Mercurial > repos > fubar > microsatbed
diff test-data/bed_sample @ 20:410144c7b2d6 draft
planemo upload for repository https://github.com/fubar2/microsatbed commit d952bc313f408735456747c3d33e09a3170c8f59-dirty
author | fubar |
---|---|
date | Wed, 17 Jul 2024 12:08:15 +0000 |
parents | db5523378e5c |
children |
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--- a/test-data/bed_sample Wed Jul 17 07:40:00 2024 +0000 +++ b/test-data/bed_sample Wed Jul 17 12:08:15 2024 +0000 @@ -1,990 +1,990 @@ -hpat1 506 526 TTTA_5 20 -hpat1 1962 1974 CCCCAC_2 12 -hpat1 2145 2163 AAAAAC_3 18 -hpat1 3033 3048 AAAAC_3 15 -hpat1 3235 3247 TTTTTT_2 12 -hpat1 4116 4128 GGCAGG_2 12 -hpat1 4310 4325 GTTTT_3 15 -hpat1 5471 5483 TTTTTG_2 12 -hpat1 5583 5595 AGCCCC_2 12 -hpat1 7238 7250 GAAAAA_2 12 -hpat1 8172 8184 AAAAAA_2 12 -hpat1 8302 8314 GAGAGA_2 12 -hpat1 8743 8755 GGAGGT_2 12 -hpat1 8827 8845 AGAAAA_3 18 -hpat1 9494 9506 GGAGGT_2 12 -hpat1 9570 9595 AAAAC_5 25 -hpat1 11622 11634 AGGGAA_2 12 -hpat1 11650 11662 AACAAC_2 12 -hpat1 12485 12497 CCTCTG_2 12 -hpat1 13456 13468 ACCCTA_2 12 -hpat1 13470 13488 CCCTAA_3 18 -hpat1 13488 13500 CCCCAA_2 12 -hpat1 13500 13518 CCCCAG_3 18 -hpat1 13522 13546 AACCCT_4 24 -hpat1 13558 13582 CCCTAA_4 24 -hpat1 13597 13609 ACCCTA_2 12 -hpat1 13611 13635 ACCCTA_4 24 -hpat1 13640 13658 AACCCC_3 18 -hpat1 13658 13670 AACCCT_2 12 -hpat1 13690 13708 ACCCTC_3 18 -hpat1 13720 13744 AACCCC_4 24 -hpat1 13746 13758 CCCAAC_2 12 -hpat1 13766 13778 CTCACC_2 12 -hpat1 14306 14318 GGCGCA_2 12 -hpat1 14335 14347 GGCGCA_2 12 -hpat1 14383 14395 GGCGCA_2 12 -hpat1 14471 14483 GGGGGG_2 12 -hpat1 16147 16159 GAGTGG_2 12 -hpat1 16546 16558 CTGAGG_2 12 -hpat1 17029 17041 CAGGCA_2 12 -hpat1 18071 18083 GTCTGG_2 12 -hpat1 18119 18131 TCGTCC_2 12 -hpat1 18794 18806 GCAGGC_2 12 -hpat1 19206 19218 TGCTCC_2 12 -hpat1 20147 20159 GGTGGT_2 12 -hpat1 22834 22846 GGGAGG_2 12 -hpat1 22938 22950 AAGCCA_2 12 -hpat1 24657 24669 AAAAAA_2 12 -hpat1 25689 25701 ATTCAC_2 12 -hpat1 26498 26510 CCCCTG_2 12 -hpat1 29329 29341 CCTCCA_2 12 -hpat1 30088 30100 CCAGGA_2 12 -hpat1 31903 31915 GTGTGT_2 12 -hpat1 32447 32459 GGAGGT_2 12 -hpat1 32997 33009 TTTTCT_2 12 -hpat1 35193 35205 GCCCAG_2 12 -hpat1 35990 36002 CTCTCC_2 12 -hpat1 36298 36310 TCTCTG_2 12 -hpat1 36310 36338 TCTC_7 28 -hpat1 36362 36374 TCTCTC_2 12 -hpat1 37141 37153 AAAAAA_2 12 -hpat1 37228 37240 ACACAC_2 12 -hpat1 38873 38885 AAAAAA_2 12 -hpat1 39405 39417 CATGTG_2 12 -hpat1 39488 39500 TTCTAG_2 12 -hpat1 40467 40482 TCTGT_3 15 -hpat1 40502 40514 GTACCA_2 12 -hpat1 43739 43764 TCCAT_5 25 -hpat1 43806 43826 CACTC_4 20 -hpat1 43854 43869 TCCAC_3 15 -hpat1 43964 43984 TCCAC_4 20 -hpat1 44029 44044 TCCAC_3 15 -hpat1 44254 44269 TCCAC_3 15 -hpat1 44371 44386 CATTC_3 15 -hpat1 44414 44429 TCCAC_3 15 -hpat1 44789 44804 TCCAC_3 15 -hpat1 44878 44903 TTCCA_5 25 -hpat1 44919 44934 TCCAC_3 15 -hpat1 45139 45154 TCCAT_3 15 -hpat1 45259 45274 TCCAT_3 15 -hpat1 45343 45368 TCCAT_5 25 -hpat1 45368 45383 TCCAC_3 15 -hpat1 45457 45472 CTCCA_3 15 -hpat1 45525 45545 CATTC_4 20 -hpat1 45553 45573 TCCAT_4 20 -hpat1 45608 45623 TCCAC_3 15 -hpat1 45742 45757 CTCCA_3 15 -hpat1 45873 45888 TCCAT_3 15 -hpat1 45888 45903 TCCAC_3 15 -hpat1 45998 46013 TCCAC_3 15 -hpat1 46016 46031 ACTCC_3 15 -hpat1 46138 46153 TCCAC_3 15 -hpat1 46298 46313 TCCAC_3 15 -hpat1 46362 46377 TTCCA_3 15 -hpat1 46415 46430 CACTC_3 15 -hpat1 46508 46523 TCCAC_3 15 -hpat1 46837 46852 CTCCA_3 15 -hpat1 46947 46967 TCCAT_4 20 -hpat1 47041 47056 CTCCA_3 15 -hpat1 47087 47102 TCCAT_3 15 -hpat1 47106 47131 TTCCA_5 25 -hpat1 47140 47160 ATTCC_4 20 -hpat1 47160 47175 ACTCC_3 15 -hpat1 47199 47214 CACTC_3 15 -hpat1 47217 47232 TCCAC_3 15 -hpat1 47302 47322 TCCAC_4 20 -hpat1 47437 47452 TCCAC_3 15 -hpat1 47487 47502 TCCAC_3 15 -hpat1 47530 47545 ACTCC_3 15 -hpat1 47597 47612 TCCAC_3 15 -hpat1 47776 47791 TCCAT_3 15 -hpat1 47951 47966 TCCAC_3 15 -hpat1 48074 48089 ATTCC_3 15 -hpat1 48517 48532 ACTCC_3 15 -hpat1 48545 48560 CATTC_3 15 -hpat1 48639 48654 CATTC_3 15 -hpat1 48672 48692 TCCAT_4 20 -hpat1 48757 48772 TCCAT_3 15 -hpat1 48805 48825 ATTCC_4 20 -hpat1 48825 48840 ACTCC_3 15 -hpat1 48840 48855 ATTCC_3 15 -hpat1 49026 49041 CTCCA_3 15 -hpat1 49265 49280 ACTCC_3 15 -hpat1 49347 49362 TCCAC_3 15 -hpat1 49403 49418 CCACT_3 15 -hpat1 49497 49512 TCCAC_3 15 -hpat1 49522 49537 TCCAC_3 15 -hpat1 49657 49672 TCCAT_3 15 -hpat1 49680 49700 ATTCC_4 20 -hpat1 49855 49875 ATTCC_4 20 -hpat1 50100 50115 TCCAT_3 15 -hpat1 50214 50229 TCCAT_3 15 -hpat1 50231 50246 CACTC_3 15 -hpat1 50314 50334 TCCAC_4 20 -hpat1 50361 50376 CACTC_3 15 -hpat1 50434 50449 TCCAC_3 15 -hpat1 50474 50489 TCCAC_3 15 -hpat1 50734 50749 TCCAT_3 15 -hpat1 50749 50764 TCCAC_3 15 -hpat1 50774 50794 TCCAT_4 20 -hpat1 50799 50814 TCCAC_3 15 -hpat1 50834 50849 TCCAC_3 15 -hpat1 50917 50932 ATTCC_3 15 -hpat1 51009 51024 TCCAC_3 15 -hpat1 51094 51109 TCCAT_3 15 -hpat1 51152 51172 ATTCC_4 20 -hpat1 51264 51279 TCCAC_3 15 -hpat1 51280 51295 CCATT_3 15 -hpat1 51367 51382 ACTCC_3 15 -hpat1 51538 51553 TCCAT_3 15 -hpat1 51673 51688 TCCAT_3 15 -hpat1 51763 51778 TCCAC_3 15 -hpat1 51788 51803 TCCAC_3 15 -hpat1 51918 51933 TCCAC_3 15 -hpat1 52083 52098 TCCAC_3 15 -hpat1 52223 52238 TCCAT_3 15 -hpat1 52298 52313 TCCAC_3 15 -hpat1 52507 52519 GCCTTT_2 12 -hpat1 53675 53687 TTTCAG_2 12 -hpat1 55004 55016 AAAAAC_2 12 -hpat1 58745 58757 GCTTAT_2 12 -hpat1 59054 59066 TAGAAA_2 12 -hpat1 61657 61669 GGAGGT_2 12 -hpat1 61732 61747 AAA_5 15 -hpat1 62760 62775 AAA_5 15 -hpat1 65521 65533 TTTTTT_2 12 -hpat1 67691 67703 CTCAGA_2 12 -hpat1 68525 68537 TGCCTC_2 12 -hpat1 68607 68622 TTT_5 15 -hpat1 68850 68862 CAGCCT_2 12 -hpat1 69175 69187 CCTTAT_2 12 -hpat1 69631 69646 AAAAC_3 15 -hpat1 72053 72065 CTCTCC_2 12 -hpat1 73587 73599 CAAATA_2 12 -hpat1 73890 73922 ACAC_8 32 -hpat1 74872 74884 TCTCTT_2 12 -hpat1 76180 76192 TTTGTT_2 12 -hpat1 77426 77441 TTT_5 15 -hpat1 78000 78015 TTT_5 15 -hpat1 80745 80757 TTTTCA_2 12 -hpat1 80793 80805 CTCTCT_2 12 -hpat1 81768 81780 CAAAAA_2 12 -hpat1 82354 82369 TTT_5 15 -hpat1 83933 83945 TAAATG_2 12 -hpat1 84619 84631 TCAAAA_2 12 -hpat1 86959 86971 TATATA_2 12 -hpat1 87244 87256 TTTCTG_2 12 -hpat1 87482 87494 TTTTCC_2 12 -hpat1 87621 87641 TCTC_5 20 -hpat1 87641 87653 TGTGTG_2 12 -hpat1 87656 87684 GTGT_7 28 -hpat1 90386 90401 AAA_5 15 -hpat1 91597 91609 CTAGAA_2 12 -hpat1 92663 92675 AAGAAA_2 12 -hpat1 92819 92831 TCAATG_2 12 -hpat1 93617 93629 AACAAA_2 12 -hpat1 95759 95771 ATCAGT_2 12 -hpat1 97919 97931 GTTTTT_2 12 -hpat1 98114 98126 ACCTCC_2 12 -hpat1 100820 100832 CCTGCC_2 12 -hpat1 100973 100985 CCCCAC_2 12 -hpat1 102824 102836 GGAGTT_2 12 -hpat1 103862 103874 CAGAAA_2 12 -hpat1 104934 104946 CTATCT_2 12 -hpat1 105271 105283 TTCTTT_2 12 -hpat1 105981 105993 AAAAAA_2 12 -hpat1 106335 106347 CATTAA_2 12 -hpat1 108697 108709 AACACA_2 12 -hpat1 109406 109421 TTT_5 15 -hpat1 109460 109472 AAAACA_2 12 -hpat1 109841 109853 AAACAA_2 12 -hpat1 109890 109902 TTAAAT_2 12 -hpat1 110330 110342 CAGCAA_2 12 -hpat1 110480 110492 AAGAAG_2 12 -hpat1 111085 111100 TTT_5 15 -hpat1 111898 111910 CATGTG_2 12 -hpat1 111998 112010 TTTTTT_2 12 -hpat1 112078 112090 ACCTCC_2 12 -hpat1 112759 112771 AGAAAG_2 12 -hpat1 113452 113464 GAAAAA_2 12 -hpat1 113688 113700 ATGTGT_2 12 -hpat1 113843 113855 TTTGTT_2 12 -hpat1 119636 119648 TGGTAC_2 12 -hpat1 120464 120476 CTAGAA_2 12 -hpat1 120547 120559 CACATG_2 12 -hpat1 121011 121035 AAAT_6 24 -hpat1 124024 124048 TTGT_6 24 -hpat1 124048 124066 TGT_6 18 -hpat1 124222 124234 TTTTTA_2 12 -hpat1 124604 124616 GAAAAA_2 12 -hpat1 125715 125727 AAAATT_2 12 -hpat1 125752 125764 CTAAAA_2 12 -hpat1 125767 125779 CAAAAA_2 12 -hpat1 125884 125896 TTTTTT_2 12 -hpat1 125905 125923 TTT_6 18 -hpat1 126102 126114 ACATAC_2 12 -hpat1 127209 127221 TATATA_2 12 -hpat1 128764 128776 GTATTT_2 12 -hpat1 128860 128872 ATTTTC_2 12 -hpat1 129322 129334 ACATAT_2 12 -hpat1 130113 130125 GTGTTT_2 12 -hpat1 131578 131593 TACAT_3 15 -hpat1 131738 131750 TTTGTC_2 12 -hpat1 