691 . + . ID=Merlin_223_mRNA;Parent=Merlin_223;seqid=Merlin -Merlin GeneMark.hmm exon 124494 124691 . + . ID=Merlin_223_exon;Parent=Merlin_223_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 124494 124691 . + 0 ID=Merlin_223_CDS;Parent=Merlin_223_exon;seqid=Merlin -Merlin GeneMark.hmm gene 124727 125047 -399.871946 + . ID=Merlin_224;seqid=Merlin -Merlin GeneMark.hmm mRNA 124727 125047 . + . ID=Merlin_224_mRNA;Parent=Merlin_224;seqid=Merlin -Merlin GeneMark.hmm exon 124727 125047 . + . ID=Merlin_224_exon;Parent=Merlin_224_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 124727 125047 . + 0 ID=Merlin_224_CDS;Parent=Merlin_224_exon;seqid=Merlin -Merlin GeneMark.hmm gene 125097 125537 -571.759726 + . ID=Merlin_225;seqid=Merlin -Merlin GeneMark.hmm mRNA 125097 125537 . + . ID=Merlin_225_mRNA;Parent=Merlin_225;seqid=Merlin -Merlin GeneMark.hmm exon 125097 125537 . + . ID=Merlin_225_exon;Parent=Merlin_225_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 125097 125537 . + 0 ID=Merlin_225_CDS;Parent=Merlin_225_exon;seqid=Merlin -Merlin GeneMark.hmm gene 125606 125851 -292.219635 + . ID=Merlin_226;seqid=Merlin -Merlin GeneMark.hmm mRNA 125606 125851 . + . ID=Merlin_226_mRNA;Parent=Merlin_226;seqid=Merlin -Merlin GeneMark.hmm exon 125606 125851 . + . ID=Merlin_226_exon;Parent=Merlin_226_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 125606 125851 . + 0 ID=Merlin_226_CDS;Parent=Merlin_226_exon;seqid=Merlin -Merlin GeneMark.hmm gene 125848 126039 -240.766275 + . ID=Merlin_227;seqid=Merlin -Merlin GeneMark.hmm mRNA 125848 126039 . + . ID=Merlin_227_mRNA;Parent=Merlin_227;seqid=Merlin -Merlin GeneMark.hmm exon 125848 126039 . + . ID=Merlin_227_exon;Parent=Merlin_227_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 125848 126039 . + 0 ID=Merlin_227_CDS;Parent=Merlin_227_exon;seqid=Merlin -Merlin GeneMark.hmm gene 126096 126536 -555.654560 + . ID=Merlin_228;seqid=Merlin -Merlin GeneMark.hmm mRNA 126096 126536 . + . ID=Merlin_228_mRNA;Parent=Merlin_228;seqid=Merlin -Merlin GeneMark.hmm exon 126096 126536 . + . ID=Merlin_228_exon;Parent=Merlin_228_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 126096 126536 . + 0 ID=Merlin_228_CDS;Parent=Merlin_228_exon;seqid=Merlin -Merlin GeneMark.hmm gene 126843 126980 -167.572589 + . ID=Merlin_229;seqid=Merlin -Merlin GeneMark.hmm mRNA 126843 126980 . + . ID=Merlin_229_mRNA;Parent=Merlin_229;seqid=Merlin -Merlin GeneMark.hmm exon 126843 126980 . + . ID=Merlin_229_exon;Parent=Merlin_229_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 126843 126980 . + 0 ID=Merlin_229_CDS;Parent=Merlin_229_exon;seqid=Merlin -Merlin GeneMark.hmm gene 126985 128322 -1655.641432 + . ID=Merlin_230;seqid=Merlin -Merlin GeneMark.hmm mRNA 126985 128322 . + . ID=Merlin_230_mRNA;Parent=Merlin_230;seqid=Merlin -Merlin GeneMark.hmm exon 126985 128322 . + . ID=Merlin_230_exon;Parent=Merlin_230_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 126985 128322 . + 0 ID=Merlin_230_CDS;Parent=Merlin_230_exon;seqid=Merlin -Merlin GeneMark.hmm gene 128313 128453 -176.429391 + . ID=Merlin_231;seqid=Merlin -Merlin GeneMark.hmm mRNA 128313 128453 . + . ID=Merlin_231_mRNA;Parent=Merlin_231;seqid=Merlin -Merlin GeneMark.hmm exon 128313 128453 . + . ID=Merlin_231_exon;Parent=Merlin_231_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 128313 128453 . + 0 ID=Merlin_231_CDS;Parent=Merlin_231_exon;seqid=Merlin -Merlin GeneMark.hmm gene 128634 128867 -280.339767 + . ID=Merlin_232;seqid=Merlin -Merlin GeneMark.hmm mRNA 128634 128867 . + . ID=Merlin_232_mRNA;Parent=Merlin_232;seqid=Merlin -Merlin GeneMark.hmm exon 128634 128867 . + . ID=Merlin_232_exon;Parent=Merlin_232_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 128634 128867 . + 0 ID=Merlin_232_CDS;Parent=Merlin_232_exon;seqid=Merlin -Merlin GeneMark.hmm gene 128931 129194 -323.191370 + . ID=Merlin_233;seqid=Merlin -Merlin GeneMark.hmm mRNA 128931 129194 . + . ID=Merlin_233_mRNA;Parent=Merlin_233;seqid=Merlin -Merlin GeneMark.hmm exon 128931 129194 . + . ID=Merlin_233_exon;Parent=Merlin_233_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 128931 129194 . + 0 ID=Merlin_233_CDS;Parent=Merlin_233_exon;seqid=Merlin -Merlin GeneMark.hmm gene 129202 129471 -345.520317 + . ID=Merlin_234;seqid=Merlin -Merlin GeneMark.hmm mRNA 129202 129471 . + . ID=Merlin_234_mRNA;Parent=Merlin_234;seqid=Merlin -Merlin GeneMark.hmm exon 129202 129471 . + . ID=Merlin_234_exon;Parent=Merlin_234_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 129202 129471 . + 0 ID=Merlin_234_CDS;Parent=Merlin_234_exon;seqid=Merlin -Merlin GeneMark.hmm gene 129581 130225 -789.527965 + . ID=Merlin_235;seqid=Merlin -Merlin GeneMark.hmm mRNA 129581 130225 . + . ID=Merlin_235_mRNA;Parent=Merlin_235;seqid=Merlin -Merlin GeneMark.hmm exon 129581 130225 . + . ID=Merlin_235_exon;Parent=Merlin_235_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 129581 130225 . + 0 ID=Merlin_235_CDS;Parent=Merlin_235_exon;seqid=Merlin -Merlin GeneMark.hmm gene 130236 130643 -513.741632 + . ID=Merlin_236;seqid=Merlin -Merlin GeneMark.hmm mRNA 130236 130643 . + . ID=Merlin_236_mRNA;Parent=Merlin_236;seqid=Merlin -Merlin GeneMark.hmm exon 130236 130643 . + . ID=Merlin_236_exon;Parent=Merlin_236_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 130236 130643 . + 0 ID=Merlin_236_CDS;Parent=Merlin_236_exon;seqid=Merlin -Merlin GeneMark.hmm gene 130640 131017 -476.781736 + . ID=Merlin_237;seqid=Merlin -Merlin GeneMark.hmm mRNA 130640 131017 . + . ID=Merlin_237_mRNA;Parent=Merlin_237;seqid=Merlin -Merlin GeneMark.hmm exon 130640 131017 . + . ID=Merlin_237_exon;Parent=Merlin_237_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 130640 131017 . + 0 ID=Merlin_237_CDS;Parent=Merlin_237_exon;seqid=Merlin -Merlin GeneMark.hmm gene 131017 131289 -326.061964 + . ID=Merlin_238;seqid=Merlin -Merlin GeneMark.hmm mRNA 131017 131289 . + . ID=Merlin_238_mRNA;Parent=Merlin_238;seqid=Merlin -Merlin GeneMark.hmm exon 131017 131289 . + . ID=Merlin_238_exon;Parent=Merlin_238_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 131017 131289 . + 0 ID=Merlin_238_CDS;Parent=Merlin_238_exon;seqid=Merlin -Merlin GeneMark.hmm gene 131289 131597 -389.454269 + . ID=Merlin_239;seqid=Merlin -Merlin GeneMark.hmm mRNA 131289 131597 . + . ID=Merlin_239_mRNA;Parent=Merlin_239;seqid=Merlin -Merlin GeneMark.hmm exon 131289 131597 . + . ID=Merlin_239_exon;Parent=Merlin_239_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 131289 131597 . + 0 ID=Merlin_239_CDS;Parent=Merlin_239_exon;seqid=Merlin -Merlin GeneMark.hmm gene 131569 131781 -264.904995 + . ID=Merlin_240;seqid=Merlin -Merlin GeneMark.hmm mRNA 131569 131781 . + . ID=Merlin_240_mRNA;Parent=Merlin_240;seqid=Merlin -Merlin GeneMark.hmm exon 131569 131781 . + . ID=Merlin_240_exon;Parent=Merlin_240_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 131569 131781 . + 0 ID=Merlin_240_CDS;Parent=Merlin_240_exon;seqid=Merlin -Merlin GeneMark.hmm gene 131778 132191 -541.018164 + . ID=Merlin_241;seqid=Merlin -Merlin GeneMark.hmm mRNA 131778 132191 . + . ID=Merlin_241_mRNA;Parent=Merlin_241;seqid=Merlin -Merlin GeneMark.hmm exon 131778 132191 . + . ID=Merlin_241_exon;Parent=Merlin_241_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 131778 132191 . + 0 ID=Merlin_241_CDS;Parent=Merlin_241_exon;seqid=Merlin -Merlin GeneMark.hmm gene 132199 132585 -491.258919 + . ID=Merlin_242;seqid=Merlin -Merlin GeneMark.hmm mRNA 132199 132585 . + . ID=Merlin_242_mRNA;Parent=Merlin_242;seqid=Merlin -Merlin GeneMark.hmm exon 132199 132585 . + . ID=Merlin_242_exon;Parent=Merlin_242_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 132199 132585 . + 0 ID=Merlin_242_CDS;Parent=Merlin_242_exon;seqid=Merlin -Merlin GeneMark.hmm gene 132575 132847 -349.509326 + . ID=Merlin_243;seqid=Merlin -Merlin GeneMark.hmm mRNA 132575 132847 . + . ID=Merlin_243_mRNA;Parent=Merlin_243;seqid=Merlin -Merlin GeneMark.hmm exon 132575 132847 . + . ID=Merlin_243_exon;Parent=Merlin_243_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 132575 132847 . + 0 ID=Merlin_243_CDS;Parent=Merlin_243_exon;seqid=Merlin -Merlin GeneMark.hmm gene 132910 133182 -334.452325 + . ID=Merlin_244;seqid=Merlin -Merlin GeneMark.hmm mRNA 132910 133182 . + . ID=Merlin_244_mRNA;Parent=Merlin_244;seqid=Merlin -Merlin GeneMark.hmm exon 132910 133182 . + . ID=Merlin_244_exon;Parent=Merlin_244_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 132910 133182 . + 0 ID=Merlin_244_CDS;Parent=Merlin_244_exon;seqid=Merlin -Merlin GeneMark.hmm gene 133179 133835 -859.997228 - . ID=Merlin_245;seqid=Merlin -Merlin GeneMark.hmm mRNA 133179 133835 . - . ID=Merlin_245_mRNA;Parent=Merlin_245;seqid=Merlin -Merlin GeneMark.hmm exon 133179 133835 . - . ID=Merlin_245_exon;Parent=Merlin_245_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 133179 133835 . - 0 ID=Merlin_245_CDS;Parent=Merlin_245_exon;seqid=Merlin -Merlin GeneMark.hmm gene 133857 134663 -1049.900868 - . ID=Merlin_246;seqid=Merlin -Merlin GeneMark.hmm mRNA 133857 134663 . - . ID=Merlin_246_mRNA;Parent=Merlin_246;seqid=Merlin -Merlin GeneMark.hmm exon 133857 134663 . - . ID=Merlin_246_exon;Parent=Merlin_246_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 133857 134663 . - 0 ID=Merlin_246_CDS;Parent=Merlin_246_exon;seqid=Merlin -Merlin GeneMark.hmm gene 134693 137068 -3033.417419 - . ID=Merlin_247;seqid=Merlin -Merlin GeneMark.hmm mRNA 134693 137068 . - . ID=Merlin_247_mRNA;Parent=Merlin_247;seqid=Merlin -Merlin GeneMark.hmm exon 134693 137068 . - . ID=Merlin_247_exon;Parent=Merlin_247_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 