# HG changeset patch
# User fubar
# Date 1721202000 0
# Node ID db5523378e5c55e446c4821f41dd219a217917a4
# Parent 607620f93b4c4077db87de58b9a63458d545209d
planemo upload for repository https://github.com/fubar2/microsatbed commit d952bc313f408735456747c3d33e09a3170c8f59-dirty
diff -r 607620f93b4c -r db5523378e5c find_str.py
--- a/find_str.py Wed Jul 17 06:19:22 2024 +0000
+++ b/find_str.py Wed Jul 17 07:40:00 2024 +0000
@@ -23,8 +23,7 @@
specific = args.specific.upper().split(",")
fa = Fastx(args.fasta, uppercase=True)
for name, seq in fa:
- if args.specific:
- ssrs = pytrf.STRFinder(
+ for ssr in pytrf.STRFinder(
name,
seq,
args.monomin,
@@ -33,29 +32,17 @@
args.tetramin,
args.pentamin,
args.hexamin,
- )
- else:
- ssrs = pytrf.STRFinder(
- name,
- seq,
- args.monomin,
- args.dimin,
- args.trimin,
- args.tetramin,
- args.pentamin,
- args.hexamin,
- )
- for ssr in ssrs:
+ ):
row = (
ssr.chrom,
- ssr.start - 1,
+ ssr.start,
ssr.end,
ssr.motif,
ssr.repeat,
ssr.length,
)
# pytrf reports a 1 based start position so start-1 fixes the bed interval lengths
- if args.specific and ssr.motif in specific and ssr.repeat >= args.minreps:
+ if args.specific and ssr.motif in specific:
bed.append(row)
elif args.mono and len(ssr.motif) == 1:
bed.append(row)
diff -r 607620f93b4c -r db5523378e5c microsatbed.xml
--- a/microsatbed.xml Wed Jul 17 06:19:22 2024 +0000
+++ b/microsatbed.xml Wed Jul 17 07:40:00 2024 +0000
@@ -127,10 +127,10 @@
-
-
-
-
+
+
+
+
diff -r 607620f93b4c -r db5523378e5c test-data/bed_sample
--- a/test-data/bed_sample Wed Jul 17 06:19:22 2024 +0000
+++ b/test-data/bed_sample Wed Jul 17 07:40:00 2024 +0000
@@ -1,46834 +1,990 @@
-hpat1 0 4 AA_2 4
-hpat1 8 12 GA_2 4
-hpat1 13 17 AC_2 4
-hpat1 18 22 AA_2 4
-hpat1 41 45 AA_2 4
-hpat1 45 49 AT_2 4
-hpat1 91 95 TT_2 4
-hpat1 99 105 GAG_2 6
-hpat1 110 114 TA_2 4
-hpat1 120 126 ATG_2 6
-hpat1 129 133 AA_2 4
-hpat1 140 144 TT_2 4
-hpat1 147 151 TA_2 4
-hpat1 169 173 AT_2 4
-hpat1 213 217 AA_2 4
-hpat1 223 227 AT_2 4
-hpat1 234 238 TT_2 4
-hpat1 247 253 TAG_2 6
-hpat1 278 282 AA_2 4
-hpat1 283 289 CAT_2 6
-hpat1 290 294 TT_2 4
-hpat1 300 306 GTT_2 6
-hpat1 307 311 CT_2 4
-hpat1 311 315 TT_2 4
-hpat1 332 336 TA_2 4
-hpat1 341 349 AG_4 8
-hpat1 350 356 ATA_2 6
-hpat1 368 376 TTTC_2 8
-hpat1 381 387 TA_3 6
-hpat1 420 426 ATG_2 6
-hpat1 470 474 AG_2 4
-hpat1 474 480 ACA_2 6
-hpat1 480 484 GG_2 4
-hpat1 505 509 TT_2 4
-hpat1 509 529 ATTT_5 20
-hpat1 530 534 GA_2 4
-hpat1 539 543 TT_2 4
-hpat1 544 548 CT_2 4
-hpat1 548 552 TT_2 4
-hpat1 596 600 CT_2 4
-hpat1 601 607 CCT_2 6
-hpat1 620 624 TC_2 4
-hpat1 661 665 GC_2 4
-hpat1 665 671 CAC_2 6
-hpat1 681 685 TT_2 4
-hpat1 688 692 TT_2 4
-hpat1 692 698 TAG_2 6
-hpat1 702 706 GG_2 4
-hpat1 708 712 TC_2 4
-hpat1 729 733 TC_2 4
-hpat1 748 752 AT_2 4
-hpat1 752 760 CTGC_2 8
-hpat1 789 793 GT_2 4
-hpat1 800 804 CG_2 4
-hpat1 838 842 AG_2 4
-hpat1 855 861 AA_3 6
-hpat1 861 867 ATA_2 6
-hpat1 879 885 TGG_2 6
-hpat1 887 891 CA_2 4
-hpat1 893 897 TA_2 4
-hpat1 932 938 AGG_2 6
-hpat1 939 945 CAG_2 6
-hpat1 975 979 CC_2 4
-hpat1 980 984 TC_2 4
-hpat1 988 992 AA_2 4
-hpat1 996 1000 AA_2 4
-hpat1 1011 1017 GTG_2 6
-hpat1 1036 1042 GCT_2 6
-hpat1 1056 1060 AG_2 4
-hpat1 1098 1102 GA_2 4
-hpat1 1131 1135 AG_2 4
-hpat1 1145 1149 TC_2 4
-hpat1 1149 1157 AA_4 8
-hpat1 1157 1165 TAAA_2 8
-hpat1 1200 1208 AATA_2 8
-hpat1 1210 1218 TAAA_2 8
-hpat1 1225 1229 TC_2 4
-hpat1 1243 1247 AA_2 4
-hpat1 1253 1261 CTAA_2 8
-hpat1 1279 1283 TT_2 4
-hpat1 1293 1299 GCA_2 6
-hpat1 1312 1318 GT_3 6
-hpat1 1320 1324 AC_2 4
-hpat1 1339 1345 AAG_2 6
-hpat1 1397 1401 CC_2 4
-hpat1 1402 1408 ATG_2 6
-hpat1 1422 1426 TG_2 4
-hpat1 1456 1460 TT_2 4
-hpat1 1476 1480 AT_2 4
-hpat1 1480 1488 TTTC_2 8
-hpat1 1494 1500 TTC_2 6
-hpat1 1501 1509 GTTT_2 8
-hpat1 1526 1532 GAT_2 6
-hpat1 1538 1542 TC_2 4
-hpat1 1544 1548 AA_2 4
-hpat1 1554 1558 AA_2 4
-hpat1 1564 1568 TC_2 4
-hpat1 1572 1576 AC_2 4
-hpat1 1587 1591 AG_2 4
-hpat1 1602 1606 TA_2 4
-hpat1 1618 1624 AT_3 6
-hpat1 1642 1646 AT_2 4
-hpat1 1648 1652 TT_2 4
-hpat1 1664 1670 AA_3 6
-hpat1 1673 1677 CC_2 4
-hpat1 1681 1687 TGG_2 6
-hpat1 1708 1712 GA_2 4
-hpat1 1717 1721 AG_2 4
-hpat1 1727 1731 AA_2 4
-hpat1 1733 1739 AGG_2 6
-hpat1 1743 1747 AA_2 4
-hpat1 1749 1757 TCAA_2 8
-hpat1 1762 1766 AC_2 4
-hpat1 1780 1784 CA_2 4
-hpat1 1793 1797 TC_2 4
-hpat1 1799 1803 GG_2 4
-hpat1 1805 1809 TT_2 4
-hpat1 1821 1825 AA_2 4
-hpat1 1829 1833 TC_2 4
-hpat1 1836 1842 TG_3 6
-hpat1 1855 1861 CAG_2 6
-hpat1 1870 1876 GTG_2 6
-hpat1 1900 1906 GCA_2 6
-hpat1 1907 1915 AGGC_2 8
-hpat1 1945 1949 AA_2 4
-hpat1 1949 1955 CC_3 6
-hpat1 1962 1966 CC_2 4
-hpat1 1967 1971 CC_2 4
-hpat1 1973 1977 CC_2 4
-hpat1 1986 1990 AA_2 4
-hpat1 1994 1998 AA_2 4
-hpat1 1998 2004 CAG_2 6
-hpat1 2008 2014 TGG_2 6
-hpat1 2017 2021 GC_2 4
-hpat1 2039 2045 AGG_2 6
-hpat1 2054 2058 GA_2 4
-hpat1 2071 2077 AGG_2 6
-hpat1 2124 2128 AG_2 4
-hpat1 2142 2150 AA_4 8
-hpat1 2150 2162 CAAAAA_2 12
-hpat1 2162 2166 CA_2 4
-hpat1 2172 2176 AG_2 4
-hpat1 2179 2183 CC_2 4
-hpat1 2205 2209 AG_2 4
-hpat1 2212 2216 CC_2 4
-hpat1 2221 2227 AA_3 6
-hpat1 2236 2240 TT_2 4
-hpat1 2240 2244 TC_2 4
-hpat1 2256 2260 AC_2 4
-hpat1 2261 2267 AGG_2 6
-hpat1 2267 2271 GT_2 4
-hpat1 2276 2280 TT_2 4
-hpat1 2305 2309 CC_2 4
-hpat1 2319 2323 AT_2 4
-hpat1 2353 2357 TA_2 4
-hpat1 2361 2365 AA_2 4
-hpat1 2377 2381 AT_2 4
-hpat1 2403 2407 TT_2 4
-hpat1 2407 2411 GG_2 4
-hpat1 2437 2441 AG_2 4
-hpat1 2442 2446 AG_2 4
-hpat1 2455 2459 GA_2 4
-hpat1 2463 2467 GA_2 4
-hpat1 2468 2472 GT_2 4
-hpat1 2502 2506 GA_2 4
-hpat1 2509 2515 GCA_2 6
-hpat1 2537 2541 CT_2 4
-hpat1 2558 2562 TC_2 4
-hpat1 2566 2570 AG_2 4
-hpat1 2650 2656 AT_3 6
-hpat1 2660 2666 GTT_2 6
-hpat1 2678 2684 GT_3 6
-hpat1 2690 2696 TTG_2 6
-hpat1 2696 2702 CAG_2 6
-hpat1 2703 2707 CA_2 4
-hpat1 2733 2737 AA_2 4
-hpat1 2737 2743 CC_3 6
-hpat1 2748 2758 GGGCT_2 10
-hpat1 2797 2801 GA_2 4
-hpat1 2829 2833 GA_2 4
-hpat1 2833 2843 CCAGC_2 10
-hpat1 2863 2867 TA_2 4
-hpat1 2868 2874 AA_3 6
-hpat1 2877 2881 AA_2 4
-hpat1 2893 2899 TGG_2 6
-hpat1 2899 2903 CA_2 4
-hpat1 2912 2916 TC_2 4
-hpat1 2924 2930 AGG_2 6
-hpat1 2932 2936 GA_2 4
-hpat1 2939 2943 GA_2 4
-hpat1 2957 2963 GG_3 6
-hpat1 2964 2968 AG_2 4
-hpat1 2981 2985 GA_2 4
-hpat1 2987 2993 CCA_2 6
-hpat1 3014 3018 AG_2 4
-hpat1 3028 3032 TC_2 4
-hpat1 3033 3037 AA_2 4
-hpat1 3037 3052 CAAAA_3 15
-hpat1 3055 3059 CC_2 4
-hpat1 3086 3090 CT_2 4
-hpat1 3099 3103 CC_2 4
-hpat1 3124 3128 TG_2 4
-hpat1 3143 3151 GAAG_2 8
-hpat1 3153 3159 CCT_2 6
-hpat1 3165 3169 AG_2 4
-hpat1 3179 3183 GA_2 4
-hpat1 3198 3204 ACT_2 6
-hpat1 3211 3215 CC_2 4
-hpat1 3215 3219 TC_2 4
-hpat1 3229 3233 AT_2 4
-hpat1 3235 3247 TT_6 12
-hpat1 3260 3264 CT_2 4
-hpat1 3265 3269 TC_2 4
-hpat1 3284 3288 GG_2 4
-hpat1 3288 3292 CA_2 4
-hpat1 3293 3297 TC_2 4
-hpat1 3310 3314 CT_2 4
-hpat1 3318 3322 CC_2 4
-hpat1 3334 3338 TC_2 4
-hpat1 3347 3351 TC_2 4
-hpat1 3373 3377 GT_2 4
-hpat1 3392 3396 TT_2 4
-hpat1 3418 3422 TT_2 4
-hpat1 3460 3466 AGT_2 6
-hpat1 3473 3477 TC_2 4
-hpat1 3479 3483 CC_2 4
-hpat1 3550 3554 TT_2 4
-hpat1 3572 3582 GTCTG_2 10
-hpat1 3583 3587 CT_2 4
-hpat1 3588 3592 CC_2 4
-hpat1 3593 3597 CT_2 4
-hpat1 3600 3604 TC_2 4
-hpat1 3627 3631 TT_2 4
-hpat1 3635 3639 AG_2 4
-hpat1 3639 3643 GA_2 4
-hpat1 3643 3649 GT_3 6
-hpat1 3650 3654 CC_2 4
-hpat1 3697 3703 GCT_2 6
-hpat1 3703 3707 CC_2 4
-hpat1 3714 3720 GAA_2 6
-hpat1 3720 3726 AA_3 6
-hpat1 3729 3735 TC_3 6
-hpat1 3735 3739 TG_2 4
-hpat1 3762 3766 CC_2 4
-hpat1 3773 3777 TG_2 4
-hpat1 3777 3781 AG_2 4
-hpat1 3795 3801 CCA_2 6
-hpat1 3814 3818 GG_2 4
-hpat1 3826 3830 GT_2 4
-hpat1 3838 3842 CC_2 4
-hpat1 3845 3853 AA_4 8
-hpat1 3856 3862 GCA_2 6
-hpat1 3876 3880 GC_2 4
-hpat1 3881 3885 CA_2 4
-hpat1 3905 3915 GAGGG_2 10
-hpat1 3938 3942 GG_2 4
-hpat1 3944 3950 AG_3 6
-hpat1 3950 3954 GC_2 4
-hpat1 3962 3968 GGC_2 6
-hpat1 3971 3975 CC_2 4
-hpat1 3994 3998 CT_2 4
-hpat1 4026 4030 TG_2 4
-hpat1 4034 4038 GG_2 4
-hpat1 4045 4049 AA_2 4
-hpat1 4050 4054 CA_2 4
-hpat1 4057 4061 CC_2 4
-hpat1 4071 4075 CC_2 4
-hpat1 4081 4085 GG_2 4
-hpat1 4086 4090 AG_2 4
-hpat1 4093 4099 GGA_2 6
-hpat1 4108 4112 AG_2 4
-hpat1 4112 4116 GA_2 4
+hpat1 506 526 TTTA_5 20
+hpat1 1962 1974 CCCCAC_2 12
+hpat1 2145 2163 AAAAAC_3 18
+hpat1 3033 3048 AAAAC_3 15
+hpat1 3235 3247 TTTTTT_2 12
hpat1 4116 4128 GGCAGG_2 12
-hpat1 4149 4155 AGG_2 6
-hpat1 4162 4166 TC_2 4
-hpat1 4186 4190 TC_2 4
-hpat1 4198 4202 CC_2 4
-hpat1 4216 4220 GG_2 4
-hpat1 4227 4231 GA_2 4
-hpat1 4238 4242 TC_2 4
-hpat1 4284 4288 GT_2 4
-hpat1 4291 4295 CC_2 4
hpat1 4310 4325 GTTTT_3 15
-hpat1 4327 4331 TT_2 4
-hpat1 4332 4336 GA_2 4
-hpat1 4337 4341 AG_2 4
-hpat1 4380 4384 TC_2 4
-hpat1 4386 4390 CA_2 4
-hpat1 4399 4403 GC_2 4
-hpat1 4421 4425 TC_2 4
-hpat1 4435 4439 CT_2 4
-hpat1 4465 4471 CCA_2 6
-hpat1 4482 4488 TT_3 6
-hpat1 4491 4495 TT_2 4
-hpat1 4495 4501 TAG_2 6
-hpat1 4590 4594 AT_2 4
-hpat1 4601 4605 TG_2 4
-hpat1 4611 4615 CA_2 4
-hpat1 4623 4627 TT_2 4
-hpat1 4627 4631 GT_2 4
-hpat1 4632 4636 GA_2 4
-hpat1 4657 4661 AA_2 4
-hpat1 4666 4670 CA_2 4
-hpat1 4671 4675 CT_2 4
-hpat1 4678 4682 TC_2 4
-hpat1 4698 4704 AA_3 6
-hpat1 4712 4716 CT_2 4
-hpat1 4722 4726 AG_2 4
-hpat1 4727 4731 TG_2 4
-hpat1 4733 4739 AGC_2 6
-hpat1 4746 4750 GG_2 4
-hpat1 4763 4767 CT_2 4
-hpat1 4783 4787 CT_2 4
-hpat1 4793 4799 CAT_2 6
-hpat1 4799 4803 CC_2 4
-hpat1 4804 4812 AGGC_2 8
-hpat1 4831 4835 AG_2 4
-hpat1 4839 4843 GG_2 4
-hpat1 4845 4849 GG_2 4
-hpat1 4851 4855 TG_2 4
-hpat1 4860 4864 TG_2 4
-hpat1 4874 4878 GA_2 4
-hpat1 4883 4887 CA_2 4
-hpat1 4906 4910 GC_2 4
-hpat1 4914 4918 TC_2 4
-hpat1 4926 4932 TCC_2 6
-hpat1 4938 4942 AG_2 4
-hpat1 4946 4950 GG_2 4
-hpat1 4954 4958 GA_2 4
-hpat1 4968 4974 GCA_2 6
-hpat1 4978 4982 AA_2 4
-hpat1 4985 4991 TAT_2 6
-hpat1 4995 5003 TCCC_2 8
-hpat1 5027 5031 AC_2 4
-hpat1 5033 5037 AT_2 4
-hpat1 5053 5057 TC_2 4
-hpat1 5104 5108 CA_2 4
-hpat1 5113 5117 AT_2 4
-hpat1 5137 5141 AG_2 4
-hpat1 5155 5159 GG_2 4
-hpat1 5160 5164 GG_2 4
-hpat1 5173 5177 GT_2 4
-hpat1 5188 5192 TG_2 4
-hpat1 5199 5203 GA_2 4
-hpat1 5209 5213 GG_2 4
-hpat1 5214 5220 AGC_2 6
-hpat1 5253 5257 GA_2 4
-hpat1 5265 5269 AA_2 4
-hpat1 5280 5284 CA_2 4
-hpat1 5301 5305 AG_2 4
-hpat1 5357 5363 GAA_2 6
-hpat1 5375 5379 GG_2 4
-hpat1 5387 5391 AC_2 4
-hpat1 5395 5399 GG_2 4
-hpat1 5412 5416 AG_2 4
-hpat1 5443 5447 GT_2 4
-hpat1 5450 5454 CC_2 4
-hpat1 5459 5465 ATG_2 6
-hpat1 5470 5476 TT_3 6
-hpat1 5477 5481 TT_2 4
-hpat1 5483 5487 TT_2 4
-hpat1 5488 5492 GA_2 4
-hpat1 5502 5506 CT_2 4
-hpat1 5509 5515 CA_3 6
-hpat1 5532 5536 AG_2 4
-hpat1 5555 5559 CT_2 4
-hpat1 5561 5565 GT_2 4
-hpat1 5580 5584 AA_2 4
-hpat1 5585 5589 CC_2 4
-hpat1 5591 5595 CC_2 4
-hpat1 5601 5607 CAC_2 6
-hpat1 5610 5614 CC_2 4
-hpat1 5618 5624 ACT_2 6
-hpat1 5645 5649 GG_2 4
-hpat1 5680 5686 CAA_2 6
-hpat1 5697 5701 CC_2 4
-hpat1 5709 5713 GG_2 4
-hpat1 5718 5722 GG_2 4
-hpat1 5736 5740 CC_2 4
-hpat1 5749 5753 CT_2 4
-hpat1 5760 5764 AC_2 4
-hpat1 5779 5783 CA_2 4
-hpat1 5785 5789 GA_2 4
-hpat1 5797 5801 GC_2 4
-hpat1 5812 5816 GG_2 4
-hpat1 5826 5830 AG_2 4
-hpat1 5853 5857 CC_2 4
-hpat1 5876 5880 AG_2 4
-hpat1 5885 5889 TT_2 4
-hpat1 5894 5898 TG_2 4
-hpat1 5901 5905 AG_2 4
-hpat1 5906 5912 GCA_2 6
-hpat1 5912 5918 GCT_2 6
-hpat1 5947 5951 TC_2 4
-hpat1 5984 5988 CA_2 4
-hpat1 6013 6017 AG_2 4
-hpat1 6021 6025 AG_2 4
-hpat1 6039 6043 TC_2 4
-hpat1 6054 6058 TG_2 4
-hpat1 6070 6074 GA_2 4
-hpat1 6087 6091 GA_2 4
-hpat1 6106 6112 AGC_2 6
-hpat1 6123 6127 CC_2 4
-hpat1 6129 6137 TGGA_2 8
-hpat1 6138 6142 GC_2 4
-hpat1 6148 6156 TGGA_2 8
-hpat1 6164 6172 CAGA_2 8
-hpat1 6200 6204 GA_2 4
-hpat1 6207 6211 CA_2 4
-hpat1 6219 6223 GT_2 4
-hpat1 6273 6277 CC_2 4
-hpat1 6280 6286 ACC_2 6
-hpat1 6312 6318 CAG_2 6
-hpat1 6318 6322 CA_2 4
-hpat1 6345 6349 GG_2 4
-hpat1 6355 6359 AG_2 4
-hpat1 6361 6365 CC_2 4
-hpat1 6390 6394 CC_2 4
-hpat1 6396 6400 CT_2 4
-hpat1 6407 6413 CTT_2 6
-hpat1 6429 6433 CC_2 4
-hpat1 6434 6438 AC_2 4
-hpat1 6456 6460 TG_2 4
-hpat1 6498 6506 AA_4 8
-hpat1 6517 6521 AT_2 4
-hpat1 6555 6559 AT_2 4
-hpat1 6559 6565 AAC_2 6
-hpat1 6572 6576 AC_2 4
-hpat1 6585 6593 AT_4 8
-hpat1 6611 6615 AC_2 4
-hpat1 6621 6625 AT_2 4
-hpat1 6626 6630 AA_2 4
-hpat1 6635 6639 TT_2 4
-hpat1 6640 6644 AA_2 4
-hpat1 6646 6650 TA_2 4
-hpat1 6677 6685 TATT_2 8
-hpat1 6686 6690 AA_2 4
-hpat1 6695 6701 ATC_2 6
-hpat1 6718 6722 AT_2 4
-hpat1 6732 6736 CA_2 4
-hpat1 6756 6762 TAA_2 6
-hpat1 6765 6771 AGC_2 6
-hpat1 6771 6777 CAG_2 6
-hpat1 6783 6789 AC_3 6
-hpat1 6792 6796 AA_2 4
-hpat1 6799 6803 AA_2 4
-hpat1 6806 6810 AG_2 4
-hpat1 6833 6837 TT_2 4
-hpat1 6880 6884 TT_2 4
-hpat1 6889 6897 AACT_2 8
-hpat1 6902 6906 AT_2 4
-hpat1 6906 6910 GA_2 4
-hpat1 6923 6927 TA_2 4
-hpat1 6976 6980 AA_2 4
-hpat1 7000 7004 TG_2 4
-hpat1 7012 7018 GTA_2 6
-hpat1 7018 7022 AC_2 4
-hpat1 7036 7040 CC_2 4
-hpat1 7044 7048 AG_2 4
-hpat1 7050 7054 TG_2 4
-hpat1 7061 7067 TCA_2 6
-hpat1 7069 7073 CA_2 4
-hpat1 7075 7079 GA_2 4
-hpat1 7083 7089 AGA_2 6
-hpat1 7095 7099 AA_2 4
-hpat1 7115 7119 GA_2 4
-hpat1 7126 7130 AG_2 4
-hpat1 7143 7147 TT_2 4
-hpat1 7152 7156 CC_2 4
-hpat1 7177 7183 TGG_2 6
-hpat1 7184 7188 TG_2 4
-hpat1 7206 7210 TC_2 4
-hpat1 7219 7223 GG_2 4
-hpat1 7223 7229 AAT_2 6
-hpat1 7229 7235 CAT_2 6
+hpat1 5471 5483 TTTTTG_2 12
+hpat1 5583 5595 AGCCCC_2 12
hpat1 7238 7250 GAAAAA_2 12
-hpat1 7289 7293 CT_2 4
-hpat1 7312 7316 AA_2 4
-hpat1 7340 7346 TTA_2 6
-hpat1 7349 7355 ATT_2 6
-hpat1 7379 7385 TT_3 6
-hpat1 7409 7413 TT_2 4
-hpat1 7417 7421 TG_2 4
-hpat1 7437 7441 TT_2 4
-hpat1 7443 7447 CT_2 4
-hpat1 7462 7466 TT_2 4
-hpat1 7483 7489 ATC_2 6
-hpat1 7497 7501 TC_2 4
-hpat1 7505 7509 TC_2 4
-hpat1 7527 7533 TGC_2 6
-hpat1 7558 7562 TT_2 4
-hpat1 7562 7566 GA_2 4
-hpat1 7566 7570 AA_2 4
-hpat1 7586 7592 GCC_2 6
-hpat1 7598 7602 TA_2 4
-hpat1 7605 7609 AT_2 4
-hpat1 7609 7615 AGA_2 6
-hpat1 7621 7631 ATAAA_2 10
-hpat1 7642 7648 AA_3 6
-hpat1 7663 7667 AA_2 4
-hpat1 7671 7675 CG_2 4
-hpat1 7712 7716 TT_2 4
-hpat1 7725 7729 AA_2 4
-hpat1 7748 7752 AG_2 4
-hpat1 7763 7769 TGG_2 6
-hpat1 7803 7811 AGGC_2 8
-hpat1 7834 7838 GA_2 4
-hpat1 7852 7856 AG_2 4
-hpat1 7863 7871 CT_4 8
-hpat1 7874 7878 AA_2 4
-hpat1 7882 7886 AA_2 4
-hpat1 7913 7917 TG_2 4
-hpat1 7930 7934 GA_2 4
-hpat1 7970 7974 GA_2 4
-hpat1 7997 8001 CC_2 4
-hpat1 8002 8006 TC_2 4
-hpat1 8010 8014 AA_2 4
-hpat1 8016 8022 ACA_2 6
-hpat1 8030 8034 GT_2 4
-hpat1 8039 8043 CA_2 4
-hpat1 8079 8083 GA_2 4
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hpat1 8743 8755 GGAGGT_2 12
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hpat1 13522 13546 AACCCT_4 24
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hpat1 13766 13778 CTCACC_2 12
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hpat1 14306 14318 GGCGCA_2 12
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hpat1 14335 14347 GGCGCA_2 12
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hpat1 16147 16159 GAGTGG_2 12
-hpat1 16164 16168 CC_2 4
-hpat1 16173 16177 CT_2 4
-hpat1 16189 16193 TC_2 4
-hpat1 16196 16200 TC_2 4
-hpat1 16202 16206 GG_2 4
-hpat1 16217 16221 CC_2 4
-hpat1 16223 16227 CA_2 4
-hpat1 16229 16233 CT_2 4
-hpat1 16243 16247 TG_2 4
-hpat1 16262 16268 CTG_2 6
-hpat1 16280 16284 TA_2 4
-hpat1 16287 16293 CCT_2 6
-hpat1 16314 16318 AG_2 4
-hpat1 16365 16369 CC_2 4
-hpat1 16383 16387 AG_2 4
-hpat1 16388 16398 CCAGG_2 10
-hpat1 16400 16404 CC_2 4
-hpat1 16413 16417 CT_2 4
-hpat1 16421 16425 GA_2 4
-hpat1 16428 16432 TG_2 4
-hpat1 16485 16493 GACA_2 8
-hpat1 16493 16497 GG_2 4
-hpat1 16500 16504 GA_2 4
-hpat1 16505 16509 GG_2 4
-hpat1 16509 16515 AGA_2 6
-hpat1 16520 16526 GG_3 6
-hpat1 16526 16534 CTGC_2 8
-hpat1 16538 16542 TC_2 4
hpat1 16546 16558 CTGAGG_2 12
-hpat1 16565 16569 GG_2 4
-hpat1 16580 16584 GG_2 4
-hpat1 16610 16614 CT_2 4
-hpat1 16683 16687 AC_2 4
-hpat1 16767 16773 CTG_2 6
-hpat1 16773 16777 TG_2 4
-hpat1 16793 16797 TT_2 4
-hpat1 16805 16809 GA_2 4
-hpat1 16813 16819 CCA_2 6
-hpat1 16819 16823 CC_2 4
-hpat1 16823 16827 GA_2 4
-hpat1 16834 16838 TC_2 4
-hpat1 16844 16848 TT_2 4
-hpat1 16875 16879 CT_2 4
-hpat1 16895 16901 CAC_2 6
-hpat1 16907 16911 GC_2 4
-hpat1 16912 16916 GC_2 4
-hpat1 16916 16924 CCTT_2 8
-hpat1 16926 16930 CT_2 4
-hpat1 16938 16942 GA_2 4
-hpat1 16944 16948 GT_2 4
-hpat1 16997 17001 GA_2 4
-hpat1 17001 17005 GT_2 4
-hpat1 17012 17016 AG_2 4
hpat1 17029 17041 CAGGCA_2 12
-hpat1 17054 17058 GA_2 4
-hpat1 17063 17067 GG_2 4
-hpat1 17073 17079 GAA_2 6
-hpat1 17080 17086 TGG_2 6
-hpat1 17101 17105 GA_2 4
-hpat1 17121 17125 CC_2 4
-hpat1 17127 17131 TG_2 4
-hpat1 17174 17178 TC_2 4
-hpat1 17185 17189 CT_2 4
-hpat1 17191 17197 AGG_2 6
-hpat1 17229 17233 GA_2 4
-hpat1 17263 17267 TA_2 4
-hpat1 17298 17302 CC_2 4
-hpat1 17306 17310 TC_2 4