131825 131837 TTCTGA_2 12 -hpat1 132616 132628 AGGAAC_2 12 -hpat1 134375 134387 AGATTT_2 12 -hpat1 135237 135249 ACATAG_2 12 -hpat1 135418 135430 CAACTT_2 12 -hpat1 136413 136431 CACACA_3 18 -hpat1 136956 136968 AAAAAG_2 12 -hpat1 137029 137041 AAAAAG_2 12 -hpat1 137211 137223 GGAGAG_2 12 -hpat1 137368 137380 AAACTA_2 12 -hpat1 137534 137546 CAAATC_2 12 -hpat1 137557 137575 AAA_6 18 -hpat1 137726 137738 GAAGTC_2 12 -hpat1 138895 138907 AAAAAA_2 12 -hpat1 139227 139242 AAA_5 15 -hpat1 140263 140275 TGTGTG_2 12 -hpat1 140826 140838 TTTTAT_2 12 -hpat1 141800 141812 TAATAT_2 12 -hpat1 141987 141999 TGTGTG_2 12 -hpat1 142001 142013 TATATA_2 12 -hpat1 143050 143070 TGTG_5 20 -hpat1 144387 144399 AAAAAA_2 12 -hpat1 144870 144888 TTG_6 18 -hpat1 147607 147619 CTAGAA_2 12 -hpat1 148147 148159 AAAAAA_2 12 -hpat1 148416 148428 CTCCCT_2 12 -hpat1 148858 148870 TAATAA_2 12 -hpat1 150185 150217 ACAC_8 32 -hpat1 152015 152027 AAAAAG_2 12 -hpat1 152575 152587 TGTGTG_2 12 -hpat1 155738 155750 AAGGCA_2 12 -hpat1 156307 156325 TTTTAG_3 18 -hpat1 158959 158971 ACCTAA_2 12 -hpat1 159220 159232 TCCCAA_2 12 -hpat1 160995 161007 GCTGCC_2 12 -hpat1 166905 166925 AATAA_4 20 -hpat1 168214 168238 ACAC_6 24 -hpat1 168671 168683 ATTAAC_2 12 -hpat1 168737 168767 GAAAA_6 30 -hpat1 170404 170416 AAAAAC_2 12 -hpat1 171677 171689 AACAAA_2 12 -hpat1 171975 171987 AAATCA_2 12 -hpat1 173023 173035 ATGGTG_2 12 -hpat1 175791 175803 TTCTTT_2 12 -hpat1 175803 175818 TTT_5 15 -hpat1 176853 176868 TTT_5 15 -hpat1 177754 177766 CTGCTT_2 12 -hpat1 180029 180047 TTTTTG_3 18 -hpat1 180498 180510 CCCACT_2 12 -hpat1 180842 180854 ATTTGT_2 12 -hpat1 180870 180902 GTGT_8 32 -hpat1 183232 183244 AAATAA_2 12 -hpat1 184101 184116 AAT_5 15 -hpat1 184343 184355 ACCTCC_2 12 -hpat1 184869 184887 TCTCTC_3 18 -hpat1 185110 185122 CCCAGG_2 12 -hpat1 186378 186390 AGTGGG_2 12 -hpat1 186479 186491 ATTCTT_2 12 -hpat1 188600 188612 TTCTTT_2 12 -hpat1 191291 191303 AAAAAA_2 12 -hpat1 192317 192329 AAAAAA_2 12 -hpat1 195172 195184 TGAAAG_2 12 -hpat1 200073 200088 TTT_5 15 -hpat1 202802 202814 ATATGT_2 12 -hpat1 202814 202826 ATATAT_2 12 -hpat1 202827 202863 TGTG_9 36 -hpat1 202863 202883 TATA_5 20 -hpat1 203518 203530 ACCTCC_2 12 -hpat1 206031 206043 ACAAAT_2 12 -hpat1 206399 206419 AGGG_5 20 -hpat1 206622 206666 GGAA_11 44 -hpat1 211254 211266 CAGAAA_2 12 -hpat1 213724 213736 AGATAA_2 12 -hpat1 217137 217185 AAAT_12 48 -hpat1 218420 218432 AAAAAT_2 12 -hpat1 218906 218918 AAATAA_2 12 -hpat1 219256 219274 TTT_6 18 -hpat1 222008 222020 AAAAAA_2 12 -hpat1 222156 222168 GCCTCC_2 12 -hpat1 223959 223971 AAAAAA_2 12 -hpat1 224547 224559 AACAAC_2 12 -hpat1 225190 225208 AAA_6 18 -hpat1 225401 225413 AATTAG_2 12 -hpat1 225595 225613 AAA_6 18 -hpat1 225616 225628 TGACTC_2 12 -hpat1 226077 226089 CTGATT_2 12 -hpat1 228564 228576 ATAAAA_2 12 -hpat1 228922 228940 AAA_6 18 -hpat1 230561 230589 TATA_7 28 -hpat1 230590 230618 AGAG_7 28 -hpat1 232104 232124 CACA_5 20 -hpat1 232605 232629 AAAAAG_4 24 -hpat1 232634 232682 AAGG_12 48 -hpat1 233854 233869 AAA_5 15 -hpat1 234128 234140 GGAGGT_2 12 -hpat1 234203 234215 AAAAAA_2 12 -hpat1 234533 234545 AAAAAA_2 12 -hpat1 235841 235853 GGAGGT_2 12 -hpat1 236234 236246 AAACAC_2 12 -hpat1 236490 236502 TTCTCT_2 12 -hpat1 237107 237147 AC_20 40 -hpat1 237920 237932 GGAGGT_2 12 -hpat1 237997 238009 AAAAAA_2 12 -hpat1 239084 239099 TTT_5 15 -hpat1 240472 240487 AAA_5 15 -hpat1 240933 240957 ATAT_6 24 -hpat1 241170 241182 ATATAT_2 12 -hpat1 241667 241687 TTTTG_4 20 -hpat1 242121 242161 AGAT_10 40 -hpat1 243503 243515 GAGAGA_2 12 -hpat1 246293 246329 TTTG_9 36 -hpat1 246700 246712 TCCTCA_2 12 -hpat1 247306 247324 AAA_6 18 -hpat1 247882 247894 ATGTTC_2 12 -hpat1 248586 248610 GTGT_6 24 -hpat1 248612 248630 GTGTGT_3 18 -hpat1 248665 248677 TGGCAG_2 12 -hpat1 249473 249488 ATAAA_3 15 -hpat1 250105 250117 CTCAAT_2 12 -hpat1 250498 250510 AAGAAG_2 12 -hpat1 250825 250837 CTCTAC_2 12 -hpat1 250950 250970 TAAA_5 20 -hpat1 252088 252100 CTCTCT_2 12 -hpat1 252705 252717 ATAAAA_2 12 -hpat1 252728 252740 AATAAT_2 12 -hpat1 253240 253252 CATGTG_2 12 -hpat1 254794 254809 TTT_5 15 -hpat1 256151 256171 AGGG_5 20 -hpat1 256551 256587 ACAC_9 36 -hpat1 257214 257226 AAAAAA_2 12 -hpat1 257469 257489 TTTTG_4 20 -hpat1 258084 258099 TCTTT_3 15 -hpat1 259011 259047 AGGG_9 36 -hpat1 259067 259079 AAAGAA_2 12 -hpat1 259110 259122 AAAGAA_2 12 -hpat1 259154 259169 AAAGA_3 15 -hpat1 262097 262109 GGGGTG_2 12 -hpat1 262175 262187 TTCTTC_2 12 -hpat1 262312 262324 AGGGGC_2 12 -hpat1 264200 264224 GGAG_6 24 -hpat1 264324 264348 GGAG_6 24 -hpat1 264476 264496 GGAG_5 20 -hpat1 264512 264536 GGAG_6 24 -hpat1 264544 264564 GGAG_5 20 -hpat1 265004 265016 GCCCCG_2 12 -hpat1 265566 265584 AAT_6 18 -hpat1 265802 265817 AAC_5 15 -hpat1 265865 265877 TAACAA_2 12 -hpat1 265930 265945 AAC_5 15 -hpat1 265993 266005 TAACAA_2 12 -hpat1 266185 266197 CTGGAA_2 12 -hpat1 266758 266778 TAAA_5 20 -hpat1 268394 268406 GGAGGT_2 12 -hpat1 268906 268918 TTTTTT_2 12 -hpat1 269911 269923 ATGGAC_2 12 -hpat1 271170 271182 GATTTA_2 12 -hpat1 271561 271573 TGAAAA_2 12 -hpat1 272102 272114 AGAGAG_2 12 -hpat1 272130 272145 AAAGG_3 15 -hpat1 272145 272160 AGAGG_3 15 -hpat1 272179 272191 AGGAAA_2 12 -hpat1 272191 272209 AGAAAA_3 18 -hpat1 273131 273143 TTACTG_2 12 -hpat1 273764 273794 TTTCTT_5 30 -hpat1 274214 274226 GAGCCT_2 12 -hpat1 274596 274608 GCCTGA_2 12 -hpat1 274849 274861 TGTTCT_2 12 -hpat1 277678 277690 ACACAC_2 12 -hpat1 278426 278438 AAAAAA_2 12 -hpat1 278574 278586 CCTAGT_2 12 -hpat1 279696 279708 TTTTTG_2 12 -hpat1 282511 282523 AAAAAT_2 12 -hpat1 282751 282763 TTGCTT_2 12 -hpat1 283101 283116 AAA_5 15 -hpat1 283585 283597 GGCGGC_2 12 -hpat1 283665 283677 CGGCGG_2 12 -hpat1 286602 286614 TGACTC_2 12 -hpat1 287368 287380 ACCTCC_2 12 -hpat1 288275 288287 AGAAAC_2 12 -hpat1 290124 290139 AAA_5 15 -hpat1 291851 291863 TTTTTT_2 12 -hpat1 292026 292038 TTTTTT_2 12 -hpat1 292209 292227 TTT_6 18 -hpat1 292582 292594 TTTTCT_2 12 -hpat1 292686 292698 TCTTTC_2 12 -hpat1 292829 292844 ATTTT_3 15 -hpat1 293585 293597 TTGAGG_2 12 -hpat1 293662 293682 AAAAT_4 20 -hpat1 294171 294183 TCTGCC_2 12 -hpat1 296513 296531 TTT_6 18 -hpat1 297141 297162 ATT_7 21 -hpat1 298176 298196 CCTC_5 20 -hpat1 298500 298512 TAATTT_2 12 -hpat1 298884 298896 CATCCA_2 12 -hpat1 299050 299062 TTTTTC_2 12 -hpat1 299062 299077 TTT_5 15 -hpat1 300064 300076 CCTCAA_2 12 -hpat1 300703 300721 TTT_6 18 -hpat1 301000 301012 TTTGTT_2 12 -hpat1 301467 301479 CCACAC_2 12 -hpat1 301528 301558 TAT_10 30 -hpat1 302528 302540 TTTTTT_2 12 -hpat1 303597 303609 AAAAAA_2 12 -hpat1 303763 303775 AAAAAT_2 12 -hpat1 304749 304761 AAAAAA_2 12 -hpat1 305046 305058 AAAAAA_2 12 -hpat1 305433 305465 CACA_8 32 -hpat1 305465 305477 CAAACA_2 12 -hpat1 306053 306065 AAAAAA_2 12 -hpat1 306496 306508 TGTTGG_2 12 -hpat1 307066 307078 AAAAAA_2 12 -hpat1 307298 307310 CAGCTC_2 12 -hpat1 308587 308607 TATT_5 20 -hpat1 309048 309060 AGCAGC_2 12 -hpat1 309968 309980 CCACCC_2 12 -hpat1 311299 311311 GAGGGG_2 12 -hpat1 311653 311665 CCCCCA_2 12 -hpat1 312003 312015 GCGGCT_2 12 -hpat1 312355 312373 GCC_6 18 -hpat1 312409 312421 GAGGAG_2 12 -hpat1 314010 314022 CCCTGT_2 12 -hpat1 314054 314069 GCCCC_3 15 -hpat1 314318 314336 TTT_6 18 -hpat1 314343 314355 AACAAC_2 12 -hpat1 315087 315099 ATAATA_2 12 -hpat1 315896 315908 CAGGCC_2 12 -hpat1 317486 317498 AAAAAA_2 12 -hpat1 319115 319127 TCTCTC_2 12 -hpat1 321248 321263 TTTTG_3 15 -hpat1 321263 321275 TTTTTG_2 12 -hpat1 321967 321985 TTC_6 18 -hpat1 321985 322033 CTT_16 48 -hpat1 322043 322055 TTCTTC_2 12 -hpat1 322061 322073 TTCTTC_2 12 -hpat1 322073 322085 CTCTTC_2 12 -hpat1 322085 322100 TTC_5 15 -hpat1 322101 322122 TCT_7 21 -hpat1 322122 322140 CCT_6 18 -hpat1 322153 322168 TTC_5 15 -hpat1 323617 323641 TCTC_6 24 -hpat1 323656 323674 AGAGAG_3 18 -hpat1 323765 323777 ACCATC_2 12 -hpat1 323845 323857 TCCCCC_2 12 -hpat1 324348 324384 TGTG_9 36 -hpat1 324772 324784 TTGTTG_2 12 -hpat1 325309 325321 GGAGGT_2 12 -hpat1 325760 325772 