134693 137068 . - 0 ID=Merlin_247_CDS;Parent=Merlin_247_exon;seqid=Merlin -Merlin GeneMark.hmm gene 137075 137734 -856.122084 - . ID=Merlin_248;seqid=Merlin -Merlin GeneMark.hmm mRNA 137075 137734 . - . ID=Merlin_248_mRNA;Parent=Merlin_248;seqid=Merlin -Merlin GeneMark.hmm exon 137075 137734 . - . ID=Merlin_248_exon;Parent=Merlin_248_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 137075 137734 . - 0 ID=Merlin_248_CDS;Parent=Merlin_248_exon;seqid=Merlin -Merlin GeneMark.hmm gene 137787 138962 -1500.330086 - . ID=Merlin_249;seqid=Merlin -Merlin GeneMark.hmm mRNA 137787 138962 . - . ID=Merlin_249_mRNA;Parent=Merlin_249;seqid=Merlin -Merlin GeneMark.hmm exon 137787 138962 . - . ID=Merlin_249_exon;Parent=Merlin_249_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 137787 138962 . - 0 ID=Merlin_249_CDS;Parent=Merlin_249_exon;seqid=Merlin -Merlin GeneMark.hmm gene 138962 142759 -4791.853068 - . ID=Merlin_250;seqid=Merlin -Merlin GeneMark.hmm mRNA 138962 142759 . - . ID=Merlin_250_mRNA;Parent=Merlin_250;seqid=Merlin -Merlin GeneMark.hmm exon 138962 142759 . - . ID=Merlin_250_exon;Parent=Merlin_250_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 138962 142759 . - 0 ID=Merlin_250_CDS;Parent=Merlin_250_exon;seqid=Merlin -Merlin GeneMark.hmm gene 142827 143753 -1151.813807 + . ID=Merlin_251;seqid=Merlin -Merlin GeneMark.hmm mRNA 142827 143753 . + . ID=Merlin_251_mRNA;Parent=Merlin_251;seqid=Merlin -Merlin GeneMark.hmm exon 142827 143753 . + . ID=Merlin_251_exon;Parent=Merlin_251_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 142827 143753 . + 0 ID=Merlin_251_CDS;Parent=Merlin_251_exon;seqid=Merlin -Merlin GeneMark.hmm gene 143743 144030 -331.847936 + . ID=Merlin_252;seqid=Merlin -Merlin GeneMark.hmm mRNA 143743 144030 . + . ID=Merlin_252_mRNA;Parent=Merlin_252;seqid=Merlin -Merlin GeneMark.hmm exon 143743 144030 . + . ID=Merlin_252_exon;Parent=Merlin_252_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 143743 144030 . + 0 ID=Merlin_252_CDS;Parent=Merlin_252_exon;seqid=Merlin -Merlin GeneMark.hmm gene 144008 144304 -369.866491 + . ID=Merlin_253;seqid=Merlin -Merlin GeneMark.hmm mRNA 144008 144304 . + . ID=Merlin_253_mRNA;Parent=Merlin_253;seqid=Merlin -Merlin GeneMark.hmm exon 144008 144304 . + . ID=Merlin_253_exon;Parent=Merlin_253_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 144008 144304 . + 0 ID=Merlin_253_CDS;Parent=Merlin_253_exon;seqid=Merlin -Merlin GeneMark.hmm gene 144301 144954 -836.139828 + . ID=Merlin_254;seqid=Merlin -Merlin GeneMark.hmm mRNA 144301 144954 . + . ID=Merlin_254_mRNA;Parent=Merlin_254;seqid=Merlin -Merlin GeneMark.hmm exon 144301 144954 . + . ID=Merlin_254_exon;Parent=Merlin_254_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 144301 144954 . + 0 ID=Merlin_254_CDS;Parent=Merlin_254_exon;seqid=Merlin -Merlin GeneMark.hmm gene 144964 145875 -1124.370545 + . ID=Merlin_255;seqid=Merlin -Merlin GeneMark.hmm mRNA 144964 145875 . + . ID=Merlin_255_mRNA;Parent=Merlin_255;seqid=Merlin -Merlin GeneMark.hmm exon 144964 145875 . + . ID=Merlin_255_exon;Parent=Merlin_255_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 144964 145875 . + 0 ID=Merlin_255_CDS;Parent=Merlin_255_exon;seqid=Merlin -Merlin GeneMark.hmm gene 145979 146218 -290.192159 + . ID=Merlin_256;seqid=Merlin -Merlin GeneMark.hmm mRNA 145979 146218 . + . ID=Merlin_256_mRNA;Parent=Merlin_256;seqid=Merlin -Merlin GeneMark.hmm exon 145979 146218 . + . ID=Merlin_256_exon;Parent=Merlin_256_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 145979 146218 . + 0 ID=Merlin_256_CDS;Parent=Merlin_256_exon;seqid=Merlin -Merlin GeneMark.hmm gene 146253 146519 -322.908748 + . ID=Merlin_257;seqid=Merlin -Merlin GeneMark.hmm mRNA 146253 146519 . + . ID=Merlin_257_mRNA;Parent=Merlin_257;seqid=Merlin -Merlin GeneMark.hmm exon 146253 146519 . + . ID=Merlin_257_exon;Parent=Merlin_257_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 146253 146519 . + 0 ID=Merlin_257_CDS;Parent=Merlin_257_exon;seqid=Merlin -Merlin GeneMark.hmm gene 146520 146744 -274.376507 + . ID=Merlin_258;seqid=Merlin -Merlin GeneMark.hmm mRNA 146520 146744 . + . ID=Merlin_258_mRNA;Parent=Merlin_258;seqid=Merlin -Merlin GeneMark.hmm exon 146520 146744 . + . ID=Merlin_258_exon;Parent=Merlin_258_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 146520 146744 . + 0 ID=Merlin_258_CDS;Parent=Merlin_258_exon;seqid=Merlin -Merlin GeneMark.hmm gene 146825 147040 -255.288456 + . ID=Merlin_259;seqid=Merlin -Merlin GeneMark.hmm mRNA 146825 147040 . + . ID=Merlin_259_mRNA;Parent=Merlin_259;seqid=Merlin -Merlin GeneMark.hmm exon 146825 147040 . + . ID=Merlin_259_exon;Parent=Merlin_259_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 146825 147040 . + 0 ID=Merlin_259_CDS;Parent=Merlin_259_exon;seqid=Merlin -Merlin GeneMark.hmm gene 