-hpat1 17315 17319 AA_2 4
-hpat1 17323 17327 CC_2 4
-hpat1 17332 17336 CA_2 4
-hpat1 17339 17343 CC_2 4
-hpat1 17348 17352 GG_2 4
-hpat1 17363 17367 CC_2 4
-hpat1 17370 17376 CTT_2 6
-hpat1 17411 17415 CC_2 4
-hpat1 17436 17440 TC_2 4
-hpat1 17457 17463 TCC_2 6
-hpat1 17475 17487 CCTC_3 12
-hpat1 17514 17520 TCT_2 6
-hpat1 17521 17525 CC_2 4
-hpat1 17526 17530 AC_2 4
-hpat1 17537 17541 TG_2 4
-hpat1 17556 17560 CT_2 4
-hpat1 17571 17575 TT_2 4
-hpat1 17576 17580 AG_2 4
-hpat1 17581 17585 CC_2 4
-hpat1 17585 17589 GT_2 4
-hpat1 17603 17609 TT_3 6
-hpat1 17613 17617 GA_2 4
-hpat1 17621 17627 TCC_2 6
-hpat1 17642 17646 CC_2 4
-hpat1 17659 17665 TC_3 6
-hpat1 17669 17673 CT_2 4
-hpat1 17679 17683 AG_2 4
-hpat1 17707 17711 CC_2 4
-hpat1 17730 17734 GG_2 4
-hpat1 17735 17741 AGG_2 6
-hpat1 17751 17755 CC_2 4
-hpat1 17755 17759 GA_2 4
-hpat1 17772 17776 CA_2 4
-hpat1 17779 17783 AG_2 4
-hpat1 17788 17794 TTA_2 6
-hpat1 17798 17802 CA_2 4
-hpat1 17826 17834 ATTG_2 8
-hpat1 17834 17838 GT_2 4
-hpat1 17842 17846 TT_2 4
-hpat1 17846 17850 CT_2 4
-hpat1 17856 17860 CT_2 4
-hpat1 17862 17866 AG_2 4
-hpat1 17870 17874 AC_2 4
-hpat1 17878 17882 GC_2 4
-hpat1 17899 17905 CC_3 6
-hpat1 17911 17915 CA_2 4
-hpat1 17917 17925 CAGA_2 8
-hpat1 17928 17932 CC_2 4
-hpat1 17933 17937 CC_2 4
-hpat1 17940 17946 TG_3 6
-hpat1 17979 17983 TC_2 4
-hpat1 17985 17989 CA_2 4
-hpat1 18004 18008 CC_2 4
-hpat1 18028 18034 AGC_2 6
-hpat1 18044 18048 TG_2 4
-hpat1 18056 18060 AG_2 4
hpat1 18071 18083 GTCTGG_2 12
-hpat1 18083 18087 GG_2 4
-hpat1 18091 18095 GT_2 4
-hpat1 18102 18106 CC_2 4
-hpat1 18118 18124 GTC_2 6
-hpat1 18128 18134 TCC_2 6
-hpat1 18140 18144 TG_2 4
-hpat1 18144 18150 GCT_2 6
-hpat1 18155 18161 GGC_2 6
-hpat1 18161 18165 AG_2 4
-hpat1 18180 18184 AC_2 4
-hpat1 18195 18201 CTC_2 6
-hpat1 18205 18209 CC_2 4
-hpat1 18216 18220 CC_2 4
-hpat1 18232 18236 AG_2 4
-hpat1 18248 18252 AA_2 4
-hpat1 18255 18263 TGAG_2 8
-hpat1 18263 18269 GGT_2 6
-hpat1 18269 18275 TGG_2 6
-hpat1 18287 18291 CC_2 4
-hpat1 18294 18298 CC_2 4
-hpat1 18300 18304 GA_2 4
-hpat1 18315 18321 GAA_2 6
-hpat1 18342 18346 TG_2 4
-hpat1 18354 18362 GGGC_2 8
-hpat1 18372 18378 CCT_2 6
-hpat1 18384 18388 GC_2 4
-hpat1 18400 18406 TTG_2 6
-hpat1 18407 18411 AG_2 4
-hpat1 18425 18429 CC_2 4
-hpat1 18443 18447 CT_2 4
-hpat1 18464 18468 CA_2 4
-hpat1 18472 18476 GG_2 4
-hpat1 18479 18483 AG_2 4
-hpat1 18489 18493 CA_2 4
-hpat1 18513 18517 CC_2 4
-hpat1 18518 18522 CC_2 4
-hpat1 18526 18530 AC_2 4
-hpat1 18531 18535 CC_2 4
-hpat1 18551 18555 TG_2 4
-hpat1 18570 18574 AG_2 4
-hpat1 18606 18612 TGA_2 6
-hpat1 18626 18632 GAG_2 6
-hpat1 18650 18654 GG_2 4
-hpat1 18665 18669 GT_2 4
-hpat1 18669 18675 GCA_2 6
-hpat1 18687 18691 GG_2 4
-hpat1 18701 18707 AG_3 6
-hpat1 18723 18727 GG_2 4
-hpat1 18728 18732 CA_2 4
-hpat1 18741 18745 AA_2 4
-hpat1 18745 18751 GCA_2 6
-hpat1 18765 18769 AA_2 4
+hpat1 18119 18131 TCGTCC_2 12
hpat1 18794 18806 GCAGGC_2 12
-hpat1 18813 18817 CA_2 4
-hpat1 18820 18824 GT_2 4
-hpat1 18831 18835 CA_2 4
-hpat1 18840 18846 CAT_2 6
-hpat1 18857 18861 AG_2 4
-hpat1 18874 18878 TC_2 4
-hpat1 18879 18883 AA_2 4
-hpat1 18883 18887 AT_2 4
-hpat1 18890 18896 AGG_2 6
-hpat1 18925 18929 CT_2 4
-hpat1 18938 18944 AAG_2 6
-hpat1 18946 18950 TC_2 4
-hpat1 18954 18958 CA_2 4
-hpat1 18977 18983 AG_3 6
-hpat1 19001 19005 CC_2 4
-hpat1 19005 19013 AGGA_2 8
-hpat1 19022 19030 CAGG_2 8
-hpat1 19042 19046 CT_2 4
-hpat1 19070 19074 TG_2 4
-hpat1 19079 19083 GG_2 4
-hpat1 19088 19092 GG_2 4
-hpat1 19108 19112 GG_2 4
-hpat1 19144 19154 GGAGG_2 10
-hpat1 19181 19185 CA_2 4
hpat1 19206 19218 TGCTCC_2 12
-hpat1 19223 19232 CTT_3 9
-hpat1 19256 19260 GC_2 4
-hpat1 19278 19282 CC_2 4
-hpat1 19298 19302 CT_2 4
-hpat1 19305 19309 AG_2 4
-hpat1 19325 19329 GG_2 4
-hpat1 19352 19362 CTGGA_2 10
-hpat1 19372 19376 GG_2 4
-hpat1 19385 19391 AGG_2 6
-hpat1 19395 19401 GCT_2 6
-hpat1 19401 19409 CAGG_2 8
-hpat1 19412 19416 GG_2 4
-hpat1 19424 19428 TG_2 4
-hpat1 19432 19436 AG_2 4
-hpat1 19437 19443 CTG_2 6
-hpat1 19458 19462 CC_2 4
-hpat1 19468 19474 GAG_2 6
-hpat1 19474 19478 CC_2 4
-hpat1 19478 19482 GC_2 4
-hpat1 19483 19487 GG_2 4
-hpat1 19501 19505 GA_2 4
-hpat1 19506 19512 TG_3 6
-hpat1 19512 19518 GG_3 6
-hpat1 19538 19544 ACC_2 6
-hpat1 19547 19551 GC_2 4
-hpat1 19559 19565 TG_3 6
-hpat1 19582 19588 CT_3 6
-hpat1 19590 19594 CC_2 4
-hpat1 19602 19606 AG_2 4
-hpat1 19611 19615 CC_2 4
-hpat1 19628 19632 CT_2 4
-hpat1 19637 19641 TC_2 4
-hpat1 19646 19652 CA_3 6
-hpat1 19657 19663 CAG_2 6
-hpat1 19664 19668 GG_2 4
-hpat1 19668 19672 TT_2 4
-hpat1 19703 19707 GA_2 4
-hpat1 19709 19715 CAG_2 6
-hpat1 19721 19731 TGAAA_2 10
-hpat1 19733 19737 TG_2 4
-hpat1 19750 19756 TTA_2 6
-hpat1 19758 19762 CC_2 4
-hpat1 19788 19792 GG_2 4
-hpat1 19797 19801 AG_2 4
-hpat1 19820 19824 CT_2 4
-hpat1 19835 19839 GA_2 4
-hpat1 19844 19848 AG_2 4
-hpat1 19848 19852 CT_2 4
-hpat1 19860 19864 AA_2 4
-hpat1 19870 19874 TT_2 4
-hpat1 19893 19897 AT_2 4
-hpat1 19915 19921 AA_3 6
-hpat1 19923 19927 GA_2 4
-hpat1 19949 19953 CA_2 4
-hpat1 19954 19958 AA_2 4
-hpat1 19977 19981 CA_2 4
-hpat1 20002 20006 AG_2 4
-hpat1 20022 20026 GA_2 4
-hpat1 20026 20030 CG_2 4
-hpat1 20030 20039 CTG_3 9
-hpat1 20040 20046 CGT_2 6
-hpat1 20046 20054 CCTG_2 8
-hpat1 20054 20058 GC_2 4
-hpat1 20069 20073 GG_2 4
-hpat1 20074 20078 CG_2 4
-hpat1 20093 20097 GG_2 4
-hpat1 20123 20127 GG_2 4
-hpat1 20129 20135 GGT_2 6
-hpat1 20135 20139 GG_2 4
-hpat1 20144 20148 GG_2 4
-hpat1 20148 20160 GTG_4 12
-hpat1 20169 20173 CC_2 4
-hpat1 20189 20193 AC_2 4
-hpat1 20196 20200 GT_2 4
-hpat1 20200 20204 GG_2 4
-hpat1 20212 20218 GAA_2 6
-hpat1 20220 20226 TG_3 6
-hpat1 20237 20241 CC_2 4
-hpat1 20249 20259 TCCCA_2 10
-hpat1 20298 20302 GT_2 4
-hpat1 20331 20335 GG_2 4
-hpat1 20336 20340 AG_2 4
-hpat1 20340 20344 GG_2 4
-hpat1 20351 20355 GG_2 4
-hpat1 20401 20409 CAGG_2 8
-hpat1 20425 20429 TC_2 4
-hpat1 20450 20454 CA_2 4
-hpat1 20458 20464 AGT_2 6
-hpat1 20464 20468 TC_2 4
-hpat1 20495 20499 TG_2 4
-hpat1 20499 20503 AG_2 4
-hpat1 20519 20523 GG_2 4
-hpat1 20527 20533 CAA_2 6
-hpat1 20538 20544 TG_3 6
-hpat1 20565 20569 GG_2 4
-hpat1 20586 20590 GA_2 4
-hpat1 20594 20598 CT_2 4
-hpat1 20624 20628 TC_2 4
-hpat1 20631 20635 CT_2 4
-hpat1 20641 20645 CC_2 4
-hpat1 20651 20657 CTG_2 6
-hpat1 20662 20668 GCT_2 6
-hpat1 20668 20674 CT_3 6
-hpat1 20687 20691 GG_2 4
-hpat1 20704 20708 TC_2 4
-hpat1 20708 20712 CT_2 4
-hpat1 20713 20717 TC_2 4
-hpat1 20719 20723 CC_2 4
-hpat1 20729 20733 CA_2 4
-hpat1 20751 20759 CCAG_2 8
-hpat1 20759 20763 GG_2 4
-hpat1 20777 20783 CTT_2 6
-hpat1 20791 20795 AG_2 4
-hpat1 20802 20806 GG_2 4
-hpat1 20819 20823 AC_2 4
-hpat1 20845 20849 CT_2 4
-hpat1 20851 20855 CA_2 4
-hpat1 20855 20861 TCA_2 6
-hpat1 20861 20865 GG_2 4
-hpat1 20865 20869 CA_2 4
-hpat1 20877 20881 TG_2 4
-hpat1 20895 20905 CCGAG_2 10
-hpat1 20915 20919 CC_2 4
-hpat1 20934 20938 TG_2 4
-hpat1 20945 20949 TG_2 4
-hpat1 20964 20968 CC_2 4
-hpat1 20993 20997 CA_2 4
-hpat1 20997 21001 CC_2 4
-hpat1 21004 21014 GCCCT_2 10
-hpat1 21028 21032 TC_2 4
-hpat1 21033 21039 GTG_2 6
-hpat1 21043 21047 AG_2 4
-hpat1 21062 21066 AG_2 4
-hpat1 21084 21088 CC_2 4
-hpat1 21095 21099 CT_2 4
-hpat1 21135 21139 CA_2 4
-hpat1 21157 21161 TC_2 4
-hpat1 21193 21197 AT_2 4
-hpat1 21223 21227 CC_2 4
-hpat1 21238 21244 CCT_2 6
-hpat1 21246 21250 GG_2 4
-hpat1 21261 21267 TGG_2 6
-hpat1 21267 21271 CC_2 4
-hpat1 21273 21279 CTC_2 6
-hpat1 21291 21297 TCC_2 6
-hpat1 21299 21305 GT_3 6
-hpat1 21319 21323 TG_2 4
-hpat1 21329 21335 CAG_2 6
-hpat1 21357 21361 GG_2 4
-hpat1 21365 21373 TGCT_2 8
-hpat1 21381 21385 TG_2 4
-hpat1 21387 21391 GG_2 4
-hpat1 21394 21398 TC_2 4
-hpat1 21416 21420 GC_2 4
-hpat1 21436 21440 AT_2 4
-hpat1 21448 21452 GC_2 4
-hpat1 21476 21480 GA_2 4
-hpat1 21480 21484 AC_2 4
-hpat1 21485 21489 TG_2 4
-hpat1 21490 21494 AC_2 4
-hpat1 21508 21512 GG_2 4
-hpat1 21513 21517 CC_2 4
-hpat1 21518 21522 AG_2 4
-hpat1 21526 21530 AG_2 4
-hpat1 21549 21553 GA_2 4
-hpat1 21575 21579 GA_2 4
-hpat1 21601 21607 GCA_2 6
-hpat1 21611 21615 AG_2 4
-hpat1 21619 21625 GGC_2 6
-hpat1 21628 21632 AG_2 4
-hpat1 21636 21640 GG_2 4
-hpat1 21669 21673 AC_2 4
-hpat1 21674 21678 GG_2 4
-hpat1 21681 21685 GG_2 4
-hpat1 21699 21705 CTT_2 6
-hpat1 21716 21722 TCT_2 6
-hpat1 21742 21746 GA_2 4
-hpat1 21749 21755 TC_3 6
-hpat1 21777 21787 GCTCT_2 10
-hpat1 21796 21800 GA_2 4
-hpat1 21810 21814 GA_2 4
-hpat1 21818 21822 CA_2 4
-hpat1 21824 21834 GGCTG_2 10
-hpat1 21836 21840 CC_2 4
-hpat1 21841 21845 CC_2 4
-hpat1 21848 21852 CA_2 4
-hpat1 21852 21858 CCT_2 6
-hpat1 21866 21872 CAG_2 6
-hpat1 21876 21886 GCCAG_2 10
-hpat1 21901 21905 CT_2 4
-hpat1 21951 21955 GG_2 4
-hpat1 21957 21961 CT_2 4
-hpat1 22016 22020 CT_2 4
-hpat1 22038 22044 TGC_2 6
-hpat1 22080 22086 CA_3 6
-hpat1 22099 22103 AC_2 4
-hpat1 22106 22112 CA_3 6
-hpat1 22123 22127 GG_2 4
-hpat1 22136 22140 CA_2 4
-hpat1 22141 22145 CC_2 4
-hpat1 22157 22163 GCA_2 6
-hpat1 22174 22178 CT_2 4
-hpat1 22180 22184 AG_2 4
-hpat1 22184 22188 GG_2 4
-hpat1 22192 22196 GA_2 4
-hpat1 22205 22209 GA_2 4
-hpat1 22228 22232 GT_2 4
-hpat1 22250 22254 GG_2 4
-hpat1 22259 22263 CC_2 4
-hpat1 22265 22269 CA_2 4
-hpat1 22292 22296 CT_2 4
-hpat1 22304 22310 ACC_2 6
-hpat1 22316 22320 GT_2 4
-hpat1 22327 22333 CTC_2 6
-hpat1 22344 22350 TCC_2 6
-hpat1 22357 22361 GG_2 4
-hpat1 22372 22376 AT_2 4
-hpat1 22379 22387 CTGC_2 8
-hpat1 22391 22395 CC_2 4
-hpat1 22398 22402 TG_2 4
-hpat1 22415 22421 TG_3 6
-hpat1 22427 22431 TC_2 4
-hpat1 22445 22449 CC_2 4
-hpat1 22458 22462 TG_2 4
-hpat1 22488 22492 GT_2 4
-hpat1 22506 22510 CA_2 4
-hpat1 22513 22517 CC_2 4
-hpat1 22525 22529 TT_2 4
-hpat1 22544 22550 GCA_2 6
-hpat1 22556 22560 CT_2 4
-hpat1 22574 22578 CT_2 4
-hpat1 22583 22589 GT_3 6
-hpat1 22590 22594 AC_2 4
-hpat1 22598 22607 TCC_3 9
-hpat1 22623 22627 CC_2 4
-hpat1 22635 22639 AG_2 4
-hpat1 22652 22656 CA_2 4
-hpat1 22660 22664 CA_2 4
-hpat1 22674 22678 AG_2 4
-hpat1 22700 22708 CGAG_2 8
-hpat1 22710 22716 TG_3 6
-hpat1 22716 22722 GC_3 6
-hpat1 22728 22732 GA_2 4
-hpat1 22736 22740 AG_2 4
-hpat1 22748 22752 GG_2 4
-hpat1 22767 22776 AGG_3 9
-hpat1 22776 22780 GT_2 4
-hpat1 22784 22790 TGG_2 6
-hpat1 22791 22795 GG_2 4
-hpat1 22798 22802 GA_2 4
-hpat1 22806 22810 AG_2 4
-hpat1 22810 22814 GC_2 4
-hpat1 22818 22822 GG_2 4
-hpat1 22833 22841 AGGG_2 8
-hpat1 22846 22850 GT_2 4
-hpat1 22850 22854 GG_2 4
-hpat1 22854 22860 TGG_2 6
-hpat1 22861 22865 GG_2 4
-hpat1 22872 22876 CT_2 4
-hpat1 22897 22901 TC_2 4
-hpat1 22910 22918 GAAT_2 8
+hpat1 20147 20159 GGTGGT_2 12
+hpat1 22834 22846 GGGAGG_2 12
hpat1 22938 22950 AAGCCA_2 12
-hpat1 22953 22959 CCA_2 6
-hpat1 22976 22980 CC_2 4
-hpat1 22981 22987 AG_3 6
-hpat1 22994 22998 CA_2 4
-hpat1 23008 23012 CC_2 4
-hpat1 23050 23056 TG_3 6
-hpat1 23058 23062 GG_2 4
-hpat1 23089 23095 CAG_2 6
-hpat1 23112 23116 GT_2 4
-hpat1 23143 23147 CA_2 4
-hpat1 23151 23159 AGAA_2 8
-hpat1 23159 23163 AA_2 4
-hpat1 23165 23169 AG_2 4
-hpat1 23174 23178 TC_2 4
-hpat1 23194 23198 GG_2 4
-hpat1 23198 23204 CCA_2 6
-hpat1 23210 23214 GT_2 4
-hpat1 23222 23226 TT_2 4
-hpat1 23226 23234 CTGG_2 8
-hpat1 23235 23239 GA_2 4
-hpat1 23248 23254 CTG_2 6
-hpat1 23261 23267 TCC_2 6
-hpat1 23269 23273 CA_2 4
-hpat1 23328 23332 AC_2 4
-hpat1 23353 23357 CT_2 4
-hpat1 23369 23373 CA_2 4
-hpat1 23373 23377 GG_2 4
-hpat1 23381 23389 GGGA_2 8
-hpat1 23392 23396 GA_2 4
-hpat1 23398 23402 GG_2 4
-hpat1 23412 23418 GCT_2 6
-hpat1 23433 23437 CA_2 4
-hpat1 23440 23444 GA_2 4
-hpat1 23468 23472 AC_2 4
-hpat1 23478 23484 CAA_2 6
-hpat1 23494 23498 AA_2 4
-hpat1 23510 23516 ATT_2 6
-hpat1 23520 23526 AG_3 6
-hpat1 23541 23545 AA_2 4
-hpat1 23548 23552 CG_2 4
-hpat1 23562 23566 GG_2 4
-hpat1 23593 23597 TC_2 4
-hpat1 23608 23614 ATT_2 6
-hpat1 23617 23623 CTG_2 6
-hpat1 23628 23632 GG_2 4
-hpat1 23632 23636 AA_2 4
-hpat1 23639 23645 GCA_2 6
-hpat1 23652 23656 TC_2 4
-hpat1 23660 23666 CAG_2 6
-hpat1 23685 23689 AA_2 4
-hpat1 23712 23716 GG_2 4
-hpat1 23719 23725 GGA_2 6
-hpat1 23725 23729 GA_2 4
-hpat1 23731 23735 AT_2 4
-hpat1 23738 23742 AA_2 4
-hpat1 23744 23748 AG_2 4
-hpat1 23758 23762 CA_2 4
-hpat1 23763 23767 CC_2 4
-hpat1 23773 23777 CA_2 4
-hpat1 23821 23825 AG_2 4
-hpat1 23825 23833 TCCA_2 8
-hpat1 23834 23842 TTCA_2 8
-hpat1 23842 23846 AC_2 4
-hpat1 23854 23858 AA_2 4
-hpat1 23860 23864 GG_2 4
-hpat1 23868 23874 CA_3 6
-hpat1 23874 23878 GG_2 4
-hpat1 23919 23923 TT_2 4
-hpat1 23931 23935 AG_2 4
-hpat1 23976 23980 TG_2 4
-hpat1 23996 24000 TT_2 4
-hpat1 24000 24004 AA_2 4
-hpat1 24012 24016 TA_2 4
-hpat1 24017 24021 AT_2 4
-hpat1 24040 24044 TT_2 4
-hpat1 24046 24050 AC_2 4
-hpat1 24059 24065 GAA_2 6
-hpat1 24087 24091 TA_2 4
-hpat1 24100 24104 GG_2 4
-hpat1 24106 24110 AA_2 4
-hpat1 24126 24130 AA_2 4
-hpat1 24137 24141 GA_2 4
-hpat1 24149 24155 CA_3 6
-hpat1 24158 24162 CC_2 4
-hpat1 24163 24167 CC_2 4
-hpat1 24167 24173 TCT_2 6
-hpat1 24183 24189 CTT_2 6
-hpat1 24194 24200 CAG_2 6
-hpat1 24210 24216 CT_3 6
-hpat1 24221 24227 CCA_2 6
-hpat1 24230 24234 AA_2 4
-hpat1 24235 24239 AG_2 4
-hpat1 24275 24279 TC_2 4
-hpat1 24282 24286 CA_2 4
-hpat1 24288 24292 CA_2 4
-hpat1 24309 24315 CA_3 6
-hpat1 24318 24322 AG_2 4
-hpat1 24324 24328 CT_2 4
-hpat1 24333 24337 CC_2 4
-hpat1 24372 24376 TC_2 4
-hpat1 24389 24393 GG_2 4
-hpat1 24398 24402 TG_2 4
-hpat1 24407 24413 GCT_2 6
-hpat1 24444 24448 TC_2 4
-hpat1 24449 24455 AGG_2 6
-hpat1 24456 24462 TGA_2 6
-hpat1 24468 24474 TGA_2 6
-hpat1 24476 24480 GA_2 4
-hpat1 24491 24495 TG_2 4
-hpat1 24533 24537 CT_2 4
-hpat1 24541 24545 AT_2 4
-hpat1 24560 24564 AT_2 4
-hpat1 24565 24569 AA_2 4
-hpat1 24573 24577 AA_2 4
-hpat1 24590 24594 GA_2 4
-hpat1 24625 24629 AG_2 4
-hpat1 24644 24648 TC_2 4
-hpat1 24657 24669 AA_6 12
-hpat1 24676 24682 AAC_2 6
-hpat1 24715 24719 CA_2 4
-hpat1 24720 24724 GC_2 4
-hpat1 24729 24733 GG_2 4
-hpat1 24736 24740 CC_2 4
-hpat1 24768 24774 AGA_2 6
-hpat1 24783 24787 GG_2 4
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-hpat1 24802 24806 AG_2 4
-hpat1 24811 24815 GA_2 4
-hpat1 24831 24837 TTG_2 6
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-hpat1 24859 24863 TC_2 4
-hpat1 24870 24874 CA_2 4
-hpat1 24919 24925 GCA_2 6
-hpat1 24934 24938 TC_2 4
-hpat1 24966 24970 TG_2 4
-hpat1 24994 24998 GG_2 4
-hpat1 25007 25013 TGA_2 6
-hpat1 25034 25038 GG_2 4
-hpat1 25048 25056 TTTG_2 8
-hpat1 25076 25086 CTTGG_2 10
-hpat1 25098 25106 AGGT_2 8
-hpat1 25160 25166 AG_3 6
-hpat1 25174 25178 CT_2 4
-hpat1 25218 25222 GC_2 4
-hpat1 25226 25230 TC_2 4
-hpat1 25247 25251 CT_2 4
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-hpat1 25308 25312 CC_2 4
-hpat1 25346 25350 AG_2 4
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-hpat1 25385 25391 GAC_2 6
-hpat1 25391 25395 AC_2 4
-hpat1 25398 25402 CA_2 4
-hpat1 25424 25428 GG_2 4
-hpat1 25441 25445 AT_2 4
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-hpat1 25462 25466 CA_2 4
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-hpat1 25547 25551 AA_2 4
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-hpat1 25651 25655 GG_2 4
-hpat1 25657 25663 GAA_2 6
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hpat1 25689 25701 ATTCAC_2 12
-hpat1 25705 25709 TC_2 4
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-hpat1 25718 25722 CT_2 4
-hpat1 25729 25733 CC_2 4
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-hpat1 25895 25901 GGA_2 6
-hpat1 25912 25916 GG_2 4
-hpat1 25919 25923 GG_2 4
-hpat1 25925 25931 AGG_2 6
-hpat1 25933 25937 GG_2 4
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-hpat1 25948 25952 AG_2 4
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-hpat1 25966 25974 AAAG_2 8
-hpat1 25978 25984 GGA_2 6
-hpat1 25992 25996 AG_2 4
-hpat1 26002 26006 AG_2 4
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-hpat1 26061 26065 AG_2 4
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-hpat1 26113 26121 CA_4 8
-hpat1 26128 26136 TTCC_2 8
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-hpat1 26257 26261 GG_2 4
-hpat1 26266 26270 AG_2 4
-hpat1 26270 26274 GG_2 4
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-hpat1 26354 26360 GCA_2 6
-hpat1 26364 26370 AGG_2 6
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-hpat1 26427 26431 CA_2 4
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-hpat1 26470 26474 GA_2 4
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-hpat1 26479 26485 TGG_2 6
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-hpat1 26572 26578 AA_3 6
-hpat1 26592 26596 AA_2 4
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-hpat1 26674 26680 TCA_2 6
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-hpat1 26729 26735 GTC_2 6
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-hpat1 26759 26767 CCCT_2 8