TTTTTT_2 12 -hpat1 325921 325936 TTT_5 15 -hpat1 325994 326018 TTCT_6 24 -hpat1 326131 326143 GCCTCA_2 12 -hpat1 326427 326439 ATAACA_2 12 -hpat1 326881 326901 CACA_5 20 -hpat1 328251 328263 ATATGA_2 12 -hpat1 329376 329396 TCTC_5 20 -hpat1 329865 329883 AAA_6 18 -hpat1 330392 330404 CTTCCC_2 12 -hpat1 331402 331414 CACACA_2 12 -hpat1 331417 331445 ACAC_7 28 -hpat1 331911 331923 AAAAAT_2 12 -hpat1 331928 331940 AAAAAG_2 12 -hpat1 332956 332968 GCCCCA_2 12 -hpat1 333161 333173 CACCCC_2 12 -hpat1 334122 334134 TTGTTG_2 12 -hpat1 334267 334329 GT_31 62 -hpat1 334654 334666 AAAAAA_2 12 -hpat1 335467 335479 CTGCAG_2 12 -hpat1 335607 335619 GGCCCT_2 12 -hpat1 335803 335815 TTGTAT_2 12 -hpat1 336041 336053 GAGGCT_2 12 -hpat1 337162 337174 TAAAAA_2 12 -hpat1 339090 339102 GGTGAG_2 12 -hpat1 340800 340812 TTTTTT_2 12 -hpat1 341152 341170 TTTTTA_3 18 -hpat1 342132 342147 AAA_5 15 -hpat1 343752 343764 GGAGGT_2 12 -hpat1 344174 344186 AAAATT_2 12 -hpat1 344341 344366 TTTTC_5 25 -hpat1 344366 344384 TTT_6 18 -hpat1 344598 344610 GGCCTC_2 12 -hpat1 347338 347350 ACACAG_2 12 -hpat1 347893 347905 GGAGGT_2 12 -hpat1 347971 347986 AAA_5 15 -hpat1 348738 348766 ATTT_7 28 -hpat1 348821 348833 ACCTCT_2 12 -hpat1 349403 349415 CCCCTG_2 12 -hpat1 350548 350563 AAA_5 15 -hpat1 351012 351024 CACATG_2 12 -hpat1 352173 352193 AAAG_5 20 -hpat1 353653 353665 TCTCTC_2 12 -hpat1 354070 354088 TTT_6 18 -hpat1 356741 356753 AGATGG_2 12 -hpat1 357236 357248 AATTCA_2 12 -hpat1 357792 357804 CCACCC_2 12 -hpat1 358581 358593 GTGAGA_2 12 -hpat1 359128 359148 AAAAG_4 20 -hpat1 359806 359826 TTAT_5 20 -hpat1 360491 360506 AAC_5 15 -hpat1 360639 360651 AGAGCA_2 12 -hpat1 360675 360687 AACAAC_2 12 -hpat1 360992 361004 AAAGAA_2 12 -hpat1 362641 362653 CTCTTC_2 12 -hpat1 362937 362952 TTT_5 15 -hpat1 363150 363162 GATCTT_2 12 -hpat1 363464 363479 TTT_5 15 -hpat1 364473 364488 TTATT_3 15 -hpat1 364492 364507 TTT_5 15 -hpat1 365379 365391 GGAGGT_2 12 -hpat1 366469 366484 AAA_5 15 -hpat1 367829 367841 GGGGTG_2 12 -hpat1 367884 367912 TGTG_7 28 -hpat1 367917 367929 GCGCGC_2 12 -hpat1 369145 369157 ACACAC_2 12 -hpat1 369222 369234 TTGTTT_2 12 -hpat1 370081 370093 ATTAGG_2 12 -hpat1 370891 370903 TTATTT_2 12 -hpat1 371202 371217 TTT_5 15 -hpat1 371648 371663 TTT_5 15 -hpat1 372439 372451 ACCTCC_2 12 -hpat1 373341 373356 AAA_5 15 -hpat1 373850 373862 GTTGGA_2 12 -hpat1 376040 376052 GGAGGT_2 12 -hpat1 377248 377260 CCTGAG_2 12 -hpat1 377812 377824 AAAAAA_2 12 -hpat1 378348 378360 TTTTTT_2 12 -hpat1 379128 379140 TTTTTT_2 12 -hpat1 379795 379807 TTTTCT_2 12 -hpat1 379823 379838 TTT_5 15 -hpat1 379901 379913 ACCTCC_2 12 -hpat1 380590 380602 AAAAAA_2 12 -hpat1 380954 380969 TTT_5 15 -hpat1 384330 384342 AAAAAA_2 12 -hpat1 384767 384779 TTTTGT_2 12 -hpat1 384883 384895 CTTCTG_2 12 -hpat1 386747 386759 CTGCAG_2 12 -hpat1 387479 387494 AAA_5 15 -hpat1 387950 387962 TGGGGG_2 12 -hpat1 388196 388208 GGAGGT_2 12 -hpat1 390060 390072 AATATA_2 12 -hpat1 390510 390522 AAAAAA_2 12 -hpat1 390938 390974 CACA_9 36 -hpat1 391184 391199 AAAAC_3 15 -hpat1 391212 391224 AACAAC_2 12 -hpat1 391729 391741 TTTTTT_2 12 -hpat1 393017 393029 GGCAGG_2 12 -hpat1 393262 393274 TGGAGC_2 12 -hpat1 393713 393725 GCTCCT_2 12 -hpat1 393744 393759 GCCCC_3 15 -hpat1 393906 393918 GCCCCG_2 12 -hpat1 394077 394089 CCGCCG_2 12 -hpat1 394171 394183 CACTTT_2 12 -hpat1 395340 395352 TTTTTT_2 12 -hpat1 395518 395530 TGGGAA_2 12 -hpat1 398199 398211 TTTTTT_2 12 -hpat1 399191 399203 AACAAC_2 12 -hpat1 399362 399374 TTTCCT_2 12 -hpat1 399445 399457 ACTGGC_2 12 -hpat1 399791 399806 AAA_5 15 -hpat1 399964 399976 AAAAAA_2 12 -hpat1 401244 401256 AAAAAC_2 12 -hpat1 402031 402049 TTT_6 18 -hpat1 403272 403300 TGTG_7 28 -hpat1 405045 405057 GACCCT_2 12 -hpat1 406469 406481 CCACCT_2 12 -hpat1 406634 406646 CCCCCA_2 12 -hpat1 406675 406687 CCCCAT_2 12 -hpat1 406728 406740 CCCCCA_2 12 -hpat1 406945 406957 AGCAGC_2 12 -hpat1 408179 408194 TCCCC_3 15 -hpat1 408398 408410 TTTTTT_2 12 -hpat1 409294 409306 CGGAGG_2 12 -hpat1 409373 409385 ATATAT_2 12 -hpat1 411078 411090 TTTTTT_2 12 -hpat1 411697 411715 TTT_6 18 -hpat1 411777 411789 ACCTCC_2 12 -hpat1 412136 412148 ATTTTT_2 12 -hpat1 413749 413761 CCCAGC_2 12 -hpat1 415299 415314 TTT_5 15 -hpat1 415760 415772 CAGAGG_2 12 -hpat1 416537 416549 CCACAT_2 12 -hpat1 418813 418825 CAGGGG_2 12 -hpat1 422181 422193 GAAACA_2 12 -hpat1 423211 423223 AAATAA_2 12 -hpat1 424000 424012 GTCTAG_2 12 -hpat1 424335 424347 GCCCAG_2 12 -hpat1 424667 424679 CAGCTG_2 12 -hpat1 425323 425335 GTCACA_2 12 -hpat1 425541 425553 CTACTC_2 12 -hpat1 427054 427066 TGAGGC_2 12 -hpat1 428930 428942 GAGGCA_2 12 -hpat1 429286 429298 ATAAAA_2 12 -hpat1 430038 430050 ACACAC_2 12 -hpat1 430203 430218 AAA_5 15 -hpat1 430891 430903 AAAAAC_2 12 -hpat1 433196 433214 TTT_6 18 -hpat1 433985 433997 CATTGA_2 12 -hpat1 434453 434465 GTTGTT_2 12 -hpat1 434762 434777 AAA_5 15 -hpat1 434914 434932 TTT_6 18 -hpat1 435225 435243 TTT_6 18 -hpat1 436224 436239 TTT_5 15 -hpat1 436386 436401 TTT_5 15 -hpat1 437625 437645 AAAT_5 20 -hpat1 438924 438936 AAAAAC_2 12 -hpat1 439558 439573 AAC_5 15 -hpat1 439699 439711 ACCTCC_2 12 -hpat1 440310 440325 AAA_5 15 -hpat1 440724 440748 ATT_8 24 -hpat1 440748 440760 TTATTT_2 12 -hpat1 441708 441723 AAAAT_3 15 -hpat1 442018 442036 AAAATA_3 18 -hpat1 442317 442329 CAAAAA_2 12 -hpat1 442718 442730 ACCTCC_2 12 -hpat1 443007 443022 TTT_5 15 -hpat1 443087 443099 ACCTCC_2 12 -hpat1 444385 444400 TTT_5 15 -hpat1 445704 445716 TTATTT_2 12 -hpat1 446504 446519 AAA_5 15 -hpat1 446849 446861 AACAAA_2 12 -hpat1 447435 447447 TTATTA_2 12 -hpat1 448340 448352 CTGCCC_2 12 -hpat1 448560 448572 TCGGCA_2 12 -hpat1 449222 449234 ATTGTG_2 12 -hpat1 449769 449781 TTTTTT_2 12 -hpat1 451022 451034 TTTGTT_2 12 -hpat1 452535 452547 ATCAGC_2 12 -hpat1 452701 452725 TATA_6 24 -hpat1 453076 453091 TTT_5 15 -hpat1 453850 453862 AAAAAT_2 12 -hpat1 453963 453975 CAGATA_2 12 -hpat1 455183 455195 ATTTAA_2 12 -hpat1 458293 458305 CTGTTG_2 12 -hpat1 459371 459383 AGTCTC_2 12 -hpat1 459469 459481 CCTGCC_2 12 -hpat1 461443 461455 GGAGGT_2 12 -hpat1 461518 461533 AAA_5 15 -hpat1 462040 462052 AGACTA_2 12 -hpat1 462061 462073 CAAAAG_2 12 -hpat1 463722 463734 ACCCAG_2 12 -hpat1 463955 463975 AAACA_4 20 -hpat1 464055 464067 GCATTT_2 12 -hpat1 466293 466317 TGTG_6 24 -hpat1 466326 466338 GTGTGT_2 12 -hpat1 467569 467581 TTTTTT_2 12 -hpat1 468460 468472 ACACAC_2 12 -hpat1 469649 469661 TGGGAA_2 12 -hpat1 470753 470777 TGTG_6 24 -hpat1 471053 471065 GGAGGC_2 12 -hpat1 471165 471221 TA_28 56 -hpat1 471297 471309 TCTCAC_2 12 -hpat1 471601 471613 TTGGAG_2 12 -hpat1 472083 472095 TACACA_2 12 -hpat1 474125 474140 TTT_5 15 -hpat1 476039 476051 TTAAAA_2 12 -hpat1 476069 476081 TCAAAA_2 12 -hpat1 476119 476131 TTTTTT_2 12 -hpat1 476420 476435 TTT_5 15 -hpat1 476496 476511 TTT_5 15 -hpat1 476789 476804 TTT_5 15 -hpat1 476978 476996 AAA_6 18 -hpat1 478009 478033 AAAACA_4 24 -hpat1 478268 478280 TTTTTT_2 12 -hpat1 479362 479374 CCACTG_2 12 -hpat1 480194 480206 CCTCCG_2 12 -hpat1 481378 481390 AAACAG_2 12 -hpat1 484766 484778 TTTTAC_2 12 -hpat1 485403 485415 AACAAA_2 12 -hpat1 485645 485657 CATCGG_2 12 -hpat1 486044 486062 AAA_6 18 -hpat1 487156 487168 TTTTTT_2 12 -hpat1 489257 489269 TCTCAT_2 12 -hpat1 490265 490283 AAAACA_3 18 -hpat1 490693 490705 TCAGCT_2 12 -hpat1 491754 491766 TTTTTT_2 12 -hpat1 492606 492618 CCTGCC_2 12 -hpat1 493272 493284 GGAGGC_2 12 -hpat1 493345 493357 CACACA_2 12 -hpat1 496258 496273 TTT_5 15 -hpat1 497785 497813 ACAC_7 28 -hpat1 498278 498290 TTCTTC_2 12 -hpat1 498873 498885 TATTTC_2 12 -hpat1 498951 498963 CACACA_2 12 -hpat1 499112 499124 AGGTGT_2 12 -hpat1 500426 500446 AAAC_5 20 -hpat1 500447 500459 AAAAAC_2 12 -hpat1 500767 500779 CAGCCT_2 12 -hpat1 501704 501716 CACACA_2 12 -hpat1 501889 501901 AAATGA_2 12 -hpat1 504614 504626 TATTTT_2 12 -hpat1 505627 505639 AAACAA_2 12 -hpat1 506287 506299 AAAGAC_2 12 -hpat1 507515 507527 AGTAAC_2 12 -hpat1 510501 510519 AAA_6 18 -hpat1 510632 510647 AAC_5 15 -hpat1 510703 