Mercurial > repos > fubar > microsatbed

diff test-data/builtinnativetsv_sample @ 11:a633c1c45da3 draft

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author fubar
date Sun, 14 Jul 2024 23:33:49 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/builtinnativetsv_sample	Sun Jul 14 23:33:49 2024 +0000
@@ -0,0 +1,978 @@
+hpat1	507	526	TTTA	4	5	20
+hpat1	1963	1974	CCCCAC	6	2	12
+hpat1	2146	2163	AAAAAC	6	3	18
+hpat1	3236	3247	TTTTTT	6	2	12
+hpat1	4117	4128	GGCAGG	6	2	12
+hpat1	5472	5483	TTTTTG	6	2	12
+hpat1	5584	5595	AGCCCC	6	2	12
+hpat1	7239	7250	GAAAAA	6	2	12
+hpat1	8173	8184	AAAAAA	6	2	12
+hpat1	8275	8302	A	1	28	28
+hpat1	8303	8314	GAGAGA	6	2	12
+hpat1	8744	8755	GGAGGT	6	2	12
+hpat1	8828	8845	AGAAAA	6	3	18
+hpat1	9495	9506	GGAGGT	6	2	12
+hpat1	9571	9595	AAAAC	5	5	25
+hpat1	11623	11634	AGGGAA	6	2	12
+hpat1	11651	11662	AACAAC	6	2	12
+hpat1	12486	12497	CCTCTG	6	2	12
+hpat1	13457	13468	ACCCTA	6	2	12
+hpat1	13471	13488	CCCTAA	6	3	18
+hpat1	13489	13500	CCCCAA	6	2	12
+hpat1	13501	13518	CCCCAG	6	3	18
+hpat1	13523	13546	AACCCT	6	4	24
+hpat1	13559	13582	CCCTAA	6	4	24
+hpat1	13598	13609	ACCCTA	6	2	12
+hpat1	13612	13635	ACCCTA	6	4	24
+hpat1	13641	13658	AACCCC	6	3	18
+hpat1	13659	13670	AACCCT	6	2	12
+hpat1	13691	13708	ACCCTC	6	3	18
+hpat1	13721	13744	AACCCC	6	4	24
+hpat1	13747	13758	CCCAAC	6	2	12
+hpat1	13767	13778	CTCACC	6	2	12
+hpat1	14149	14164	GCCC	4	4	16
+hpat1	14307	14318	GGCGCA	6	2	12
+hpat1	14336	14347	GGCGCA	6	2	12
+hpat1	14384	14395	GGCGCA	6	2	12
+hpat1	14472	14483	GGGGGG	6	2	12
+hpat1	16148	16159	GAGTGG	6	2	12
+hpat1	16547	16558	CTGAGG	6	2	12
+hpat1	17030	17041	CAGGCA	6	2	12
+hpat1	18072	18083	GTCTGG	6	2	12
+hpat1	18120	18131	TCGTCC	6	2	12
+hpat1	18795	18806	GCAGGC	6	2	12
+hpat1	19207	19218	TGCTCC	6	2	12
+hpat1	20148	20159	GGTGGT	6	2	12
+hpat1	22835	22846	GGGAGG	6	2	12
+hpat1	22939	22950	AAGCCA	6	2	12
+hpat1	24658	24669	AAAAAA	6	2	12
+hpat1	25690	25701	ATTCAC	6	2	12
+hpat1	26499	26510	CCCCTG	6	2	12
+hpat1	29330	29341	CCTCCA	6	2	12
+hpat1	30089	30100	CCAGGA	6	2	12
+hpat1	31904	31915	GTGTGT	6	2	12
+hpat1	32448	32459	GGAGGT	6	2	12
+hpat1	32998	33009	TTTTCT	6	2	12
+hpat1	35194	35205	GCCCAG	6	2	12
+hpat1	35991	36002	CTCTCC	6	2	12
+hpat1	36299	36310	TCTCTG	6	2	12
+hpat1	36311	36338	TC	2	14	28
+hpat1	36363	36374	TCTCTC	6	2	12
+hpat1	37142	37153	AAAAAA	6	2	12
+hpat1	37229	37240	ACACAC	6	2	12
+hpat1	38874	38885	AAAAAA	6	2	12
+hpat1	39406	39417	CATGTG	6	2	12
+hpat1	39489	39500	TTCTAG	6	2	12
+hpat1	39620	39642	T	1	23	23
+hpat1	40503	40514	GTACCA	6	2	12
+hpat1	43740	43764	TCCAT	5	5	25
+hpat1	43807	43826	CACTC	5	4	20
+hpat1	43965	43984	TCCAC	5	4	20
+hpat1	44879	44903	TTCCA	5	5	25
+hpat1	45344	45368	TCCAT	5	5	25
+hpat1	45526	45545	CATTC	5	4	20
+hpat1	45554	45573	TCCAT	5	4	20
+hpat1	46948	46967	TCCAT	5	4	20
+hpat1	47107	47131	TTCCA	5	5	25
+hpat1	47141	47160	ATTCC	5	4	20
+hpat1	47303	47322	TCCAC	5	4	20
+hpat1	48673	48692	TCCAT	5	4	20
+hpat1	48806	48825	ATTCC	5	4	20
+hpat1	49681	49700	ATTCC	5	4	20
+hpat1	49856	49875	ATTCC	5	4	20
+hpat1	50315	50334	TCCAC	5	4	20
+hpat1	50775	50794	TCCAT	5	4	20
+hpat1	51153	51172	ATTCC	5	4	20
+hpat1	52508	52519	GCCTTT	6	2	12
+hpat1	53676	53687	TTTCAG	6	2	12
+hpat1	55005	55016	AAAAAC	6	2	12
+hpat1	58746	58757	GCTTAT	6	2	12
+hpat1	59055	59066	TAGAAA	6	2	12
+hpat1	61658	61669	GGAGGT	6	2	12
+hpat1	61733	61747	AAA	3	5	15
+hpat1	62761	62775	AAA	3	5	15
+hpat1	63859	63874	AAAG	4	4	16
+hpat1	65522	65533	TTTTTT	6	2	12
+hpat1	67692	67703	CTCAGA	6	2	12
+hpat1	68526	68537	TGCCTC	6	2	12
+hpat1	68608	68622	TTT	3	5	15
+hpat1	68851	68862	CAGCCT	6	2	12
+hpat1	69176	69187	CCTTAT	6	2	12
+hpat1	72054	72065	CTCTCC	6	2	12
+hpat1	73588	73599	CAAATA	6	2	12
+hpat1	73891	73924	AC	2	17	34
+hpat1	74873	74884	TCTCTT	6	2	12
+hpat1	76181	76192	TTTGTT	6	2	12
+hpat1	77091	77106	ATAC	4	4	16
+hpat1	77427	77441	TTT	3	5	15
+hpat1	78001	78015	TTT	3	5	15
+hpat1	80746	80757	TTTTCA	6	2	12
+hpat1	80794	80805	CTCTCT	6	2	12
+hpat1	81769	81780	CAAAAA	6	2	12
+hpat1	82355	82369	TTT	3	5	15
+hpat1	83934	83945	TAAATG	6	2	12
+hpat1	84620	84631	TCAAAA	6	2	12
+hpat1	86960	86975	TATA	4	4	16
+hpat1	87245	87256	TTTCTG	6	2	12
+hpat1	87483	87494	TTTTCC	6	2	12
+hpat1	87622	87641	TC	2	10	20
+hpat1	87642	87653	TGTGTG	6	2	12