-hpat1 26777 26781 CC_2 4
-hpat1 26795 26799 CC_2 4
-hpat1 26802 26806 CA_2 4
-hpat1 26831 26835 GT_2 4
-hpat1 26847 26855 CT_4 8
-hpat1 26857 26863 CTT_2 6
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-hpat1 26902 26906 CT_2 4
-hpat1 26916 26926 CCCTG_2 10
-hpat1 26929 26933 AA_2 4
-hpat1 26939 26943 CA_2 4
-hpat1 26951 26955 AC_2 4
-hpat1 27001 27009 ACTC_2 8
-hpat1 27016 27020 CT_2 4
-hpat1 27020 27028 TCAC_2 8
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-hpat1 27227 27231 CC_2 4
-hpat1 27231 27235 TG_2 4
-hpat1 27237 27245 GGCC_2 8
-hpat1 27255 27261 ACC_2 6
-hpat1 27263 27267 AC_2 4
-hpat1 27279 27283 CA_2 4
-hpat1 27290 27296 CT_3 6
-hpat1 27308 27312 CC_2 4
-hpat1 27322 27326 CC_2 4
-hpat1 27341 27345 AT_2 4
-hpat1 27361 27367 CC_3 6
-hpat1 27387 27391 TG_2 4
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-hpat1 27410 27414 CT_2 4
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-hpat1 27470 27476 TC_3 6
-hpat1 27492 27496 AG_2 4
-hpat1 27504 27508 GG_2 4
-hpat1 27513 27517 CA_2 4
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-hpat1 27542 27546 TG_2 4
-hpat1 27553 27557 CC_2 4
-hpat1 27560 27564 CC_2 4
-hpat1 27615 27619 GT_2 4
-hpat1 27626 27632 GGA_2 6
-hpat1 27635 27639 GG_2 4
-hpat1 27639 27643 AC_2 4
-hpat1 27645 27649 GA_2 4
-hpat1 27659 27665 CTG_2 6
-hpat1 27675 27679 TG_2 4
-hpat1 27699 27703 GA_2 4
-hpat1 27735 27741 AAG_2 6
-hpat1 27752 27760 GGAA_2 8
-hpat1 27763 27767 AA_2 4
-hpat1 27781 27787 CAT_2 6
-hpat1 27806 27812 GCT_2 6
-hpat1 27827 27831 TT_2 4
-hpat1 27846 27850 GG_2 4
-hpat1 27866 27872 CCA_2 6
-hpat1 27885 27891 TC_3 6
-hpat1 27893 27897 CT_2 4
-hpat1 27904 27908 GA_2 4
-hpat1 27914 27918 CG_2 4
-hpat1 27936 27944 CAAT_2 8
-hpat1 27953 27957 TG_2 4
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-hpat1 27977 27981 AC_2 4
-hpat1 27982 27986 GT_2 4
-hpat1 27990 27994 CA_2 4
-hpat1 28003 28007 TC_2 4
-hpat1 28030 28034 CA_2 4
-hpat1 28034 28040 TGG_2 6
-hpat1 28040 28044 AG_2 4
-hpat1 28104 28108 GA_2 4
-hpat1 28117 28125 CCCT_2 8
-hpat1 28129 28133 TG_2 4
-hpat1 28134 28140 CAG_2 6
-hpat1 28144 28148 GA_2 4
-hpat1 28151 28155 CA_2 4
-hpat1 28165 28171 GCA_2 6
-hpat1 28200 28204 CT_2 4
-hpat1 28207 28217 CATCC_2 10
-hpat1 28224 28228 GG_2 4
-hpat1 28258 28268 CAGGA_2 10
-hpat1 28281 28285 AA_2 4
-hpat1 28301 28305 AG_2 4
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-hpat1 28340 28344 AC_2 4
-hpat1 28361 28365 TT_2 4
-hpat1 28390 28394 GG_2 4
-hpat1 28398 28402 CA_2 4
-hpat1 28417 28421 CT_2 4
-hpat1 28435 28439 CT_2 4
-hpat1 28458 28462 CA_2 4
-hpat1 28467 28471 CA_2 4
-hpat1 28479 28483 CA_2 4
-hpat1 28513 28519 TGG_2 6
-hpat1 28546 28550 GT_2 4
-hpat1 28576 28580 AC_2 4
-hpat1 28633 28637 TT_2 4
-hpat1 28639 28649 TTAAT_2 10
-hpat1 28655 28661 AAT_2 6
-hpat1 28678 28684 ATT_2 6
-hpat1 28686 28690 CA_2 4
-hpat1 28694 28698 CA_2 4
-hpat1 28701 28705 GA_2 4
-hpat1 28705 28709 AC_2 4
-hpat1 28717 28721 AG_2 4
-hpat1 28721 28731 GGGTT_2 10
-hpat1 28743 28752 AGA_3 9
-hpat1 28757 28761 GG_2 4
-hpat1 28797 28801 CC_2 4
-hpat1 28813 28821 GTGC_2 8
-hpat1 28853 28857 GG_2 4
-hpat1 28874 28878 GG_2 4
-hpat1 28892 28896 AG_2 4
-hpat1 28916 28922 AGA_2 6
-hpat1 28945 28949 GG_2 4
-hpat1 28970 28980 GGGAC_2 10
-hpat1 28985 28989 GG_2 4
-hpat1 29003 29007 GA_2 4
-hpat1 29026 29030 CA_2 4
-hpat1 29041 29045 GG_2 4
-hpat1 29052 29056 TG_2 4
-hpat1 29063 29067 GT_2 4
-hpat1 29081 29085 GA_2 4
-hpat1 29126 29130 TG_2 4
-hpat1 29140 29144 CC_2 4
-hpat1 29157 29163 AA_3 6
-hpat1 29170 29174 AC_2 4
-hpat1 29177 29185 TCAC_2 8
-hpat1 29198 29202 AC_2 4
-hpat1 29229 29233 TG_2 4
-hpat1 29241 29245 GC_2 4
-hpat1 29254 29260 AAG_2 6
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-hpat1 29278 29286 CCTC_2 8
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-hpat1 29328 29334 TCC_2 6
-hpat1 29353 29357 TG_2 4
-hpat1 29357 29363 CTT_2 6
-hpat1 29372 29378 TTC_2 6
-hpat1 29426 29430 CA_2 4
-hpat1 29439 29449 CCTGA_2 10
-hpat1 29478 29482 CA_2 4
-hpat1 29490 29494 TC_2 4
-hpat1 29510 29516 TAA_2 6
-hpat1 29528 29532 GG_2 4
-hpat1 29558 29562 CT_2 4
-hpat1 29576 29582 TC_3 6
-hpat1 29590 29594 TG_2 4
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-hpat1 29610 29614 TA_2 4
-hpat1 29618 29622 GA_2 4
-hpat1 29645 29649 GT_2 4
-hpat1 29685 29689 TA_2 4
-hpat1 29690 29694 TA_2 4
-hpat1 29697 29701 AT_2 4
-hpat1 29711 29715 AA_2 4
-hpat1 29715 29721 TAT_2 6
-hpat1 29734 29738 CA_2 4
-hpat1 29747 29753 GAA_2 6
-hpat1 29781 29787 TC_3 6
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-hpat1 29809 29813 GA_2 4
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-hpat1 29844 29848 AG_2 4
-hpat1 29853 29857 CA_2 4
-hpat1 29865 29869 CA_2 4
-hpat1 29875 29881 CTG_2 6
-hpat1 29886 29890 AT_2 4
-hpat1 29892 29900 GCTG_2 8
-hpat1 29904 29908 AA_2 4
-hpat1 29932 29938 GGA_2 6
-hpat1 29949 29953 TG_2 4
-hpat1 29953 29957 AG_2 4
-hpat1 29958 29962 AG_2 4
-hpat1 29962 29968 CCA_2 6
-hpat1 29977 29983 AGG_2 6
-hpat1 29989 29993 GG_2 4
-hpat1 30007 30011 CT_2 4
-hpat1 30026 30030 AA_2 4
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-hpat1 30277 30285 CTGG_2 8
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-hpat1 30376 30384 CCAC_2 8
-hpat1 30385 30391 ACC_2 6
-hpat1 30393 30405 CACC_3 12
-hpat1 30415 30421 GTG_2 6
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-hpat1 31111 31121 TGATT_2 10
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-hpat1 31280 31284 AC_2 4
-hpat1 31286 31294 GTAG_2 8
-hpat1 31294 31302 GGAT_2 8
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-hpat1 31512 31516 CC_2 4
-hpat1 31516 31522 CTG_2 6
-hpat1 31526 31530 CC_2 4
-hpat1 31532 31540 CCCT_2 8
-hpat1 31545 31551 CCT_2 6
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-hpat1 31574 31580 TCC_2 6
-hpat1 31621 31627 TCA_2 6
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-hpat1 31903 31915 GT_6 12
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-hpat1 32132 32142 AAATT_2 10
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-hpat1 32246 32250 GC_2 4
-hpat1 32289 32297 AGGC_2 8
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-hpat1 32360 32364 AA_2 4
-hpat1 32368 32372 AA_2 4
-hpat1 32382 32391 GTG_3 9
-hpat1 32423 32431 AGGA_2 8
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-hpat1 32475 32479 CG_2 4
-hpat1 32499 32505 CAA_2 6
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-hpat1 32803 32807 GA_2 4
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-hpat1 32990 32994 AT_2 4
-hpat1 32994 33004 TTCTT_2 10
-hpat1 33004 33012 TTTC_2 8
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-hpat1 33022 33026 GT_2 4
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-hpat1 33054 33058 CT_2 4
-hpat1 33061 33065 GG_2 4
-hpat1 33068 33072 GA_2 4
-hpat1 33086 33090 CT_2 4
-hpat1 33102 33106 AA_2 4
-hpat1 33109 33115 ATC_2 6
-hpat1 33127 33131 TT_2 4
-hpat1 33135 33139 CC_2 4
-hpat1 33139 33145 TTC_2 6
-hpat1 33146 33150 TA_2 4
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hpat1 50734 50749 TCCAT_3 15
hpat1 50749 50764 TCCAC_3 15
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hpat1 50774 50794 TCCAT_4 20
hpat1 50799 50814 TCCAC_3 15
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hpat1 50834 50849 TCCAC_3 15
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hpat1 50917 50932 ATTCC_3 15
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hpat1 51009 51024 TCCAC_3 15
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hpat1 51152 51172 ATTCC_4 20
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hpat1 51264 51279 TCCAC_3 15
hpat1 51280 51295 CCATT_3 15
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hpat1 51367 51382 ACTCC_3 15
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hpat1 51538 51553 TCCAT_3 15
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hpat1 51673 51688 TCCAT_3 15
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hpat1 51763 51778 TCCAC_3 15
hpat1 51788 51803 TCCAC_3 15
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hpat1 51918 51933 TCCAC_3 15
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hpat1 52083 52098 TCCAC_3 15
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hpat1 53675 53687 TTTCAG_2 12
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-hpat1 58963 58967 GA_2 4
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+hpat1 73890 73922 ACAC_8 32
+hpat1 74872 74884 TCTCTT_2 12
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hpat1 81768 81780 CAAAAA_2 12
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-hpat1 82025 82033 TTCA_2 8
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-hpat1 83072 83080 GGTT_2 8
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hpat1 87244 87256 TTTCTG_2 12
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-hpat1 111665 111669 TT_2 4
-hpat1 111669 111679 AAATT_2 10
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-hpat1 111692 111698 AAT_2 6
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-hpat1 111873 111877 AC_2 4
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hpat1 111898 111910 CATGTG_2 12
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-hpat1 111972 111978 GGT_2 6
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hpat1 112078 112090 ACCTCC_2 12
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-hpat1 112389 112393 TT_2 4
-hpat1 112401 112405 TT_2 4
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-hpat1 112657 112661 AA_2 4
-hpat1 112664 112670 AAG_2 6
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-hpat1 112718 112722 AA_2 4
-hpat1 112723 112727 GT_2 4
-hpat1 112755 112759 GA_2 4
hpat1 112759 112771 AGAAAG_2 12
-hpat1 112777 112783 AA_3 6
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-hpat1 112789 112793 AA_2 4
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-hpat1 112802 112806 AA_2 4
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-hpat1 112848 112852 GT_2 4
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-hpat1 112939 112945 CTA_2 6
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-hpat1 113165 113169 AA_2 4
-hpat1 113173 113177 AC_2 4
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-hpat1 113212 113216 GA_2 4
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-hpat1 113224 113228 AC_2 4
-hpat1 113228 113238 AGGGA_2 10
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-hpat1 113261 113265 GG_2 4
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-hpat1 113356 113360 CA_2 4
-hpat1 113392 113396 CA_2 4
-hpat1 113415 113425 TAAAA_2 10
-hpat1 113425 113433 AGAA_2 8
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hpat1 113452 113464 GAAAAA_2 12
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hpat1 113688 113700 ATGTGT_2 12
-hpat1 113702 113706 AA_2 4
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-hpat1 113762 113766 TT_2 4
-hpat1 113772 113776 TA_2 4
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-hpat1 113799 113803 GA_2 4
-hpat1 113810 113814 TT_2 4
-hpat1 113827 113831 TT_2 4
-hpat1 113837 113841 AT_2 4
hpat1 113843 113855 TTTGTT_2 12
-hpat1 113859 113867 TT_4 8
-hpat1 113927 113931 TT_2 4
-hpat1 113937 113941 TG_2 4
-hpat1 113942 113946 TT_2 4
-hpat1 113954 113958 AA_2 4
-hpat1 113983 113987 GT_2 4
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-hpat1 113997 114006 TCT_3 9
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-hpat1 114050 114054 TT_2 4
-hpat1 114062 114066 TT_2 4
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-hpat1 114210 114218 ATTT_2 8
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-hpat1 114545 114553 TTTG_2 8
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-hpat1 114577 114581 GT_2 4
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-hpat1 114594 114600 TTG_2 6
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-hpat1 114638 114644 TT_3 6
-hpat1 114667 114673 CTT_2 6
-hpat1 114679 114685 TT_3 6
-hpat1 114694 114700 ATT_2 6
-hpat1 114703 114707 AT_2 4
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-hpat1 114721 114727 TT_3 6
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-hpat1 114777 114781 AG_2 4
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-hpat1 114786 114792 TGG_2 6
-hpat1 114808 114816 TAAA_2 8
-hpat1 114832 114836 AG_2 4
-hpat1 114841 114849 AGTT_2 8
-hpat1 114880 114886 TT_3 6
-hpat1 114896 114900 CT_2 4
-hpat1 114932 114938 ATG_2 6
-hpat1 114948 114954 TCT_2 6
-hpat1 114972 114982 AAAGG_2 10
-hpat1 114985 114989 CT_2 4
-hpat1 114990 114994 GG_2 4
-hpat1 114994 115000 GAG_2 6
-hpat1 115050 115056 AGA_2 6
-hpat1 115094 115098 TC_2 4
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-hpat1 115136 115142 GC_3 6
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-hpat1 115194 115198 GC_2 4
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-hpat1 115209 115213 GT_2 4
-hpat1 115227 115235 AAAG_2 8
-hpat1 115244 115250 AC_3 6
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-hpat1 115406 115412 GGC_2 6
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-hpat1 115427 115431 GG_2 4
-hpat1 115431 115439 CGCC_2 8
-hpat1 115448 115456 GCTT_2 8
-hpat1 115466 115472 AGC_2 6
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-hpat1 115539 115543 CT_2 4
-hpat1 115543 115547 GG_2 4
-hpat1 115553 115557 CA_2 4
-hpat1 115558 115566 ACAA_2 8
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-hpat1 115618 115624 AG_3 6
-hpat1 115631 115635 TC_2 4
-hpat1 115649 115653 GA_2 4
-hpat1 115656 115660 GA_2 4
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-hpat1 115747 115751 AC_2 4
-hpat1 115753 115757 CA_2 4
-hpat1 115793 115801 CTGT_2 8
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-hpat1 115814 115822 AACA_2 8
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-hpat1 115840 115844 AA_2 4
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-hpat1 115995 116003 TGGA_2 8
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-hpat1 116063 116069 GGA_2 6
-hpat1 116086 116092 AAG_2 6
-hpat1 116095 116099 AA_2 4
-hpat1 116104 116110 AA_3 6
-hpat1 116114 116120 AGA_2 6
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-hpat1 116144 116148 AG_2 4
-hpat1 116175 116179 AA_2 4
-hpat1 116188 116192 GA_2 4
-hpat1 116199 116205 GAA_2 6
-hpat1 116238 116244 GAA_2 6
-hpat1 116263 116273 ATGAA_2 10
-hpat1 116284 116288 GA_2 4
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-hpat1 117949 117953 AA_2 4
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-hpat1 118245 118249 AA_2 4
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-hpat1 118275 118279 AC_2 4
-hpat1 118281 118285 AC_2 4
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-hpat1 118550 118556 AA_3 6
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-hpat1 118571 118575 AT_2 4
-hpat1 118578 118584 TGA_2 6
-hpat1 118594 118598 AA_2 4
-hpat1 118607 118611 AA_2 4
-hpat1 118628 118634 CAG_2 6
-hpat1 118634 118638 CA_2 4
-hpat1 118640 118644 AA_2 4
-hpat1 118651 118657 CCA_2 6
-hpat1 118698 118702 AT_2 4
-hpat1 118702 118706 AC_2 4
-hpat1 118728 118732 AT_2 4
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-hpat1 118748 118752 AA_2 4
-hpat1 118754 118758 CA_2 4
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-hpat1 118779 118783 AA_2 4
-hpat1 118793 118797 AA_2 4
-hpat1 118799 118805 CAA_2 6
-hpat1 118816 118820 AA_2 4
-hpat1 118821 118825 CT_2 4
-hpat1 118856 118860 AA_2 4
-hpat1 118860 118866 TAA_2 6
-hpat1 118869 118877 CTAT_2 8
-hpat1 118885 118889 CA_2 4
-hpat1 118893 118897 AT_2 4
-hpat1 118911 118915 AA_2 4
-hpat1 118934 118938 AA_2 4
-hpat1 118942 118946 CA_2 4
-hpat1 118959 118965 CT_3 6
-hpat1 118965 118971 CAC_2 6
-hpat1 118985 118989 GT_2 4
-hpat1 119011 119019 CAGG_2 8
-hpat1 119047 119051 AA_2 4
-hpat1 119078 119084 GAC_2 6
-hpat1 119100 119104 AA_2 4
-hpat1 119104 119108 CC_2 4
-hpat1 119112 119116 TC_2 4
-hpat1 119121 119125 AA_2 4
-hpat1 119125 119129 TC_2 4
-hpat1 119157 119161 TC_2 4
-hpat1 119168 119172 AA_2 4
-hpat1 119181 119185 AA_2 4
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-hpat1 119321 119325 GA_2 4
-hpat1 119350 119354 AA_2 4
-hpat1 119360 119368 ACAA_2 8
-hpat1 119371 119377 GAA_2 6
-hpat1 119397 119403 GAA_2 6
-hpat1 119406 119410 AT_2 4
-hpat1 119414 119418 AA_2 4
-hpat1 119458 119462 CC_2 4
-hpat1 119480 119486 TTC_2 6
-hpat1 119496 119502 AA_3 6
-hpat1 119516 119520 AT_2 4
-hpat1 119526 119532 AA_3 6
-hpat1 119562 119566 AA_2 4
-hpat1 119584 119588 CA_2 4
-hpat1 119604 119608 TA_2 4
-hpat1 119627 119631 AA_2 4
hpat1 119636 119648 TGGTAC_2 12
-hpat1 119649 119653 AA_2 4
-hpat1 119654 119658 AG_2 4
-hpat1 119671 119681 GAACA_2 10
-hpat1 119700 119704 CA_2 4
-hpat1 119735 119739 GA_2 4
-hpat1 119739 119743 AA_2 4
-hpat1 119751 119755 GG_2 4