510715 GAGGCT_2 12 -hpat1 510734 510746 GGAGGT_2 12 -hpat1 511424 511436 ATAAAA_2 12 -hpat1 511728 511743 AAA_5 15 -hpat1 511754 511766 AATAAT_2 12 -hpat1 513044 513056 GAGAGA_2 12 -hpat1 513077 513121 AG_22 44 -hpat1 513353 513365 AAAAAC_2 12 -hpat1 514713 514725 TTTTGT_2 12 -hpat1 515268 515283 TTT_5 15 -hpat1 516546 516561 TTT_5 15 -hpat1 517636 517648 CATGTA_2 12 -hpat1 518247 518259 TTTTTT_2 12 -hpat1 518942 518954 AAAAAC_2 12 -hpat1 519162 519174 TGTTTT_2 12 -hpat1 520950 520965 AAA_5 15 -hpat1 521037 521049 GGAGGT_2 12 -hpat1 521817 521835 AAA_6 18 -hpat1 522337 522349 GAAAAT_2 12 -hpat1 524041 524056 TTT_5 15 -hpat1 526368 526380 TTCACA_2 12 -hpat1 527825 527837 TTTTTA_2 12 -hpat1 528954 528966 CCTGAC_2 12 -hpat1 529164 529176 AACTCC_2 12 -hpat1 529759 529771 AGCGGC_2 12 -hpat1 532565 532585 CTCT_5 20 -hpat1 532764 532779 TAT_5 15 -hpat1 535073 535085 TTTTAT_2 12 -hpat1 535745 535773 AAAG_7 28 -hpat1 535781 535793 AGAGAG_2 12 -hpat1 536149 536161 TTTAGT_2 12 -hpat1 538739 538751 AAATAT_2 12 -hpat1 538772 538792 AAGG_5 20 -hpat1 538799 538811 TTTTTT_2 12 -hpat1 539338 539350 GGAGGT_2 12 -hpat1 540073 540085 AAAAAA_2 12 -hpat1 540497 540509 TGTTTT_2 12 -hpat1 541872 541887 AAATA_3 15 -hpat1 541888 541900 AACAAC_2 12 -hpat1 542947 542959 AAAAAA_2 12 -hpat1 542959 542977 ATATAT_3 18 -hpat1 543136 543148 CAACAA_2 12 -hpat1 543958 543970 GGAGGT_2 12 -hpat1 544032 544050 AAAAAC_3 18 -hpat1 544053 544068 ACC_5 15 -hpat1 544521 544533 TTGCTG_2 12 -hpat1 544657 544669 TTTTTT_2 12 -hpat1 546134 546146 CAAAAA_2 12 -hpat1 546381 546393 TTTTTC_2 12 -hpat1 546492 546504 AGCCTC_2 12 -hpat1 547433 547445 AAATAA_2 12 -hpat1 549625 549637 GAGAGG_2 12 -hpat1 550638 550658 TGTT_5 20 -hpat1 550722 550734 ACCTCC_2 12 -hpat1 551638 551650 TTTTAT_2 12 -hpat1 552256 552280 AAAAAT_4 24 -hpat1 552763 552781 TTA_6 18 -hpat1 552847 552859 ACCTCC_2 12 -hpat1 556059 556071 GGTTTT_2 12 -hpat1 556295 556310 TTT_5 15 -hpat1 556974 557006 AAAT_8 32 -hpat1 557123 557138 TTT_5 15 -hpat1 558009 558021 TGGCTC_2 12 -hpat1 558470 558482 GATCTG_2 12 -hpat1 562680 562692 CTGTAA_2 12 -hpat1 562696 562708 TTTTCT_2 12 -hpat1 563924 563936 GAGGCT_2 12 -hpat1 564029 564044 AAA_5 15 -hpat1 564726 564758 ACAC_8 32 -hpat1 565342 565354 CATGTG_2 12 -hpat1 565425 565437 TTCTAG_2 12 -hpat1 566571 566583 AGGAGA_2 12 -hpat1 566983 566995 AAAACA_2 12 -hpat1 569330 569342 GGAGGT_2 12 -hpat1 569404 569416 AAAAAT_2 12 -hpat1 570031 570043 TTTTTT_2 12 -hpat1 570540 570558 AAT_6 18 -hpat1 571279 571291 TGTATA_2 12 -hpat1 571317 571329 TGTGTG_2 12 -hpat1 572151 572163 TTATTA_2 12 -hpat1 573515 573530 TTG_5 15 -hpat1 573850 573862 TTTTTT_2 12 -hpat1 575451 575471 AATTA_4 20 -hpat1 575471 575483 AATTTT_2 12 -hpat1 575668 575680 ATTTTT_2 12 -hpat1 575801 575813 ATTTTT_2 12 -hpat1 575870 575894 ACAC_6 24 -hpat1 577211 577226 TTT_5 15 -hpat1 577376 577388 TTTGTA_2 12 -hpat1 577976 577991 TTGGT_3 15 -hpat1 578001 578013 CCTTTC_2 12 -hpat1 578511 578523 TTTTTT_2 12 -hpat1 578670 578702 TATA_8 32 -hpat1 578702 578717 TTT_5 15 -hpat1 578848 578866 TTT_6 18 -hpat1 579477 579489 AGAGAG_2 12 -hpat1 579492 579504 GGGTCT_2 12 -hpat1 580328 580340 TTTTTA_2 12 -hpat1 580419 580431 ACCTCC_2 12 -hpat1 580976 580988 AAAAAA_2 12 -hpat1 581224 581242 TTA_6 18 -hpat1 581451 581463 CAGGGG_2 12 -hpat1 581508 581520 GGGTGG_2 12 -hpat1 582117 582141 AAAACA_4 24 -hpat1 582141 582156 AAACA_3 15 -hpat1 584745 584763 TTT_6 18 -hpat1 585484 585496 GAGGCT_2 12 -hpat1 587187 587199 GGAGGT_2 12 -hpat1 587260 587275 AAA_5 15 -hpat1 588889 588901 CAGCCC_2 12 -hpat1 589707 589719 CCCCAC_2 12 -hpat1 589882 589894 CACACT_2 12 -hpat1 591641 591653 CCAGGT_2 12 -hpat1 591775 591787 GGGCTT_2 12 -hpat1 591896 591908 CAGGGA_2 12 -hpat1 592320 592332 GGAGGC_2 12 -hpat1 592394 592412 AAA_6 18 -hpat1 593793 593805 TCATCT_2 12 -hpat1 595348 595360 CGGCGG_2 12 -hpat1 595566 595578 TCCCGC_2 12 -hpat1 595601 595613 CACCAC_2 12 -hpat1 595621 595636 CGC_5 15 -hpat1 595664 595679 GCCGC_3 15 -hpat1 595737 595749 TCCTCG_2 12 -hpat1 597755 597767 TGAGAC_2 12 -hpat1 599393 599405 GTGTGC_2 12 -hpat1 600005 600025 TCTC_5 20 -hpat1 600025 600037 TATATA_2 12 -hpat1 600040 600052 ATATAT_2 12 -hpat1 600117 600129 TATATA_2 12 -hpat1 601867 601882 TTT_5 15 -hpat1 603187 603199 GAAGTG_2 12 -hpat1 608984 608996 GCTGTG_2 12 -hpat1 610191 610203 TATCTC_2 12 -hpat1 612380 612392 TCACCA_2 12 -hpat1 612520 612535 CTTTT_3 15 -hpat1 613445 613457 CCATCC_2 12 -hpat1 613963 613975 TTCTTG_2 12 -hpat1 615610 615622 AGAAGG_2 12 -hpat1 615631 615643 AAGAAG_2 12 -hpat1 617677 617697 TTTTG_4 20 -hpat1 620320 620332 GCCAGC_2 12 -hpat1 620337 620349 GGGGTG_2 12 -hpat1 621049 621061 AGGGCC_2 12 -hpat1 621850 621862 TCTCTC_2 12 -hpat1 622004 622016 GATTTT_2 12 -hpat1 622556 622571 ACC_5 15 -hpat1 622585 622606 CAC_7 21 -hpat1 623138 623150 ACACAA_2 12 -hpat1 623377 623389 TGGACA_2 12 -hpat1 623705 623723 AAATAA_3 18 -hpat1 624012 624030 AAA_6 18 -hpat1 624647 624662 TTT_5 15 -hpat1 624723 624735 ACCTCC_2 12 -hpat1 624981 624993 TTTTTT_2 12 -hpat1 625128 625146 TTTTAT_3 18 -hpat1 625594 625606 AGCCAG_2 12 -hpat1 627029 627041 GAGGCT_2 12 -hpat1 627186 627198 AATAAC_2 12 -hpat1 629077 629092 TGA_5 15 -hpat1 631393 631405 AACAAC_2 12 -hpat1 631428 631443 AAA_5 15 -hpat1 632731 632743 GTGGGG_2 12 -hpat1 633721 633733 ACTCTC_2 12 -hpat1 634318 634330 CTTCCT_2 12 -hpat1 634611 634623 TCCTTG_2 12 -hpat1 635903 635918 AAA_5 15 -hpat1 637885 637900 AAA_5 15 -hpat1 639390 639402 CGCCGC_2 12 -hpat1 639741 639759 GCGGGG_3 18 -hpat1 640686 640698 CCTTTC_2 12 -hpat1 642771 642783 AAAAAA_2 12 -hpat1 646663 646681 AAA_6 18 -hpat1 649140 649152 AGCTGG_2 12 -hpat1 649224 649236 GTGTGT_2 12 -hpat1 649744 649759 CCGGG_3 15 -hpat1 649864 649876 GCGAGG_2 12 -hpat1 650431 650443 CCGCCC_2 12 -hpat1 650443 650455 CGCCGC_2 12 -hpat1 651676 651688 CCCCTC_2 12 -hpat1 651818 651830 TGCCTC_2 12 -hpat1 652398 652410 GATAGT_2 12 -hpat1 652601 652613 CTCCTT_2 12 -hpat1 653053 653065 GGAAGG_2 12 -hpat1 655085 655103 TACTGC_3 18 -hpat1 655716 655728 AGCCTC_2 12 -hpat1 656008 656020 CCTCCC_2 12 -hpat1 657237 657249 AGGCCA_2 12 -hpat1 657508 657520 TTGGAC_2 12 -hpat1 657609 657621 TGGACC_2 12 -hpat1 658605 658633 GTGT_7 28 -hpat1 660058 660070 GTGTCA_2 12 -hpat1 660331 660343 GCTGTA_2 12 -hpat1 660403 660415 CTCTCT_2 12 -hpat1 660565 660577 TCTCTC_2 12 -hpat1 660591 660619 TCTC_7 28 -hpat1 660620 660648 CACA_7 28 -hpat1 660895 660927 GTGT_8 32 -hpat1 660984 660996 TGGGGA_2 12 -hpat1 661630 661642 CCCCCG_2 12 -hpat1 661935 661947 GGCTCG_2 12 -hpat1 661952 661964 GGCGGC_2 12 -hpat1 662188 662200 CAGAGA_2 12 -hpat1 662390 662402 ACACAC_2 12 -hpat1 662616 662628 CCTCTC_2 12 -hpat1 663603 663618 AAA_5 15 -hpat1 663770 663791 AAT_7 21 -hpat1 664080 664092 TTTTTT_2 12 -hpat1 667667 667679 AATGGG_2 12 -hpat1 668024 668036 GTGTAA_2 12 -hpat1 668717 668729 CCATTT_2 12 -hpat1 669899 669914 AAA_5 15 -hpat1 670207 670219 TTTTTA_2 12 -hpat1 671190 671202 GAGGGG_2 12 -hpat1 671868 671886 TACAAA_3 18 -hpat1 671886 671925 TAA_13 39 -hpat1 671963 671975 CTGAGG_2 12 -hpat1 672092 672104 AACAAC_2 12 -hpat1 672104 672116 AAAGAA_2 12 -hpat1 672621 672639 AAA_6 18 -hpat1 675612 675624 AAGTGT_2 12 -hpat1 675730 675742 GGCACA_2 12 -hpat1 676338 676350 ATTTCT_2 12 -hpat1 676351 676363 TTTATT_2 12 -hpat1 677002 677034 GTGT_8 32 -hpat1 677456 677468 AGAAAG_2 12 -hpat1 678387 678399 TGAAAC_2 12 -hpat1 678841 678856 TTCTT_3 15 -hpat1 678857 678869 TTTTTC_2 12 -hpat1 684577 684589 AATAAC_2 12 -hpat1 684952 684964 AGAGCC_2 12 -hpat1 685311 685323 GGAGGT_2 12 -hpat1 686067 686079 CGGGGG_2 12 -hpat1 686824 686842 TTT_6 18 -hpat1 686898 686910 CAGCCT_2 12 -hpat1 687585 687605 TCAA_5 20 -hpat1 687650 687662 AGGGAG_2 12 -hpat1 688066 688078 TCCTGG_2 12 -hpat1 689017 689037 AAAT_5 20 -hpat1 690131 690143 TTTCTT_2 12 -hpat1 690302 690314 AAGAGG_2 12 -hpat1 693706 693718 AGGGGC_2 12 -hpat1 694425 694437 TTTTGT_2 12 -hpat1 694505 694517 CAGCCT_2 12 -hpat1 694597 694609 TTTTTT_2 12 -hpat1 694902 694914 TATTTA_2 12 -hpat1 