147054 147419 -449.354834 + . ID=Merlin_260;seqid=Merlin -Merlin GeneMark.hmm mRNA 147054 147419 . + . ID=Merlin_260_mRNA;Parent=Merlin_260;seqid=Merlin -Merlin GeneMark.hmm exon 147054 147419 . + . ID=Merlin_260_exon;Parent=Merlin_260_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 147054 147419 . + 0 ID=Merlin_260_CDS;Parent=Merlin_260_exon;seqid=Merlin -Merlin GeneMark.hmm gene 147477 147755 -346.840279 + . ID=Merlin_261;seqid=Merlin -Merlin GeneMark.hmm mRNA 147477 147755 . + . ID=Merlin_261_mRNA;Parent=Merlin_261;seqid=Merlin -Merlin GeneMark.hmm exon 147477 147755 . + . ID=Merlin_261_exon;Parent=Merlin_261_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 147477 147755 . + 0 ID=Merlin_261_CDS;Parent=Merlin_261_exon;seqid=Merlin -Merlin GeneMark.hmm gene 147755 148078 -405.900125 + . ID=Merlin_262;seqid=Merlin -Merlin GeneMark.hmm mRNA 147755 148078 . + . ID=Merlin_262_mRNA;Parent=Merlin_262;seqid=Merlin -Merlin GeneMark.hmm exon 147755 148078 . + . ID=Merlin_262_exon;Parent=Merlin_262_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 147755 148078 . + 0 ID=Merlin_262_CDS;Parent=Merlin_262_exon;seqid=Merlin -Merlin GeneMark.hmm gene 148078 148293 -271.597843 + . ID=Merlin_263;seqid=Merlin -Merlin GeneMark.hmm mRNA 148078 148293 . + . ID=Merlin_263_mRNA;Parent=Merlin_263;seqid=Merlin -Merlin GeneMark.hmm exon 148078 148293 . + . ID=Merlin_263_exon;Parent=Merlin_263_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 148078 148293 . + 0 ID=Merlin_263_CDS;Parent=Merlin_263_exon;seqid=Merlin -Merlin GeneMark.hmm gene 148385 148636 -312.527190 + . ID=Merlin_264;seqid=Merlin -Merlin GeneMark.hmm mRNA 148385 148636 . + . ID=Merlin_264_mRNA;Parent=Merlin_264;seqid=Merlin -Merlin GeneMark.hmm exon 148385 148636 . + . ID=Merlin_264_exon;Parent=Merlin_264_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 148385 148636 . + 0 ID=Merlin_264_CDS;Parent=Merlin_264_exon;seqid=Merlin -Merlin GeneMark.hmm gene 148636 149229 -751.963856 + . ID=Merlin_265;seqid=Merlin -Merlin GeneMark.hmm mRNA 148636 149229 . + . ID=Merlin_265_mRNA;Parent=Merlin_265;seqid=Merlin -Merlin GeneMark.hmm exon 148636 149229 . + . ID=Merlin_265_exon;Parent=Merlin_265_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 148636 149229 . + 0 ID=Merlin_265_CDS;Parent=Merlin_265_exon;seqid=Merlin -Merlin GeneMark.hmm gene 149226 149555 -411.956487 + . ID=Merlin_266;seqid=Merlin -Merlin GeneMark.hmm mRNA 149226 149555 . + . ID=Merlin_266_mRNA;Parent=Merlin_266;seqid=Merlin -Merlin GeneMark.hmm exon 149226 149555 . + . ID=Merlin_266_exon;Parent=Merlin_266_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 149226 149555 . + 0 ID=Merlin_266_CDS;Parent=Merlin_266_exon;seqid=Merlin -Merlin GeneMark.hmm gene 149533 149880 -436.887846 + . ID=Merlin_267;seqid=Merlin -Merlin GeneMark.hmm mRNA 149533 149880 . + . ID=Merlin_267_mRNA;Parent=Merlin_267;seqid=Merlin -Merlin GeneMark.hmm exon 149533 149880 . + . ID=Merlin_267_exon;Parent=Merlin_267_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 149533 149880 . + 0 ID=Merlin_267_CDS;Parent=Merlin_267_exon;seqid=Merlin -Merlin GeneMark.hmm gene 149877 150737 -1096.070881 + . ID=Merlin_268;seqid=Merlin -Merlin GeneMark.hmm mRNA 149877 150737 . + . ID=Merlin_268_mRNA;Parent=Merlin_268;seqid=Merlin -Merlin GeneMark.hmm exon 149877 150737 . + . ID=Merlin_268_exon;Parent=Merlin_268_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 149877 150737 . + 0 ID=Merlin_268_CDS;Parent=Merlin_268_exon;seqid=Merlin -Merlin GeneMark.hmm gene 150734 150925 -235.875923 + . ID=Merlin_269;seqid=Merlin -Merlin GeneMark.hmm mRNA 150734 150925 . + . ID=Merlin_269_mRNA;Parent=Merlin_269;seqid=Merlin -Merlin GeneMark.hmm exon 150734 150925 . + . ID=Merlin_269_exon;Parent=Merlin_269_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 150734 150925 . + 0 ID=Merlin_269_CDS;Parent=Merlin_269_exon;seqid=Merlin -Merlin GeneMark.hmm gene 150922 151227 -402.602546 + . ID=Merlin_270;seqid=Merlin -Merlin GeneMark.hmm mRNA 150922 151227 . + . ID=Merlin_270_mRNA;Parent=Merlin_270;seqid=Merlin -Merlin GeneMark.hmm exon 150922 151227 . + . ID=Merlin_270_exon;Parent=Merlin_270_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 150922 151227 . + 0 ID=Merlin_270_CDS;Parent=Merlin_270_exon;seqid=Merlin -Merlin GeneMark.hmm gene 151218 153473 -2890.442885 + . ID=Merlin_271;seqid=Merlin -Merlin GeneMark.hmm mRNA 151218 153473 . + . ID=Merlin_271_mRNA;Parent=Merlin_271;seqid=Merlin -Merlin GeneMark.hmm exon 151218 153473 . + . ID=Merlin_271_exon;Parent=Merlin_271_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 151218 153473 . + 0 ID=Merlin_271_CDS;Parent=Merlin_271_exon;seqid=Merlin -Merlin GeneMark.hmm gene 153580 154722 -1440.286123 + . ID=Merlin_272;seqid=Merlin -Merlin GeneMark.hmm mRNA 153580 154722 . + . ID=Merlin_272_mRNA;Parent=Merlin_272;seqid=Merlin -Merlin GeneMark.hmm exon 153580 154722 . + . ID=Merlin_272_exon;Parent=Merlin_272_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 153580 154722 . + 0 ID=Merlin_272_CDS;Parent=Merlin_272_exon;seqid=Merlin -Merlin GeneMark.hmm gene 154749 155165 -537.328485 + . ID=Merlin_273;seqid=Merlin -Merlin GeneMark.hmm mRNA 154749 155165 . + . ID=Merlin_273_mRNA;Parent=Merlin_273;seqid=Merlin -Merlin GeneMark.hmm exon 154749 155165 . + . ID=Merlin_273_exon;Parent=Merlin_273_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 154749 155165 . + 0 ID=Merlin_273_CDS;Parent=Merlin_273_exon;seqid=Merlin -Merlin GeneMark.hmm gene 155162 155392 -284.548380 + . ID=Merlin_274;seqid=Merlin -Merlin GeneMark.hmm mRNA 155162 155392 . + . ID=Merlin_274_mRNA;Parent=Merlin_274;seqid=Merlin -Merlin GeneMark.hmm exon 155162 155392 . + . ID=Merlin_274_exon;Parent=Merlin_274_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 155162 155392 . + 0 ID=Merlin_274_CDS;Parent=Merlin_274_exon;seqid=Merlin -Merlin GeneMark.hmm gene 155392 156522 -1423.600588 + . ID=Merlin_275;seqid=Merlin -Merlin GeneMark.hmm mRNA 155392 156522 . + . ID=Merlin_275_mRNA;Parent=Merlin_275;seqid=Merlin -Merlin GeneMark.hmm exon 155392 156522 . + . ID=Merlin_275_exon;Parent=Merlin_275_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 155392 156522 . + 0 ID=Merlin_275_CDS;Parent=Merlin_275_exon;seqid=Merlin -Merlin GeneMark.hmm gene 156585 157088 -632.566444 + . ID=Merlin_276;seqid=Merlin -Merlin GeneMark.hmm mRNA 156585 157088 . + . ID=Merlin_276_mRNA;Parent=Merlin_276;seqid=Merlin -Merlin GeneMark.hmm exon 156585 157088 . + . ID=Merlin_276_exon;Parent=Merlin_276_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 156585 157088 . + 0 ID=Merlin_276_CDS;Parent=Merlin_276_exon;seqid=Merlin -Merlin GeneMark.hmm gene 157076 157432 -439.709209 + . ID=Merlin_277;seqid=Merlin -Merlin GeneMark.hmm mRNA 157076 157432 . + . ID=Merlin_277_mRNA;Parent=Merlin_277;seqid=Merlin -Merlin GeneMark.hmm exon 157076 157432 . + . ID=Merlin_277_exon;Parent=Merlin_277_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 157076 157432 . + 0 ID=Merlin_277_CDS;Parent=Merlin_277_exon;seqid=Merlin -Merlin GeneMark.hmm gene 157429 157734 -403.460144 + . ID=Merlin_278;seqid=Merlin -Merlin GeneMark.hmm mRNA 157429 157734 . + . ID=Merlin_278_mRNA;Parent=Merlin_278;seqid=Merlin -Merlin GeneMark.hmm exon 157429 157734 . + . ID=Merlin_278_exon;Parent=Merlin_278_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 157429 157734 . + 0 ID=Merlin_278_CDS;Parent=Merlin_278_exon;seqid=Merlin -Merlin GeneMark.hmm gene 157836 158312 -603.091441 + . ID=Merlin_279;seqid=Merlin -Merlin GeneMark.hmm mRNA 157836 158312 . + . ID=Merlin_279_mRNA;Parent=Merlin_279;seqid=Merlin -Merlin GeneMark.hmm exon 157836 158312 . + . ID=Merlin_279_exon;Parent=Merlin_279_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 157836 158312 . + 0 ID=Merlin_279_CDS;Parent=Merlin_279_exon;seqid=Merlin -Merlin GeneMark.hmm gene 158309 158668 -447.203441 + . ID=Merlin_280;seqid=Merlin -Merlin GeneMark.hmm mRNA 158309 158668 . + . ID=Merlin_280_mRNA;Parent=Merlin_280;seqid=Merlin -Merlin GeneMark.hmm exon 158309 158668 . + . ID=Merlin_280_exon;Parent=Merlin_280_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 158309 158668 . + 0 ID=Merlin_280_CDS;Parent=Merlin_280_exon;seqid=Merlin -Merlin GeneMark.hmm gene 158665 158838 -212.409539 + . ID=Merlin_281;seqid=Merlin -Merlin GeneMark.hmm mRNA 158665 158838 . + . ID=Merlin_281_mRNA;Parent=Merlin_281;seqid=Merlin -Merlin GeneMark.hmm exon 158665 158838 . + . ID=Merlin_281_exon;Parent=Merlin_281_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 158665 158838 . + 0 ID=Merlin_281_CDS;Parent=Merlin_281_exon;seqid=Merlin -Merlin GeneMark.hmm gene 158835 159731 -1132.126395 + . ID=Merlin_282;seqid=Merlin -Merlin GeneMark.hmm mRNA 158835 159731 . + . ID=Merlin_282_mRNA;Parent=Merlin_282;seqid=Merlin -Merlin GeneMark.hmm exon 158835 159731 . + . ID=Merlin_282_exon;Parent=Merlin_282_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 158835 159731 . + 0 ID=Merlin_282_CDS;Parent=Merlin_282_exon;seqid=Merlin -Merlin GeneMark.hmm gene 159731 159922 -235.781764 + . ID=Merlin_283;seqid=Merlin -Merlin GeneMark.hmm mRNA 159731 159922 . + . ID=Merlin_283_mRNA;Parent=Merlin_283;seqid=Merlin -Merlin GeneMark.hmm exon 159731 159922 . + . ID=Merlin_283_exon;Parent=Merlin_283_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 159731 159922 . + 0 ID=Merlin_283_CDS;Parent=Merlin_283_exon;seqid=Merlin -Merlin GeneMark.hmm gene 159922 160137 -267.519915 + . ID=Merlin_284;seqid=Merlin -Merlin GeneMark.hmm mRNA 159922 160137 . + . ID=Merlin_284_mRNA;Parent=Merlin_284;seqid=Merlin -Merlin GeneMark.hmm exon 159922 160137 . + . ID=Merlin_284_exon;Parent=Merlin_284_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 159922 160137 . + 0 ID=Merlin_284_CDS;Parent=Merlin_284_exon;seqid=Merlin -Merlin GeneMark.hmm gene 160137 160436 -372.267833 + . ID=Merlin_285;seqid=Merlin -Merlin GeneMark.hmm mRNA 160137 160436 . + . ID=Merlin_285_mRNA;Parent=Merlin_285;seqid=Merlin -Merlin GeneMark.hmm exon 160137 160436 . + . ID=Merlin_285_exon;Parent=Merlin_285_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 160137 160436 . + 0 ID=Merlin_285_CDS;Parent=Merlin_285_exon;seqid=Merlin -Merlin GeneMark.hmm gene 160414 160641 -289.957825 + . ID=Merlin_286;seqid=Merlin -Merlin GeneMark.hmm mRNA 160414 160641 . + . ID=Merlin_286_mRNA;Parent=Merlin_286;seqid=Merlin -Merlin GeneMark.hmm exon 160414 160641 . + . ID=Merlin_286_exon;Parent=Merlin_286_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 160414 160641 . + 0 ID=Merlin_286_CDS;Parent=Merlin_286_exon;seqid=Merlin -Merlin GeneMark.hmm gene 160638 160985 -435.855402 + . ID=Merlin_287;seqid=Merlin -Merlin GeneMark.hmm mRNA 160638 160985 . + . ID=Merlin_287_mRNA;Parent=Merlin_287;seqid=Merlin -Merlin GeneMark.hmm exon 160638 160985 . + . ID=Merlin_287_exon;Parent=Merlin_287_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 160638 160985 . + 0 ID=Merlin_287_CDS;Parent=Merlin_287_exon;seqid=Merlin -Merlin GeneMark.hmm gene 160986 161549 -716.263909 + . ID=Merlin_288;seqid=Merlin -Merlin GeneMark.hmm mRNA 160986 161549 . + . ID=Merlin_288_mRNA;Parent=Merlin_288;seqid=Merlin -Merlin GeneMark.hmm exon 160986 161549 . + . ID=Merlin_288_exon;Parent=Merlin_288_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 160986 161549 . + 0 ID=Merlin_288_CDS;Parent=Merlin_288_exon;seqid=Merlin -Merlin GeneMark.hmm gene 161546 161848 -371.966910 + . ID=Merlin_289;seqid=Merlin -Merlin GeneMark.hmm mRNA 161546 161848 . + . ID=Merlin_289_mRNA;Parent=Merlin_289;seqid=Merlin -Merlin GeneMark.hmm exon 161546 161848 . + . ID=Merlin_289_exon;Parent=Merlin_289_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 161546 161848 . + 0 ID=Merlin_289_CDS;Parent=Merlin_289_exon;seqid=Merlin -Merlin GeneMark.hmm gene 161845 162081 -287.849916 + . ID=Merlin_290;seqid=Merlin -Merlin GeneMark.hmm mRNA 161845 162081 . + . ID=Merlin_290_mRNA;Parent=Merlin_290;seqid=Merlin -Merlin GeneMark.hmm exon 161845 162081 . + . ID=Merlin_290_exon;Parent=Merlin_290_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 161845 162081 . + 0 ID=Merlin_290_CDS;Parent=Merlin_290_exon;seqid=Merlin -Merlin GeneMark.hmm gene 162074 162391 -387.962641 + . ID=Merlin_291;seqid=Merlin -Merlin GeneMark.hmm mRNA 162074 162391 . + . ID=Merlin_291_mRNA;Parent=Merlin_291;seqid=Merlin -Merlin GeneMark.hmm exon 162074 162391 . + . ID=Merlin_291_exon;Parent=Merlin_291_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 162074 162391 . + 0 ID=Merlin_291_CDS;Parent=Merlin_291_exon;seqid=Merlin -Merlin GeneMark.hmm gene 162449 162775 -406.965469 + . ID=Merlin_292;seqid=Merlin -Merlin GeneMark.hmm mRNA 162449 162775 . + . ID=Merlin_292_mRNA;Parent=Merlin_292;seqid=Merlin -Merlin GeneMark.hmm exon 162449 162775 . + . ID=Merlin_292_exon;Parent=Merlin_292_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 162449 162775 . + 0 ID=Merlin_292_CDS;Parent=Merlin_292_exon;seqid=Merlin -Merlin GeneMark.hmm gene 162905 163159 -321.120824 + . ID=Merlin_293;seqid=Merlin -Merlin GeneMark.hmm mRNA 162905 163159 . + . ID=Merlin_293_mRNA;Parent=Merlin_293;seqid=Merlin -Merlin GeneMark.hmm exon 162905 163159 . + . ID=Merlin_293_exon;Parent=Merlin_293_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 162905 163159 . + 0 ID=Merlin_293_CDS;Parent=Merlin_293_exon;seqid=Merlin -Merlin GeneMark.hmm gene 163465 163644 -217.336356 + . ID=Merlin_294;seqid=Merlin -Merlin GeneMark.hmm mRNA 163465 163644 . + . ID=Merlin_294_mRNA;Parent=Merlin_294;seqid=Merlin -Merlin GeneMark.hmm exon 163465 163644 . + . ID=Merlin_294_exon;Parent=Merlin_294_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 163465 163644 . + 0 ID=Merlin_294_CDS;Parent=Merlin_294_exon;seqid=Merlin -Merlin GeneMark.hmm gene 163764 164132 -441.864606 + . ID=Merlin_295;seqid=Merlin -Merlin GeneMark.hmm mRNA 163764 164132 . + . ID=Merlin_295_mRNA;Parent=Merlin_295;seqid=Merlin -Merlin GeneMark.hmm exon 163764 164132 . + . ID=Merlin_295_exon;Parent=Merlin_295_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 163764 164132 . + 0 ID=Merlin_295_CDS;Parent=Merlin_295_exon;seqid=Merlin -Merlin GeneMark.hmm gene 164158 164646 -602.734029 + . ID=Merlin_296;seqid=Merlin -Merlin GeneMark.hmm mRNA 164158 164646 . + . ID=Merlin_296_mRNA;Parent=Merlin_296;seqid=Merlin -Merlin GeneMark.hmm exon 164158 164646 . + . ID=Merlin_296_exon;Parent=Merlin_296_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 164158 