-hpat1 119770 119776 TAA_2 6
-hpat1 119787 119791 AA_2 4
-hpat1 119800 119804 AT_2 4
-hpat1 119825 119833 CCTT_2 8
-hpat1 119833 119837 AC_2 4
-hpat1 119839 119843 TA_2 4
-hpat1 119844 119848 AA_2 4
-hpat1 119887 119891 AA_2 4
-hpat1 119895 119899 AA_2 4
-hpat1 119904 119910 AGA_2 6
-hpat1 119962 119966 AA_2 4
-hpat1 119970 119974 AA_2 4
-hpat1 119981 119987 CAA_2 6
-hpat1 119992 119996 AA_2 4
-hpat1 120023 120027 AG_2 4
-hpat1 120033 120037 CA_2 4
-hpat1 120039 120043 AA_2 4
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-hpat1 150048 150052 GA_2 4
-hpat1 150058 150066 GTTT_2 8
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-hpat1 150079 150087 AT_4 8
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-hpat1 150124 150130 ACT_2 6
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-hpat1 150167 150175 AAAT_2 8
-hpat1 150185 150217 AC_16 32
-hpat1 150219 150225 AC_3 6
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-hpat1 150235 150241 AC_3 6
-hpat1 150243 150249 AT_3 6
-hpat1 150263 150269 TT_3 6
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-hpat1 150286 150290 TT_2 4
-hpat1 150299 150303 AA_2 4
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-hpat1 150320 150324 CA_2 4
-hpat1 150329 150333 GT_2 4
-hpat1 150341 150347 TT_3 6
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-hpat1 150359 150369 CTTTT_2 10
-hpat1 150398 150402 TA_2 4
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-hpat1 150411 150419 CCTT_2 8
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-hpat1 150427 150431 AT_2 4
-hpat1 150431 150435 GA_2 4
-hpat1 150452 150458 TC_3 6
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-hpat1 150481 150485 CA_2 4
-hpat1 150487 150491 TT_2 4
-hpat1 150493 150497 AT_2 4
-hpat1 150497 150501 AG_2 4
-hpat1 150518 150522 TA_2 4
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-hpat1 150534 150538 TC_2 4
-hpat1 150551 150555 AT_2 4
-hpat1 150562 150566 AT_2 4
-hpat1 150570 150576 TA_3 6
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-hpat1 150621 150625 TA_2 4
-hpat1 150630 150634 AT_2 4
-hpat1 150654 150658 AT_2 4
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-hpat1 150695 150699 AA_2 4
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-hpat1 150719 150725 AC_3 6
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-hpat1 150770 150774 TA_2 4
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-hpat1 150821 150825 CT_2 4
-hpat1 150832 150838 TTC_2 6
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-hpat1 150877 150881 TT_2 4
-hpat1 150900 150906 ATT_2 6
-hpat1 150916 150922 ATC_2 6
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-hpat1 150932 150936 CT_2 4
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-hpat1 150948 150952 AA_2 4
-hpat1 150954 150962 GAAA_2 8
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-hpat1 150981 150989 GTAT_2 8
-hpat1 150993 150997 TT_2 4
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-hpat1 151011 151015 TT_2 4
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-hpat1 151038 151042 AA_2 4
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-hpat1 151061 151067 TT_3 6
-hpat1 151070 151074 TT_2 4
-hpat1 151103 151107 CC_2 4
-hpat1 151129 151135 AAC_2 6
-hpat1 151135 151139 AA_2 4
-hpat1 151156 151160 TC_2 4
-hpat1 151172 151178 TA_3 6
-hpat1 151196 151202 GTA_2 6
-hpat1 151203 151209 TCT_2 6
-hpat1 151227 151233 ATT_2 6
-hpat1 151238 151244 TCT_2 6
-hpat1 151251 151257 CT_3 6
-hpat1 151268 151272 TC_2 4
-hpat1 151277 151285 TT_4 8
-hpat1 151288 151292 TA_2 4
-hpat1 151305 151309 GT_2 4
-hpat1 151313 151321 CTTA_2 8
-hpat1 151321 151327 TCT_2 6
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-hpat1 151334 151342 AATA_2 8
-hpat1 151342 151346 AT_2 4
-hpat1 151348 151358 ATCCC_2 10
-hpat1 151379 151383 TT_2 4
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-hpat1 151403 151411 ACTC_2 8
-hpat1 151421 151425 CT_2 4
-hpat1 151426 151430 AT_2 4
-hpat1 151435 151439 AT_2 4
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-hpat1 151478 151484 TTA_2 6
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-hpat1 151535 151539 AC_2 4
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-hpat1 151553 151557 CA_2 4
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-hpat1 151605 151609 AT_2 4
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-hpat1 151618 151622 AT_2 4
-hpat1 151623 151627 AC_2 4
-hpat1 151630 151636 AAT_2 6
-hpat1 151636 151640 TA_2 4
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-hpat1 151663 151667 GG_2 4
-hpat1 151668 151672 CC_2 4
-hpat1 151673 151679 CC_3 6
-hpat1 151693 151697 TA_2 4
-hpat1 151701 151705 TG_2 4
-hpat1 151723 151727 CA_2 4
-hpat1 151731 151737 AGG_2 6
-hpat1 151739 151745 AGC_2 6
-hpat1 151761 151767 ACC_2 6
-hpat1 151771 151775 CT_2 4
-hpat1 151776 151782 CCT_2 6
-hpat1 151793 151797 TG_2 4
-hpat1 151806 151810 TC_2 4
-hpat1 151829 151833 TG_2 4
-hpat1 151838 151842 CA_2 4
-hpat1 151869 151873 GA_2 4
-hpat1 151883 151889 TGA_2 6
-hpat1 151945 151949 AA_2 4
-hpat1 151979 151983 AA_2 4
-hpat1 151988 151992 GG_2 4
-hpat1 152007 152011 AC_2 4
-hpat1 152015 152019 AA_2 4
-hpat1 152021 152025 AA_2 4
-hpat1 152041 152045 TT_2 4
-hpat1 152045 152049 AA_2 4
-hpat1 152056 152060 CT_2 4
-hpat1 152068 152072 CA_2 4
-hpat1 152072 152080 AA_4 8
-hpat1 152102 152108 AT_3 6
-hpat1 152113 152117 GT_2 4
-hpat1 152117 152123 ACA_2 6
-hpat1 152128 152132 TT_2 4
-hpat1 152138 152144 TGT_2 6
-hpat1 152154 152158 AT_2 4
-hpat1 152172 152176 AC_2 4
-hpat1 152178 152184 TCA_2 6
-hpat1 152184 152188 TC_2 4
-hpat1 152202 152212 TG_5 10
-hpat1 152217 152221 AG_2 4
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-hpat1 152229 152235 TT_3 6
-hpat1 152238 152242 AA_2 4
-hpat1 152251 152255 AA_2 4
-hpat1 152255 152259 TA_2 4
-hpat1 152259 152263 AT_2 4
-hpat1 152292 152296 CT_2 4
-hpat1 152300 152306 TT_3 6
-hpat1 152324 152330 TT_3 6
-hpat1 152345 152351 TC_3 6
-hpat1 152354 152362 TTCC_2 8
-hpat1 152370 152374 CA_2 4
-hpat1 152374 152378 CC_2 4
-hpat1 152388 152392 CA_2 4
-hpat1 152396 152400 TC_2 4
-hpat1 152402 152406 TC_2 4
-hpat1 152423 152431 TT_4 8
-hpat1 152432 152436 TT_2 4
-hpat1 152447 152451 TA_2 4
-hpat1 152468 152472 TT_2 4
-hpat1 152478 152482 TG_2 4
-hpat1 152507 152513 TTC_2 6
-hpat1 152516 152524 TTCA_2 8
-hpat1 152544 152548 TC_2 4
-hpat1 152549 152553 TT_2 4
-hpat1 152556 152560 AG_2 4
-hpat1 152562 152568 AAT_2 6
-hpat1 152575 152587 TG_6 12
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-hpat1 152628 152632 AA_2 4
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-hpat1 152642 152646 TG_2 4
-hpat1 152646 152652 AAT_2 6
-hpat1 152657 152665 AATA_2 8
-hpat1 152680 152684 CT_2 4
-hpat1 152694 152700 GTG_2 6
-hpat1 152700 152710 ATTTC_2 10
-hpat1 152711 152721 TT_5 10
-hpat1 152730 152734 GT_2 4
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-hpat1 152744 152748 CT_2 4
-hpat1 152768 152774 GTG_2 6
-hpat1 152794 152798 TC_2 4
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-hpat1 152853 152861 AC_4 8
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-hpat1 152939 152945 TCC_2 6
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-hpat1 153102 153106 CA_2 4
-hpat1 153123 153127 TA_2 4
-hpat1 153134 153138 TT_2 4
-hpat1 153148 153152 TA_2 4
-hpat1 153172 153176 TC_2 4
-hpat1 153178 153182 TG_2 4
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-hpat1 153214 153218 TT_2 4
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-hpat1 153229 153233 CA_2 4
-hpat1 153235 153241 CTT_2 6
-hpat1 153254 153260 TCT_2 6
-hpat1 153263 153267 GA_2 4
-hpat1 153273 153277 TT_2 4
-hpat1 153291 153297 TT_3 6
-hpat1 153303 153313 GGTTT_2 10
-hpat1 153313 153319 TT_3 6
-hpat1 153345 153351 TA_3 6
-hpat1 153351 153355 TT_2 4
-hpat1 153355 153361 AT_3 6
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-hpat1 153384 153388 AT_2 4
-hpat1 153398 153402 AA_2 4
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-hpat1 153414 153418 TA_2 4
-hpat1 153422 153426 AA_2 4
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-hpat1 153445 153449 AT_2 4
-hpat1 153454 153458 AA_2 4
-hpat1 153466 153470 AA_2 4
-hpat1 153477 153483 TAC_2 6
-hpat1 153497 153501 CA_2 4
-hpat1 153503 153509 AAG_2 6
-hpat1 153522 153526 AA_2 4
-hpat1 153526 153530 TA_2 4
-hpat1 153541 153545 TG_2 4
-hpat1 153568 153572 AA_2 4
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-hpat1 153589 153595 AA_3 6
-hpat1 153595 153599 GA_2 4
-hpat1 153602 153606 AG_2 4
-hpat1 153625 153629 GA_2 4
-hpat1 153629 153633 TT_2 4
-hpat1 153661 153667 AGG_2 6
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-hpat1 153692 153696 AA_2 4
-hpat1 153708 153712 AT_2 4
-hpat1 153720 153724 AG_2 4
-hpat1 153733 153737 AA_2 4
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-hpat1 153764 153768 AC_2 4
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-hpat1 153807 153811 GG_2 4
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-hpat1 153871 153875 CA_2 4
-hpat1 153911 153915 TC_2 4
-hpat1 153921 153931 GAAAA_2 10
-hpat1 153969 153973 AT_2 4
-hpat1 153973 153977 TC_2 4
-hpat1 153993 153997 TC_2 4
-hpat1 154001 154005 CA_2 4
-hpat1 154014 154018 GG_2 4
-hpat1 154024 154028 GT_2 4
-hpat1 154053 154059 AA_3 6
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-hpat1 154077 154081 CA_2 4
-hpat1 154109 154113 CT_2 4
-hpat1 154113 154117 GT_2 4
-hpat1 154123 154129 CAG_2 6
-hpat1 154185 154189 CA_2 4
-hpat1 154232 154236 CA_2 4
-hpat1 154248 154256 TCCC_2 8
-hpat1 154261 154265 CC_2 4
-hpat1 154276 154280 GA_2 4
-hpat1 154286 154292 CAA_2 6
-hpat1 154299 154307 CAAA_2 8
-hpat1 154310 154316 AAC_2 6
-hpat1 154317 154321 GA_2 4
-hpat1 154323 154327 TG_2 4
-hpat1 154327 154331 CC_2 4
-hpat1 154362 154370 CTCA_2 8
-hpat1 154370 154376 AGG_2 6
-hpat1 154376 154380 GA_2 4
-hpat1 154383 154389 CCA_2 6
-hpat1 154410 154414 AG_2 4
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-hpat1 154518 154524 CAA_2 6
-hpat1 154529 154535 AGC_2 6
-hpat1 154555 154559 AA_2 4
-hpat1 154594 154602 CCGG_2 8
-hpat1 154604 154608 AA_2 4
-hpat1 154638 154642 TT_2 4
-hpat1 154642 154648 AA_3 6
-hpat1 154648 154656 GAAA_2 8
-hpat1 154659 154663 TA_2 4
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-hpat1 154718 154722 AT_2 4
-hpat1 154729 154735 TG_3 6
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-hpat1 154741 154747 AA_3 6
-hpat1 154754 154758 TA_2 4
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-hpat1 154791 154795 AA_2 4
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-hpat1 154924 154928 AG_2 4
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-hpat1 154991 154995 CA_2 4
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-hpat1 155035 155041 TGG_2 6
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-hpat1 155064 155068 AA_2 4
-hpat1 155069 155073 TG_2 4
-hpat1 155074 155078 AA_2 4
-hpat1 155082 155090 ATAC_2 8
-hpat1 155097 155107 CA_5 10
-hpat1 155117 155125 TACA_2 8
-hpat1 155128 155132 AA_2 4
-hpat1 155133 155139 TGA_2 6
-hpat1 155161 155165 TA_2 4
-hpat1 155184 155188 TA_2 4
-hpat1 155215 155219 AA_2 4
-hpat1 155221 155225 TA_2 4
-hpat1 155232 155236 TC_2 4
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-hpat1 155264 155268 AA_2 4
-hpat1 155271 155275 TT_2 4
-hpat1 155285 155289 TT_2 4
-hpat1 155300 155304 AT_2 4
-hpat1 155306 155310 TC_2 4
-hpat1 155338 155342 CA_2 4
-hpat1 155345 155349 TC_2 4
-hpat1 155359 155365 ACC_2 6
-hpat1 155365 155369 AT_2 4
-hpat1 155372 155376 TT_2 4
-hpat1 155384 155388 AT_2 4
-hpat1 155392 155396 TG_2 4
-hpat1 155420 155424 TC_2 4
-hpat1 155428 155432 TG_2 4
-hpat1 155435 155439 AT_2 4
-hpat1 155444 155448 AA_2 4
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-hpat1 155466 155470 TA_2 4
-hpat1 155476 155480 CT_2 4
-hpat1 155495 155499 TT_2 4
-hpat1 155502 155506 AC_2 4
-hpat1 155507 155513 CAG_2 6
-hpat1 155544 155548 CA_2 4
-hpat1 155548 155552 AA_2 4
-hpat1 155553 155563 AAATA_2 10
-hpat1 155579 155583 TC_2 4
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-hpat1 155594 155600 AT_3 6
-hpat1 155602 155606 GG_2 4
-hpat1 155616 155620 TA_2 4
-hpat1 155625 155629 AT_2 4
-hpat1 155637 155641 CT_2 4
-hpat1 155656 155662 TTC_2 6
-hpat1 155665 155669 AA_2 4
-hpat1 155671 155677 TC_3 6
-hpat1 155680 155688 TCCT_2 8
-hpat1 155690 155700 AGACT_2 10
-hpat1 155712 155720 CTGA_2 8
-hpat1 155735 155739 GA_2 4
-hpat1 155748 155754 CA_3 6
-hpat1 155758 155762 TT_2 4
-hpat1 155783 155787 CA_2 4
-hpat1 155796 155800 GC_2 4
-hpat1 155801 155805 AT_2 4
-hpat1 155805 155811 TC_3 6
-hpat1 155811 155815 TT_2 4
-hpat1 155822 155828 TTA_2 6
-hpat1 155838 155842 TA_2 4
-hpat1 155845 155849 CA_2 4
-hpat1 155877 155885 CTTT_2 8
-hpat1 155885 155889 CT_2 4
-hpat1 155893 155897 TT_2 4
-hpat1 155906 155910 CA_2 4
-hpat1 155912 155916 TC_2 4
-hpat1 155917 155923 CAT_2 6
-hpat1 155927 155931 AA_2 4
-hpat1 155995 155999 AC_2 4
-hpat1 156007 156011 CA_2 4
-hpat1 156016 156022 GT_3 6
-hpat1 156034 156038 TA_2 4
-hpat1 156058 156064 GAT_2 6
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-hpat1 156086 156090 TT_2 4
-hpat1 156108 156112 AA_2 4
-hpat1 156116 156120 TT_2 4
-hpat1 156121 156127 CTG_2 6
-hpat1 156135 156139 AT_2 4
-hpat1 156149 156153 TT_2 4
-hpat1 156155 156161 TCA_2 6
-hpat1 156167 156173 ACT_2 6
-hpat1 156180 156184 GG_2 4
-hpat1 156195 156199 AG_2 4
-hpat1 156212 156216 TG_2 4
-hpat1 156222 156230 TT_4 8
-hpat1 156233 156239 TT_3 6
-hpat1 156239 156247 GTTT_2 8
-hpat1 156252 156256 TT_2 4
-hpat1 156264 156268 AA_2 4
-hpat1 156268 156276 ATTT_2 8
-hpat1 156284 156292 TATT_2 8
-hpat1 156293 156299 TT_3 6
-hpat1 156302 156306 TT_2 4
-hpat1 156307 156311 TT_2 4
-hpat1 156311 156323 AGTTTT_2 12
-hpat1 156332 156336 TG_2 4
-hpat1 156345 156351 TA_3 6
-hpat1 156370 156374 GT_2 4
-hpat1 156377 156381 GT_2 4
-hpat1 156382 156386 CA_2 4
-hpat1 156389 156393 TT_2 4
-hpat1 156408 156412 AT_2 4
-hpat1 156412 156418 TC_3 6
-hpat1 156418 156422 TT_2 4
-hpat1 156433 156437 AA_2 4
-hpat1 156438 156444 TA_3 6
-hpat1 156444 156448 TT_2 4
-hpat1 156453 156457 TA_2 4
-hpat1 156460 156464 TG_2 4
-hpat1 156467 156471 TT_2 4
-hpat1 156472 156476 AT_2 4
-hpat1 156478 156482 AT_2 4
-hpat1 156484 156488 AT_2 4
-hpat1 156494 156498 TA_2 4
-hpat1 156508 156512 TT_2 4
-hpat1 156519 156523 AT_2 4
-hpat1 156525 156529 AT_2 4
-hpat1 156535 156539 TA_2 4
-hpat1 156549 156553 TT_2 4
-hpat1 156560 156564 AT_2 4
-hpat1 156566 156570 AT_2 4
-hpat1 156576 156580 TA_2 4
-hpat1 156590 156594 TT_2 4
-hpat1 156601 156605 AT_2 4
-hpat1 156623 156627 TA_2 4
-hpat1 156642 156646 AT_2 4
-hpat1 156649 156653 TC_2 4
-hpat1 156669 156679 TG_5 10
-hpat1 156699 156703 CT_2 4
-hpat1 156719 156725 TA_3 6
-hpat1 156731 156737 TAT_2 6
-hpat1 156737 156741 CT_2 4
-hpat1 156741 156745 TT_2 4
-hpat1 156747 156753 TT_3 6
-hpat1 156755 156759 TT_2 4
-hpat1 156768 156774 TT_3 6
-hpat1 156775 156779 GA_2 4
-hpat1 156780 156784 AG_2 4
-hpat1 156784 156790 TC_3 6
-hpat1 156790 156794 TG_2 4
-hpat1 156794 156798 TC_2 4
-hpat1 156816 156820 GC_2 4
-hpat1 156822 156826 TC_2 4
-hpat1 156839 156843 CT_2 4
-hpat1 156863 156867 TC_2 4
-hpat1 156876 156882 CCT_2 6
-hpat1 156883 156889 AGC_2 6
-hpat1 156904 156913 CCA_3 9
-hpat1 156924 156930 TT_3 6
-hpat1 156934 156938 TT_2 4
-hpat1 156938 156944 TAG_2 6
-hpat1 156948 156952 GG_2 4
-hpat1 156958 156962 TG_2 4
-hpat1 156975 156979 TC_2 4
-hpat1 156981 156985 TC_2 4
-hpat1 156998 157006 CCAC_2 8
-hpat1 157042 157048 CCA_2 6
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-hpat1 165996 166000 TT_2 4
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-hpat1 166115 166121 ATG_2 6
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-hpat1 168214 168240 AC_13 26
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hpat1 168737 168767 GAAAA_6 30
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hpat1 228564 228576 ATAAAA_2 12
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-hpat1 229133 229137 GA_2 4
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-hpat1 229383 229387 AA_2 4
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-hpat1 230193 230197 TG_2 4
-hpat1 230197 230203 TT_3 6
-hpat1 230203 230215 GTTT_3 12
-hpat1 230218 230222 GA_2 4
-hpat1 230223 230227 AG_2 4
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-hpat1 230259 230263 GC_2 4
-hpat1 230265 230269 TC_2 4
-hpat1 230282 230286 CT_2 4
-hpat1 230288 230292 CT_2 4
-hpat1 230306 230310 TC_2 4
-hpat1 230320 230324 CT_2 4
-hpat1 230348 230354 CAC_2 6
-hpat1 230367 230371 TT_2 4
-hpat1 230375 230381 TT_3 6
-hpat1 230384 230390 TAG_2 6
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-hpat1 230547 230553 ATG_2 6
-hpat1 230553 230557 TG_2 4
-hpat1 230561 230591 TA_15 30
-hpat1 230591 230619 GA_14 28
-hpat1 230619 230625 AAT_2 6