695264 695276 CAAGGC_2 12 -hpat1 696495 696507 CGCCCC_2 12 -hpat1 696717 696729 CGCCCC_2 12 -hpat1 697066 697078 TGGGGG_2 12 -hpat1 697567 697587 GTGT_5 20 -hpat1 698581 698593 TCTGAT_2 12 -hpat1 698950 698962 AATTGA_2 12 -hpat1 699156 699171 TTT_5 15 +hpat1 507 526 TTTA_5 20 +hpat1 1963 1974 CCCCAC_2 12 +hpat1 2146 2163 AAAAAC_3 18 +hpat1 3034 3048 AAAAC_3 15 +hpat1 3236 3247 TTTTTT_2 12 +hpat1 4117 4128 GGCAGG_2 12 +hpat1 4311 4325 GTTTT_3 15 +hpat1 5472 5483 TTTTTG_2 12 +hpat1 5584 5595 AGCCCC_2 12 +hpat1 7239 7250 GAAAAA_2 12 +hpat1 8173 8184 AAAAAA_2 12 +hpat1 8303 8314 GAGAGA_2 12 +hpat1 8744 8755 GGAGGT_2 12 +hpat1 8828 8845 AGAAAA_3 18 +hpat1 9495 9506 GGAGGT_2 12 +hpat1 9571 9595 AAAAC_5 25 +hpat1 11623 11634 AGGGAA_2 12 +hpat1 11651 11662 AACAAC_2 12 +hpat1 12486 12497 CCTCTG_2 12 +hpat1 13457 13468 ACCCTA_2 12 +hpat1 13471 13488 CCCTAA_3 18 +hpat1 13489 13500 CCCCAA_2 12 +hpat1 13501 13518 CCCCAG_3 18 +hpat1 13523 13546 AACCCT_4 24 +hpat1 13559 13582 CCCTAA_4 24 +hpat1 13598 13609 ACCCTA_2 12 +hpat1 13612 13635 ACCCTA_4 24 +hpat1 13641 13658 AACCCC_3 18 +hpat1 13659 13670 AACCCT_2 12 +hpat1 13691 13708 ACCCTC_3 18 +hpat1 13721 13744 AACCCC_4 24 +hpat1 13747 13758 CCCAAC_2 12 +hpat1 13767 13778 CTCACC_2 12 +hpat1 14307 14318 GGCGCA_2 12 +hpat1 14336 14347 GGCGCA_2 12 +hpat1 14384 14395 GGCGCA_2 12 +hpat1 14472 14483 GGGGGG_2 12 +hpat1 16148 16159 GAGTGG_2 12 +hpat1 16547 16558 CTGAGG_2 12 +hpat1 17030 17041 CAGGCA_2 12 +hpat1 18072 18083 GTCTGG_2 12 +hpat1 18120 18131 TCGTCC_2 12 +hpat1 18795 18806 GCAGGC_2 12 +hpat1 19207 19218 TGCTCC_2 12 +hpat1 20148 20159 GGTGGT_2 12 +hpat1 22835 22846 GGGAGG_2 12 +hpat1 22939 22950 AAGCCA_2 12 +hpat1 24658 24669 AAAAAA_2 12 +hpat1 25690 25701 ATTCAC_2 12 +hpat1 26499 26510 CCCCTG_2 12 +hpat1 29330 29341 CCTCCA_2 12 +hpat1 30089 30100 CCAGGA_2 12 +hpat1 31904 31915 GTGTGT_2 12 +hpat1 32448 32459 GGAGGT_2 12 +hpat1 32998 33009 TTTTCT_2 12 +hpat1 35194 35205 GCCCAG_2 12 +hpat1 35991 36002 CTCTCC_2 12 +hpat1 36299 36310 TCTCTG_2 12 +hpat1 36311 36338 TCTC_7 28 +hpat1 36363 36374 TCTCTC_2 12 +hpat1 37142 37153 AAAAAA_2 12 +hpat1 37229 37240 ACACAC_2 12 +hpat1 38874 38885 AAAAAA_2 12 +hpat1 39406 39417 CATGTG_2 12 +hpat1 39489 39500 TTCTAG_2 12 +hpat1 40468 40482 TCTGT_3 15 +hpat1 40503 40514 GTACCA_2 12 +hpat1 43740 43764 TCCAT_5 25 +hpat1 43807 43826 CACTC_4 20 +hpat1 43855 43869 TCCAC_3 15 +hpat1 43965 43984 TCCAC_4 20 +hpat1 44030 44044 TCCAC_3 15 +hpat1 44255 44269 TCCAC_3 15 +hpat1 44372 44386 CATTC_3 15 +hpat1 44415 44429 TCCAC_3 15 +hpat1 44790 44804 TCCAC_3 15 +hpat1 44879 44903 TTCCA_5 25 +hpat1 44920 44934 TCCAC_3 15 +hpat1 45140 45154 TCCAT_3 15 +hpat1 45260 45274 TCCAT_3 15 +hpat1 45344 45368 TCCAT_5 25 +hpat1 45369 45383 TCCAC_3 15 +hpat1 45458 45472 CTCCA_3 15 +hpat1 45526 45545 CATTC_4 20 +hpat1 45554 45573 TCCAT_4 20 +hpat1 45609 45623 TCCAC_3 15 +hpat1 45743 45757 CTCCA_3 15 +hpat1 45874 45888 TCCAT_3 15 +hpat1 45889 45903 TCCAC_3 15 +hpat1 45999 46013 TCCAC_3 15 +hpat1 46017 46031 ACTCC_3 15 +hpat1 46139 46153 TCCAC_3 15 +hpat1 46299 46313 TCCAC_3 15 +hpat1 46363 46377 TTCCA_3 15 +hpat1 46416 46430 CACTC_3 15 +hpat1 46509 46523 TCCAC_3 15 +hpat1 46838 46852 CTCCA_3 15 +hpat1 46948 46967 TCCAT_4 20 +hpat1 47042 47056 CTCCA_3 15 +hpat1 47088 47102 TCCAT_3 15 +hpat1 47107 47131 TTCCA_5 25 +hpat1 47141 47160 ATTCC_4 20 +hpat1 47161 47175 ACTCC_3 15 +hpat1 47200 47214 CACTC_3 15 +hpat1 47218 47232 TCCAC_3 15 +hpat1 47303 47322 TCCAC_4 20 +hpat1 47438 47452 TCCAC_3 15 +hpat1 47488 47502 TCCAC_3 15 +hpat1 47531 47545 ACTCC_3 15 +hpat1 47598 47612 TCCAC_3 15 +hpat1 47777 47791 TCCAT_3 15 +hpat1 47952 47966 TCCAC_3 15 +hpat1 48075 48089 ATTCC_3 15 +hpat1 48518 48532 ACTCC_3 15 +hpat1 48546 48560 CATTC_3 15 +hpat1 48640 48654 CATTC_3 15 +hpat1 48673 48692 TCCAT_4 20 +hpat1 48758 48772 TCCAT_3 15 +hpat1 48806 48825 ATTCC_4 20 +hpat1 48826 48840 ACTCC_3 15 +hpat1 48841 48855 ATTCC_3 15 +hpat1 49027 49041 CTCCA_3 15 +hpat1 49266 49280 ACTCC_3 15 +hpat1 49348 49362 TCCAC_3 15 +hpat1 49404 49418 CCACT_3 15 +hpat1 49498 49512 TCCAC_3 15 +hpat1 49523 49537 TCCAC_3 15 +hpat1 49658 49672 TCCAT_3 15 +hpat1 49681 49700 ATTCC_4 20 +hpat1 49856 49875 ATTCC_4 20 +hpat1 50101 50115 TCCAT_3 15 +hpat1 50215 50229 TCCAT_3 15 +hpat1 50232 50246 CACTC_3 15 +hpat1 50315 50334 TCCAC_4 20 +hpat1 50362 50376 CACTC_3 15 +hpat1 50435 50449 TCCAC_3 15 +hpat1 50475 50489 TCCAC_3 15 +hpat1 50735 50749 TCCAT_3 15 +hpat1 50750 50764 TCCAC_3 15 +hpat1 50775 50794 TCCAT_4 20 +hpat1 50800 50814 TCCAC_3 15 +hpat1 50835 50849 TCCAC_3 15 +hpat1 50918 50932 ATTCC_3 15 +hpat1 51010 51024 TCCAC_3 15 +hpat1 51095 51109 TCCAT_3 15 +hpat1 51153 51172 ATTCC_4 20 +hpat1 51265 51279 TCCAC_3 15 +hpat1 51281 51295 CCATT_3 15 +hpat1 51368 51382 ACTCC_3 15 +hpat1 51539 51553 TCCAT_3 15 +hpat1 51674 51688 TCCAT_3 15 +hpat1 51764 51778 TCCAC_3 15 +hpat1 51789 51803 TCCAC_3 15 +hpat1 51919 51933 TCCAC_3 15 +hpat1 52084 52098 TCCAC_3 15 +hpat1 52224 52238 TCCAT_3 15 +hpat1 52299 52313 TCCAC_3 15 +hpat1 52508 52519 GCCTTT_2 12 +hpat1 53676 53687 TTTCAG_2 12 +hpat1 55005 55016 AAAAAC_2 12 +hpat1 58746 58757 GCTTAT_2 12 +hpat1 59055 59066 TAGAAA_2 12 +hpat1 61658 61669 GGAGGT_2 12 +hpat1 61733 61747 AAA_5 15 +hpat1 62761 62775 AAA_5 15 +hpat1 65522 65533 TTTTTT_2 12 +hpat1 67692 67703 CTCAGA_2 12 +hpat1 68526 68537 TGCCTC_2 12 +hpat1 68608 68622 TTT_5 15 +hpat1 68851 68862 CAGCCT_2 12 +hpat1 69176 69187 CCTTAT_2 12 +hpat1 69632 69646 AAAAC_3 15 +hpat1 72054 72065 CTCTCC_2 12 +hpat1 73588 73599 CAAATA_2 12 +hpat1 73891 73922 ACAC_8 32 +hpat1 74873 74884 TCTCTT_2 12 +hpat1 76181 76192 TTTGTT_2 12 +hpat1 77427 77441 TTT_5 15 +hpat1 78001 78015 TTT_5 15 +hpat1 80746 80757 TTTTCA_2 12 +hpat1 80794 80805 CTCTCT_2 12 +hpat1 81769 81780 CAAAAA_2 12 +hpat1 82355 82369 TTT_5 15 +hpat1 83934 83945 TAAATG_2 12 +hpat1 84620 84631 TCAAAA_2 12 +hpat1 86960 86971 TATATA_2 12 +hpat1 87245 87256 TTTCTG_2 12 +hpat1 87483 87494 TTTTCC_2 12 +hpat1 87622 87641 TCTC_5 20 +hpat1 87642 87653 TGTGTG_2 12 +hpat1 87657 87684 GTGT_7 28 +hpat1 90387 90401 AAA_5 15 +hpat1 91598 91609 CTAGAA_2 12 +hpat1 92664 92675 AAGAAA_2 12 +hpat1 92820 92831 TCAATG_2 12 +hpat1 93618 93629 AACAAA_2 12 +hpat1 95760 95771 ATCAGT_2 12 +hpat1 97920 97931 GTTTTT_2 12 +hpat1 98115 98126 ACCTCC_2 12 +hpat1 100821 100832 CCTGCC_2 12 +hpat1 100974 100985 CCCCAC_2 12 +hpat1 102825 102836 GGAGTT_2 12 +hpat1 103863 103874 CAGAAA_2 12 +hpat1 104935 104946 CTATCT_2 12 +hpat1 105272 105283 TTCTTT_2 12 +hpat1 105982 105993 AAAAAA_2 12 +hpat1 106336 106347 CATTAA_2 12 +hpat1 108698 108709 AACACA_2 12 +hpat1 109407 109421 TTT_5 15 +hpat1 109461 109472 AAAACA_2 12 +hpat1 109842 109853 AAACAA_2 12 +hpat1 109891 109902 TTAAAT_2 12 +hpat1 110331 110342 CAGCAA_2 12 +hpat1 110481 110492 AAGAAG_2 12 +hpat1 111086 111100 TTT_5 15 +hpat1 111899 111910 CATGTG_2 12 +hpat1 111999 112010 TTTTTT_2 12 +hpat1 112079 112090 ACCTCC_2 12 +hpat1 112760 112771 AGAAAG_2 12 +hpat1 113453 113464 GAAAAA_2 12 +hpat1 113689 113700 ATGTGT_2 12 +hpat1 113844 113855 TTTGTT_2 12 +hpat1 119637 119648 TGGTAC_2 12 +hpat1 120465 120476 CTAGAA_2 12 +hpat1 120548 120559 CACATG_2 12 +hpat1 121012 121035 AAAT_6 24 +hpat1 124025 124048 TTGT_6 24 +hpat1 124049 124066 TGT_6 18 +hpat1 124223 124234 TTTTTA_2 12 +hpat1 124605 124616 GAAAAA_2 12 +hpat1 125716 125727 AAAATT_2 12 +hpat1 125753 125764 CTAAAA_2 12 +hpat1 125768 125779 CAAAAA_2 12 +hpat1 125885 125896 TTTTTT_2 12 +hpat1 125906 125923 TTT_6 18 +hpat1 126103 126114 ACATAC_2 12 +hpat1 127210 127221 TATATA_2 12 +hpat1 128765 128776 GTATTT_2 12 +hpat1 128861 128872 ATTTTC_2 12 +hpat1 129323 129334 ACATAT_2 12 +hpat1 130114 130125 GTGTTT_2 12 +hpat1 131579 131593 TACAT_3 15 +hpat1 131739 131750 TTTGTC_2 12 +hpat1 131826 131837 TTCTGA_2 12 +hpat1 132617 132628 AGGAAC_2 12 +hpat1 134376 134387 AGATTT_2 12 +hpat1 135238 135249 ACATAG_2 12 +hpat1 135419 135430 CAACTT_2 12 +hpat1 136414 136431 CACACA_3 18 +hpat1 136957 136968 AAAAAG_2 12 +hpat1 137030 137041 AAAAAG_2 