+hpat1	87657	87684	GT	2	14	28
+hpat1	90387	90401	AAA	3	5	15
+hpat1	91598	91609	CTAGAA	6	2	12
+hpat1	92664	92675	AAGAAA	6	2	12
+hpat1	92820	92831	TCAATG	6	2	12
+hpat1	93618	93629	AACAAA	6	2	12
+hpat1	95760	95771	ATCAGT	6	2	12
+hpat1	97920	97931	GTTTTT	6	2	12
+hpat1	98028	98052	T	1	25	25
+hpat1	98115	98126	ACCTCC	6	2	12
+hpat1	100821	100832	CCTGCC	6	2	12
+hpat1	100974	100985	CCCCAC	6	2	12
+hpat1	102825	102836	GGAGTT	6	2	12
+hpat1	103863	103874	CAGAAA	6	2	12
+hpat1	104935	104946	CTATCT	6	2	12
+hpat1	105272	105283	TTCTTT	6	2	12
+hpat1	105982	105993	AAAAAA	6	2	12
+hpat1	106336	106347	CATTAA	6	2	12
+hpat1	108698	108709	AACACA	6	2	12
+hpat1	109407	109421	TTT	3	5	15
+hpat1	109461	109472	AAAACA	6	2	12
+hpat1	109842	109853	AAACAA	6	2	12
+hpat1	109891	109902	TTAAAT	6	2	12
+hpat1	110331	110342	CAGCAA	6	2	12
+hpat1	110481	110492	AAGAAG	6	2	12
+hpat1	111086	111100	TTT	3	5	15
+hpat1	111899	111910	CATGTG	6	2	12
+hpat1	111999	112010	TTTTTT	6	2	12
+hpat1	112079	112090	ACCTCC	6	2	12
+hpat1	112760	112771	AGAAAG	6	2	12
+hpat1	113453	113464	GAAAAA	6	2	12
+hpat1	113543	113563	A	1	21	21
+hpat1	113689	113700	ATGTGT	6	2	12
+hpat1	113844	113855	TTTGTT	6	2	12
+hpat1	119637	119648	TGGTAC	6	2	12
+hpat1	120465	120476	CTAGAA	6	2	12
+hpat1	120548	120559	CACATG	6	2	12
+hpat1	121012	121035	AAAT	4	6	24
+hpat1	124025	124048	TTGT	4	6	24
+hpat1	124049	124066	TGT	3	6	18
+hpat1	124223	124234	TTTTTA	6	2	12
+hpat1	124605	124616	GAAAAA	6	2	12
+hpat1	125716	125727	AAAATT	6	2	12
+hpat1	125753	125764	CTAAAA	6	2	12
+hpat1	125768	125779	CAAAAA	6	2	12
+hpat1	125885	125896	TTTTTT	6	2	12
+hpat1	125906	125923	TTT	3	6	18
+hpat1	126103	126114	ACATAC	6	2	12
+hpat1	127210	127221	TATATA	6	2	12
+hpat1	128149	128164	TTTG	4	4	16
+hpat1	128765	128776	GTATTT	6	2	12
+hpat1	128861	128872	ATTTTC	6	2	12
+hpat1	129323	129334	ACATAT	6	2	12
+hpat1	130114	130125	GTGTTT	6	2	12
+hpat1	131739	131750	TTTGTC	6	2	12
+hpat1	131826	131837	TTCTGA	6	2	12
+hpat1	132617	132628	AGGAAC	6	2	12
+hpat1	134376	134387	AGATTT	6	2	12
+hpat1	135238	135249	ACATAG	6	2	12
+hpat1	135419	135430	CAACTT	6	2	12
+hpat1	136414	136429	CACA	4	4	16
+hpat1	136957	136968	AAAAAG	6	2	12
+hpat1	137030	137041	AAAAAG	6	2	12
+hpat1	137212	137223	GGAGAG	6	2	12
+hpat1	137369	137380	AAACTA	6	2	12
+hpat1	137535	137546	CAAATC	6	2	12
+hpat1	137558	137575	AAA	3	6	18
+hpat1	137727	137738	GAAGTC	6	2	12
+hpat1	138896	138907	AAAAAA	6	2	12
+hpat1	139228	139242	AAA	3	5	15
+hpat1	140264	140275	TGTGTG	6	2	12
+hpat1	140827	140838	TTTTAT	6	2	12
+hpat1	141801	141812	TAATAT	6	2	12
+hpat1	141988	141999	TGTGTG	6	2	12
+hpat1	142002	142017	TATA	4	4	16
+hpat1	143051	143072	TG	2	11	22
+hpat1	144388	144399	AAAAAA	6	2	12
+hpat1	144871	144888	TTG	3	6	18
+hpat1	147608	147619	CTAGAA	6	2	12
+hpat1	148148	148159	AAAAAA	6	2	12
+hpat1	148417	148428	CTCCCT	6	2	12
+hpat1	148859	148870	TAATAA	6	2	12
+hpat1	150186	150217	AC	2	16	32
+hpat1	152016	152027	AAAAAG	6	2	12
+hpat1	152576	152587	TGTGTG	6	2	12
+hpat1	155739	155750	AAGGCA	6	2	12
+hpat1	156308	156325	TTTTAG	6	3	18
+hpat1	157058	157073	TTTA	4	4	16
+hpat1	158960	158971	ACCTAA	6	2	12
+hpat1	159221	159232	TCCCAA	6	2	12
+hpat1	160996	161007	GCTGCC	6	2	12
+hpat1	166906	166925	AATAA	5	4	20
+hpat1	168215	168240	AC	2	13	26
+hpat1	168672	168683	ATTAAC	6	2	12
+hpat1	168738	168767	GAAAA	5	6	30
+hpat1	170405	170416	AAAAAC	6	2	12
+hpat1	171678	171689	AACAAA	6	2	12
+hpat1	171976	171987	AAATCA	6	2	12
+hpat1	173024	173035	ATGGTG	6	2	12
+hpat1	175792	175803	TTCTTT	6	2	12
+hpat1	175804	175818	TTT	3	5	15
+hpat1	176854	176868	TTT	3	5	15
+hpat1	177755	177766	CTGCTT	6	2	12
+hpat1	180030	180047	TTTTTG	6	3	18
+hpat1	180499	180510	CCCACT	6	2	12
+hpat1	180843	180854	ATTTGT	6	2	12
+hpat1	180871	180902	GT	2	16	32
+hpat1	183233	183244	AAATAA	6	2	12
+hpat1	184102	184116	AAT	3	5	15
+hpat1	184259	184282	T	1	24	24
+hpat1	184344	184355	ACCTCC	6	2	12
+hpat1	184870	184885	TCTC	4	4	16
+hpat1	185111	185122	CCCAGG	6	2	12
+hpat1	186379	186390	AGTGGG	6	2	12
+hpat1	186480	186491	ATTCTT	6	2	12
+hpat1	187054	187075	A	1	22	22
+hpat1	188601	188612	TTCTTT	6	2	12
+hpat1	191292	191303	AAAAAA	6	2	12
+hpat1	192318	192329	AAAAAA	6	2	12
+hpat1	192448	192463	TAAA	4	4	16
+hpat1	195173	195184	TGAAAG	6	2	12
+hpat1	198108	198131	T	1	24	24
+hpat1	200074	200088	TTT	3	5	15