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-hpat1 230829 230833 CC_2 4
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-hpat1 230869 230873 TC_2 4
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-hpat1 231103 231107 CA_2 4
-hpat1 231117 231121 TG_2 4
-hpat1 231121 231127 AAT_2 6
-hpat1 231151 231155 AT_2 4
-hpat1 231164 231170 TGA_2 6
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-hpat1 231186 231192 TA_3 6
-hpat1 231195 231199 AG_2 4
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-hpat1 231403 231409 AGG_2 6
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-hpat1 232104 232124 CA_10 20
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-hpat1 233157 233163 AA_3 6
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-hpat1 233304 233308 AA_2 4
-hpat1 233335 233343 TTAA_2 8
-hpat1 233347 233351 AA_2 4
-hpat1 233373 233379 CAG_2 6
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-hpat1 234110 234114 GA_2 4
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hpat1 234128 234140 GGAGGT_2 12
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-hpat1 234177 234181 GG_2 4
-hpat1 234185 234189 AG_2 4
-hpat1 234190 234194 GA_2 4
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-hpat1 234203 234215 AA_6 12
-hpat1 234219 234223 TT_2 4
-hpat1 234225 234229 TT_2 4
-hpat1 234230 234234 TT_2 4
-hpat1 234235 234239 AA_2 4
-hpat1 234241 234247 AA_3 6
-hpat1 234255 234259 GC_2 4
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-hpat1 234369 234373 AA_2 4
-hpat1 234377 234381 AA_2 4
-hpat1 234391 234397 AGT_2 6
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-hpat1 234424 234430 AGG_2 6
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-hpat1 234463 234467 AG_2 4
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-hpat1 234533 234545 AA_6 12
-hpat1 234548 234552 AA_2 4
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-hpat1 234634 234640 GCA_2 6
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-hpat1 234649 234655 AAT_2 6
-hpat1 234662 234666 TA_2 4
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-hpat1 234673 234677 AT_2 4
-hpat1 234677 234681 AA_2 4
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-hpat1 234706 234710 TT_2 4
-hpat1 234710 234714 AA_2 4
-hpat1 234721 234727 GAA_2 6
-hpat1 234735 234739 GT_2 4
-hpat1 234744 234750 ATT_2 6
-hpat1 234752 234758 TT_3 6
-hpat1 234768 234772 TA_2 4
-hpat1 234779 234783 TG_2 4
-hpat1 234784 234792 TCTT_2 8
-hpat1 234794 234800 TA_3 6
-hpat1 234804 234808 TA_2 4
-hpat1 234810 234814 TT_2 4
-hpat1 234814 234822 AATA_2 8
-hpat1 234836 234845 ACC_3 9
-hpat1 234854 234860 AC_3 6
-hpat1 234867 234873 TCA_2 6
-hpat1 234880 234884 AA_2 4
-hpat1 234899 234903 CC_2 4
-hpat1 234919 234929 CACCC_2 10
-hpat1 234954 234958 TT_2 4
-hpat1 234965 234969 TA_2 4
-hpat1 234970 234974 TT_2 4
-hpat1 234977 234981 TT_2 4
-hpat1 234988 234992 TG_2 4
-hpat1 235008 235014 GTA_2 6
-hpat1 235021 235025 TT_2 4
-hpat1 235025 235029 GA_2 4
-hpat1 235035 235041 TC_3 6
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hpat1 246700 246712 TCCTCA_2 12
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-hpat1 258367 258373 CCA_2 6
-hpat1 258381 258387 CCA_2 6
-hpat1 258389 258393 CT_2 4
-hpat1 258405 258411 TT_3 6
-hpat1 258429 258433 TG_2 4
-hpat1 258477 258481 TA_2 4
-hpat1 258503 258507 GG_2 4
-hpat1 258534 258538 CT_2 4
-hpat1 258546 258550 CT_2 4
-hpat1 258562 258566 CT_2 4
-hpat1 258569 258577 CTCA_2 8
-hpat1 258582 258586 GT_2 4
-hpat1 258596 258604 TTCC_2 8
-hpat1 258618 258622 CA_2 4
-hpat1 258637 258641 TG_2 4
-hpat1 258651 258655 AG_2 4
-hpat1 258680 258686 CTT_2 6
-hpat1 258710 258716 TGG_2 6
-hpat1 258718 258722 CA_2 4
-hpat1 258750 258758 AGGC_2 8
-hpat1 258781 258785 GA_2 4
-hpat1 258804 258808 AA_2 4
-hpat1 258808 258812 CC_2 4
-hpat1 258816 258822 CTA_2 6
-hpat1 258822 258826 AA_2 4
-hpat1 258830 258834 AA_2 4
-hpat1 258846 258852 TGG_2 6
-hpat1 258854 258858 CA_2 4
-hpat1 258885 258889 GA_2 4
-hpat1 258891 258895 AG_2 4
-hpat1 258909 258915 AGG_2 6
-hpat1 258933 258937 GA_2 4
-hpat1 258961 258965 GA_2 4
-hpat1 258966 258970 AG_2 4
-hpat1 258975 258979 CT_2 4
-hpat1 258980 258984 TC_2 4
-hpat1 258984 258993 AAG_3 9
-hpat1 258993 259001 GAAG_2 8
-hpat1 259002 259014 AAGG_3 12
-hpat1 259014 259046 GAGG_8 32
-hpat1 259047 259059 GAAA_3 12
-hpat1 259059 259067 GAAG_2 8
+hpat1 254794 254809 TTT_5 15
+hpat1 256151 256171 AGGG_5 20
+hpat1 256551 256587 ACAC_9 36
+hpat1 257214 257226 AAAAAA_2 12
+hpat1 257469 257489 TTTTG_4 20
+hpat1 258084 258099 TCTTT_3 15
+hpat1 259011 259047 AGGG_9 36
hpat1 259067 259079 AAAGAA_2 12
-hpat1 259081 259085 AA_2 4
-hpat1 259085 259089 GA_2 4
-hpat1 259094 259102 AG_4 8
-hpat1 259102 259114 AAAG_3 12
-hpat1 259114 259118 AA_2 4
-hpat1 259120 259124 AA_2 4
-hpat1 259124 259130 GA_3 6
-hpat1 259130 259138 AAGG_2 8
-hpat1 259141 259149 GAAG_2 8
-hpat1 259149 259161 GAAA_3 12
-hpat1 259161 259171 AGAAA_2 10
-hpat1 259192 259196 CC_2 4
-hpat1 259199 259203 GA_2 4
-hpat1 259223 259227 TT_2 4
-hpat1 259235 259239 TC_2 4
-hpat1 259242 259246 GT_2 4
-hpat1 259267 259271 GA_2 4
-hpat1 259273 259277 CT_2 4
-hpat1 259285 259289 GT_2 4
-hpat1 259300 259304 TT_2 4
-hpat1 259305 259311 AGG_2 6
-hpat1 259312 259316 AA_2 4
-hpat1 259334 259338 GT_2 4
-hpat1 259366 259370 GT_2 4
-hpat1 259382 259390 CT_4 8
-hpat1 259391 259395 CC_2 4
-hpat1 259407 259411 TT_2 4
-hpat1 259416 259420 GG_2 4
-hpat1 259425 259431 ACC_2 6
-hpat1 259441 259445 GT_2 4
-hpat1 259445 259451 GAG_2 6
-hpat1 259456 259460 GG_2 4
-hpat1 259460 259464 AC_2 4
-hpat1 259481 259489 TC_4 8
-hpat1 259489 259495 AGC_2 6
-hpat1 259516 259520 CT_2 4
-hpat1 259520 259524 TC_2 4
-hpat1 259526 259530 CC_2 4
-hpat1 259557 259563 CCA_2 6
-hpat1 259569 259575 GGT_2 6
-hpat1 259605 259609 AG_2 4
-hpat1 259613 259617 AC_2 4
-hpat1 259619 259623 TC_2 4
-hpat1 259624 259628 AA_2 4
-hpat1 259662 259666 CA_2 4
-hpat1 259675 259679 CC_2 4
-hpat1 259685 259689 TC_2 4
-hpat1 259695 259699 TG_2 4
-hpat1 259702 259706 AG_2 4
-hpat1 259726 259734 TATT_2 8
-hpat1 259738 259742 CC_2 4
-hpat1 259744 259748 GA_2 4
-hpat1 259754 259760 CAC_2 6
-hpat1 259772 259776 CT_2 4
-hpat1 259786 259790 CC_2 4
-hpat1 259796 259800 TC_2 4
-hpat1 259848 259852 CA_2 4
-hpat1 259860 259864 AA_2 4
-hpat1 259864 259872 CCTT_2 8
-hpat1 259902 259910 CTTT_2 8
-hpat1 259914 259924 TT_5 10
-hpat1 259928 259936 AA_4 8
-hpat1 259936 259944 TT_4 8
-hpat1 259953 259957 TC_2 4
-hpat1 259958 259962 CT_2 4
-hpat1 259986 259990 CA_2 4
-hpat1 259991 259995 TC_2 4
-hpat1 260032 260036 TC_2 4
-hpat1 260075 260081 CCA_2 6
-hpat1 260092 260096 TT_2 4
-hpat1 260100 260104 TT_2 4
-hpat1 260104 260110 TAG_2 6
-hpat1 260120 260126 TCA_2 6
-hpat1 260227 260231 AG_2 4
-hpat1 260235 260239 TT_2 4
-hpat1 260250 260260 TACTC_2 10
-hpat1 260260 260266 AGC_2 6
-hpat1 260272 260276 CT_2 4
-hpat1 260286 260290 CA_2 4
-hpat1 260296 260300 TG_2 4
-hpat1 260327 260331 CT_2 4
-hpat1 260362 260366 TC_2 4
-hpat1 260369 260373 CA_2 4
-hpat1 260388 260392 AG_2 4
-hpat1 260414 260418 TT_2 4
-hpat1 260419 260423 TT_2 4
-hpat1 260423 260427 GG_2 4
-hpat1 260429 260435 GG_3 6
-hpat1 260447 260453 AGA_2 6
-hpat1 260457 260463 GAA_2 6
-hpat1 260471 260481 AGGAG_2 10
-hpat1 260481 260489 AAGG_2 8
-hpat1 260489 260493 AA_2 4
-hpat1 260497 260503 AGG_2 6
-hpat1 260503 260509 GA_3 6
-hpat1 260514 260523 GAA_3 9
-hpat1 260549 260553 CT_2 4
-hpat1 260555 260561 CA_3 6
-hpat1 260567 260571 TG_2 4
-hpat1 260574 260580 TCA_2 6
-hpat1 260582 260586 GA_2 4
-hpat1 260595 260599 GG_2 4
-hpat1 260601 260605 CC_2 4
-hpat1 260605 260615 CAACC_2 10
-hpat1 260617 260621 AG_2 4
-hpat1 260627 260631 CC_2 4
-hpat1 260631 260639 AAGG_2 8
-hpat1 260660 260664 GG_2 4
-hpat1 260696 260702 TC_3 6
-hpat1 260707 260711 AG_2 4
-hpat1 260725 260731 TTC_2 6
-hpat1 260741 260747 ACC_2 6
-hpat1 260755 260759 CT_2 4
-hpat1 260768 260772 AA_2 4
-hpat1 260805 260809 AC_2 4
-hpat1 260837 260841 AG_2 4
-hpat1 260844 260848 AC_2 4
-hpat1 260856 260862 CTG_2 6
-hpat1 260890 260894 AG_2 4
-hpat1 260905 260909 CA_2 4
-hpat1 260913 260917 CC_2 4
-hpat1 260954 260958 CC_2 4
-hpat1 260958 260966 TCCC_2 8
-hpat1 260985 260989 CA_2 4
-hpat1 261001 261005 CC_2 4
-hpat1 261011 261017 AG_3 6
-hpat1 261030 261034 AG_2 4
-hpat1 261034 261038 TG_2 4
-hpat1 261047 261051 AG_2 4
-hpat1 261059 261063 AA_2 4
-hpat1 261067 261071 CA_2 4
-hpat1 261079 261083 TC_2 4
-hpat1 261102 261106 AT_2 4
-hpat1 261109 261113 CT_2 4
-hpat1 261114 261118 GG_2 4
-hpat1 261139 261143 CT_2 4
-hpat1 261171 261175 TC_2 4
-hpat1 261195 261199 GA_2 4
-hpat1 261206 261210 CA_2 4
-hpat1 261213 261217 GG_2 4
-hpat1 261223 261227 GA_2 4
-hpat1 261236 261240 CC_2 4
-hpat1 261250 261254 GA_2 4
-hpat1 261260 261264 AA_2 4
-hpat1 261269 261275 GAG_2 6
-hpat1 261286 261290 GG_2 4
-hpat1 261329 261335 AG_3 6
-hpat1 261342 261346 CC_2 4
-hpat1 261357 261365 GGCT_2 8
-hpat1 261380 261384 AT_2 4
-hpat1 261387 261393 GTG_2 6
-hpat1 261415 261419 GA_2 4
-hpat1 261422 261426 GA_2 4
-hpat1 261442 261446 GG_2 4
-hpat1 261461 261469 GAAT_2 8
-hpat1 261479 261483 AG_2 4
-hpat1 261498 261502 CA_2 4
-hpat1 261504 261508 AA_2 4
-hpat1 261516 261520 AG_2 4
-hpat1 261531 261535 AA_2 4
-hpat1 261542 261548 AAG_2 6
-hpat1 261570 261574 AC_2 4
-hpat1 261582 261588 GGT_2 6
-hpat1 261607 261611 GG_2 4
-hpat1 261622 261628 GGT_2 6
-hpat1 261764 261770 AGG_2 6
-hpat1 261777 261781 AC_2 4
-hpat1 261788 261792 AG_2 4
-hpat1 261793 261799 CCT_2 6
-hpat1 261801 261805 GC_2 4
-hpat1 261813 261817 GA_2 4
-hpat1 261832 261836 CA_2 4
-hpat1 261842 261846 GG_2 4
-hpat1 261874 261883 ACC_3 9
-hpat1 261900 261904 TC_2 4
-hpat1 261912 261920 TGCA_2 8
-hpat1 261942 261946 CA_2 4
-hpat1 261946 261952 TCT_2 6
-hpat1 261956 261960 GA_2 4
-hpat1 261962 261966 CT_2 4
-hpat1 261987 261991 TG_2 4
-hpat1 261994 262000 GAA_2 6
-hpat1 262009 262013 CC_2 4
-hpat1 262020 262024 CT_2 4
-hpat1 262030 262036 GCA_2 6
-hpat1 262045 262049 AG_2 4
-hpat1 262055 262059 GG_2 4
-hpat1 262078 262082 AG_2 4
-hpat1 262085 262089 GG_2 4
-hpat1 262090 262094 AG_2 4
-hpat1 262097 262101 GG_2 4
-hpat1 262102 262106 GG_2 4
-hpat1 262108 262112 GA_2 4
-hpat1 262119 262123 CC_2 4
-hpat1 262128 262134 CA_3 6
-hpat1 262152 262158 CCA_2 6
-hpat1 262170 262176 TT_3 6
-hpat1 262176 262188 TCT_4 12
-hpat1 262222 262226 GC_2 4
-hpat1 262227 262231 TC_2 4
-hpat1 262260 262266 CAG_2 6
-hpat1 262270 262274 GT_2 4
-hpat1 262277 262283 CCA_2 6
-hpat1 262294 262300 CA_3 6
-hpat1 262303 262309 TGG_2 6
-hpat1 262309 262313 GA_2 4
-hpat1 262313 262317 GG_2 4
-hpat1 262319 262323 GG_2 4
-hpat1 262325 262329 CC_2 4
-hpat1 262332 262338 CTG_2 6
-hpat1 262350 262356 CTG_2 6
-hpat1 262362 262366 GC_2 4
-hpat1 262369 262373 AG_2 4
-hpat1 262375 262379 GA_2 4
-hpat1 262435 262441 TCC_2 6
-hpat1 262445 262451 TCT_2 6
-hpat1 262466 262472 GCT_2 6
-hpat1 262472 262480 CTGC_2 8
-hpat1 262492 262496 GG_2 4
-hpat1 262497 262501 GG_2 4
-hpat1 262511 262517 CAG_2 6
-hpat1 262521 262527 AGG_2 6
-hpat1 262552 262556 CC_2 4
-hpat1 262556 262562 AGG_2 6
-hpat1 262565 262571 AGG_2 6
-hpat1 262576 262580 TC_2 4
-hpat1 262594 262598 GG_2 4
-hpat1 262616 262622 CA_3 6
-hpat1 262631 262637 GGT_2 6
-hpat1 262638 262642 AA_2 4
-hpat1 262649 262653 CT_2 4
-hpat1 262653 262657 AG_2 4
-hpat1 262659 262663 TT_2 4
-hpat1 262666 262670 CC_2 4
-hpat1 262675 262679 GA_2 4
-hpat1 262698 262702 AA_2 4
-hpat1 262736 262740 CC_2 4
-hpat1 262741 262745 CT_2 4
-hpat1 262759 262763 GT_2 4
-hpat1 262765 262769 CT_2 4
-hpat1 262783 262787 CT_2 4
-hpat1 262798 262802 TC_2 4
-hpat1 262805 262809 AG_2 4
-hpat1 262809 262815 AC_3 6
-hpat1 262825 262829 GA_2 4
-hpat1 262839 262843 GG_2 4
-hpat1 262860 262864 AC_2 4
-hpat1 262901 262907 TCC_2 6
-hpat1 262907 262915 AG_4 8
-hpat1 262917 262921 CC_2 4
-hpat1 262928 262932 GG_2 4
-hpat1 262941 262947 CCA_2 6
-hpat1 262947 262951 CC_2 4
-hpat1 262957 262963 CAG_2 6
-hpat1 262963 262969 GT_3 6
-hpat1 262982 262986 AA_2 4
-hpat1 262991 262995 CA_2 4
-hpat1 262998 263006 CAGG_2 8
-hpat1 263017 263021 GA_2 4
-hpat1 263071 263075 AG_2 4
-hpat1 263083 263093 GGATT_2 10
-hpat1 263105 263111 TA_3 6
-hpat1 263117 263121 CA_2 4
-hpat1 263132 263138 CT_3 6
-hpat1 263160 263164 AA_2 4
-hpat1 263166 263172 GGA_2 6
-hpat1 263189 263195 AGT_2 6
-hpat1 263207 263213 GT_3 6
-hpat1 263237 263241 AG_2 4
-hpat1 263251 263255 GG_2 4
-hpat1 263262 263266 AG_2 4
-hpat1 263270 263274 GT_2 4
-hpat1 263293 263297 CT_2 4
-hpat1 263320 263326 AAG_2 6
-hpat1 263326 263330 AG_2 4
-hpat1 263335 263339 GG_2 4
-hpat1 263374 263378 CT_2 4
-hpat1 263378 263384 GCT_2 6
-hpat1 263389 263393 CC_2 4
-hpat1 263402 263408 GG_3 6
-hpat1 263452 263458 TTC_2 6
-hpat1 263458 263462 TT_2 4
-hpat1 263491 263497 TGC_2 6
-hpat1 263500 263504 CT_2 4
-hpat1 263529 263535 GAT_2 6
-hpat1 263546 263550 GG_2 4
-hpat1 263565 263569 CA_2 4
-hpat1 263571 263575 CT_2 4
-hpat1 263580 263584 CT_2 4
-hpat1 263585 263589 AG_2 4
-hpat1 263610 263614 AG_2 4
-hpat1 263618 263622 CC_2 4
-hpat1 263652 263656 AG_2 4
-hpat1 263675 263679 GT_2 4
-hpat1 263690 263696 GTT_2 6
-hpat1 263704 263710 TA_3 6
-hpat1 263734 263738 AC_2 4
-hpat1 263740 263744 AG_2 4
-hpat1 263744 263748 GT_2 4
-hpat1 263761 263767 TGG_2 6
-hpat1 263768 263774 AGC_2 6
-hpat1 263777 263781 CT_2 4
-hpat1 263798 263802 TG_2 4
-hpat1 263811 263815 CC_2 4
-hpat1 263815 263819 CT_2 4
-hpat1 263845 263849 CA_2 4
-hpat1 263855 263859 GG_2 4
-hpat1 263873 263877 AA_2 4
-hpat1 263878 263882 TC_2 4
-hpat1 263888 263896 AGTG_2 8
-hpat1 263899 263905 GC_3 6
-hpat1 263919 263923 TC_2 4
-hpat1 263927 263931 CT_2 4
-hpat1 263947 263951 GG_2 4
-hpat1 263961 263967 GAA_2 6
-hpat1 263982 263988 GGA_2 6
-hpat1 263990 263996 CAC_2 6
-hpat1 264007 264011 GG_2 4
-hpat1 264019 264023 GA_2 4
-hpat1 264025 264031 GC_3 6
-hpat1 264033 264037 TG_2 4
-hpat1 264037 264041 CG_2 4
-hpat1 264041 264049 GAGG_2 8
-hpat1 264056 264068 GGAG_3 12
-hpat1 264071 264083 GGGA_3 12
-hpat1 264084 264092 GGAG_2 8
-hpat1 264104 264116 GGAG_3 12
-hpat1 264119 264127 GGGA_2 8
-hpat1 264139 264145 CGG_2 6
-hpat1 264164 264172 GGAG_2 8
+hpat1 259110 259122 AAAGAA_2 12
+hpat1 259154 259169 AAAGA_3 15
+hpat1 262097 262109 GGGGTG_2 12
+hpat1 262175 262187 TTCTTC_2 12
+hpat1 262312 262324 AGGGGC_2 12
hpat1 264200 264224 GGAG_6 24
-hpat1 264228 264236 GGAG_2 8
-hpat1 264248 264260 GGAG_3 12
-hpat1 264263 264271 GGGA_2 8
-hpat1 264283 264289 CGG_2 6
-hpat1 264308 264316 GGAG_2 8
hpat1 264324 264348 GGAG_6 24
-hpat1 264352 264360 GGAG_2 8
-hpat1 264372 264384 GGAG_3 12
-hpat1 264387 264395 GGGA_2 8
-hpat1 264407 264413 CGG_2 6
-hpat1 264432 264440 GGAG_2 8
hpat1 264476 264496 GGAG_5 20
hpat1 264512 264536 GGAG_6 24
hpat1 264544 264564 GGAG_5 20
-hpat1 264580 264592 GGAG_3 12
-hpat1 264595 264607 GGAG_3 12
-hpat1 264615 264627 GGAG_3 12
-hpat1 264642 264658 GGGA_4 16
-hpat1 264659 264675 GGAG_4 16
-hpat1 264699 264715 GGAG_4 16
-hpat1 264742 264750 GGGC_2 8
-hpat1 264756 264760 CG_2 4
-hpat1 264762 264766 TC_2 4
-hpat1 264775 264779 GT_2 4
-hpat1 264780 264789 CTG_3 9
-hpat1 264789 264795 CAG_2 6
-hpat1 264821 264825 TC_2 4
-hpat1 264827 264831 TC_2 4
-hpat1 264839 264843 TC_2 4
-hpat1 264875 264879 TC_2 4
-hpat1 264891 264895 CT_2 4
-hpat1 264898 264902 AG_2 4
-hpat1 264929 264937 GCGG_2 8
-hpat1 264942 264946 AG_2 4
-hpat1 264947 264953 AG_3 6
-hpat1 264953 264959 GCG_2 6
-hpat1 264961 264965 GC_2 4
-hpat1 264980 264984 CC_2 4
-hpat1 264999 265005 CCG_2 6
-hpat1 265005 265009 CC_2 4
-hpat1 265011 265015 CC_2 4
-hpat1 265021 265029 CGCC_2 8
-hpat1 265038 265044 CCT_2 6
-hpat1 265053 265057 CG_2 4
-hpat1 265074 265078 CC_2 4
-hpat1 265085 265089 GC_2 4
-hpat1 265107 265111 CT_2 4
-hpat1 265130 265134 GT_2 4
-hpat1 265137 265143 CAT_2 6
-hpat1 265145 265149 CA_2 4
-hpat1 265176 265182 TGG_2 6
-hpat1 265183 265187 GT_2 4
-hpat1 265198 265204 CAA_2 6
-hpat1 265204 265210 AT_3 6
-hpat1 265220 265228 TAAA_2 8
-hpat1 265230 265234 TG_2 4
-hpat1 265239 265243 AT_2 4
-hpat1 265251 265255 TC_2 4
-hpat1 265267 265271 AT_2 4
-hpat1 265274 265280 AAT_2 6
-hpat1 265289 265297 CGGG_2 8
-hpat1 265309 265313 TA_2 4
-hpat1 265357 265361 AG_2 4
-hpat1 265364 265368 GA_2 4
-hpat1 265391 265395 CC_2 4
-hpat1 265396 265400 TC_2 4
-hpat1 265404 265408 AA_2 4
-hpat1 265412 265416 AA_2 4
-hpat1 265427 265433 GTG_2 6
-hpat1 265433 265437 GC_2 4
-hpat1 265458 265462 GG_2 4
-hpat1 265514 265518 GA_2 4
-hpat1 265520 265524 GC_2 4
-hpat1 265529 265533 CT_2 4
-hpat1 265547 265551 AG_2 4
+hpat1 265004 265016 GCCCCG_2 12
hpat1 265566 265584 AAT_6 18
-hpat1 265589 265593 CC_2 4
-hpat1 265593 265601 AGGT_2 8
-hpat1 265602 265608 AAG_2 6
-hpat1 265613 265617 AG_2 4
-hpat1 265631 265637 GGA_2 6
-hpat1 265643 265647 GG_2 4
-hpat1 265651 265655 AA_2 4
-hpat1 265657 265663 GAT_2 6
-hpat1 265687 265691 CG_2 4
-hpat1 265704 265708 CT_2 4