12 +hpat1 137212 137223 GGAGAG_2 12 +hpat1 137369 137380 AAACTA_2 12 +hpat1 137535 137546 CAAATC_2 12 +hpat1 137558 137575 AAA_6 18 +hpat1 137727 137738 GAAGTC_2 12 +hpat1 138896 138907 AAAAAA_2 12 +hpat1 139228 139242 AAA_5 15 +hpat1 140264 140275 TGTGTG_2 12 +hpat1 140827 140838 TTTTAT_2 12 +hpat1 141801 141812 TAATAT_2 12 +hpat1 141988 141999 TGTGTG_2 12 +hpat1 142002 142013 TATATA_2 12 +hpat1 143051 143070 TGTG_5 20 +hpat1 144388 144399 AAAAAA_2 12 +hpat1 144871 144888 TTG_6 18 +hpat1 147608 147619 CTAGAA_2 12 +hpat1 148148 148159 AAAAAA_2 12 +hpat1 148417 148428 CTCCCT_2 12 +hpat1 148859 148870 TAATAA_2 12 +hpat1 150186 150217 ACAC_8 32 +hpat1 152016 152027 AAAAAG_2 12 +hpat1 152576 152587 TGTGTG_2 12 +hpat1 155739 155750 AAGGCA_2 12 +hpat1 156308 156325 TTTTAG_3 18 +hpat1 158960 158971 ACCTAA_2 12 +hpat1 159221 159232 TCCCAA_2 12 +hpat1 160996 161007 GCTGCC_2 12 +hpat1 166906 166925 AATAA_4 20 +hpat1 168215 168238 ACAC_6 24 +hpat1 168672 168683 ATTAAC_2 12 +hpat1 168738 168767 GAAAA_6 30 +hpat1 170405 170416 AAAAAC_2 12 +hpat1 171678 171689 AACAAA_2 12 +hpat1 171976 171987 AAATCA_2 12 +hpat1 173024 173035 ATGGTG_2 12 +hpat1 175792 175803 TTCTTT_2 12 +hpat1 175804 175818 TTT_5 15 +hpat1 176854 176868 TTT_5 15 +hpat1 177755 177766 CTGCTT_2 12 +hpat1 180030 180047 TTTTTG_3 18 +hpat1 180499 180510 CCCACT_2 12 +hpat1 180843 180854 ATTTGT_2 12 +hpat1 180871 180902 GTGT_8 32 +hpat1 183233 183244 AAATAA_2 12 +hpat1 184102 184116 AAT_5 15 +hpat1 184344 184355 ACCTCC_2 12 +hpat1 184870 184887 TCTCTC_3 18 +hpat1 185111 185122 CCCAGG_2 12 +hpat1 186379 186390 AGTGGG_2 12 +hpat1 186480 186491 ATTCTT_2 12 +hpat1 188601 188612 TTCTTT_2 12 +hpat1 191292 191303 AAAAAA_2 12 +hpat1 192318 192329 AAAAAA_2 12 +hpat1 195173 195184 TGAAAG_2 12 +hpat1 200074 200088 TTT_5 15 +hpat1 202803 202814 ATATGT_2 12 +hpat1 202815 202826 ATATAT_2 12 +hpat1 202828 202863 TGTG_9 36 +hpat1 202864 202883 TATA_5 20 +hpat1 203519 203530 ACCTCC_2 12 +hpat1 206032 206043 ACAAAT_2 12 +hpat1 206400 206419 AGGG_5 20 +hpat1 206623 206666 GGAA_11 44 +hpat1 211255 211266 CAGAAA_2 12 +hpat1 213725 213736 AGATAA_2 12 +hpat1 217138 217185 AAAT_12 48 +hpat1 218421 218432 AAAAAT_2 12 +hpat1 218907 218918 AAATAA_2 12 +hpat1 219257 219274 TTT_6 18 +hpat1 222009 222020 AAAAAA_2 12 +hpat1 222157 222168 GCCTCC_2 12 +hpat1 223960 223971 AAAAAA_2 12 +hpat1 224548 224559 AACAAC_2 12 +hpat1 225191 225208 AAA_6 18 +hpat1 225402 225413 AATTAG_2 12 +hpat1 225596 225613 AAA_6 18 +hpat1 225617 225628 TGACTC_2 12 +hpat1 226078 226089 CTGATT_2 12 +hpat1 228565 228576 ATAAAA_2 12 +hpat1 228923 228940 AAA_6 18 +hpat1 230562 230589 TATA_7 28 +hpat1 230591 230618 AGAG_7 28 +hpat1 232105 232124 CACA_5 20 +hpat1 232606 232629 AAAAAG_4 24 +hpat1 232635 232682 AAGG_12 48 +hpat1 233855 233869 AAA_5 15 +hpat1 234129 234140 GGAGGT_2 12 +hpat1 234204 234215 AAAAAA_2 12 +hpat1 234534 234545 AAAAAA_2 12 +hpat1 235842 235853 GGAGGT_2 12 +hpat1 236235 236246 AAACAC_2 12 +hpat1 236491 236502 TTCTCT_2 12 +hpat1 237108 237147 AC_20 40 +hpat1 237921 237932 GGAGGT_2 12 +hpat1 237998 238009 AAAAAA_2 12 +hpat1 239085 239099 TTT_5 15 +hpat1 240473 240487 AAA_5 15 +hpat1 240934 240957 ATAT_6 24 +hpat1 241171 241182 ATATAT_2 12 +hpat1 241668 241687 TTTTG_4 20 +hpat1 242122 242161 AGAT_10 40 +hpat1 243504 243515 GAGAGA_2 12 +hpat1 246294 246329 TTTG_9 36 +hpat1 246701 246712 TCCTCA_2 12 +hpat1 247307 247324 AAA_6 18 +hpat1 247883 247894 ATGTTC_2 12 +hpat1 248587 248610 GTGT_6 24 +hpat1 248613 248630 GTGTGT_3 18 +hpat1 248666 248677 TGGCAG_2 12 +hpat1 249474 249488 ATAAA_3 15 +hpat1 250106 250117 CTCAAT_2 12 +hpat1 250499 250510 AAGAAG_2 12 +hpat1 250826 250837 CTCTAC_2 12 +hpat1 250951 250970 TAAA_5 20 +hpat1 252089 252100 CTCTCT_2 12 +hpat1 252706 252717 ATAAAA_2 12 +hpat1 252729 252740 AATAAT_2 12 +hpat1 253241 253252 CATGTG_2 12 +hpat1 254795 254809 TTT_5 15 +hpat1 256152 256171 AGGG_5 20 +hpat1 256552 256587 ACAC_9 36 +hpat1 257215 257226 AAAAAA_2 12 +hpat1 257470 257489 TTTTG_4 20 +hpat1 258085 258099 TCTTT_3 15 +hpat1 259012 259047 AGGG_9 36 +hpat1 259068 259079 AAAGAA_2 12 +hpat1 259111 259122 AAAGAA_2 12 +hpat1 259155 259169 AAAGA_3 15 +hpat1 262098 262109 GGGGTG_2 12 +hpat1 262176 262187 TTCTTC_2 12 +hpat1 262313 262324 AGGGGC_2 12 +hpat1 264201 264224 GGAG_6 24 +hpat1 264325 264348 GGAG_6 24 +hpat1 264477 264496 GGAG_5 20 +hpat1 264513 264536 GGAG_6 24 +hpat1 264545 264564 GGAG_5 20 +hpat1 265005 265016 GCCCCG_2 12 +hpat1 265567 265584 AAT_6 18 +hpat1 265803 265817 AAC_5 15 +hpat1 265866 265877 TAACAA_2 12 +hpat1 265931 265945 AAC_5 15 +hpat1 265994 266005 TAACAA_2 12 +hpat1 266186 266197 CTGGAA_2 12 +hpat1 266759 266778 TAAA_5 20 +hpat1 268395 268406 GGAGGT_2 12 +hpat1 268907 268918 TTTTTT_2 12 +hpat1 269912 269923 ATGGAC_2 12 +hpat1 271171 271182 GATTTA_2 12 +hpat1 271562 271573 TGAAAA_2 12 +hpat1 272103 272114 AGAGAG_2 12 +hpat1 272131 272145 AAAGG_3 15 +hpat1 272146 272160 AGAGG_3 15 +hpat1 272180 272191 AGGAAA_2 12 +hpat1 272192 272209 AGAAAA_3 18 +hpat1 273132 273143 TTACTG_2 12 +hpat1 273765 273794 TTTCTT_5 30 +hpat1 274215 274226 GAGCCT_2 12 +hpat1 274597 274608 GCCTGA_2 12 +hpat1 274850 274861 TGTTCT_2 12 +hpat1 277679 277690 ACACAC_2 12 +hpat1 278427 278438 AAAAAA_2 12 +hpat1 278575 278586 CCTAGT_2 12 +hpat1 279697 279708 TTTTTG_2 12 +hpat1 282512 282523 AAAAAT_2 12 +hpat1 282752 282763 TTGCTT_2 12 +hpat1 283102 283116 AAA_5 15 +hpat1 283586 283597 GGCGGC_2 12 +hpat1 283666 283677 CGGCGG_2 12 +hpat1 286603 286614 TGACTC_2 12 +hpat1 287369 287380 ACCTCC_2 12 +hpat1 288276 288287 AGAAAC_2 12 +hpat1 290125 290139 AAA_5 15 +hpat1 291852 291863 TTTTTT_2 12 +hpat1 292027 292038 TTTTTT_2 12 +hpat1 292210 292227 TTT_6 18 +hpat1 292583 292594 TTTTCT_2 12 +hpat1 292687 292698 TCTTTC_2 12 +hpat1 292830 292844 ATTTT_3 15 +hpat1 293586 293597 TTGAGG_2 12 +hpat1 293663 293682 AAAAT_4 20 +hpat1 294172 294183 TCTGCC_2 12 +hpat1 296514 296531 TTT_6 18 +hpat1 297142 297162 ATT_7 21 +hpat1 298177 298196 CCTC_5 20 +hpat1 298501 298512 TAATTT_2 12 +hpat1 298885 298896 CATCCA_2 12 +hpat1 299051 299062 TTTTTC_2 12 +hpat1 299063 299077 TTT_5 15 +hpat1 300065 300076 CCTCAA_2 12 +hpat1 300704 300721 TTT_6 18 +hpat1 301001 301012 TTTGTT_2 12 +hpat1 301468 301479 CCACAC_2 12 +hpat1 301529 301558 TAT_10 30 +hpat1 302529 302540 TTTTTT_2 12 +hpat1 303598 303609 AAAAAA_2 12 +hpat1 303764 303775 AAAAAT_2 12 +hpat1 304750 304761 AAAAAA_2 12 +hpat1 305047 305058 AAAAAA_2 12 +hpat1 305434 305465 CACA_8 32 +hpat1 305466 305477 CAAACA_2 12 +hpat1 306054 306065 AAAAAA_2 12 +hpat1 306497 306508 TGTTGG_2 12 +hpat1 307067 307078 AAAAAA_2 12 +hpat1 307299 307310 CAGCTC_2 12 +hpat1 308588 308607 TATT_5 20 +hpat1 309049 309060 AGCAGC_2 12 +hpat1 309969 309980 CCACCC_2 12 +hpat1 311300 311311 GAGGGG_2 12 +hpat1 311654 311665 CCCCCA_2 12 +hpat1 312004 312015 GCGGCT_2 12 +hpat1 312356 312373 GCC_6 18 +hpat1 312410 312421 GAGGAG_2 12 +hpat1 314011 314022 CCCTGT_2 12 +hpat1 314055 314069 GCCCC_3 15 +hpat1 314319 314336 TTT_6 18 +hpat1 314344 314355 AACAAC_2 12 +hpat1 315088 315099 ATAATA_2 12 +hpat1 315897 315908 CAGGCC_2 12 +hpat1 317487 317498 AAAAAA_2 12 +hpat1 319116 319127 TCTCTC_2 12 +hpat1 321249 321263 TTTTG_3 15 +hpat1 321264 321275 TTTTTG_2 12 +hpat1 321968 321985 TTC_6 18 +hpat1 321986 322033 CTT_16 48 +hpat1 322044 322055 TTCTTC_2 12 +hpat1 322062 322073 TTCTTC_2 12 +hpat1 322074 322085 CTCTTC_2 12 +hpat1 322086 322100 TTC_5 15 +hpat1 322102 322122 TCT_7 21 +hpat1 322123 322140 CCT_6 18 +hpat1 322154 322168 TTC_5 15 +hpat1 323618 323641 TCTC_6 24 +hpat1 323657 323674 AGAGAG_3 18 +hpat1 323766 323777 ACCATC_2 12 +hpat1 323846 323857 TCCCCC_2 12 +hpat1 324349 324384 TGTG_9 36 +hpat1 324773 324784 TTGTTG_2 12 +hpat1 325310 325321 GGAGGT_2 12 +hpat1 325761 325772 TTTTTT_2 12 +hpat1 325922 325936 TTT_5 15 +hpat1 325995 326018 TTCT_6 24 +hpat1 326132 326143 GCCTCA_2 12 +hpat1 326428 326439 ATAACA_2 12 +hpat1 326882 326901 CACA_5 20 +hpat1 328252 328263 ATATGA_2 12 +hpat1 329377 329396 TCTC_5 20 +hpat1 329866 329883 