+hpat1	202803	202814	ATATGT	6	2	12
+hpat1	202815	202826	ATATAT	6	2	12
+hpat1	202828	202863	TG	2	18	36
+hpat1	202864	202883	TA	2	10	20
+hpat1	203432	203447	TTTG	4	4	16
+hpat1	203519	203530	ACCTCC	6	2	12
+hpat1	206032	206043	ACAAAT	6	2	12
+hpat1	206400	206419	AGGG	4	5	20
+hpat1	206623	206666	GGAA	4	11	44
+hpat1	211255	211266	CAGAAA	6	2	12
+hpat1	213725	213736	AGATAA	6	2	12
+hpat1	217138	217185	AAAT	4	12	48
+hpat1	218421	218432	AAAAAT	6	2	12
+hpat1	218898	218913	TAAA	4	4	16
+hpat1	219257	219274	TTT	3	6	18
+hpat1	222009	222020	AAAAAA	6	2	12
+hpat1	222072	222093	T	1	22	22
+hpat1	222157	222168	GCCTCC	6	2	12
+hpat1	223960	223971	AAAAAA	6	2	12
+hpat1	224548	224559	AACAAC	6	2	12
+hpat1	225191	225208	AAA	3	6	18
+hpat1	225402	225413	AATTAG	6	2	12
+hpat1	225596	225613	AAA	3	6	18
+hpat1	225617	225628	TGACTC	6	2	12
+hpat1	226078	226089	CTGATT	6	2	12
+hpat1	228565	228576	ATAAAA	6	2	12
+hpat1	228923	228940	AAA	3	6	18
+hpat1	230562	230591	TA	2	15	30
+hpat1	230592	230619	GA	2	14	28
+hpat1	232105	232124	CA	2	10	20
+hpat1	232606	232629	AAAAAG	6	4	24
+hpat1	232635	232682	AAGG	4	12	48
+hpat1	233855	233869	AAA	3	5	15
+hpat1	234129	234140	GGAGGT	6	2	12
+hpat1	234204	234215	AAAAAA	6	2	12
+hpat1	234534	234545	AAAAAA	6	2	12
+hpat1	235842	235853	GGAGGT	6	2	12
+hpat1	235922	235937	AAAT	4	4	16
+hpat1	236235	236246	AAACAC	6	2	12
+hpat1	236491	236502	TTCTCT	6	2	12
+hpat1	237108	237147	AC	2	20	40
+hpat1	237543	237558	AAAT	4	4	16
+hpat1	237921	237932	GGAGGT	6	2	12
+hpat1	237998	238009	AAAAAA	6	2	12
+hpat1	239085	239099	TTT	3	5	15
+hpat1	240473	240487	AAA	3	5	15
+hpat1	240934	240959	AT	2	13	26
+hpat1	241171	241182	ATATAT	6	2	12
+hpat1	241668	241687	TTTTG	5	4	20
+hpat1	242103	242118	AGAT	4	4	16
+hpat1	242122	242161	AGAT	4	10	40
+hpat1	243504	243515	GAGAGA	6	2	12
+hpat1	246294	246329	TTTG	4	9	36
+hpat1	246701	246712	TCCTCA	6	2	12
+hpat1	247307	247324	AAA	3	6	18
+hpat1	247883	247894	ATGTTC	6	2	12
+hpat1	248587	248610	GT	2	12	24
+hpat1	248613	248628	GTGT	4	4	16
+hpat1	248666	248677	TGGCAG	6	2	12
+hpat1	250106	250117	CTCAAT	6	2	12
+hpat1	250129	250152	T	1	24	24
+hpat1	250499	250510	AAGAAG	6	2	12
+hpat1	250826	250837	CTCTAC	6	2	12
+hpat1	250951	250970	TAAA	4	5	20
+hpat1	252089	252100	CTCTCT	6	2	12
+hpat1	252706	252717	ATAAAA	6	2	12
+hpat1	252729	252740	AATAAT	6	2	12
+hpat1	253241	253252	CATGTG	6	2	12
+hpat1	254795	254809	TTT	3	5	15
+hpat1	256098	256113	GGAG	4	4	16
+hpat1	256152	256171	AGGG	4	5	20
+hpat1	256552	256587	AC	2	18	36
+hpat1	257215	257226	AAAAAA	6	2	12
+hpat1	257470	257489	TTTTG	5	4	20
+hpat1	259012	259047	AGGG	4	9	36
+hpat1	259068	259079	AAAGAA	6	2	12
+hpat1	259101	259116	AGAA	4	4	16
+hpat1	262098	262109	GGGGTG	6	2	12
+hpat1	262176	262187	TTCTTC	6	2	12
+hpat1	262313	262324	AGGGGC	6	2	12
+hpat1	264201	264224	GGAG	4	6	24
+hpat1	264325	264348	GGAG	4	6	24
+hpat1	264477	264496	GGAG	4	5	20
+hpat1	264513	264536	GGAG	4	6	24
+hpat1	264545	264564	GGAG	4	5	20
+hpat1	264643	264658	GGGA	4	4	16
+hpat1	264660	264675	GGAG	4	4	16
+hpat1	264700	264715	GGAG	4	4	16
+hpat1	265005	265016	GCCCCG	6	2	12
+hpat1	265567	265584	AAT	3	6	18
+hpat1	265803	265817	AAC	3	5	15
+hpat1	265866	265877	TAACAA	6	2	12
+hpat1	265931	265945	AAC	3	5	15
+hpat1	265994	266005	TAACAA	6	2	12
+hpat1	266186	266197	CTGGAA	6	2	12
+hpat1	266759	266778	TAAA	4	5	20
+hpat1	268395	268406	GGAGGT	6	2	12
+hpat1	268907	268918	TTTTTT	6	2	12
+hpat1	269912	269923	ATGGAC	6	2	12
+hpat1	271171	271182	GATTTA	6	2	12
+hpat1	271562	271573	TGAAAA	6	2	12
+hpat1	272103	272114	AGAGAG	6	2	12
+hpat1	272180	272191	AGGAAA	6	2	12
+hpat1	272192	272209	AGAAAA	6	3	18
+hpat1	273132	273143	TTACTG	6	2	12
+hpat1	273507	273536	A	1	30	30
+hpat1	273765	273794	TTTCTT	6	5	30
+hpat1	273795	273815	T	1	21	21
+hpat1	274215	274226	GAGCCT	6	2	12
+hpat1	274597	274608	GCCTGA	6	2	12
+hpat1	274850	274861	TGTTCT	6	2	12
+hpat1	276183	276205	T	1	23	23
+hpat1	277679	277690	ACACAC	6	2	12
+hpat1	278427	278438	AAAAAA	6	2	12
+hpat1	278575	278586	CCTAGT	6	2	12
+hpat1	279697	279708	TTTTTG	6	2	12
+hpat1	282294	282309	AAAG	4	4	16
+hpat1	282512	282523	AAAAAT	6	2	12
+hpat1	282752	282763	TTGCTT	6	2	12
+hpat1	283102	283116	AAA	3	5	15
+hpat1	283586	283597	GGCGGC	6	2	12
+hpat1	283666	283677	CGGCGG	6	2	12
+hpat1	286603	286614	TGACTC	6	2	12