-hpat1 265713 265719 CA_3 6
-hpat1 265723 265727 CC_2 4
-hpat1 265737 265743 AGG_2 6
-hpat1 265773 265777 AC_2 4
-hpat1 265778 265784 CAG_2 6
-hpat1 265790 265794 AA_2 4
hpat1 265802 265817 AAC_5 15
-hpat1 265826 265830 CC_2 4
-hpat1 265837 265841 AC_2 4
-hpat1 265842 265848 CAG_2 6
-hpat1 265854 265858 AA_2 4
hpat1 265865 265877 TAACAA_2 12
-hpat1 265877 265883 CAA_2 6
-hpat1 265890 265894 CC_2 4
-hpat1 265901 265905 AC_2 4
-hpat1 265906 265912 CAG_2 6
-hpat1 265918 265922 AA_2 4
hpat1 265930 265945 AAC_5 15
-hpat1 265954 265958 CC_2 4
-hpat1 265965 265969 AC_2 4
-hpat1 265970 265976 CAG_2 6
-hpat1 265982 265986 AA_2 4
hpat1 265993 266005 TAACAA_2 12
-hpat1 266005 266011 CAA_2 6
-hpat1 266023 266027 CT_2 4
-hpat1 266031 266041 GCCAG_2 10
-hpat1 266045 266049 TG_2 4
-hpat1 266054 266058 CT_2 4
-hpat1 266066 266070 CA_2 4
-hpat1 266109 266113 CT_2 4
-hpat1 266114 266118 TT_2 4
-hpat1 266136 266142 AG_3 6
-hpat1 266158 266162 GT_2 4
-hpat1 266162 266168 CA_3 6
-hpat1 266171 266177 AAG_2 6
hpat1 266185 266197 CTGGAA_2 12
-hpat1 266218 266226 TGTC_2 8
-hpat1 266239 266243 AA_2 4
-hpat1 266261 266265 AA_2 4
-hpat1 266318 266324 AC_3 6
-hpat1 266360 266364 AG_2 4
-hpat1 266374 266382 AGTT_2 8
-hpat1 266386 266390 TC_2 4
-hpat1 266390 266394 AG_2 4
-hpat1 266394 266400 CCT_2 6
-hpat1 266400 266404 TA_2 4
-hpat1 266435 266439 TT_2 4
-hpat1 266439 266443 AG_2 4
-hpat1 266452 266456 AA_2 4
-hpat1 266456 266460 TA_2 4
-hpat1 266463 266467 GA_2 4
-hpat1 266502 266506 AC_2 4
-hpat1 266523 266529 GGA_2 6
-hpat1 266572 266576 GA_2 4
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hpat1 266758 266778 TAAA_5 20
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-hpat1 267248 267252 AG_2 4
-hpat1 267260 267266 TAT_2 6
-hpat1 267277 267281 TA_2 4
-hpat1 267289 267295 CAG_2 6
-hpat1 267300 267304 CA_2 4
-hpat1 267310 267314 CA_2 4
-hpat1 267336 267340 AG_2 4
-hpat1 267352 267358 ACT_2 6
-hpat1 267372 267376 AG_2 4
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-hpat1 267748 267754 CAG_2 6
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hpat1 268394 268406 GGAGGT_2 12
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hpat1 269911 269923 ATGGAC_2 12
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hpat1 271170 271182 GATTTA_2 12
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hpat1 271561 271573 TGAAAA_2 12
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-hpat1 272180 272192 GGAAAA_2 12
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hpat1 274214 274226 GAGCCT_2 12
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hpat1 292686 292698 TCTTTC_2 12
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hpat1 297141 297162 ATT_7 21
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-hpat1 313334 313338 CT_2 4
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-hpat1 313367 313373 GGA_2 6
-hpat1 313384 313392 GGTT_2 8
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-hpat1 313436 313440 GG_2 4
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-hpat1 313446 313450 AC_2 4
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-hpat1 313457 313463 CAC_2 6
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-hpat1 313472 313476 CG_2 4
-hpat1 313483 313487 CT_2 4
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-hpat1 313512 313518 CC_3 6
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-hpat1 313556 313562 CAG_2 6
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hpat1 314010 314022 CCCTGT_2 12
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hpat1 314054 314069 GCCCC_3 15
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-hpat1 315878 315886 GACA_2 8
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-hpat1 316921 316927 CTT_2 6
-hpat1 316933 316939 CAG_2 6
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-hpat1 321445 321451 TAG_2 6
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-hpat1 321708 321712 GG_2 4
-hpat1 321731 321735 TC_2 4
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-hpat1 338155 338161 GAG_2 6
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-hpat1 338180 338186 AG_3 6
-hpat1 338202 338212 TCAGG_2 10
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-hpat1 338229 338233 GA_2 4
-hpat1 338268 338274 GT_3 6
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-hpat1 338282 338286 TT_2 4
-hpat1 338292 338298 TCT_2 6
-hpat1 338311 338315 TG_2 4
-hpat1 338320 338324 CT_2 4
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-hpat1 338368 338372 CT_2 4
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-hpat1 338383 338391 TTTA_2 8
-hpat1 338421 338425 CT_2 4
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-hpat1 338473 338477 CA_2 4
-hpat1 338482 338486 CT_2 4
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-hpat1 338552 338556 GT_2 4
-hpat1 338557 338561 CA_2 4
-hpat1 338568 338572 GT_2 4
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-hpat1 338612 338616 AG_2 4
-hpat1 338631 338635 GG_2 4
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-hpat1 338645 338651 GAG_2 6
-hpat1 338659 338669 TGAGA_2 10
-hpat1 338697 338701 AG_2 4
-hpat1 338722 338726 AG_2 4
-hpat1 338746 338750 AC_2 4
-hpat1 338761 338765 GA_2 4
-hpat1 338788 338796 GGAA_2 8
-hpat1 338800 338804 AG_2 4
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-hpat1 338855 338859 CC_2 4
-hpat1 338864 338870 GT_3 6
-hpat1 338872 338876 TG_2 4
-hpat1 338883 338887 TC_2 4
-hpat1 338891 338899 GGAT_2 8
-hpat1 338902 338906 GG_2 4
-hpat1 338949 338953 GG_2 4
-hpat1 338953 338957 CC_2 4
-hpat1 338980 338988 GTCT_2 8
-hpat1 338991 338995 TC_2 4
-hpat1 339014 339018 GG_2 4
-hpat1 339027 339036 CTG_3 9
-hpat1 339037 339041 GT_2 4
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hpat1 339090 339102 GGTGAG_2 12
-hpat1 339108 339112 GT_2 4
-hpat1 339161 339169 GGCA_2 8
-hpat1 339174 339178 CT_2 4
-hpat1 339178 339182 GT_2 4
-hpat1 339210 339214 CT_2 4
-hpat1 339228 339236 GGCT_2 8
-hpat1 339244 339248 AC_2 4
-hpat1 339254 339258 AG_2 4
-hpat1 339266 339270 CC_2 4
-hpat1 339297 339301 GG_2 4
-hpat1 339308 339312 AG_2 4
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-hpat1 339645 339649 CA_2 4
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-hpat1 339760 339766 CT_3 6
-hpat1 339791 339795 CT_2 4
-hpat1 339795 339799 TC_2 4
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-hpat1 339831 339835 AC_2 4
-hpat1 339842 339846 GG_2 4
-hpat1 339847 339851 GG_2 4
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-hpat1 339968 339976 CCCA_2 8
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-hpat1 340004 340014 AGGTG_2 10
-hpat1 340017 340023 GAA_2 6
-hpat1 340047 340053 CA_3 6
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-hpat1 340278 340282 GG_2 4
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-hpat1 340318 340326 ACCT_2 8
-hpat1 340360 340366 ATA_2 6
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-hpat1 340379 340383 AG_2 4
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-hpat1 340390 340394 CC_2 4
-hpat1 340394 340402 TCCC_2 8
-hpat1 340417 340423 TC_3 6
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-hpat1 340443 340447 CT_2 4
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-hpat1 340464 340468 GC_2 4
-hpat1 340474 340478 CT_2 4
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-hpat1 340485 340489 CC_2 4
-hpat1 340509 340513 TC_2 4
-hpat1 340528 340534 CCT_2 6
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-hpat1 340546 340552 GGC_2 6
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-hpat1 340590 340594 CC_2 4
-hpat1 340594 340600 CTC_2 6
-hpat1 340608 340612 CC_2 4
-hpat1 340645 340653 GGAT_2 8
-hpat1 340670 340674 TC_2 4
-hpat1 340684 340688 GG_2 4
-hpat1 340691 340695 GG_2 4
-hpat1 340697 340701 GA_2 4
-hpat1 340704 340708 AC_2 4
-hpat1 340726 340732 TG_3 6
-hpat1 340745 340751 ATT_2 6
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-hpat1 340779 340783 GA_2 4
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-hpat1 340795 340801 TCT_2 6
-hpat1 340801 340813 TT_6 12
-hpat1 340818 340824 TGT_2 6
-hpat1 340828 340832 CT_2 4
-hpat1 340854 340858 GG_2 4
-hpat1 340878 340882 CT_2 4
-hpat1 340883 340889 CCT_2 6
-hpat1 340902 340906 TC_2 4
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-hpat1 341039 341047 GCCT_2 8
-hpat1 341107 341111 TT_2 4
-hpat1 341125 341131 TGA_2 6
-hpat1 341133 341139 AG_3 6
-hpat1 341139 341147 GTGA_2 8
-hpat1 341151 341157 TT_3 6
-hpat1 341157 341169 ATTTTT_2 12
-hpat1 341174 341180 TT_3 6
-hpat1 341181 341187 TT_3 6
-hpat1 341189 341193 GA_2 4
-hpat1 341203 341207 CT_2 4
-hpat1 341235 341245 AGCTC_2 10
-hpat1 341277 341281 TC_2 4
-hpat1 341331 341339 TGCC_2 8
-hpat1 341340 341346 AC_3 6
-hpat1 341354 341360 TT_3 6
-hpat1 341363 341367 TT_2 4
-hpat1 341367 341373 TAG_2 6
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-hpat1 341411 341415 TC_2 4
-hpat1 341428 341436 CCGC_2 8
-hpat1 341476 341480 CG_2 4
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-hpat1 341519 341523 GG_2 4
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-hpat1 341596 341600 GT_2 4
-hpat1 341620 341626 TT_3 6
-hpat1 341635 341639 CC_2 4
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-hpat1 341704 341714 TAGCT_2 10
-hpat1 341720 341726 TA_3 6
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-hpat1 341900 341908 GGTG_2 8
-hpat1 341953 341957 AA_2 4
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-hpat1 341964 341970 ACT_2 6
-hpat1 341970 341974 AA_2 4
-hpat1 341978 341982 AA_2 4
-hpat1 341994 342000 TGG_2 6
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-hpat1 342123 342127 CT_2 4
-hpat1 342128 342132 TC_2 4
-hpat1 342132 342148 AA_8 16
-hpat1 342178 342182 GT_2 4
-hpat1 342196 342204 TGGG_2 8
-hpat1 342207 342211 GA_2 4
-hpat1 342213 342217 TC_2 4
-hpat1 342226 342230 GA_2 4
-hpat1 342230 342236 AC_3 6
-hpat1 342239 342243 CT_2 4
-hpat1 342257 342261 TG_2 4
-hpat1 342270 342274 GT_2 4
-hpat1 342276 342280 GA_2 4
-hpat1 342280 342284 GG_2 4
-hpat1 342305 342309 TT_2 4
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-hpat1 342534 342540 ACC_2 6
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-hpat1 342565 342571 TGC_2 6
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-hpat1 342636 342640 CA_2 4
-hpat1 342646 342656 ATCCA_2 10
-hpat1 342669 342679 TCAAC_2 10
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-hpat1 342841 342845 CC_2 4
-hpat1 342854 342860 TAC_2 6
-hpat1 342868 342876 CAGA_2 8
-hpat1 342904 342913 TCC_3 9
-hpat1 342946 342950 AG_2 4
-hpat1 342955 342959 AA_2 4
-hpat1 342959 342967 CCCT_2 8
-hpat1 342984 342988 AC_2 4
-hpat1 343006 343012 CC_3 6
-hpat1 343020 343024 CT_2 4
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-hpat1 343037 343043 CCA_2 6
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-hpat1 343066 343074 CCAG_2 8
-hpat1 343107 343111 CT_2 4
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-hpat1 343120 343126 CTC_2 6
-hpat1 343133 343139 GAC_2 6
-hpat1 343177 343181 TC_2 4
-hpat1 343197 343203 AGC_2 6
-hpat1 343218 343228 CCAGG_2 10
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-hpat1 343301 343305 GA_2 4
-hpat1 343322 343326 GA_2 4
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-hpat1 343333 343337 TC_2 4
-hpat1 343341 343345 AA_2 4
-hpat1 343349 343353 AA_2 4
-hpat1 343364 343370 TGG_2 6
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hpat1 343752 343764 GGAGGT_2 12
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-hpat1 344322 344328 GG_3 6
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-hpat1 344370 344384 TT_7 14
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hpat1 344598 344610 GGCCTC_2 12
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-hpat1 345390 345396 GGA_2 6
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-hpat1 345485 345491 AA_3 6
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-hpat1 345629 345633 AA_2 4
-hpat1 345644 345650 GTG_2 6
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-hpat1 345732 345736 GA_2 4
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-hpat1 346102 346108 AAG_2 6
-hpat1 346117 346121 GG_2 4
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-hpat1 346196 346206 TT_5 10
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-hpat1 346223 346227 CT_2 4
-hpat1 346250 346254 GC_2 4
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-hpat1 346297 346301 TC_2 4
-hpat1 346338 346342 GC_2 4
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-hpat1 346517 346521 GG_2 4
-hpat1 346532 346536 GG_2 4
-hpat1 346543 346551 GA_4 8
-hpat1 346553 346559 CTG_2 6
-hpat1 346571 346579 AGGC_2 8
-hpat1 346605 346609 CC_2 4
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-hpat1 346622 346626 CA_2 4
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-hpat1 372046 372050 GT_2 4
-hpat1 372054 372062 TGAA_2 8
-hpat1 372069 372073 AT_2 4
-hpat1 372073 372077 CT_2 4
-hpat1 372081 372085 TG_2 4
-hpat1 372092 372096 GA_2 4
-hpat1 372108 372112 GA_2 4
-hpat1 372120 372124 TT_2 4
-hpat1 372130 372134 TA_2 4
-hpat1 372135 372139 TT_2 4
-hpat1 372150 372154 TG_2 4
-hpat1 372154 372158 TT_2 4
-hpat1 372166 372174 TATT_2 8
-hpat1 372199 372203 AA_2 4
-hpat1 372206 372212 TT_3 6
-hpat1 372213 372217 GA_2 4
-hpat1 372218 372222 AG_2 4
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-hpat1 372246 372250 GT_2 4
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-hpat1 372277 372281 CT_2 4
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-hpat1 372301 372305 TC_2 4
-hpat1 372343 372352 CAC_3 9
-hpat1 372362 372372 TT_5 10
-hpat1 372415 372421 GTG_2 6
-hpat1 372424 372428 TC_2 4
+hpat1 371202 371217 TTT_5 15
+hpat1 371648 371663 TTT_5 15
hpat1 372439 372451 ACCTCC_2 12
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-hpat1 372509 372515 CCA_2 6
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-hpat1 372534 372538 TT_2 4
-hpat1 372538 372544 TAG_2 6
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-hpat1 372620 372626 TGC_2 6
-hpat1 372659 372665 TGC_2 6
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-hpat1 373003 373011 AA_4 8
-hpat1 373021 373027 CAT_2 6
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-hpat1 373068 373074 GAA_2 6
-hpat1 373119 373123 AG_2 4
-hpat1 373123 373127 TC_2 4
-hpat1 373137 373141 TG_2 4
-hpat1 373150 373160 AG_5 10
-hpat1 373162 373170 GATA_2 8
-hpat1 373172 373180 CAAA_2 8
-hpat1 373180 373188 TACA_2 8
-hpat1 373188 373196 TA_4 8
-hpat1 373198 373202 AT_2 4
-hpat1 373203 373211 TA_4 8
-hpat1 373214 373218 TT_2 4
-hpat1 373224 373228 AA_2 4
-hpat1 373229 373233 TA_2 4
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-hpat1 373242 373248 GGT_2 6
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-hpat1 373341 373355 AA_7 14
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-hpat1 373439 373445 TA_3 6
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-hpat1 373501 373507 ATG_2 6
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-hpat1 373733 373739 CAG_2 6
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hpat1 373850 373862 GTTGGA_2 12
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-hpat1 374117 374123 CAC_2 6
-hpat1 374123 374129 AGG_2 6
-hpat1 374136 374142 AGG_2 6
-hpat1 374165 374169 AG_2 4
-hpat1 374180 374188 TTCA_2 8
-hpat1 374192 374196 TG_2 4
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-hpat1 374243 374249 AG_3 6
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-hpat1 374260 374266 GTC_2 6
-hpat1 374274 374278 GG_2 4
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-hpat1 374301 374305 GT_2 4
-hpat1 374311 374317 TGC_2 6
-hpat1 374318 374322 GG_2 4
-hpat1 374341 374345 GC_2 4
-hpat1 374347 374351 AA_2 4
-hpat1 374382 374386 GA_2 4
-hpat1 374394 374402 GCAG_2 8
-hpat1 374402 374406 GG_2 4
-hpat1 374427 374431 AA_2 4
-hpat1 374435 374439 GG_2 4
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-hpat1 374457 374461 AA_2 4
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-hpat1 374470 374474 TG_2 4
-hpat1 374477 374481 AG_2 4
-hpat1 374483 374487 GA_2 4
-hpat1 374490 374494 TG_2 4
-hpat1 374500 374504 GG_2 4
-hpat1 374507 374511 GA_2 4
-hpat1 374520 374526 GCA_2 6
-hpat1 374539 374543 GT_2 4
-hpat1 374549 374553 GG_2 4
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-hpat1 374621 374625 AA_2 4
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-hpat1 374685 374689 GA_2 4
-hpat1 374698 374702 GA_2 4
-hpat1 374719 374723 CA_2 4
-hpat1 374743 374747 GG_2 4
-hpat1 374755 374759 GG_2 4
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-hpat1 374835 374839 AC_2 4
-hpat1 374855 374861 AAG_2 6
-hpat1 374863 374867 AG_2 4
-hpat1 374869 374873 GA_2 4
