# HG changeset patch
# User fubar
# Date 1704430649 0
# Node ID 1e6128ccc82bb757a5f7ff41c589dc2cc739b640
# Parent  234cf4490901594711bca32a3c6430a3208a6067
Uploaded

diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/galaxyaushum.png
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diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/jbrowse2.py
--- a/jbrowse2/jbrowse2.py	Fri Jan 05 04:31:35 2024 +0000
+++ b/jbrowse2/jbrowse2.py	Fri Jan 05 04:57:29 2024 +0000
@@ -179,8 +179,9 @@
             cmd = "bgzip -i -c %s > %s && samtools faidx %s" % (
                 fapath,
                 fadest,
-                fadest,
+                fadest
             )
+            log.info("### cmd = %s" % ' '.join(cmd))
             self.subprocess_popen(cmd)
             adapter = {
                 "type": "BgzipFastaAdapter",
diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/static/images/bam.png
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diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/static/images/bigwig.png
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diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/static/images/blast.png
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diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/static/images/opacity.png
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diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/static/images/sections.png
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diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/static/images/styling.png
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diff -r 234cf4490901 -r 1e6128ccc82b jbrowse2/static/merlintracksamples.png
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