+hpat1	287369	287380	ACCTCC	6	2	12
+hpat1	288276	288287	AGAAAC	6	2	12
+hpat1	290125	290139	AAA	3	5	15
+hpat1	291615	291630	TAAA	4	4	16
+hpat1	291852	291863	TTTTTT	6	2	12
+hpat1	292027	292038	TTTTTT	6	2	12
+hpat1	292194	292209	TTTC	4	4	16
+hpat1	292210	292227	TTT	3	6	18
+hpat1	292583	292594	TTTTCT	6	2	12
+hpat1	292663	292678	TTCC	4	4	16
+hpat1	292687	292698	TCTTTC	6	2	12
+hpat1	293586	293597	TTGAGG	6	2	12
+hpat1	293663	293682	AAAAT	5	4	20
+hpat1	294172	294183	TCTGCC	6	2	12
+hpat1	296514	296531	TTT	3	6	18
+hpat1	297142	297162	ATT	3	7	21
+hpat1	298177	298196	CCTC	4	5	20
+hpat1	298501	298512	TAATTT	6	2	12
+hpat1	298885	298896	CATCCA	6	2	12
+hpat1	299051	299062	TTTTTC	6	2	12
+hpat1	299063	299077	TTT	3	5	15
+hpat1	300065	300076	CCTCAA	6	2	12
+hpat1	300704	300721	TTT	3	6	18
+hpat1	300989	301004	TTTG	4	4	16
+hpat1	301005	301016	TTTTTG	6	2	12
+hpat1	301468	301479	CCACAC	6	2	12
+hpat1	301529	301558	TAT	3	10	30
+hpat1	302529	302540	TTTTTT	6	2	12
+hpat1	303598	303609	AAAAAA	6	2	12
+hpat1	303764	303775	AAAAAT	6	2	12
+hpat1	304750	304761	AAAAAA	6	2	12
+hpat1	305047	305058	AAAAAA	6	2	12
+hpat1	305434	305467	CA	2	17	34
+hpat1	306054	306065	AAAAAA	6	2	12
+hpat1	306497	306508	TGTTGG	6	2	12
+hpat1	307067	307078	AAAAAA	6	2	12
+hpat1	307299	307310	CAGCTC	6	2	12
+hpat1	308588	308607	TATT	4	5	20
+hpat1	309049	309060	AGCAGC	6	2	12
+hpat1	309969	309980	CCACCC	6	2	12
+hpat1	311300	311311	GAGGGG	6	2	12
+hpat1	311654	311665	CCCCCA	6	2	12
+hpat1	312004	312015	GCGGCT	6	2	12
+hpat1	312356	312373	GCC	3	6	18
+hpat1	312410	312421	GAGGAG	6	2	12
+hpat1	314011	314022	CCCTGT	6	2	12
+hpat1	314319	314336	TTT	3	6	18
+hpat1	314344	314355	AACAAC	6	2	12
+hpat1	315088	315099	ATAATA	6	2	12
+hpat1	315897	315908	CAGGCC	6	2	12
+hpat1	317487	317498	AAAAAA	6	2	12
+hpat1	319116	319127	TCTCTC	6	2	12
+hpat1	321259	321276	TTTTGT	6	3	18
+hpat1	321968	321985	TTC	3	6	18
+hpat1	321986	322033	CTT	3	16	48
+hpat1	322044	322055	TTCTTC	6	2	12
+hpat1	322062	322073	TTCTTC	6	2	12
+hpat1	322074	322085	CTCTTC	6	2	12
+hpat1	322086	322100	TTC	3	5	15
+hpat1	322102	322122	TCT	3	7	21
+hpat1	322123	322140	CCT	3	6	18
+hpat1	322154	322168	TTC	3	5	15
+hpat1	323618	323641	TC	2	12	24
+hpat1	323657	323672	AGAG	4	4	16
+hpat1	323766	323777	ACCATC	6	2	12
+hpat1	323846	323857	TCCCCC	6	2	12
+hpat1	324349	324386	TG	2	19	38
+hpat1	324773	324784	TTGTTG	6	2	12
+hpat1	325310	325321	GGAGGT	6	2	12
+hpat1	325761	325772	TTTTTT	6	2	12
+hpat1	325922	325936	TTT	3	5	15
+hpat1	325962	325977	TTTC	4	4	16
+hpat1	325995	326018	TTCT	4	6	24
+hpat1	326132	326143	GCCTCA	6	2	12
+hpat1	326428	326439	ATAACA	6	2	12
+hpat1	326882	326903	CA	2	11	22
+hpat1	328252	328263	ATATGA	6	2	12
+hpat1	328370	328401	T	1	32	32
+hpat1	329377	329396	TC	2	10	20
+hpat1	329866	329883	AAA	3	6	18
+hpat1	330393	330404	CTTCCC	6	2	12
+hpat1	331403	331414	CACACA	6	2	12
+hpat1	331418	331445	AC	2	14	28
+hpat1	331912	331923	AAAAAT	6	2	12
+hpat1	331929	331940	AAAAAG	6	2	12
+hpat1	332957	332968	GCCCCA	6	2	12
+hpat1	333162	333173	CACCCC	6	2	12
+hpat1	334123	334134	TTGTTG	6	2	12
+hpat1	334268	334329	GT	2	31	62
+hpat1	334655	334666	AAAAAA	6	2	12
+hpat1	335468	335479	CTGCAG	6	2	12
+hpat1	335608	335619	GGCCCT	6	2	12
+hpat1	335804	335815	TTGTAT	6	2	12
+hpat1	336042	336053	GAGGCT	6	2	12
+hpat1	336279	336299	A	1	21	21
+hpat1	336448	336474	A	1	27	27
+hpat1	337163	337174	TAAAAA	6	2	12
+hpat1	339091	339102	GGTGAG	6	2	12
+hpat1	340801	340812	TTTTTT	6	2	12
+hpat1	341153	341170	TTTTTA	6	3	18
+hpat1	342133	342147	AAA	3	5	15
+hpat1	343753	343764	GGAGGT	6	2	12
+hpat1	344175	344186	AAAATT	6	2	12
+hpat1	344342	344366	TTTTC	5	5	25
+hpat1	344367	344384	TTT	3	6	18
+hpat1	344599	344610	GGCCTC	6	2	12
+hpat1	345784	345803	A	1	20	20
+hpat1	347339	347350	ACACAG	6	2	12
+hpat1	347894	347905	GGAGGT	6	2	12
+hpat1	347972	347986	AAA	3	5	15
+hpat1	348658	348673	AATG	4	4	16
+hpat1	348739	348766	ATTT	4	7	28
+hpat1	348822	348833	ACCTCT	6	2	12
+hpat1	349404	349415	CCCCTG	6	2	12
+hpat1	350549	350563	AAA	3	5	15
+hpat1	351013	351024	CACATG	6	2	12
+hpat1	351586	351606	T	1	21	21
+hpat1	352174	352193	AAAG	4	5	20
+hpat1	353018	353033	AAAC	4	4	16
+hpat1	353654	353665	TCTCTC	6	2	12
+hpat1	354071	354088	TTT	3	6	18
+hpat1	355441	355464	A	1	24	24
+hpat1	356742	356753	AGATGG	6	2	12