-hpat1 374875 374879 AA_2 4
-hpat1 374880 374884 GT_2 4
-hpat1 374900 374904 TG_2 4
-hpat1 374915 374921 ATG_2 6
-hpat1 374929 374933 GT_2 4
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-hpat1 374943 374947 TT_2 4
-hpat1 374954 374958 AC_2 4
-hpat1 374967 374973 GGT_2 6
-hpat1 374982 374986 TG_2 4
-hpat1 374986 374990 CC_2 4
-hpat1 374990 374994 TT_2 4
-hpat1 374994 375002 ATAG_2 8
-hpat1 375005 375009 AC_2 4
-hpat1 375010 375014 GA_2 4
-hpat1 375037 375041 CA_2 4
-hpat1 375045 375049 AG_2 4
-hpat1 375052 375058 GGT_2 6
-hpat1 375061 375065 AG_2 4
-hpat1 375079 375085 AGG_2 6
-hpat1 375093 375099 AG_3 6
-hpat1 375102 375106 TG_2 4
-hpat1 375127 375133 CA_3 6
-hpat1 375151 375159 GGCA_2 8
-hpat1 375175 375179 GG_2 4
-hpat1 375196 375200 GA_2 4
-hpat1 375205 375209 GG_2 4
-hpat1 375229 375233 CA_2 4
-hpat1 375233 375237 GA_2 4
-hpat1 375253 375262 CCT_3 9
-hpat1 375262 375266 GG_2 4
-hpat1 375266 375275 CAG_3 9
-hpat1 375282 375286 CT_2 4
-hpat1 375292 375296 AG_2 4
-hpat1 375310 375314 GG_2 4
-hpat1 375334 375338 CC_2 4
-hpat1 375352 375356 CT_2 4
-hpat1 375356 375360 TG_2 4
-hpat1 375360 375364 CA_2 4
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-hpat1 375405 375409 CT_2 4
-hpat1 375413 375417 CC_2 4
-hpat1 375422 375428 GCA_2 6
-hpat1 375429 375433 CA_2 4
-hpat1 375435 375439 CT_2 4
-hpat1 375453 375457 GG_2 4
-hpat1 375473 375477 AG_2 4
-hpat1 375498 375504 GA_3 6
-hpat1 375505 375509 GC_2 4
-hpat1 375517 375521 CA_2 4
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-hpat1 375549 375553 AA_2 4
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-hpat1 375613 375617 CA_2 4
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-hpat1 375638 375644 GT_3 6
-hpat1 375653 375657 AA_2 4
-hpat1 375657 375661 TT_2 4
-hpat1 375695 375699 AC_2 4
-hpat1 375736 375740 TG_2 4
-hpat1 375743 375749 AA_3 6
-hpat1 375753 375763 GTTCT_2 10
-hpat1 375785 375789 GA_2 4
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-hpat1 375815 375819 AA_2 4
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-hpat1 375911 375915 GA_2 4
-hpat1 375951 375955 AA_2 4
-hpat1 375959 375965 AA_3 6
-hpat1 375976 375982 TGG_2 6
-hpat1 375984 375988 GG_2 4
-hpat1 376007 376011 GA_2 4
-hpat1 376022 376026 GA_2 4
-hpat1 376027 376031 TC_2 4
hpat1 376040 376052 GGAGGT_2 12
-hpat1 376063 376067 GA_2 4
-hpat1 376068 376072 CA_2 4
-hpat1 376092 376098 CAA_2 6
-hpat1 376102 376106 AA_2 4
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-hpat1 376115 376121 AA_3 6
-hpat1 376123 376129 AA_3 6
-hpat1 376137 376141 AA_2 4
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-hpat1 376195 376199 AT_2 4
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-hpat1 376327 376335 GTGG_2 8
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-hpat1 376360 376366 TGA_2 6
-hpat1 376383 376389 CAT_2 6
-hpat1 376403 376409 TCC_2 6
-hpat1 376414 376418 TG_2 4
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-hpat1 376448 376452 TT_2 4
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-hpat1 376502 376506 AA_2 4
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-hpat1 376560 376566 GGA_2 6
-hpat1 376586 376590 GA_2 4
-hpat1 376604 376610 ATG_2 6
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-hpat1 376634 376638 AA_2 4
-hpat1 376656 376660 CA_2 4
-hpat1 376677 376681 AC_2 4
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-hpat1 376696 376700 GA_2 4
-hpat1 376713 376719 AGG_2 6
-hpat1 376737 376741 GA_2 4
-hpat1 376743 376747 GC_2 4
-hpat1 376749 376753 GT_2 4
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-hpat1 376775 376779 GA_2 4
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-hpat1 376861 376869 GCTG_2 8
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-hpat1 377005 377009 TG_2 4
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-hpat1 377118 377124 CG_3 6
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-hpat1 377164 377172 CTGG_2 8
-hpat1 377179 377185 CTC_2 6
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-hpat1 377218 377222 CA_2 4
-hpat1 377234 377240 GCC_2 6
hpat1 377248 377260 CCTGAG_2 12
-hpat1 377269 377273 CT_2 4
-hpat1 377296 377300 GC_2 4
-hpat1 377331 377335 TC_2 4
-hpat1 377339 377343 TG_2 4
-hpat1 377365 377369 GA_2 4
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-hpat1 377514 377518 GA_2 4
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-hpat1 377794 377798 AG_2 4
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-hpat1 378113 378117 GA_2 4
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-hpat1 378126 378134 CTGG_2 8
-hpat1 378161 378165 GT_2 4
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-hpat1 378180 378184 TC_2 4
-hpat1 378195 378199 AA_2 4
-hpat1 378215 378219 GT_2 4
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-hpat1 378243 378247 AA_2 4
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-hpat1 378348 378360 TT_6 12
-hpat1 378365 378369 GA_2 4
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-hpat1 378972 378980 GATT_2 8
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-hpat1 379124 379128 AC_2 4
-hpat1 379128 379140 TT_6 12
-hpat1 379140 379144 GA_2 4
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-hpat1 379178 379184 GTG_2 6
-hpat1 379188 379192 CA_2 4
-hpat1 379227 379233 TCC_2 6
-hpat1 379241 379247 CCT_2 6
-hpat1 379248 379254 AGT_2 6
-hpat1 379265 379271 GT_3 6
-hpat1 379272 379282 CCACC_2 10
-hpat1 379291 379295 GA_2 4
-hpat1 379296 379300 GG_2 4
-hpat1 379323 379327 TC_2 4
-hpat1 379348 379356 CTGC_2 8
-hpat1 379367 379371 AA_2 4
-hpat1 379380 379384 TA_2 4
-hpat1 379415 379419 GA_2 4
-hpat1 379420 379424 TT_2 4
-hpat1 379426 379430 AG_2 4
-hpat1 379467 379475 TTGA_2 8
-hpat1 379477 379481 TT_2 4
-hpat1 379483 379487 CA_2 4
-hpat1 379506 379510 TT_2 4
-hpat1 379517 379523 AAC_2 6
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-hpat1 379702 379706 AT_2 4
-hpat1 379710 379714 TT_2 4
-hpat1 379735 379739 TT_2 4
-hpat1 379739 379745 AGC_2 6
-hpat1 379745 379753 CATC_2 8
-hpat1 379758 379762 TA_2 4
-hpat1 379766 379772 TTA_2 6
-hpat1 379773 379777 TG_2 4
-hpat1 379795 379799 TT_2 4
-hpat1 379799 379811 CTTTTT_2 12
-hpat1 379811 379823 TTTC_3 12
-hpat1 379823 379839 TT_8 16
-hpat1 379839 379843 GA_2 4
-hpat1 379844 379848 AG_2 4
-hpat1 379848 379852 TC_2 4
-hpat1 379853 379857 CT_2 4
-hpat1 379886 379890 TC_2 4
+hpat1 377812 377824 AAAAAA_2 12
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+hpat1 379128 379140 TTTTTT_2 12
+hpat1 379795 379807 TTTTCT_2 12
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hpat1 379901 379913 ACCTCC_2 12
-hpat1 379927 379931 TC_2 4
-hpat1 379941 379945 CT_2 4
-hpat1 379947 379953 AGC_2 6
-hpat1 379965 379971 CA_3 6
-hpat1 379971 379977 CCA_2 6
-hpat1 379988 379992 TT_2 4
-hpat1 379996 380000 TT_2 4
-hpat1 380000 380006 TAG_2 6
-hpat1 380010 380014 GG_2 4
-hpat1 380014 380018 TT_2 4
-hpat1 380037 380041 TC_2 4
-hpat1 380048 380056 GCCT_2 8
-hpat1 380078 380082 TA_2 4
-hpat1 380095 380099 GC_2 4
-hpat1 380103 380107 CC_2 4
-hpat1 380116 380120 TT_2 4
-hpat1 380126 380130 AT_2 4
-hpat1 380141 380145 TT_2 4
-hpat1 380145 380149 AT_2 4
-hpat1 380164 380170 TT_3 6
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-hpat1 388650 388656 TCC_2 6
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-hpat1 388714 388720 TGC_2 6
-hpat1 388735 388739 GA_2 4
-hpat1 388741 388745 CT_2 4
-hpat1 388751 388757 GAA_2 6
-hpat1 388770 388774 GG_2 4
-hpat1 388792 388796 CT_2 4
-hpat1 388796 388800 TC_2 4
-hpat1 388824 388828 GT_2 4
-hpat1 388828 388832 AA_2 4
-hpat1 388836 388840 TA_2 4
-hpat1 388842 388846 TT_2 4
-hpat1 388846 388850 AC_2 4
-hpat1 388853 388857 TG_2 4
-hpat1 388867 388871 GC_2 4
-hpat1 388872 388876 CA_2 4
-hpat1 388876 388880 GG_2 4
-hpat1 388880 388888 AGGG_2 8
-hpat1 388912 388918 CCA_2 6
-hpat1 388940 388944 GA_2 4
-hpat1 388973 388979 TC_3 6
-hpat1 388980 388984 TC_2 4
-hpat1 389000 389006 TTC_2 6
-hpat1 389017 389023 CAC_2 6
-hpat1 389029 389033 GT_2 4
-hpat1 389034 389038 TT_2 4
-hpat1 389041 389049 TT_4 8
-hpat1 389055 389059 TA_2 4
-hpat1 389072 389082 TGTTT_2 10
-hpat1 389118 389122 AC_2 4
-hpat1 389142 389146 TG_2 4
-hpat1 389158 389162 AA_2 4
-hpat1 389162 389168 GTT_2 6
-hpat1 389190 389194 AG_2 4
-hpat1 389204 389208 AC_2 4
-hpat1 389220 389224 AC_2 4
-hpat1 389228 389232 CA_2 4
-hpat1 389263 389269 ATC_2 6
-hpat1 389275 389279 TA_2 4
-hpat1 389279 389283 TG_2 4
-hpat1 389296 389300 CC_2 4
-hpat1 389314 389320 GCT_2 6
-hpat1 389340 389346 TCC_2 6
-hpat1 389367 389371 GT_2 4
-hpat1 389381 389385 AT_2 4
-hpat1 389385 389389 TG_2 4
-hpat1 389393 389397 GA_2 4
-hpat1 389405 389409 TT_2 4
-hpat1 389423 389427 AA_2 4
-hpat1 389448 389452 CT_2 4
-hpat1 389457 389463 ATC_2 6
-hpat1 389465 389469 CT_2 4
-hpat1 389469 389473 GG_2 4
-hpat1 389474 389482 CAGC_2 8
-hpat1 389497 389501 AC_2 4
-hpat1 389508 389512 CC_2 4
-hpat1 389512 389516 TG_2 4
-hpat1 389526 389530 TG_2 4
-hpat1 389562 389568 CAC_2 6
-hpat1 389573 389577 CA_2 4
-hpat1 389578 389582 AA_2 4
-hpat1 389599 389605 TCC_2 6
-hpat1 389607 389611 CC_2 4
-hpat1 389635 389639 CC_2 4
-hpat1 389695 389701 GCT_2 6
-hpat1 389701 389705 CC_2 4
-hpat1 389716 389720 CA_2 4
-hpat1 389727 389731 TG_2 4
-hpat1 389751 389757 TT_3 6
-hpat1 389761 389769 AATT_2 8
-hpat1 389785 389789 AT_2 4
-hpat1 389790 389796 AAT_2 6
-hpat1 389796 389802 TAA_2 6
-hpat1 389813 389817 TC_2 4
-hpat1 389817 389823 ACA_2 6
-hpat1 389828 389832 TG_2 4
-hpat1 389832 389838 GGA_2 6
-hpat1 389840 389846 CAT_2 6
-hpat1 389860 389864 AG_2 4
-hpat1 389885 389889 GG_2 4
-hpat1 389906 389912 CA_3 6
-hpat1 389931 389935 GA_2 4
-hpat1 389958 389962 AG_2 4
-hpat1 389981 389985 GT_2 4
-hpat1 390001 390005 CT_2 4
-hpat1 390006 390010 CC_2 4
-hpat1 390025 390029 GA_2 4
-hpat1 390033 390037 AA_2 4
-hpat1 390046 390050 AT_2 4
hpat1 390060 390072 AATATA_2 12
-hpat1 390104 390110 ATA_2 6
-hpat1 390113 390119 CAG_2 6
-hpat1 390121 390127 TCA_2 6
-hpat1 390128 390132 GA_2 4
-hpat1 390139 390145 ACA_2 6
-hpat1 390151 390155 AA_2 4
-hpat1 390168 390172 AT_2 4
-hpat1 390176 390180 AG_2 4
-hpat1 390184 390188 TA_2 4
-hpat1 390192 390198 TAT_2 6
-hpat1 390209 390213 TA_2 4
-hpat1 390217 390221 AA_2 4
-hpat1 390235 390239 GG_2 4
-hpat1 390276 390280 GC_2 4
-hpat1 390298 390302 AG_2 4
-hpat1 390325 390329 GG_2 4
-hpat1 390332 390336 CC_2 4
-hpat1 390337 390341 TC_2 4
-hpat1 390345 390349 AA_2 4
-hpat1 390353 390359 AA_3 6
-hpat1 390371 390377 TGG_2 6
-hpat1 390403 390409 AGG_2 6
-hpat1 390418 390422 GA_2 4
-hpat1 390435 390443 GGGA_2 8
-hpat1 390459 390463 GA_2 4
-hpat1 390471 390475 TC_2 4
-hpat1 390488 390494 CAA_2 6
-hpat1 390502 390506 CT_2 4
-hpat1 390510 390522 AA_6 12
-hpat1 390535 390547 TAAA_3 12
-hpat1 390569 390573 TA_2 4
-hpat1 390574 390578 AA_2 4
-hpat1 390579 390583 TA_2 4
-hpat1 390584 390588 CA_2 4
-hpat1 390590 390596 ACA_2 6
-hpat1 390598 390602 TT_2 4
-hpat1 390602 390606 AA_2 4
-hpat1 390623 390633 TAAAA_2 10
-hpat1 390639 390645 AAT_2 6
-hpat1 390646 390650 AA_2 4
-hpat1 390650 390654 TT_2 4
-hpat1 390663 390667 CA_2 4
-hpat1 390673 390677 CA_2 4
-hpat1 390707 390715 GTGG_2 8
-hpat1 390736 390740 GA_2 4
-hpat1 390768 390772 TC_2 4
-hpat1 390776 390780 AA_2 4
-hpat1 390784 390790 AA_3 6
-hpat1 390800 390806 GTG_2 6
-hpat1 390810 390814 AC_2 4
-hpat1 390832 390838 AGG_2 6
-hpat1 390847 390851 GA_2 4
-hpat1 390871 390875 AG_2 4
-hpat1 390918 390924 CAA_2 6
-hpat1 390932 390936 CT_2 4
-hpat1 390938 390974 CA_18 36
-hpat1 390984 390988 AA_2 4
-hpat1 391010 391014 AT_2 4
-hpat1 391020 391024 AG_2 4
-hpat1 391033 391037 GA_2 4
-hpat1 391047 391051 AC_2 4
-hpat1 391055 391059 CA_2 4
-hpat1 391079 391083 TT_2 4
-hpat1 391083 391087 AC_2 4
-hpat1 391091 391095 AC_2 4
-hpat1 391103 391107 AA_2 4
-hpat1 391111 391115 AA_2 4
-hpat1 391124 391132 TT_4 8
-hpat1 391132 391138 AA_3 6
-hpat1 391138 391142 CT_2 4
-hpat1 391143 391147 AA_2 4
-hpat1 391153 391157 AG_2 4
-hpat1 391158 391162 AA_2 4
-hpat1 391167 391171 AG_2 4
-hpat1 391176 391180 AA_2 4
-hpat1 391182 391188 AA_3 6
-hpat1 391188 391203 CAAAA_3 15
-hpat1 391206 391210 CC_2 4
-hpat1 391210 391214 AA_2 4
-hpat1 391214 391226 CAA_4 12
-hpat1 391226 391230 AA_2 4
-hpat1 391230 391238 CAAA_2 8
-hpat1 391245 391251 TAC_2 6
-hpat1 391267 391271 AA_2 4
-hpat1 391284 391288 AA_2 4
-hpat1 391289 391293 CC_2 4
-hpat1 391310 391316 AAG_2 6
-hpat1 391321 391325 CA_2 4
-hpat1 391331 391335 CA_2 4
-hpat1 391342 391346 AA_2 4
-hpat1 391351 391355 TT_2 4
-hpat1 391356 391360 TT_2 4
-hpat1 391361 391365 GA_2 4
-hpat1 391370 391374 TC_2 4
-hpat1 391375 391379 CT_2 4
-hpat1 391414 391418 CT_2 4
-hpat1 391433 391437 CA_2 4
-hpat1 391446 391450 TT_2 4
-hpat1 391454 391460 TT_3 6
-hpat1 391462 391466 AG_2 4
-hpat1 391468 391472 GG_2 4
-hpat1 391536 391540 CC_2 4
-hpat1 391568 391572 TG_2 4
-hpat1 391595 391599 TA_2 4
-hpat1 391601 391605 AT_2 4
-hpat1 391606 391610 GA_2 4
-hpat1 391610 391614 AG_2 4
-hpat1 391621 391625 TA_2 4
-hpat1 391625 391629 GA_2 4
-hpat1 391636 391640 TA_2 4
-hpat1 391655 391661 GGA_2 6
-hpat1 391699 391703 TT_2 4
-hpat1 391703 391707 GG_2 4
-hpat1 391718 391730 TTCT_3 12
-hpat1 391730 391742 TT_6 12
-hpat1 391747 391751 GA_2 4
-hpat1 391752 391756 AG_2 4
-hpat1 391756 391760 TC_2 4
-hpat1 391761 391765 CT_2 4
-hpat1 391794 391798 TC_2 4
-hpat1 391811 391815 CT_2 4
-hpat1 391835 391839 TC_2 4
-hpat1 391849 391853 CT_2 4
-hpat1 391879 391885 CCA_2 6
-hpat1 391896 391900 TT_2 4
-hpat1 391904 391908 TT_2 4
-hpat1 391908 391914 TAG_2 6
-hpat1 391945 391949 TC_2 4
-hpat1 391984 391988 CT_2 4
-hpat1 392007 392011 GT_2 4
-hpat1 392014 392020 CCA_2 6
-hpat1 392029 392033 AA_2 4
-hpat1 392040 392044 AA_2 4
-hpat1 392050 392054 TG_2 4
-hpat1 392054 392060 ATG_2 6
-hpat1 392061 392065 GT_2 4
-hpat1 392085 392089 AA_2 4
-hpat1 392101 392105 TA_2 4
-hpat1 392105 392109 TT_2 4
-hpat1 392110 392118 GGTG_2 8
-hpat1 392120 392124 TT_2 4
-hpat1 392129 392133 AT_2 4
-hpat1 392137 392141 TA_2 4
-hpat1 392141 392145 TC_2 4
-hpat1 392157 392161 TA_2 4
-hpat1 392161 392165 AA_2 4
-hpat1 392168 392174 CAG_2 6
-hpat1 392187 392193 TGA_2 6
-hpat1 392195 392199 TC_2 4
-hpat1 392211 392215 TA_2 4
-hpat1 392215 392219 AA_2 4
-hpat1 392222 392228 CAG_2 6
-hpat1 392241 392247 TGA_2 6
-hpat1 392249 392253 TC_2 4
-hpat1 392274 392278 TT_2 4
-hpat1 392350 392354 TC_2 4
-hpat1 392357 392361 AA_2 4
-hpat1 392371 392375 TG_2 4
-hpat1 392472 392478 CAA_2 6
-hpat1 392491 392495 TC_2 4
-hpat1 392521 392525 CC_2 4
-hpat1 392573 392577 TG_2 4
-hpat1 392585 392589 AA_2 4
-hpat1 392590 392594 AA_2 4
-hpat1 392626 392634 TTCA_2 8
-hpat1 392636 392640 AT_2 4
-hpat1 392653 392657 TG_2 4
-hpat1 392673 392677 AC_2 4
-hpat1 392682 392686 AC_2 4
-hpat1 392696 392700 AA_2 4
-hpat1 392718 392722 CT_2 4
-hpat1 392724 392728 GA_2 4
-hpat1 392730 392734 AA_2 4
-hpat1 392749 392757 ATAA_2 8
-hpat1 392759 392763 AA_2 4
-hpat1 392791 392795 GA_2 4
-hpat1 392797 392803 AA_3 6
-hpat1 392822 392826 TG_2 4
-hpat1 392839 392845 GT_3 6
-hpat1 392846 392850 TG_2 4
-hpat1 392878 392882 TT_2 4
-hpat1 392906 392912 AGG_2 6
-hpat1 392963 392969 GT_3 6
-hpat1 392987 392993 CAG_2 6
+hpat1 390510 390522 AAAAAA_2 12
+hpat1 390938 390974 CACA_9 36
+hpat1 391184 391199 AAAAC_3 15
+hpat1 391212 391224 AACAAC_2 12
+hpat1 391729 391741 TTTTTT_2 12
hpat1 393017 393029 GGCAGG_2 12
-hpat1 393047 393051 AG_2 4
-hpat1 393083 393087 TC_2 4
-hpat1 393090 393094 TT_2 4
-hpat1 393103 393107 GA_2 4
-hpat1 393123 393127 GG_2 4
-hpat1 393149 393153 TT_2 4
-hpat1 393160 393164 CT_2 4
-hpat1 393191 393195 GG_2 4
-hpat1 393197 393201 AA_2 4
-hpat1 393201 393205 AG_2 4
-hpat1 393210 393216 AGG_2 6
-hpat1 393219 393228 AGG_3 9
-hpat1 393239 393243 CC_2 4
-hpat1 393244 393248 GA_2 4
hpat1 393262 393274 TGGAGC_2 12
-hpat1 393279 393283 GG_2 4
-hpat1 393285 393291 GGA_2 6
-hpat1 393301 393305 GA_2 4
-hpat1 393329 393335 CTG_2 6
-hpat1 393355 393359 GA_2 4
-hpat1 393359 393363 AA_2 4
-hpat1 393368 393374 GCG_2 6
-hpat1 393414 393418 AA_2 4
-hpat1 393435 393439 GA_2 4
-hpat1 393521 393527 TCA_2 6
-hpat1 393533 393537 AG_2 4
-hpat1 393551 393555 TG_2 4
-hpat1 393560 393564 GG_2 4
-hpat1 393580 393584 CC_2 4
-hpat1 393612 393616 GC_2 4
-hpat1 393628 393634 GC_3 6
-hpat1 393645 393649 CC_2 4
-hpat1 393662 393666 TG_2 4
-hpat1 393670 393676 CCG_2 6
-hpat1 393684 393688 CC_2 4
-hpat1 393695 393699 GC_2 4
hpat1 393713 393725 GCTCCT_2 12
-hpat1 393726 393730 CC_2 4
-hpat1 393732 393742 GCCCC_2 10
hpat1 393744 393759 GCCCC_3 15
-hpat1 393763 393767 CC_2 4
-hpat1 393772 393776 CC_2 4
-hpat1 393780 393784 CG_2 4
-hpat1 393785 393789 CC_2 4
-hpat1 393791 393801 GCCCC_2 10
-hpat1 393804 393808 CC_2 4
-hpat1 393813 393817 CC_2 4
-hpat1 393821 393825 CG_2 4
-hpat1 393826 393830 CC_2 4
-hpat1 393832 393842 GCCCC_2 10
-hpat1 393845 393849 CC_2 4
-hpat1 393854 393858 CC_2 4