164646 . + 0 ID=Merlin_296_CDS;Parent=Merlin_296_exon;seqid=Merlin -Merlin GeneMark.hmm gene 164715 165071 -451.064481 + . ID=Merlin_297;seqid=Merlin -Merlin GeneMark.hmm mRNA 164715 165071 . + . ID=Merlin_297_mRNA;Parent=Merlin_297;seqid=Merlin -Merlin GeneMark.hmm exon 164715 165071 . + . ID=Merlin_297_exon;Parent=Merlin_297_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 164715 165071 . + 0 ID=Merlin_297_CDS;Parent=Merlin_297_exon;seqid=Merlin -Merlin GeneMark.hmm gene 165107 165601 -618.360781 + . ID=Merlin_298;seqid=Merlin -Merlin GeneMark.hmm mRNA 165107 165601 . + . ID=Merlin_298_mRNA;Parent=Merlin_298;seqid=Merlin -Merlin GeneMark.hmm exon 165107 165601 . + . ID=Merlin_298_exon;Parent=Merlin_298_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 165107 165601 . + 0 ID=Merlin_298_CDS;Parent=Merlin_298_exon;seqid=Merlin -Merlin GeneMark.hmm gene 165612 165773 -191.091430 + . ID=Merlin_299;seqid=Merlin -Merlin GeneMark.hmm mRNA 165612 165773 . + . ID=Merlin_299_mRNA;Parent=Merlin_299;seqid=Merlin -Merlin GeneMark.hmm exon 165612 165773 . + . ID=Merlin_299_exon;Parent=Merlin_299_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 165612 165773 . + 0 ID=Merlin_299_CDS;Parent=Merlin_299_exon;seqid=Merlin -Merlin GeneMark.hmm gene 165770 166000 -285.030914 + . ID=Merlin_300;seqid=Merlin -Merlin GeneMark.hmm mRNA 165770 166000 . + . ID=Merlin_300_mRNA;Parent=Merlin_300;seqid=Merlin -Merlin GeneMark.hmm exon 165770 166000 . + . ID=Merlin_300_exon;Parent=Merlin_300_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 165770 166000 . + 0 ID=Merlin_300_CDS;Parent=Merlin_300_exon;seqid=Merlin -Merlin GeneMark.hmm gene 165997 166191 -241.609251 + . ID=Merlin_301;seqid=Merlin -Merlin GeneMark.hmm mRNA 165997 166191 . + . ID=Merlin_301_mRNA;Parent=Merlin_301;seqid=Merlin -Merlin GeneMark.hmm exon 165997 166191 . + . ID=Merlin_301_exon;Parent=Merlin_301_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 165997 166191 . + 0 ID=Merlin_301_CDS;Parent=Merlin_301_exon;seqid=Merlin -Merlin GeneMark.hmm gene 166352 167200 -1091.167753 + . ID=Merlin_302;seqid=Merlin -Merlin GeneMark.hmm mRNA 166352 167200 . + . ID=Merlin_302_mRNA;Parent=Merlin_302;seqid=Merlin -Merlin GeneMark.hmm exon 166352 167200 . + . ID=Merlin_302_exon;Parent=Merlin_302_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 166352 167200 . + 0 ID=Merlin_302_CDS;Parent=Merlin_302_exon;seqid=Merlin -Merlin GeneMark.hmm gene 167197 167433 -294.645060 + . ID=Merlin_303;seqid=Merlin -Merlin GeneMark.hmm mRNA 167197 167433 . + . ID=Merlin_303_mRNA;Parent=Merlin_303;seqid=Merlin -Merlin GeneMark.hmm exon 167197 167433 . + . ID=Merlin_303_exon;Parent=Merlin_303_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 167197 167433 . + 0 ID=Merlin_303_CDS;Parent=Merlin_303_exon;seqid=Merlin -Merlin GeneMark.hmm gene 167487 168944 -1811.170385 + . ID=Merlin_304;seqid=Merlin -Merlin GeneMark.hmm mRNA 167487 168944 . + . ID=Merlin_304_mRNA;Parent=Merlin_304;seqid=Merlin -Merlin GeneMark.hmm exon 167487 168944 . + . ID=Merlin_304_exon;Parent=Merlin_304_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 167487 168944 . + 0 ID=Merlin_304_CDS;Parent=Merlin_304_exon;seqid=Merlin -Merlin GeneMark.hmm gene 168941 169120 -220.159549 + . ID=Merlin_305;seqid=Merlin -Merlin GeneMark.hmm mRNA 168941 169120 . + . ID=Merlin_305_mRNA;Parent=Merlin_305;seqid=Merlin -Merlin GeneMark.hmm exon 168941 169120 . + . ID=Merlin_305_exon;Parent=Merlin_305_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 168941 169120 . + 0 ID=Merlin_305_CDS;Parent=Merlin_305_exon;seqid=Merlin -Merlin GeneMark.hmm gene 169175 171265 -2617.092758 + . ID=Merlin_306;seqid=Merlin -Merlin GeneMark.hmm mRNA 169175 171265 . + . ID=Merlin_306_mRNA;Parent=Merlin_306;seqid=Merlin -Merlin GeneMark.hmm exon 169175 171265 . + . ID=Merlin_306_exon;Parent=Merlin_306_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 169175 171265 . + 0 ID=Merlin_306_CDS;Parent=Merlin_306_exon;seqid=Merlin -Merlin GeneMark.hmm gene 171301 172788 -1876.322043 + . ID=Merlin_307;seqid=Merlin -Merlin GeneMark.hmm mRNA 171301 172788 . + . ID=Merlin_307_mRNA;Parent=Merlin_307;seqid=Merlin -Merlin GeneMark.hmm exon 171301 172788 . + . ID=Merlin_307_exon;Parent=Merlin_307_mRNA;seqid=Merlin -Merlin GeneMark.hmm CDS 171301 172788 . + 0 ID=Merlin_307_CDS;Parent=Merlin_307_exon;seqid=Merlin +Merlin GeneMark.hmm gene 10 30 . + . ID=Merlin_1;seqid=Merlin +Merlin GeneMark.hmm mRNA 14 30 . + . ID=Merlin_1_mRNA;Parent=Merlin_1 +Merlin GeneMark.hmm CDS 14 20 1000 + 0 ID=Merlin_1_CDS ;Parent=Merlin_1_mRNA +Merlin GeneMark.hmm CDS 24 30 500 + 0 ID=Merlin_1_CDS ;Parent=Merlin_1_mRNA +Merlin GeneMark.hmm gene 14 30 . + . ID=Merlin_2;seqid=Merlin;color=#00ff00 +Merlin GeneMark.hmm mRNA 14 30 . + . ID=Merlin_2_mRNA;seqid=Merlin;color=#00ff00;Parent=Merlin_2 +Merlin GeneMark.hmm CDS 14 20 500 + 0 ID=Merlin_2_CDS ;Parent=Merlin_2_mRNA;color=#0000ff +Merlin GeneMark.hmm CDS 24 30 750 + 0 ID=Merlin_2_CDS ;Parent=Merlin_2_mRNA;color=#00ff00 +Merlin GeneMark.hmm gene 10 30 . + . ID=Merlin_3;seqid=Merlin +Merlin GeneMark.hmm mRNA 14 30 . + . ID=Merlin_3A_mRNA;Parent=Merlin_3;color=#0000ff +Merlin GeneMark.hmm CDS 14 18 1000 + 0 ID=Merlin_3A_CDS ;Parent=Merlin_3A_mRNA;color=#0000ff +Merlin GeneMark.hmm CDS 20 30 800 + 0 ID=Merlin_3A_CDS ;Parent=Merlin_3A_mRNA;color=#0000ff +Merlin GeneMark.hmm mRNA 14 30 . + . ID=Merlin_3B_mRNA;Parent=Merlin_3;color=#0000ff +Merlin GeneMark.hmm CDS 14 22 400 + 0 ID=Merlin_3B_CDS ;Parent=Merlin_3B_mRNA;color=#0000ff +Merlin GeneMark.hmm CDS 24 30 1000 + 0 ID=Merlin_3B_CDS ;Parent=Merlin_3B_mRNA;color=#0000ff +Merlin exonerate gene 1740 2300 . + . Name=Apple3;Note=Gene with two splicing models;ID=1 +Merlin exonerate mRNA 1740 2300 . + . Name=Apple3-a;Note=mRNA A with both CDSs and UTRs;ID=1A;Parent=1; +Merlin exonerate UTR 1740 1799 . + . Parent=1A +Merlin exonerate CDS 1900 2080 . + 0 Parent=1A +Merlin exonerate CDS 2100 2120 . + 2 Parent=1A +Merlin exonerate UTR 2120 2300 . + . Parent=1A +Merlin exonerate mRNA 1740 2300 . + . Name=Apple3-b;Note=mRNA B with both CDSs and UTRs;ID=1B;Parent=1; +Merlin exonerate UTR 1740 1799 . + . Parent=1B +Merlin exonerate CDS 1800 1880 . + 0 Parent=1B +Merlin exonerate CDS 1900 1950 . + 1 Parent=1B +Merlin exonerate CDS 2100 2120 . + 2 Parent=1B +Merlin exonerate UTR 2120 2300 . + . Parent=1B +# { +# "baseUrl": "http://localhost:8000/out/data/" +# "compress": 0, +# "label": "Transcript", +# "storeClass": "JBrowse/Store/SeqFeature/NCList", +# "trackType": "JBrowse/View/Track/CanvasFeatures", +# "type": "JBrowse/View/Track/CanvasFeatures", +# "urlTemplate": "tracks/42ff9cb16c0509f0abb4a76ce14077bc_0/{refseq}/trackData.json", +# }
--- a/test-data/vcf/merlin.vcf Fri Mar 01 05:15:41 2024 +0000 +++ b/test-data/vcf/merlin.vcf Mon Mar 04 09:47:19 2024 +0000 @@ -3,21 +3,21 @@ ##source=myImputationProgramV3.1 ##reference=1000GenomesPilot-NCBI36 ##phasing=partial -##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data"> -##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> -##INFO=<ID=AF,Number=.,Type=Float,Description="Allele Frequency"> -##INFO=<ID=AA,Number=1,Type=String,Description="Ancestral Allele"> -##INFO=<ID=DB,Number=0,Type=Flag,Description="dbSNP membership, build 129"> -##INFO=<ID=H2,Number=0,Type=Flag,Description="HapMap2 membership"> -##FILTER=<ID=q10,Description="Quality below 10"> -##FILTER=<ID=s50,Description="Less than 50% of samples have data"> +##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data"> +##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> +##INFO=<ID=AF,Number=.,Type=Float,Description="Allele Frequency"> +##INFO=<ID=AA,Number=1,Type=String,Description="Ancestral Allele"> +##INFO=<ID=DB,Number=0,Type=Flag,Description="dbSNP membership, build 129"> +##INFO=<ID=H2,Number=0,Type=Flag,Description="HapMap2 membership"> +##FILTER=<ID=q10,Description="Quality below 10"> +##FILTER=<ID=s50,Description="Less than 50% of samples have data"> ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> -##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> -##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> -##FORMAT=<ID=HQ,Number=2,Type=Integer,Description="Haplotype Quality"> -#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA00001 NA00002 NA00003 -Merlin 170 rs6054257 G A 29 PASS NS=3;DP=14;AF=0.5;DB;H2 GT:GQ:DP:HQ 0|0:48:1:51,51 1|0:48:8:51,51 1/1:43:5:.,. -Merlin 1020 . T A 3 q10 NS=3;DP=11;AF=0.017 GT:GQ:DP:HQ 0|0:49:3:58,50 0|1:3:5:65,3 0/0:41:3 -Merlin 3445 rs6040355 A G,T 67 PASS NS=2;DP=10;AF=0.333,0.667;AA=T;DB GT:GQ:DP:HQ 1|2:21:6:23,27 2|1:2:0:18,2 2/2:35:4 -Merlin 5050 . T . 47 PASS NS=3;DP=13;AA=T GT:GQ:DP:HQ 0|0:54:7:56,60 0|0:48:4:51,51 0/0:61:2 -Merlin 20000 microsat1 GTCT G,GTACT 50 PASS NS=3;DP=9;AA=G GT:GQ:DP 0/1:35:4 0/2:17:2 1/1:40:3 +##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> +##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> +##FORMAT=<ID=HQ,Number=2,Type=Integer,Description="Haplotype Quality"> +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA00001 NA00002 NA00003 +Merlin 170 rs6054257 G A 29 PASS NS=3;DP=14;AF=0.5;DB;H2 GT:GQ:DP:HQ 0|0:48:1:51,51 1|0:48:8:51,51 1/1:43:5:.,. +Merlin 1020 . T A 3 q10 NS=3;DP=11;AF=0.017 GT:GQ:DP:HQ 0|0:49:3:58,50 0|1:3:5:65,3 0/0:41:3 +Merlin 3445 rs6040355 A G,T 67 PASS NS=2;DP=10;AF=0.333,0.667;AA=T;DB GT:GQ:DP:HQ 1|2:21:6:23,27 2|1:2:0:18,2 2/2:35:4 +Merlin 5050 . T . 47 PASS NS=3;DP=13;AA=T GT:GQ:DP:HQ 0|0:54:7:56,60 0|0:48:4:51,51 0/0:61:2 +Merlin 20000 microsat1 GTCT G,GTACT 50 PASS NS=3;DP=9;AA=G GT:GQ:DP 0/1:35:4 0/2:17:2 1/1:40:3