+hpat1	357237	357248	AATTCA	6	2	12
+hpat1	357793	357804	CCACCC	6	2	12
+hpat1	358582	358593	GTGAGA	6	2	12
+hpat1	359129	359148	AAAAG	5	4	20
+hpat1	359151	359166	GGAA	4	4	16
+hpat1	359807	359826	TTAT	4	5	20
+hpat1	360492	360506	AAC	3	5	15
+hpat1	360640	360651	AGAGCA	6	2	12
+hpat1	360676	360687	AACAAC	6	2	12
+hpat1	360993	361004	AAAGAA	6	2	12
+hpat1	361816	361831	AAAC	4	4	16
+hpat1	362642	362653	CTCTTC	6	2	12
+hpat1	362938	362952	TTT	3	5	15
+hpat1	363151	363162	GATCTT	6	2	12
+hpat1	363465	363479	TTT	3	5	15
+hpat1	364493	364507	TTT	3	5	15
+hpat1	365380	365391	GGAGGT	6	2	12
+hpat1	366470	366484	AAA	3	5	15
+hpat1	367830	367841	GGGGTG	6	2	12
+hpat1	367885	367914	TG	2	15	30
+hpat1	367918	367929	GCGCGC	6	2	12
+hpat1	369146	369157	ACACAC	6	2	12
+hpat1	369223	369234	TTGTTT	6	2	12
+hpat1	370082	370093	ATTAGG	6	2	12
+hpat1	370892	370903	TTATTT	6	2	12
+hpat1	371203	371217	TTT	3	5	15
+hpat1	371649	371663	TTT	3	5	15
+hpat1	372440	372451	ACCTCC	6	2	12
+hpat1	373342	373356	AAA	3	5	15
+hpat1	373851	373862	GTTGGA	6	2	12
+hpat1	376041	376052	GGAGGT	6	2	12
+hpat1	376789	376815	A	1	27	27
+hpat1	377249	377260	CCTGAG	6	2	12
+hpat1	377813	377824	AAAAAA	6	2	12
+hpat1	378349	378360	TTTTTT	6	2	12
+hpat1	379129	379140	TTTTTT	6	2	12
+hpat1	379796	379807	TTTTCT	6	2	12
+hpat1	379824	379838	TTT	3	5	15
+hpat1	379902	379913	ACCTCC	6	2	12
+hpat1	380591	380602	AAAAAA	6	2	12
+hpat1	380955	380969	TTT	3	5	15
+hpat1	384331	384342	AAAAAA	6	2	12
+hpat1	384768	384779	TTTTGT	6	2	12
+hpat1	384884	384895	CTTCTG	6	2	12
+hpat1	386748	386759	CTGCAG	6	2	12
+hpat1	387480	387494	AAA	3	5	15
+hpat1	387951	387962	TGGGGG	6	2	12
+hpat1	388197	388208	GGAGGT	6	2	12
+hpat1	388272	388298	A	1	27	27
+hpat1	390061	390072	AATATA	6	2	12
+hpat1	390511	390522	AAAAAA	6	2	12
+hpat1	390939	390974	CA	2	18	36
+hpat1	391213	391224	AACAAC	6	2	12
+hpat1	391730	391741	TTTTTT	6	2	12
+hpat1	392496	392516	A	1	21	21
+hpat1	393018	393029	GGCAGG	6	2	12
+hpat1	393263	393274	TGGAGC	6	2	12
+hpat1	393714	393725	GCTCCT	6	2	12
+hpat1	393907	393918	GCCCCG	6	2	12
+hpat1	394078	394089	CCGCCG	6	2	12
+hpat1	394172	394183	CACTTT	6	2	12
+hpat1	395341	395352	TTTTTT	6	2	12
+hpat1	395519	395530	TGGGAA	6	2	12
+hpat1	396741	396756	TTTA	4	4	16
+hpat1	398200	398211	TTTTTT	6	2	12
+hpat1	399192	399203	AACAAC	6	2	12
+hpat1	399363	399374	TTTCCT	6	2	12
+hpat1	399446	399457	ACTGGC	6	2	12
+hpat1	399792	399806	AAA	3	5	15
+hpat1	399965	399976	AAAAAA	6	2	12
+hpat1	401245	401256	AAAAAC	6	2	12
+hpat1	402032	402049	TTT	3	6	18
+hpat1	403273	403300	TG	2	14	28
+hpat1	405046	405057	GACCCT	6	2	12
+hpat1	406470	406481	CCACCT	6	2	12
+hpat1	406635	406646	CCCCCA	6	2	12
+hpat1	406676	406687	CCCCAT	6	2	12
+hpat1	406729	406740	CCCCCA	6	2	12
+hpat1	406946	406957	AGCAGC	6	2	12
+hpat1	408399	408410	TTTTTT	6	2	12
+hpat1	409295	409306	CGGAGG	6	2	12
+hpat1	409374	409389	ATAT	4	4	16
+hpat1	411079	411090	TTTTTT	6	2	12
+hpat1	411698	411715	TTT	3	6	18
+hpat1	411778	411789	ACCTCC	6	2	12
+hpat1	412137	412148	ATTTTT	6	2	12
+hpat1	412888	412917	T	1	30	30
+hpat1	413750	413761	CCCAGC	6	2	12
+hpat1	415300	415314	TTT	3	5	15
+hpat1	415761	415772	CAGAGG	6	2	12
+hpat1	416538	416549	CCACAT	6	2	12
+hpat1	418814	418825	CAGGGG	6	2	12
+hpat1	422182	422193	GAAACA	6	2	12
+hpat1	423212	423223	AAATAA	6	2	12
+hpat1	424001	424012	GTCTAG	6	2	12
+hpat1	424336	424347	GCCCAG	6	2	12
+hpat1	424668	424679	CAGCTG	6	2	12
+hpat1	425324	425335	GTCACA	6	2	12
+hpat1	425542	425553	CTACTC	6	2	12
+hpat1	427055	427066	TGAGGC	6	2	12
+hpat1	428931	428942	GAGGCA	6	2	12
+hpat1	429287	429298	ATAAAA	6	2	12
+hpat1	430039	430050	ACACAC	6	2	12
+hpat1	430204	430218	AAA	3	5	15
+hpat1	430892	430903	AAAAAC	6	2	12
+hpat1	433017	433040	T	1	24	24
+hpat1	433197	433214	TTT	3	6	18
+hpat1	433986	433997	CATTGA	6	2	12
+hpat1	434454	434465	GTTGTT	6	2	12
+hpat1	434763	434777	AAA	3	5	15
+hpat1	434915	434932	TTT	3	6	18
+hpat1	435226	435243	TTT	3	6	18
+hpat1	435358	435377	A	1	20	20
+hpat1	436225	436239	TTT	3	5	15
+hpat1	436387	436401	TTT	3	5	15
+hpat1	436833	436848	AAAT	4	4	16
+hpat1	437626	437645	AAAT	4	5	20
+hpat1	438925	438936	AAAAAC	6	2	12
+hpat1	439225	439262	A	1	38	38
+hpat1	439559	439573	AAC	3	5	15
+hpat1	439615	439637	T	1	23	23
+hpat1	439700	439711	ACCTCC	6	2	12
