Mercurial > repos > fubar > jbrowse2
changeset 114:75f01bd05bd8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 2f823945594c6e61a7661c253b671a604b8fb959
| author | bgruening |
|---|---|
| date | Tue, 20 Aug 2024 06:43:01 +0000 |
| parents | 878c27dfea9d |
| children | 4aec47f872b3 |
| files | jbrowse2.xml macros.xml |
| diffstat | 2 files changed, 5 insertions(+), 3 deletions(-) [+] |
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--- a/jbrowse2.xml Sun Jul 28 02:42:43 2024 +0000 +++ b/jbrowse2.xml Tue Aug 20 06:43:01 2024 +0000 @@ -335,7 +335,7 @@ tabix bgzip with predictable index file URI</option> </param> <when value="indexed"> - <param name="genome" type="select" optional="true" label="Select a built in reference genome or custom genome" help="If not listed, add a custom genome, use a history genome or a remote URI tabix genome"> + <param name="genome" type="select" optional="false" label="Select a built in reference genome or custom genome" help="If not listed, add a custom genome, use a history genome or a remote URI tabix genome"> <options from_data_table="all_fasta"> <filter column="2" type="sort_by"/> <validator message="No genomes are available for the selected input dataset" type="no_options"/> @@ -343,7 +343,7 @@ </param> </when> <when value="history"> - <param name="genome" type="data" format="fasta" optional="true" label="Select the reference genome"/> + <param name="genome" type="data" format="fasta" optional="false" label="Select the reference genome"/> </when> <when value="uri"> <param name="uri" type="text" label="URI pointing to tabix compressed fasta - must always be on-line" @@ -1153,6 +1153,8 @@ Many Galaxy datatypes can be turned into a track for display - in all cases, the selected reference genome must have been used to generate the data: +:: + bam bed bigwig