AAA_6 18 +hpat1 330393 330404 CTTCCC_2 12 +hpat1 331403 331414 CACACA_2 12 +hpat1 331418 331445 ACAC_7 28 +hpat1 331912 331923 AAAAAT_2 12 +hpat1 331929 331940 AAAAAG_2 12 +hpat1 332957 332968 GCCCCA_2 12 +hpat1 333162 333173 CACCCC_2 12 +hpat1 334123 334134 TTGTTG_2 12 +hpat1 334268 334329 GT_31 62 +hpat1 334655 334666 AAAAAA_2 12 +hpat1 335468 335479 CTGCAG_2 12 +hpat1 335608 335619 GGCCCT_2 12 +hpat1 335804 335815 TTGTAT_2 12 +hpat1 336042 336053 GAGGCT_2 12 +hpat1 337163 337174 TAAAAA_2 12 +hpat1 339091 339102 GGTGAG_2 12 +hpat1 340801 340812 TTTTTT_2 12 +hpat1 341153 341170 TTTTTA_3 18 +hpat1 342133 342147 AAA_5 15 +hpat1 343753 343764 GGAGGT_2 12 +hpat1 344175 344186 AAAATT_2 12 +hpat1 344342 344366 TTTTC_5 25 +hpat1 344367 344384 TTT_6 18 +hpat1 344599 344610 GGCCTC_2 12 +hpat1 347339 347350 ACACAG_2 12 +hpat1 347894 347905 GGAGGT_2 12 +hpat1 347972 347986 AAA_5 15 +hpat1 348739 348766 ATTT_7 28 +hpat1 348822 348833 ACCTCT_2 12 +hpat1 349404 349415 CCCCTG_2 12 +hpat1 350549 350563 AAA_5 15 +hpat1 351013 351024 CACATG_2 12 +hpat1 352174 352193 AAAG_5 20 +hpat1 353654 353665 TCTCTC_2 12 +hpat1 354071 354088 TTT_6 18 +hpat1 356742 356753 AGATGG_2 12 +hpat1 357237 357248 AATTCA_2 12 +hpat1 357793 357804 CCACCC_2 12 +hpat1 358582 358593 GTGAGA_2 12 +hpat1 359129 359148 AAAAG_4 20 +hpat1 359807 359826 TTAT_5 20 +hpat1 360492 360506 AAC_5 15 +hpat1 360640 360651 AGAGCA_2 12 +hpat1 360676 360687 AACAAC_2 12 +hpat1 360993 361004 AAAGAA_2 12 +hpat1 362642 362653 CTCTTC_2 12 +hpat1 362938 362952 TTT_5 15 +hpat1 363151 363162 GATCTT_2 12 +hpat1 363465 363479 TTT_5 15 +hpat1 364474 364488 TTATT_3 15 +hpat1 364493 364507 TTT_5 15 +hpat1 365380 365391 GGAGGT_2 12 +hpat1 366470 366484 AAA_5 15 +hpat1 367830 367841 GGGGTG_2 12 +hpat1 367885 367912 TGTG_7 28 +hpat1 367918 367929 GCGCGC_2 12 +hpat1 369146 369157 ACACAC_2 12 +hpat1 369223 369234 TTGTTT_2 12 +hpat1 370082 370093 ATTAGG_2 12 +hpat1 370892 370903 TTATTT_2 12 +hpat1 371203 371217 TTT_5 15 +hpat1 371649 371663 TTT_5 15 +hpat1 372440 372451 ACCTCC_2 12 +hpat1 373342 373356 AAA_5 15 +hpat1 373851 373862 GTTGGA_2 12 +hpat1 376041 376052 GGAGGT_2 12 +hpat1 377249 377260 CCTGAG_2 12 +hpat1 377813 377824 AAAAAA_2 12 +hpat1 378349 378360 TTTTTT_2 12 +hpat1 379129 379140 TTTTTT_2 12 +hpat1 379796 379807 TTTTCT_2 12 +hpat1 379824 379838 TTT_5 15 +hpat1 379902 379913 ACCTCC_2 12 +hpat1 380591 380602 AAAAAA_2 12 +hpat1 380955 380969 TTT_5 15 +hpat1 384331 384342 AAAAAA_2 12 +hpat1 384768 384779 TTTTGT_2 12 +hpat1 384884 384895 CTTCTG_2 12 +hpat1 386748 386759 CTGCAG_2 12 +hpat1 387480 387494 AAA_5 15 +hpat1 387951 387962 TGGGGG_2 12 +hpat1 388197 388208 GGAGGT_2 12 +hpat1 390061 390072 AATATA_2 12 +hpat1 390511 390522 AAAAAA_2 12 +hpat1 390939 390974 CACA_9 36 +hpat1 391185 391199 AAAAC_3 15 +hpat1 391213 391224 AACAAC_2 12 +hpat1 391730 391741 TTTTTT_2 12 +hpat1 393018 393029 GGCAGG_2 12 +hpat1 393263 393274 TGGAGC_2 12 +hpat1 393714 393725 GCTCCT_2 12 +hpat1 393745 393759 GCCCC_3 15 +hpat1 393907 393918 GCCCCG_2 12 +hpat1 394078 394089 CCGCCG_2 12 +hpat1 394172 394183 CACTTT_2 12 +hpat1 395341 395352 TTTTTT_2 12 +hpat1 395519 395530 TGGGAA_2 12 +hpat1 398200 398211 TTTTTT_2 12 +hpat1 399192 399203 AACAAC_2 12 +hpat1 399363 399374 TTTCCT_2 12 +hpat1 399446 399457 ACTGGC_2 12 +hpat1 399792 399806 AAA_5 15 +hpat1 399965 399976 AAAAAA_2 12 +hpat1 401245 401256 AAAAAC_2 12 +hpat1 402032 402049 TTT_6 18 +hpat1 403273 403300 TGTG_7 28 +hpat1 405046 405057 GACCCT_2 12 +hpat1 406470 406481 CCACCT_2 12 +hpat1 406635 406646 CCCCCA_2 12 +hpat1 406676 406687 CCCCAT_2 12 +hpat1 406729 406740 CCCCCA_2 12 +hpat1 406946 406957 AGCAGC_2 12 +hpat1 408180 408194 TCCCC_3 15 +hpat1 408399 408410 TTTTTT_2 12 +hpat1 409295 409306 CGGAGG_2 12 +hpat1 409374 409385 ATATAT_2 12 +hpat1 411079 411090 TTTTTT_2 12 +hpat1 411698 411715 TTT_6 18 +hpat1 411778 411789 ACCTCC_2 12 +hpat1 412137 412148 ATTTTT_2 12 +hpat1 413750 413761 CCCAGC_2 12 +hpat1 415300 415314 TTT_5 15 +hpat1 415761 415772 CAGAGG_2 12 +hpat1 416538 416549 CCACAT_2 12 +hpat1 418814 418825 CAGGGG_2 12 +hpat1 422182 422193 GAAACA_2 12 +hpat1 423212 423223 AAATAA_2 12 +hpat1 424001 424012 GTCTAG_2 12 +hpat1 424336 424347 GCCCAG_2 12 +hpat1 424668 424679 CAGCTG_2 12 +hpat1 425324 425335 GTCACA_2 12 +hpat1 425542 425553 CTACTC_2 12 +hpat1 427055 427066 TGAGGC_2 12 +hpat1 428931 428942 GAGGCA_2 12 +hpat1 429287 429298 ATAAAA_2 12 +hpat1 430039 430050 ACACAC_2 12 +hpat1 430204 430218 AAA_5 15 +hpat1 430892 430903 AAAAAC_2 12 +hpat1 433197 433214 TTT_6 18 +hpat1 433986 433997 CATTGA_2 12 +hpat1 434454 434465 GTTGTT_2 12 +hpat1 434763 434777 AAA_5 15 +hpat1 434915 434932 TTT_6 18 +hpat1 435226 435243 TTT_6 18 +hpat1 436225 436239 TTT_5 15 +hpat1 436387 436401 TTT_5 15 +hpat1 437626 437645 AAAT_5 20 +hpat1 438925 438936 AAAAAC_2 12 +hpat1 439559 439573 AAC_5 15 +hpat1 439700 439711 ACCTCC_2 12 +hpat1 440311 440325 AAA_5 15 +hpat1 440725 440748 ATT_8 24 +hpat1 440749 440760 TTATTT_2 12 +hpat1 441709 441723 AAAAT_3 15 +hpat1 442019 442036 AAAATA_3 18 +hpat1 442318 442329 CAAAAA_2 12 +hpat1 442719 442730 ACCTCC_2 12 +hpat1 443008 443022 TTT_5 15 +hpat1 443088 443099 ACCTCC_2 12 +hpat1 444386 444400 TTT_5 15 +hpat1 445705 445716 TTATTT_2 12 +hpat1 446505 446519 AAA_5 15 +hpat1 446850 446861 AACAAA_2 12 +hpat1 447436 447447 TTATTA_2 12 +hpat1 448341 448352 CTGCCC_2 12 +hpat1 448561 448572 TCGGCA_2 12 +hpat1 449223 449234 ATTGTG_2 12 +hpat1 449770 449781 TTTTTT_2 12 +hpat1 451023 451034 TTTGTT_2 12 +hpat1 452536 452547 ATCAGC_2 12 +hpat1 452702 452725 TATA_6 24 +hpat1 453077 453091 TTT_5 15 +hpat1 453851 453862 AAAAAT_2 12 +hpat1 453964 453975 CAGATA_2 12 +hpat1 455184 455195 ATTTAA_2 12 +hpat1 458294 458305 CTGTTG_2 12 +hpat1 459372 459383 AGTCTC_2 12 +hpat1 459470 459481 CCTGCC_2 12 +hpat1 461444 461455 GGAGGT_2 12 +hpat1 461519 461533 AAA_5 15 +hpat1 462041 462052 AGACTA_2 12 +hpat1 462062 462073 CAAAAG_2 12 +hpat1 463723 463734 ACCCAG_2 12 +hpat1 463956 463975 AAACA_4 20 +hpat1 464056 464067 GCATTT_2 12 +hpat1 466294 466317 TGTG_6 24 +hpat1 466327 466338 GTGTGT_2 12 +hpat1 467570 467581 TTTTTT_2 12 +hpat1 468461 468472 ACACAC_2 12 +hpat1 469650 469661 TGGGAA_2 12 +hpat1 470754 470777 TGTG_6 24 +hpat1 471054 471065 GGAGGC_2 12 +hpat1 471166 471221 TA_28 56 +hpat1 471298 471309 TCTCAC_2 12 +hpat1 471602 471613 TTGGAG_2 12 +hpat1 472084 472095 TACACA_2 12 +hpat1 474126 474140 TTT_5 15 +hpat1 476040 476051 TTAAAA_2 12 +hpat1 476070 476081 TCAAAA_2 12 +hpat1 476120 476131 TTTTTT_2 12 +hpat1 476421 476435 TTT_5 15 +hpat1 476497 476511 TTT_5 15 +hpat1 476790 476804 TTT_5 15 +hpat1 476979 476996 AAA_6 18 +hpat1 478010 478033 AAAACA_4 24 +hpat1 478269 478280 TTTTTT_2 12 +hpat1 479363 479374 CCACTG_2 12 +hpat1 480195 480206 CCTCCG_2 12 +hpat1 481379 481390 AAACAG_2 12 +hpat1 484767 484778 TTTTAC_2 12 +hpat1 485404 485415 AACAAA_2 12 +hpat1 485646 485657 CATCGG_2 12 +hpat1 486045 486062 AAA_6 18 +hpat1 487157 487168 TTTTTT_2 12 +hpat1 489258 489269 TCTCAT_2 12 +hpat1 490266 490283 AAAACA_3 18 +hpat1 490694 490705 TCAGCT_2 12 +hpat1 491755 491766 TTTTTT_2 12 +hpat1 492607 492618 CCTGCC_2 12 +hpat1 493273 493284 GGAGGC_2 12 +hpat1 493346 493357 CACACA_2 12 +hpat1 496259 496273 TTT_5 15 +hpat1 497786 497813 ACAC_7 28 +hpat1 498279 498290 TTCTTC_2 12 +hpat1 498874 498885 TATTTC_2 12 +hpat1 498952 498963 CACACA_2 12 +hpat1 499113 499124 AGGTGT_2 12 +hpat1 500427 500446 AAAC_5 20 +hpat1 500448 500459 AAAAAC_2 12 +hpat1 500768 500779 CAGCCT_2 12 +hpat1 501705 501716 CACACA_2 12 +hpat1 501890 501901 AAATGA_2 12 +hpat1 504615 504626 TATTTT_2 12 +hpat1 505628 505639 AAACAA_2 12 +hpat1 506288 506299 AAAGAC_2 12 +hpat1 507516 507527 AGTAAC_2 12 +hpat1 510502 510519 AAA_6 18 +hpat1 510633 510647 AAC_5 15 +hpat1 510704 510715 GAGGCT_2 12 +hpat1 510735 510746 GGAGGT_2 12 +hpat1 511425 511436 ATAAAA_2 12 +hpat1 511729 511743 AAA_5 15 +hpat1 511755 511766 AATAAT_2 12 +hpat1 513045 513056 GAGAGA_2 12 +hpat1 513078 513121 AG_22 44 +hpat1 513354 513365 AAAAAC_2 12 +hpat1 