+hpat1	440311	440325	AAA	3	5	15
+hpat1	440725	440748	ATT	3	8	24
+hpat1	440749	440760	TTATTT	6	2	12
+hpat1	442019	442036	AAAATA	6	3	18
+hpat1	442318	442329	CAAAAA	6	2	12
+hpat1	442719	442730	ACCTCC	6	2	12
+hpat1	443008	443022	TTT	3	5	15
+hpat1	443088	443099	ACCTCC	6	2	12
+hpat1	443320	443335	TTTA	4	4	16
+hpat1	444386	444400	TTT	3	5	15
+hpat1	445705	445716	TTATTT	6	2	12
+hpat1	445717	445732	ATTT	4	4	16
+hpat1	446505	446519	AAA	3	5	15
+hpat1	446850	446861	AACAAA	6	2	12
+hpat1	447436	447447	TTATTA	6	2	12
+hpat1	448341	448352	CTGCCC	6	2	12
+hpat1	448561	448572	TCGGCA	6	2	12
+hpat1	449223	449234	ATTGTG	6	2	12
+hpat1	449770	449781	TTTTTT	6	2	12
+hpat1	451023	451034	TTTGTT	6	2	12
+hpat1	451475	451490	TGTA	4	4	16
+hpat1	452085	452108	A	1	24	24
+hpat1	452536	452547	ATCAGC	6	2	12
+hpat1	452702	452727	TA	2	13	26
+hpat1	453077	453091	TTT	3	5	15
+hpat1	453851	453862	AAAAAT	6	2	12
+hpat1	453964	453975	CAGATA	6	2	12
+hpat1	455184	455195	ATTTAA	6	2	12
+hpat1	458294	458305	CTGTTG	6	2	12
+hpat1	459372	459383	AGTCTC	6	2	12
+hpat1	459470	459481	CCTGCC	6	2	12
+hpat1	461444	461455	GGAGGT	6	2	12
+hpat1	461519	461533	AAA	3	5	15
+hpat1	462041	462052	AGACTA	6	2	12
+hpat1	462062	462073	CAAAAG	6	2	12
+hpat1	463723	463734	ACCCAG	6	2	12
+hpat1	463956	463975	AAACA	5	4	20
+hpat1	464056	464067	GCATTT	6	2	12
+hpat1	464824	464843	A	1	20	20
+hpat1	466294	466317	TG	2	12	24
+hpat1	466327	466338	GTGTGT	6	2	12
+hpat1	467570	467581	TTTTTT	6	2	12
+hpat1	468461	468472	ACACAC	6	2	12
+hpat1	469650	469661	TGGGAA	6	2	12
+hpat1	470754	470779	TG	2	13	26
+hpat1	471054	471065	GGAGGC	6	2	12
+hpat1	471128	471165	A	1	38	38
+hpat1	471166	471221	TA	2	28	56
+hpat1	471298	471309	TCTCAC	6	2	12
+hpat1	471602	471613	TTGGAG	6	2	12
+hpat1	472084	472095	TACACA	6	2	12
+hpat1	474126	474140	TTT	3	5	15
+hpat1	476040	476051	TTAAAA	6	2	12
+hpat1	476070	476081	TCAAAA	6	2	12
+hpat1	476120	476131	TTTTTT	6	2	12
+hpat1	476421	476435	TTT	3	5	15
+hpat1	476497	476511	TTT	3	5	15
+hpat1	476790	476804	TTT	3	5	15
+hpat1	476979	476996	AAA	3	6	18
+hpat1	478010	478033	AAAACA	6	4	24
+hpat1	478269	478280	TTTTTT	6	2	12
+hpat1	479363	479374	CCACTG	6	2	12
+hpat1	480111	480131	T	1	21	21
+hpat1	480195	480206	CCTCCG	6	2	12
+hpat1	481379	481390	AAACAG	6	2	12
+hpat1	484422	484443	T	1	22	22
+hpat1	484767	484778	TTTTAC	6	2	12
+hpat1	485404	485415	AACAAA	6	2	12
+hpat1	485646	485657	CATCGG	6	2	12
+hpat1	486045	486062	AAA	3	6	18
+hpat1	486722	486743	T	1	22	22
+hpat1	487157	487168	TTTTTT	6	2	12
+hpat1	489258	489269	TCTCAT	6	2	12
+hpat1	490266	490283	AAAACA	6	3	18
+hpat1	490694	490705	TCAGCT	6	2	12
+hpat1	491439	491462	T	1	24	24
+hpat1	491755	491766	TTTTTT	6	2	12
+hpat1	491956	491977	T	1	22	22
+hpat1	492607	492618	CCTGCC	6	2	12
+hpat1	493273	493284	GGAGGC	6	2	12
+hpat1	493346	493357	CACACA	6	2	12
+hpat1	496259	496273	TTT	3	5	15
+hpat1	497786	497813	AC	2	14	28
+hpat1	498279	498290	TTCTTC	6	2	12
+hpat1	498874	498885	TATTTC	6	2	12
+hpat1	498952	498963	CACACA	6	2	12
+hpat1	499113	499124	AGGTGT	6	2	12
+hpat1	500427	500446	AAAC	4	5	20
+hpat1	500448	500459	AAAAAC	6	2	12
+hpat1	500768	500779	CAGCCT	6	2	12
+hpat1	501705	501716	CACACA	6	2	12
+hpat1	501890	501901	AAATGA	6	2	12
+hpat1	504615	504626	TATTTT	6	2	12
+hpat1	504795	504814	T	1	20	20
+hpat1	505013	505033	T	1	21	21
+hpat1	505628	505639	AAACAA	6	2	12
+hpat1	506288	506299	AAAGAC	6	2	12
+hpat1	507516	507527	AGTAAC	6	2	12
+hpat1	508773	508788	TTTA	4	4	16
+hpat1	509939	509961	A	1	23	23
+hpat1	510502	510519	AAA	3	6	18
+hpat1	510633	510647	AAC	3	5	15
+hpat1	510704	510715	GAGGCT	6	2	12
+hpat1	510735	510746	GGAGGT	6	2	12
+hpat1	510788	510808	A	1	21	21
+hpat1	511425	511436	ATAAAA	6	2	12
+hpat1	511729	511743	AAA	3	5	15
+hpat1	511755	511766	AATAAT	6	2	12
+hpat1	511915	511936	A	1	22	22
+hpat1	513045	513060	GAGA	4	4	16
+hpat1	513078	513121	AG	2	22	44
+hpat1	513354	513365	AAAAAC	6	2	12
+hpat1	514714	514725	TTTTGT	6	2	12
+hpat1	515269	515283	TTT	3	5	15
+hpat1	516547	516561	TTT	3	5	15
+hpat1	517637	517648	CATGTA	6	2	12
+hpat1	518248	518259	TTTTTT	6	2	12
+hpat1	518408	518428	T	1	21	21
+hpat1	518943	518954	AAAAAC	6	2	12
+hpat1	519163	519174	TGTTTT	6	2	12
+hpat1	519687	519702	ATAC	4	4	16
+hpat1	520951	520965	AAA	3	5	15
+hpat1	521038	521049	GGAGGT	6	2	12
+hpat1	521113	521144	A	1	32	32
+hpat1	521818	521835	AAA	3	6	18
+hpat1	522338	522349	GAAAAT	6	2	12
+hpat1	524042	524056	TTT	3	5	15
+hpat1	526369	526380	TTCACA	6	2	12
+hpat1	527826	527837	TTTTTA	6	2	12
+hpat1	528955	528966	CCTGAC	6	2	12
+hpat1	529165	529176	AACTCC	6	2	12
+hpat1	529760	529771	AGCGGC	6	2	12
+hpat1	532566	532585	CT	2	10	20
+hpat1	532765	532779	TAT	3	5	15
+hpat1	534656	534681	T	1	26	26
+hpat1	535074	535085	TTTTAT	6	2	12
+hpat1	535729	535744	GAAA	4	4	16
+hpat1	535746	535773	AAAG	4	7	28
+hpat1	535782	535793	AGAGAG	6	2	12
+hpat1	536150	536161	TTTAGT	6	2	12
+hpat1	538740	538751	AAATAT	6	2	12
+hpat1	538773	538792	AAGG	4	5	20
+hpat1	538800	538811	TTTTTT	6	2	12
+hpat1	539339	539350	GGAGGT	6	2	12
+hpat1	539414	539433	A	1	20	20
+hpat1	540074	540085	AAAAAA	6	2	12
+hpat1	540498	540509	TGTTTT	6	2	12
+hpat1	541889	541900	AACAAC	6	2	12
+hpat1	542948	542959	AAAAAA	6	2	12
+hpat1	542960	542975	ATAT	4	4	16
+hpat1	543137	543148	CAACAA	6	2	12
+hpat1	543959	543970	GGAGGT	6	2	12
+hpat1	544033	544050	AAAAAC	6	3	18
+hpat1	544054	544068	ACC	3	5	15
+hpat1	544522	544533	TTGCTG	6	2	12
+hpat1	544658	544669	TTTTTT	6	2	12
+hpat1	546135	546146	CAAAAA	6	2	12
+hpat1	546382	546393	TTTTTC	6	2	12
+hpat1	546493	546504	AGCCTC	6	2	12
+hpat1	547434	547445	AAATAA	6	2	12
+hpat1	549626	549637	GAGAGG	6	2	12
+hpat1	550639	550658	TGTT	4	5	20
+hpat1	550723	550734	ACCTCC	6	2	12
+hpat1	551639	551650	TTTTAT	6	2	12
+hpat1	552257	552280	AAAAAT	6	4	24
+hpat1	552764	552781	TTA	3	6	18
+hpat1	552848	552859	ACCTCC	6	2	12
+hpat1	556060	556071	GGTTTT	6	2	12
+hpat1	556296	556310	TTT	3	5	15
+hpat1	556975	557006	AAAT	4	8	32
+hpat1	557124	557138	TTT	3	5	15
+hpat1	558010	558021	TGGCTC	6	2	12
+hpat1	558471	558482	GATCTG	6	2	12
+hpat1	562681	562692	CTGTAA	6	2	12
+hpat1	562697	562708	TTTTCT	6	2	12
+hpat1	563925	563936	GAGGCT	6	2	12
+hpat1	564030	564044	AAA	3	5	15
+hpat1	564727	564758	AC	2	16	32
+hpat1	565343	565354	CATGTG	6	2	12
+hpat1	565426	565437	TTCTAG	6	2	12
+hpat1	566572	566583	AGGAGA	6	2	12
+hpat1	566984	566995	AAAACA	6	2	12
+hpat1	568068	568091	T	1	24	24
+hpat1	569331	569342	GGAGGT	6	2	12
+hpat1	569405	569416	AAAAAT	6	2	12
+hpat1	570032	570043	TTTTTT	6	2	12
+hpat1	570541	570558	AAT	3	6	18
+hpat1	571280	571291	TGTATA	6	2	12
+hpat1	571318	571333	TGTG	4	4	16
+hpat1	571613	571633	T	1	21	21
+hpat1	572152	572163	TTATTA	6	2	12
+hpat1	573516	573530	TTG	3	5	15
+hpat1	573851	573862	TTTTTT	6	2	12
+hpat1	575452	575471	AATTA	5	4	20
+hpat1	575472	575483	AATTTT	6	2	12
+hpat1	575669	575680	ATTTTT	6	2	12
+hpat1	575802	575813	ATTTTT	6	2	12
+hpat1	575871	575894	AC	2	12	24
+hpat1	577212	577226	TTT	3	5	15
+hpat1	577377	577388	TTTGTA	6	2	12
+hpat1	578002	578013	CCTTTC	6	2	12
+hpat1	578512	578523	TTTTTT	6	2	12
+hpat1	578671	578702	TA	2	16	32
+hpat1	578703	578717	TTT	3	5	15
+hpat1	578849	578866	TTT	3	6	18
+hpat1	579478	579489	AGAGAG	6	2	12
+hpat1	579493	579504	GGGTCT	6	2	12
+hpat1	580201	580220	A	1	20	20
+hpat1	580329	580340	TTTTTA	6	2	12
+hpat1	580420	580431	ACCTCC	6	2	12
+hpat1	580977	580988	AAAAAA	6	2	12
+hpat1	581225	581242	TTA	3	6	18
+hpat1	581452	581463	CAGGGG	6	2	12
+hpat1	581509	581520	GGGTGG	6	2	12
+hpat1	582118	582141	AAAACA	6	4	24
+hpat1	583541	583556	TGTA	4	4	16
+hpat1	584746	584763	TTT	3	6	18
+hpat1	585485	585496	GAGGCT	6	2	12
+hpat1	587188	587199	GGAGGT	6	2	12
+hpat1	587261	587275	AAA	3	5	15
+hpat1	588890	588901	CAGCCC	6	2	12
+hpat1	589708	589719	CCCCAC	6	2	12
+hpat1	589883	589894	CACACT	6	2	12
+hpat1	591642	591653	CCAGGT	6	2	12
+hpat1	591776	591787	GGGCTT	6	2	12
+hpat1	591897	591908	CAGGGA	6	2	12
+hpat1	592321	592332	GGAGGC	6	2	12
+hpat1	592395	592412	AAA	3	6	18
+hpat1	593794	593805	TCATCT	6	2	12
+hpat1	595349	595360	CGGCGG	6	2	12
+hpat1	595567	595578	TCCCGC	6	2	12
+hpat1	595602	595613	CACCAC	6	2	12
+hpat1	595622	595636	CGC	3	5	15
+hpat1	595738	595749	TCCTCG	6	2	12
+hpat1	597756	597767	TGAGAC	6	2	12
+hpat1	599394	599405	GTGTGC	6	2	12
+hpat1	600006	600025	TC	2	10	20
+hpat1	600026	600037	TATATA	6	2	12
+hpat1	600041	600052	ATATAT	6	2	12
+hpat1	600118	600129	TATATA	6	2	12
+hpat1	601868	601882	TTT	3	5	15
+hpat1	603188	603199	GAAGTG	6	2	12
+hpat1	608484	608499	TGAA	4	4	16
+hpat1	608985	608996	GCTGTG	6	2	12
+hpat1	609780	609795	AAAC	4	4	16
+hpat1	610192	610203	TATCTC	6	2	12