514714 514725 TTTTGT_2 12 +hpat1 515269 515283 TTT_5 15 +hpat1 516547 516561 TTT_5 15 +hpat1 517637 517648 CATGTA_2 12 +hpat1 518248 518259 TTTTTT_2 12 +hpat1 518943 518954 AAAAAC_2 12 +hpat1 519163 519174 TGTTTT_2 12 +hpat1 520951 520965 AAA_5 15 +hpat1 521038 521049 GGAGGT_2 12 +hpat1 521818 521835 AAA_6 18 +hpat1 522338 522349 GAAAAT_2 12 +hpat1 524042 524056 TTT_5 15 +hpat1 526369 526380 TTCACA_2 12 +hpat1 527826 527837 TTTTTA_2 12 +hpat1 528955 528966 CCTGAC_2 12 +hpat1 529165 529176 AACTCC_2 12 +hpat1 529760 529771 AGCGGC_2 12 +hpat1 532566 532585 CTCT_5 20 +hpat1 532765 532779 TAT_5 15 +hpat1 535074 535085 TTTTAT_2 12 +hpat1 535746 535773 AAAG_7 28 +hpat1 535782 535793 AGAGAG_2 12 +hpat1 536150 536161 TTTAGT_2 12 +hpat1 538740 538751 AAATAT_2 12 +hpat1 538773 538792 AAGG_5 20 +hpat1 538800 538811 TTTTTT_2 12 +hpat1 539339 539350 GGAGGT_2 12 +hpat1 540074 540085 AAAAAA_2 12 +hpat1 540498 540509 TGTTTT_2 12 +hpat1 541873 541887 AAATA_3 15 +hpat1 541889 541900 AACAAC_2 12 +hpat1 542948 542959 AAAAAA_2 12 +hpat1 542960 542977 ATATAT_3 18 +hpat1 543137 543148 CAACAA_2 12 +hpat1 543959 543970 GGAGGT_2 12 +hpat1 544033 544050 AAAAAC_3 18 +hpat1 544054 544068 ACC_5 15 +hpat1 544522 544533 TTGCTG_2 12 +hpat1 544658 544669 TTTTTT_2 12 +hpat1 546135 546146 CAAAAA_2 12 +hpat1 546382 546393 TTTTTC_2 12 +hpat1 546493 546504 AGCCTC_2 12 +hpat1 547434 547445 AAATAA_2 12 +hpat1 549626 549637 GAGAGG_2 12 +hpat1 550639 550658 TGTT_5 20 +hpat1 550723 550734 ACCTCC_2 12 +hpat1 551639 551650 TTTTAT_2 12 +hpat1 552257 552280 AAAAAT_4 24 +hpat1 552764 552781 TTA_6 18 +hpat1 552848 552859 ACCTCC_2 12 +hpat1 556060 556071 GGTTTT_2 12 +hpat1 556296 556310 TTT_5 15 +hpat1 556975 557006 AAAT_8 32 +hpat1 557124 557138 TTT_5 15 +hpat1 558010 558021 TGGCTC_2 12 +hpat1 558471 558482 GATCTG_2 12 +hpat1 562681 562692 CTGTAA_2 12 +hpat1 562697 562708 TTTTCT_2 12 +hpat1 563925 563936 GAGGCT_2 12 +hpat1 564030 564044 AAA_5 15 +hpat1 564727 564758 ACAC_8 32 +hpat1 565343 565354 CATGTG_2 12 +hpat1 565426 565437 TTCTAG_2 12 +hpat1 566572 566583 AGGAGA_2 12 +hpat1 566984 566995 AAAACA_2 12 +hpat1 569331 569342 GGAGGT_2 12 +hpat1 569405 569416 AAAAAT_2 12 +hpat1 570032 570043 TTTTTT_2 12 +hpat1 570541 570558 AAT_6 18 +hpat1 571280 571291 TGTATA_2 12 +hpat1 571318 571329 TGTGTG_2 12 +hpat1 572152 572163 TTATTA_2 12 +hpat1 573516 573530 TTG_5 15 +hpat1 573851 573862 TTTTTT_2 12 +hpat1 575452 575471 AATTA_4 20 +hpat1 575472 575483 AATTTT_2 12 +hpat1 575669 575680 ATTTTT_2 12 +hpat1 575802 575813 ATTTTT_2 12 +hpat1 575871 575894 ACAC_6 24 +hpat1 577212 577226 TTT_5 15 +hpat1 577377 577388 TTTGTA_2 12 +hpat1 577977 577991 TTGGT_3 15 +hpat1 578002 578013 CCTTTC_2 12 +hpat1 578512 578523 TTTTTT_2 12 +hpat1 578671 578702 TATA_8 32 +hpat1 578703 578717 TTT_5 15 +hpat1 578849 578866 TTT_6 18 +hpat1 579478 579489 AGAGAG_2 12 +hpat1 579493 579504 GGGTCT_2 12 +hpat1 580329 580340 TTTTTA_2 12 +hpat1 580420 580431 ACCTCC_2 12 +hpat1 580977 580988 AAAAAA_2 12 +hpat1 581225 581242 TTA_6 18 +hpat1 581452 581463 CAGGGG_2 12 +hpat1 581509 581520 GGGTGG_2 12 +hpat1 582118 582141 AAAACA_4 24 +hpat1 582142 582156 AAACA_3 15 +hpat1 584746 584763 TTT_6 18 +hpat1 585485 585496 GAGGCT_2 12 +hpat1 587188 587199 GGAGGT_2 12 +hpat1 587261 587275 AAA_5 15 +hpat1 588890 588901 CAGCCC_2 12 +hpat1 589708 589719 CCCCAC_2 12 +hpat1 589883 589894 CACACT_2 12 +hpat1 591642 591653 CCAGGT_2 12 +hpat1 591776 591787 GGGCTT_2 12 +hpat1 591897 591908 CAGGGA_2 12 +hpat1 592321 592332 GGAGGC_2 12 +hpat1 592395 592412 AAA_6 18 +hpat1 593794 593805 TCATCT_2 12 +hpat1 595349 595360 CGGCGG_2 12 +hpat1 595567 595578 TCCCGC_2 12 +hpat1 595602 595613 CACCAC_2 12 +hpat1 595622 595636 CGC_5 15 +hpat1 595665 595679 GCCGC_3 15 +hpat1 595738 595749 TCCTCG_2 12 +hpat1 597756 597767 TGAGAC_2 12 +hpat1 599394 599405 GTGTGC_2 12 +hpat1 600006 600025 TCTC_5 20 +hpat1 600026 600037 TATATA_2 12 +hpat1 600041 600052 ATATAT_2 12 +hpat1 600118 600129 TATATA_2 12 +hpat1 601868 601882 TTT_5 15 +hpat1 603188 603199 GAAGTG_2 12 +hpat1 608985 608996 GCTGTG_2 12 +hpat1 610192 610203 TATCTC_2 12 +hpat1 612381 612392 TCACCA_2 12 +hpat1 612521 612535 CTTTT_3 15 +hpat1 613446 613457 CCATCC_2 12 +hpat1 613964 613975 TTCTTG_2 12 +hpat1 615611 615622 AGAAGG_2 12 +hpat1 615632 615643 AAGAAG_2 12 +hpat1 617678 617697 TTTTG_4 20 +hpat1 620321 620332 GCCAGC_2 12 +hpat1 620338 620349 GGGGTG_2 12 +hpat1 621050 621061 AGGGCC_2 12 +hpat1 621851 621862 TCTCTC_2 12 +hpat1 622005 622016 GATTTT_2 12 +hpat1 622557 622571 ACC_5 15 +hpat1 622586 622606 CAC_7 21 +hpat1 623139 623150 ACACAA_2 12 +hpat1 623378 623389 TGGACA_2 12 +hpat1 623706 623723 AAATAA_3 18 +hpat1 624013 624030 AAA_6 18 +hpat1 624648 624662 TTT_5 15 +hpat1 624724 624735 ACCTCC_2 12 +hpat1 624982 624993 TTTTTT_2 12 +hpat1 625129 625146 TTTTAT_3 18 +hpat1 625595 625606 AGCCAG_2 12 +hpat1 627030 627041 GAGGCT_2 12 +hpat1 627187 627198 AATAAC_2 12 +hpat1 629078 629092 TGA_5 15 +hpat1 631394 631405 AACAAC_2 12 +hpat1 631429 631443 AAA_5 15 +hpat1 632732 632743 GTGGGG_2 12 +hpat1 633722 633733 ACTCTC_2 12 +hpat1 634319 634330 CTTCCT_2 12 +hpat1 634612 634623 TCCTTG_2 12 +hpat1 635904 635918 AAA_5 15 +hpat1 637886 637900 AAA_5 15 +hpat1 639391 639402 CGCCGC_2 12 +hpat1 639742 639759 GCGGGG_3 18 +hpat1 640687 640698 CCTTTC_2 12 +hpat1 642772 642783 AAAAAA_2 12 +hpat1 646664 646681 AAA_6 18 +hpat1 649141 649152 AGCTGG_2 12 +hpat1 649225 649236 GTGTGT_2 12 +hpat1 649745 649759 CCGGG_3 15 +hpat1 649865 649876 GCGAGG_2 12 +hpat1 650432 650443 CCGCCC_2 12 +hpat1 650444 650455 CGCCGC_2 12 +hpat1 651677 651688 CCCCTC_2 12 +hpat1 651819 651830 TGCCTC_2 12 +hpat1 652399 652410 GATAGT_2 12 +hpat1 652602 652613 CTCCTT_2 12 +hpat1 653054 653065 GGAAGG_2 12 +hpat1 655086 655103 TACTGC_3 18 +hpat1 655717 655728 AGCCTC_2 12 +hpat1 656009 656020 CCTCCC_2 12 +hpat1 657238 657249 AGGCCA_2 12 +hpat1 657509 657520 TTGGAC_2 12 +hpat1 657610 657621 TGGACC_2 12 +hpat1 658606 658633 GTGT_7 28 +hpat1 660059 660070 GTGTCA_2 12 +hpat1 660332 660343 GCTGTA_2 12 +hpat1 660404 660415 CTCTCT_2 12 +hpat1 660566 660577 TCTCTC_2 12 +hpat1 660592 660619 TCTC_7 28 +hpat1 660621 660648 CACA_7 28 +hpat1 660896 660927 GTGT_8 32 +hpat1 660985 660996 TGGGGA_2 12 +hpat1 661631 661642 CCCCCG_2 12 +hpat1 661936 661947 GGCTCG_2 12 +hpat1 661953 661964 GGCGGC_2 12 +hpat1 662189 662200 CAGAGA_2 12 +hpat1 662391 662402 ACACAC_2 12 +hpat1 662617 662628 CCTCTC_2 12 +hpat1 663604 663618 AAA_5 15 +hpat1 663771 663791 AAT_7 21 +hpat1 664081 664092 TTTTTT_2 12 +hpat1 667668 667679 AATGGG_2 12 +hpat1 668025 668036 GTGTAA_2 12 +hpat1 668718 668729 CCATTT_2 12 +hpat1 669900 669914 AAA_5 15 +hpat1 670208 670219 TTTTTA_2 12 +hpat1 671191 671202 GAGGGG_2 12 +hpat1 671869 671886 TACAAA_3 18 +hpat1 671887 671925 TAA_13 39 +hpat1 671964 671975 CTGAGG_2 12 +hpat1 672093 672104 AACAAC_2 12 +hpat1 672105 672116 AAAGAA_2 12 +hpat1 672622 672639 AAA_6 18 +hpat1 675613 675624 AAGTGT_2 12 +hpat1 675731 675742 GGCACA_2 12 +hpat1 676339 676350 ATTTCT_2 12 +hpat1 676352 676363 TTTATT_2 12 +hpat1 677003 677034 GTGT_8 32 +hpat1 677457 677468 AGAAAG_2 12 +hpat1 678388 678399 TGAAAC_2 12 +hpat1 678842 678856 TTCTT_3 15 +hpat1 678858 678869 TTTTTC_2 12 +hpat1 684578 684589 AATAAC_2 12 +hpat1 684953 684964 AGAGCC_2 12 +hpat1 685312 685323 GGAGGT_2 12 +hpat1 686068 686079 CGGGGG_2 12 +hpat1 686825 686842 TTT_6 18 +hpat1 686899 686910 CAGCCT_2 12 +hpat1 687586 687605 TCAA_5 20 +hpat1 687651 687662 AGGGAG_2 12 +hpat1 688067 688078 TCCTGG_2 12 +hpat1 689018 689037 AAAT_5 20 +hpat1 690132 690143 TTTCTT_2 12 +hpat1 690303 690314 AAGAGG_2 12 +hpat1 693707 693718 AGGGGC_2 12 +hpat1 694426 694437 TTTTGT_2 12 +hpat1 694506 694517 CAGCCT_2 12 +hpat1 694598 694609 TTTTTT_2 12 +hpat1 694903 694914 TATTTA_2 12 +hpat1 695265 695276 CAAGGC_2 12 +hpat1 696496 696507 CGCCCC_2 12 +hpat1 696718 696729 CGCCCC_2 12 +hpat1 697067 697078 TGGGGG_2 12 +hpat1 697568 697587 GTGT_5 20 +hpat1 698582 698593 TCTGAT_2 12 +hpat1 698951 698962 AATTGA_2 12 +hpat1 699157 699171 TTT_5 15