+hpat1	612381	612392	TCACCA	6	2	12
+hpat1	613446	613457	CCATCC	6	2	12
+hpat1	613964	613975	TTCTTG	6	2	12
+hpat1	615611	615622	AGAAGG	6	2	12
+hpat1	615632	615643	AAGAAG	6	2	12
+hpat1	616140	616161	A	1	22	22
+hpat1	617678	617697	TTTTG	5	4	20
+hpat1	620321	620332	GCCAGC	6	2	12
+hpat1	620338	620349	GGGGTG	6	2	12
+hpat1	621050	621061	AGGGCC	6	2	12
+hpat1	621851	621862	TCTCTC	6	2	12
+hpat1	622005	622016	GATTTT	6	2	12
+hpat1	622557	622571	ACC	3	5	15
+hpat1	622586	622606	CAC	3	7	21
+hpat1	623139	623150	ACACAA	6	2	12
+hpat1	623378	623389	TGGACA	6	2	12
+hpat1	623706	623723	AAATAA	6	3	18
+hpat1	624013	624030	AAA	3	6	18
+hpat1	624648	624662	TTT	3	5	15
+hpat1	624724	624735	ACCTCC	6	2	12
+hpat1	624982	624993	TTTTTT	6	2	12
+hpat1	625129	625146	TTTTAT	6	3	18
+hpat1	625595	625606	AGCCAG	6	2	12
+hpat1	627030	627041	GAGGCT	6	2	12
+hpat1	627187	627198	AATAAC	6	2	12
+hpat1	629078	629092	TGA	3	5	15
+hpat1	631394	631405	AACAAC	6	2	12
+hpat1	631429	631443	AAA	3	5	15
+hpat1	632704	632731	A	1	28	28
+hpat1	632732	632743	GTGGGG	6	2	12
+hpat1	633722	633733	ACTCTC	6	2	12
+hpat1	634319	634330	CTTCCT	6	2	12
+hpat1	634612	634623	TCCTTG	6	2	12
+hpat1	635904	635918	AAA	3	5	15
+hpat1	637886	637900	AAA	3	5	15
+hpat1	639391	639402	CGCCGC	6	2	12
+hpat1	639742	639759	GCGGGG	6	3	18
+hpat1	640687	640698	CCTTTC	6	2	12
+hpat1	642772	642783	AAAAAA	6	2	12
+hpat1	646664	646681	AAA	3	6	18
+hpat1	649141	649152	AGCTGG	6	2	12
+hpat1	649225	649236	GTGTGT	6	2	12
+hpat1	649865	649876	GCGAGG	6	2	12
+hpat1	650432	650443	CCGCCC	6	2	12
+hpat1	650444	650455	CGCCGC	6	2	12
+hpat1	651677	651688	CCCCTC	6	2	12
+hpat1	651819	651830	TGCCTC	6	2	12
+hpat1	652399	652410	GATAGT	6	2	12
+hpat1	652602	652613	CTCCTT	6	2	12
+hpat1	653054	653065	GGAAGG	6	2	12
+hpat1	655086	655103	TACTGC	6	3	18
+hpat1	655717	655728	AGCCTC	6	2	12
+hpat1	656009	656020	CCTCCC	6	2	12
+hpat1	657238	657249	AGGCCA	6	2	12
+hpat1	657509	657520	TTGGAC	6	2	12
+hpat1	657610	657621	TGGACC	6	2	12
+hpat1	658606	658633	GT	2	14	28
+hpat1	658934	658949	CCCT	4	4	16
+hpat1	660059	660070	GTGTCA	6	2	12
+hpat1	660332	660343	GCTGTA	6	2	12
+hpat1	660404	660415	CTCTCT	6	2	12
+hpat1	660566	660577	TCTCTC	6	2	12
+hpat1	660592	660621	TC	2	15	30
+hpat1	660622	660647	AC	2	13	26
+hpat1	660896	660927	GT	2	16	32
+hpat1	660985	660996	TGGGGA	6	2	12
+hpat1	661631	661642	CCCCCG	6	2	12
+hpat1	661936	661947	GGCTCG	6	2	12
+hpat1	661953	661964	GGCGGC	6	2	12
+hpat1	662189	662200	CAGAGA	6	2	12
+hpat1	662391	662402	ACACAC	6	2	12
+hpat1	662617	662628	CCTCTC	6	2	12
+hpat1	663604	663618	AAA	3	5	15
+hpat1	663771	663791	AAT	3	7	21
+hpat1	664081	664092	TTTTTT	6	2	12
+hpat1	667668	667679	AATGGG	6	2	12
+hpat1	668025	668036	GTGTAA	6	2	12
+hpat1	668718	668729	CCATTT	6	2	12
+hpat1	669900	669914	AAA	3	5	15
+hpat1	670208	670219	TTTTTA	6	2	12
+hpat1	671191	671202	GAGGGG	6	2	12
+hpat1	671869	671886	TACAAA	6	3	18
+hpat1	671887	671925	TAA	3	13	39
+hpat1	671964	671975	CTGAGG	6	2	12
+hpat1	672093	672104	AACAAC	6	2	12
+hpat1	672105	672116	AAAGAA	6	2	12
+hpat1	672622	672639	AAA	3	6	18
+hpat1	675613	675624	AAGTGT	6	2	12
+hpat1	675731	675742	GGCACA	6	2	12
+hpat1	676339	676350	ATTTCT	6	2	12
+hpat1	676352	676363	TTTATT	6	2	12
+hpat1	677003	677036	GT	2	17	34
+hpat1	677457	677468	AGAAAG	6	2	12
+hpat1	678388	678399	TGAAAC	6	2	12
+hpat1	678858	678869	TTTTTC	6	2	12
+hpat1	682346	682361	TTAT	4	4	16
+hpat1	684578	684589	AATAAC	6	2	12
+hpat1	684953	684964	AGAGCC	6	2	12
+hpat1	685312	685323	GGAGGT	6	2	12
+hpat1	685386	685413	A	1	28	28
+hpat1	686068	686079	CGGGGG	6	2	12
+hpat1	686825	686842	TTT	3	6	18
+hpat1	686899	686910	CAGCCT	6	2	12
+hpat1	687586	687605	TCAA	4	5	20
+hpat1	687651	687662	AGGGAG	6	2	12
+hpat1	688067	688078	TCCTGG	6	2	12
+hpat1	689018	689037	AAAT	4	5	20
+hpat1	690132	690143	TTTCTT	6	2	12
+hpat1	690303	690314	AAGAGG	6	2	12
+hpat1	693707	693718	AGGGGC	6	2	12
+hpat1	694426	694437	TTTTGT	6	2	12
+hpat1	694506	694517	CAGCCT	6	2	12
+hpat1	694598	694609	TTTTTT	6	2	12
+hpat1	694903	694914	TATTTA	6	2	12
+hpat1	695265	695276	CAAGGC	6	2	12
+hpat1	696496	696507	CGCCCC	6	2	12
+hpat1	696718	696729	CGCCCC	6	2	12
+hpat1	697067	697078	TGGGGG	6	2	12
+hpat1	697568	697589	GT	2	11	22
+hpat1	698582	698593	TCTGAT	6	2	12
+hpat1	698951	698962	AATTGA	6	2	12
+hpat1	699157	699171	TTT	3	5	15