-hpat1 393862 393866 CG_2 4
-hpat1 393867 393871 CC_2 4
-hpat1 393874 393878 CC_2 4
-hpat1 393880 393890 GCCCC_2 10
-hpat1 393893 393897 CC_2 4
-hpat1 393902 393906 CC_2 4
hpat1 393906 393918 GCCCCG_2 12
-hpat1 393922 393926 CC_2 4
-hpat1 393930 393934 CG_2 4
-hpat1 393948 393952 CG_2 4
-hpat1 393953 393957 CT_2 4
-hpat1 393980 393988 CGGG_2 8
-hpat1 393993 393997 GG_2 4
-hpat1 394000 394004 CG_2 4
-hpat1 394009 394013 CC_2 4
-hpat1 394013 394019 GGA_2 6
-hpat1 394020 394024 GG_2 4
-hpat1 394025 394029 GG_2 4
-hpat1 394032 394036 CC_2 4
-hpat1 394044 394048 GC_2 4
-hpat1 394062 394066 CC_2 4
-hpat1 394077 394089 CCG_4 12
-hpat1 394126 394130 TT_2 4
-hpat1 394135 394141 CC_3 6
-hpat1 394153 394157 CC_2 4
-hpat1 394163 394167 GG_2 4
+hpat1 394077 394089 CCGCCG_2 12
hpat1 394171 394183 CACTTT_2 12
-hpat1 394183 394187 CT_2 4
-hpat1 394188 394194 CCG_2 6
-hpat1 394202 394206 CC_2 4
-hpat1 394210 394216 GAA_2 6
-hpat1 394218 394222 GG_2 4
-hpat1 394229 394235 GGA_2 6
-hpat1 394235 394239 GA_2 4
-hpat1 394267 394271 GG_2 4
-hpat1 394284 394288 GG_2 4
-hpat1 394289 394295 TCC_2 6
-hpat1 394308 394312 CC_2 4
-hpat1 394317 394323 GGT_2 6
-hpat1 394338 394342 CC_2 4
-hpat1 394343 394349 CTT_2 6
-hpat1 394370 394376 TCC_2 6
-hpat1 394377 394381 GC_2 4
-hpat1 394395 394399 TC_2 4
-hpat1 394400 394404 GC_2 4
-hpat1 394412 394416 CT_2 4
-hpat1 394421 394425 CC_2 4
-hpat1 394454 394458 GT_2 4
-hpat1 394474 394478 CG_2 4
-hpat1 394490 394498 CA_4 8
-hpat1 394508 394512 CG_2 4
-hpat1 394520 394524 CA_2 4
-hpat1 394547 394551 TC_2 4
-hpat1 394555 394559 CT_2 4
-hpat1 394587 394593 AGG_2 6
-hpat1 394599 394605 CC_3 6
-hpat1 394607 394611 GG_2 4
-hpat1 394617 394621 CA_2 4
-hpat1 394637 394641 GA_2 4
-hpat1 394658 394662 CA_2 4
-hpat1 394676 394680 GG_2 4
-hpat1 394700 394704 CC_2 4
-hpat1 394720 394724 CC_2 4
-hpat1 394741 394745 GA_2 4
-hpat1 394745 394749 GG_2 4
-hpat1 394760 394768 CCCT_2 8
-hpat1 394772 394778 CCT_2 6
-hpat1 394778 394782 CC_2 4
-hpat1 394789 394795 TCC_2 6
-hpat1 394803 394809 CTG_2 6
-hpat1 394815 394819 AG_2 4
-hpat1 394826 394830 GG_2 4
-hpat1 394834 394838 GA_2 4
-hpat1 394846 394854 GGCT_2 8
-hpat1 394855 394859 TG_2 4
-hpat1 394861 394865 GA_2 4
-hpat1 394866 394870 GG_2 4
-hpat1 394873 394877 GG_2 4
-hpat1 394883 394887 AG_2 4
-hpat1 394888 394892 AC_2 4
-hpat1 394907 394911 GA_2 4
-hpat1 394911 394917 CCT_2 6
-hpat1 394921 394927 TGG_2 6
-hpat1 394927 394931 GA_2 4
-hpat1 394948 394952 GA_2 4
-hpat1 394956 394960 GG_2 4
-hpat1 394967 394971 CT_2 4
-hpat1 394971 394975 TC_2 4
-hpat1 394979 394983 CC_2 4
-hpat1 395006 395014 AGTC_2 8
-hpat1 395040 395044 CC_2 4
-hpat1 395046 395050 TG_2 4
-hpat1 395051 395055 TC_2 4
-hpat1 395055 395063 CAAA_2 8
-hpat1 395067 395071 AG_2 4
-hpat1 395084 395088 CA_2 4
-hpat1 395090 395094 AT_2 4
-hpat1 395121 395125 CT_2 4
-hpat1 395132 395136 CC_2 4
-hpat1 395141 395149 CTTC_2 8
-hpat1 395152 395156 TC_2 4
-hpat1 395165 395171 TT_3 6
-hpat1 395185 395189 CT_2 4
-hpat1 395206 395210 CT_2 4
-hpat1 395226 395230 AC_2 4
-hpat1 395238 395242 TC_2 4
-hpat1 395263 395267 GT_2 4
-hpat1 395269 395273 CC_2 4
-hpat1 395278 395282 AG_2 4
-hpat1 395286 395290 CC_2 4
-hpat1 395293 395297 TC_2 4
-hpat1 395340 395352 TT_6 12
-hpat1 395373 395377 TC_2 4
-hpat1 395390 395394 GA_2 4
-hpat1 395402 395406 GA_2 4
-hpat1 395406 395410 GG_2 4
-hpat1 395417 395421 TA_2 4
-hpat1 395423 395427 TC_2 4
-hpat1 395427 395431 TG_2 4
-hpat1 395451 395459 GTGG_2 8
-hpat1 395459 395465 CA_3 6
-hpat1 395484 395490 TTG_2 6
-hpat1 395505 395509 AT_2 4
+hpat1 395340 395352 TTTTTT_2 12
hpat1 395518 395530 TGGGAA_2 12
-hpat1 395532 395540 ACAA_2 8
-hpat1 395553 395557 GT_2 4
-hpat1 395557 395566 GAG_3 9
-hpat1 395567 395571 GG_2 4
-hpat1 395572 395576 AT_2 4
-hpat1 395577 395581 AG_2 4
-hpat1 395583 395587 CC_2 4
-hpat1 395592 395596 GA_2 4
-hpat1 395603 395607 TT_2 4
-hpat1 395649 395653 AG_2 4
-hpat1 395655 395661 AGC_2 6
-hpat1 395661 395667 AC_3 6
-hpat1 395676 395682 CCT_2 6
-hpat1 395688 395692 CC_2 4
-hpat1 395696 395700 CT_2 4
-hpat1 395709 395713 AA_2 4
-hpat1 395720 395724 TG_2 4
-hpat1 395735 395741 CTG_2 6
-hpat1 395751 395757 CAG_2 6
-hpat1 395788 395796 GGCG_2 8
-hpat1 395818 395822 GT_2 4
-hpat1 395827 395835 CTGG_2 8
-hpat1 395836 395840 AG_2 4
-hpat1 395849 395853 CC_2 4
-hpat1 395856 395860 GT_2 4
-hpat1 395877 395881 TC_2 4
-hpat1 395901 395907 GAG_2 6
-hpat1 395911 395919 TGGC_2 8
-hpat1 395933 395939 CAG_2 6
-hpat1 395945 395949 AT_2 4
-hpat1 395966 395972 TTC_2 6
-hpat1 395993 395999 AGG_2 6
-hpat1 396034 396038 TG_2 4
-hpat1 396044 396048 AG_2 4
-hpat1 396061 396065 CT_2 4
-hpat1 396067 396073 GT_3 6
-hpat1 396078 396082 TT_2 4
-hpat1 396082 396086 AA_2 4
-hpat1 396107 396111 TC_2 4
-hpat1 396116 396122 GTT_2 6
-hpat1 396122 396128 AGG_2 6
-hpat1 396153 396157 TA_2 4
-hpat1 396161 396167 AGA_2 6
-hpat1 396240 396244 AG_2 4
-hpat1 396248 396252 AT_2 4
-hpat1 396256 396262 TC_3 6
-hpat1 396272 396280 CATT_2 8
-hpat1 396299 396303 AA_2 4
-hpat1 396316 396324 TCCA_2 8
-hpat1 396326 396336 CATCA_2 10
-hpat1 396337 396343 AGG_2 6
-hpat1 396347 396353 GAA_2 6
-hpat1 396355 396359 AC_2 4
-hpat1 396364 396368 CA_2 4
-hpat1 396368 396372 CT_2 4
-hpat1 396377 396381 AG_2 4
-hpat1 396389 396393 AA_2 4
-hpat1 396397 396401 TA_2 4
-hpat1 396403 396409 CTT_2 6
-hpat1 396420 396424 TG_2 4
-hpat1 396440 396444 CA_2 4
-hpat1 396461 396465 GG_2 4
-hpat1 396471 396475 TA_2 4
-hpat1 396481 396485 AT_2 4
-hpat1 396499 396503 GG_2 4
-hpat1 396513 396523 AAGGG_2 10
-hpat1 396524 396528 AG_2 4
-hpat1 396545 396549 TG_2 4
-hpat1 396555 396559 GA_2 4
-hpat1 396577 396581 AC_2 4
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-hpat1 396743 396755 ATTT_3 12
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-hpat1 398104 398110 TGA_2 6
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-hpat1 398171 398175 TT_2 4
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-hpat1 398199 398211 TT_6 12
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-hpat1 398226 398230 CT_2 4
-hpat1 398259 398263 TC_2 4
-hpat1 398300 398304 TC_2 4
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-hpat1 398367 398371 TT_2 4
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-hpat1 398432 398440 CCAC_2 8
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-hpat1 398659 398663 TT_2 4
-hpat1 398663 398669 GAT_2 6
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-hpat1 398690 398694 TT_2 4
-hpat1 398694 398700 GTT_2 6
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-hpat1 398788 398792 TT_2 4
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-hpat1 398951 398959 AATT_2 8
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-hpat1 399011 399015 TA_2 4
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-hpat1 399106 399110 TT_2 4
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-hpat1 399135 399139 TC_2 4
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-hpat1 399183 399193 AA_5 10
-hpat1 399193 399202 CAA_3 9
-hpat1 399204 399208 GG_2 4
-hpat1 399209 399213 TT_2 4
-hpat1 399254 399258 TT_2 4
-hpat1 399262 399266 AA_2 4
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-hpat1 399280 399286 CTT_2 6
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-hpat1 399360 399370 CCTTT_2 10
-hpat1 399377 399383 TT_3 6
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-hpat1 399496 399502 CTA_2 6
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-hpat1 399602 399606 CT_2 4
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-hpat1 399768 399772 AA_2 4
-hpat1 399777 399781 AG_2 4
-hpat1 399791 399807 AA_8 16
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-hpat1 400027 400033 GGC_2 6
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-hpat1 400104 400108 GA_2 4
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-hpat1 400120 400126 AA_3 6
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-hpat1 400196 400202 ATT_2 6
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-hpat1 400266 400270 TC_2 4
-hpat1 400270 400282 AAAG_3 12
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-hpat1 401250 401254 AA_2 4
-hpat1 401254 401266 ACAA_3 12
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-hpat1 403916 403920 AG_2 4
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-hpat1 404002 404006 GG_2 4
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-hpat1 404351 404355 TC_2 4
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-hpat1 404429 404433 AG_2 4
-hpat1 404435 404439 GG_2 4
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hpat1 424000 424012 GTCTAG_2 12
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hpat1 424335 424347 GCCCAG_2 12
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hpat1 424667 424679 CAGCTG_2 12
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hpat1 425323 425335 GTCACA_2 12
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hpat1 428930 428942 GAGGCA_2 12
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-hpat1 507922 507926 TC_2 4
-hpat1 507946 507950 GT_2 4
-hpat1 507952 507958 GCT_2 6
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-hpat1 508051 508055 CC_2 4
-hpat1 508100 508104 AC_2 4
-hpat1 508107 508113 AGG_2 6
-hpat1 508115 508121 AGC_2 6
-hpat1 508147 508151 CT_2 4
-hpat1 508152 508158 CCT_2 6
-hpat1 508182 508186 TC_2 4
-hpat1 508190 508194 GA_2 4
-hpat1 508201 508205 TG_2 4
-hpat1 508210 508214 CA_2 4
-hpat1 508214 508218 TG_2 4
-hpat1 508226 508232 AGG_2 6
-hpat1 508242 508246 TT_2 4
-hpat1 508246 508250 TC_2 4
-hpat1 508254 508264 AAGGA_2 10
-hpat1 508266 508274 TAAG_2 8
-hpat1 508281 508287 AG_3 6
-hpat1 508295 508299 TC_2 4
-hpat1 508355 508359 GA_2 4
-hpat1 508367 508371 CT_2 4
-hpat1 508378 508382 AA_2 4
-hpat1 508402 508406 AT_2 4
-hpat1 508411 508415 GT_2 4
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-hpat1 508455 508459 GA_2 4
-hpat1 508471 508475 CT_2 4
-hpat1 508482 508488 TCT_2 6
-hpat1 508489 508493 AA_2 4
-hpat1 508502 508506 CA_2 4
-hpat1 508516 508520 GA_2 4
-hpat1 508549 508553 TA_2 4
-hpat1 508553 508561 ACAT_2 8
-hpat1 508567 508573 TCT_2 6
-hpat1 508575 508579 AA_2 4
-hpat1 508593 508597 AA_2 4
-hpat1 508601 508609 AGAC_2 8
-hpat1 508610 508616 AAG_2 6
-hpat1 508619 508623 CA_2 4
-hpat1 508627 508633 GGA_2 6
-hpat1 508640 508644 GA_2 4
-hpat1 508645 508651 ATG_2 6
-hpat1 508661 508665 TG_2 4
-hpat1 508691 508695 AA_2 4
-hpat1 508709 508713 AA_2 4
-hpat1 508715 508723 CAAA_2 8
-hpat1 508728 508738 TAGTT_2 10
-hpat1 508743 508749 TAT_2 6
-hpat1 508767 508773 ATT_2 6
-hpat1 508773 508789 TTAT_4 16
-hpat1 508789 508793 TT_2 4
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-hpat1 508799 508803 GG_2 4
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-hpat1 508835 508839 GT_2 4
-hpat1 508847 508851 CT_2 4
-hpat1 508858 508862 CA_2 4
-hpat1 508890 508896 TCC_2 6
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-hpat1 508929 508933 CA_2 4
-hpat1 508935 508941 CCA_2 6
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-hpat1 508995 509001 TCC_2 6
-hpat1 509001 509007 CCA_2 6
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-hpat1 509066 509070 GT_2 4
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-hpat1 509110 509114 AT_2 4
-hpat1 509126 509132 AT_3 6
-hpat1 509133 509137 GA_2 4
-hpat1 509162 509166 AA_2 4
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-hpat1 509195 509199 AT_2 4
-hpat1 509216 509220 AG_2 4
-hpat1 509223 509227 GA_2 4
-hpat1 509231 509235 AG_2 4
-hpat1 509244 509248 AA_2 4
-hpat1 509269 509273 GT_2 4
-hpat1 509279 509283 AA_2 4
-hpat1 509291 509295 TA_2 4
-hpat1 509305 509309 AA_2 4
-hpat1 509320 509326 CTT_2 6
-hpat1 509326 509330 TA_2 4
-hpat1 509347 509351 TT_2 4
-hpat1 509353 509357 AT_2 4
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-hpat1 509392 509396 AA_2 4
-hpat1 509399 509403 AA_2 4
-hpat1 509411 509415 CA_2 4
-hpat1 509421 509425 TA_2 4
-hpat1 509425 509435 ATGTT_2 10
-hpat1 509435 509439 CA_2 4
-hpat1 509468 509472 AA_2 4
-hpat1 509474 509478 AA_2 4
-hpat1 509501 509505 AA_2 4
-hpat1 509510 509514 TA_2 4
-hpat1 509532 509538 TAC_2 6
-hpat1 509542 509548 TAA_2 6
-hpat1 509565 509573 AC_4 8
-hpat1 509581 509587 TGA_2 6
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-hpat1 509592 509596 AG_2 4
-hpat1 509605 509613 TGAA_2 8
-hpat1 509622 509626 TC_2 4
-hpat1 509626 509630 AA_2 4
-hpat1 509654 509658 TA_2 4
-hpat1 509669 509673 AA_2 4
-hpat1 509676 509680 AA_2 4
-hpat1 509742 509750 GGAT_2 8
-hpat1 509750 509754 CA_2 4
-hpat1 509761 509765 GA_2 4
-hpat1 509767 509771 GA_2 4
-hpat1 509783 509787 AC_2 4
-hpat1 509794 509798 CC_2 4
-hpat1 509799 509803 TC_2 4
-hpat1 509807 509811 AA_2 4
-hpat1 509811 509815 AT_2 4
-hpat1 509815 509821 AA_3 6
-hpat1 509833 509839 GGT_2 6
-hpat1 509841 509845 GC_2 4
-hpat1 509856 509862 ACT_2 6
-hpat1 509887 509891 GA_2 4
-hpat1 509920 509924 AG_2 4
-hpat1 509934 509938 TC_2 4
-hpat1 509963 509969 GTA_2 6
-hpat1 509972 509982 CAGAA_2 10
-hpat1 509993 509997 AG_2 4
-hpat1 510001 510005 GG_2 4
-hpat1 510047 510051 AT_2 4
-hpat1 510070 510074 TG_2 4
-hpat1 510092 510100 TATG_2 8
-hpat1 510104 510108 AA_2 4
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-hpat1 510146 510150 TG_2 4
-hpat1 510159 510167 AA_4 8
-hpat1 510171 510177 AA_3 6
-hpat1 510180 510186 AA_3 6
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-hpat1 510205 510209 AA_2 4
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-hpat1 510232 510238 GCT_2 6
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-hpat1 510340 510344 AA_2 4
-hpat1 510348 510352 AA_2 4
-hpat1 510361 510365 GT_2 4
-hpat1 510365 510371 GGT_2 6
-hpat1 510388 510394 GCT_2 6
-hpat1 510397 510401 AG_2 4
-hpat1 510410 510414 GG_2 4
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-hpat1 510431 510435 GA_2 4
-hpat1 510478 510482 GA_2 4
-hpat1 510483 510487 AG_2 4
-hpat1 510497 510501 TC_2 4
-hpat1 510501 510519 AA_9 18
-hpat1 510520 510526 TAA_2 6
-hpat1 510528 510536 AAAT_2 8
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-hpat1 510540 510544 GA_2 4
-hpat1 510558 510562 GT_2 4
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-hpat1 510604 510608 AC_2 4
-hpat1 510620 510624 TC_2 4
-hpat1 510629 510633 AA_2 4
-hpat1 510633 510648 ACA_5 15
-hpat1 510650 510654 AC_2 4
-hpat1 510654 510658 AA_2 4
-hpat1 510667 510671 GT_2 4
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-hpat1 510701 510707 AGG_2 6
-hpat1 510716 510720 GA_2 4
-hpat1 510733 510739 AGG_2 6
-hpat1 510774 510778 GA_2 4
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-hpat1 510808 510812 GA_2 4
-hpat1 510819 510823 AA_2 4
-hpat1 510826 510830 GG_2 4
-hpat1 510830 510836 TA_3 6
-hpat1 510837 510843 TA_3 6
-hpat1 510850 510854 TA_2 4
-hpat1 510869 510873 CA_2 4
-hpat1 510873 510879 AT_3 6
-hpat1 510886 510890 AT_2 4
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-hpat1 510935 510939 GG_2 4
-hpat1 510953 510957 GA_2 4
-hpat1 510961 510965 AG_2 4
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-hpat1 511039 511043 AA_2 4
-hpat1 511058 511066 TGCA_2 8
-hpat1 511068 511072 TG_2 4
-hpat1 511102 511106 TG_2 4
-hpat1 511140 511144 CA_2 4
-hpat1 511144 511148 GT_2 4
-hpat1 511165 511173 GACA_2 8
-hpat1 511173 511177 CT_2 4
-hpat1 511182 511186 AA_2 4
-hpat1 511186 511198 TCAA_3 12
-hpat1 511202 511206 TT_2 4
-hpat1 511210 511218 AA_4 8
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-hpat1 511387 511391 GA_2 4
-hpat1 511410 511414 GA_2 4
-hpat1 511420 511424 CT_2 4
+hpat1 506287 506299 AAAGAC_2 12
+hpat1 507515 507527 AGTAAC_2 12
+hpat1 510501 510519 AAA_6 18
+hpat1 510632 510647 AAC_5 15
+hpat1 510703 510715 GAGGCT_2 12
+hpat1 510734 510746 GGAGGT_2 12
hpat1 511424 511436 ATAAAA_2 12
-hpat1 511437 511441 TT_2 4
-hpat1 511441 511445 AA_2 4
-hpat1 511454 511458 GC_2 4
-hpat1 511485 511489 TG_2 4
-hpat1 511498 511506 GGCG_2 8
-hpat1 511518 511524 AGA_2 6
-hpat1 511526 511530 GA_2 4
-hpat1 511553 511557 CC_2 4
-hpat1 511558 511562 TC_2 4
-hpat1 511566 511570 AA_2 4
-hpat1 511574 511578 AA_2 4
-hpat1 511590 511596 TGG_2 6
-hpat1 511599 511603 GC_2 4
-hpat1 511621 511627 AGG_2 6
-hpat1 511635 511639 AG_2 4
-hpat1 511660 511664 AG_2 4
-hpat1 511677 511681 GA_2 4
-hpat1 511710 511714 AG_2 4
-hpat1 511715 511719 GA_2 4
-hpat1 511724 511728 TC_2 4
-hpat1 511728 511744 AA_8 16
-hpat1 511746 511756 AA_5 10
-hpat1 511756 511765 TAA_3 9
-hpat1 511771 511775 TG_2 4
-hpat1 511775 511779 CA_2 4
-hpat1 511801 511805 AC_2 4
-hpat1 511825 511829 GT_2 4
-hpat1 511855 511859 GA_2 4
-hpat1 511878 511882 GA_2 4
-hpat1 511887 511891 TC_2 4
-hpat1 511893 511899 TT_3 6
-hpat1 511905 511909 AA_2 4
-hpat1 511941 511945 GT_2 4
-hpat1 511958 511962 TG_2 4
-hpat1 511982 511986 GA_2 4
-hpat1 511988 511994 GGA_2 6
-hpat1 511994 511998 AC_2 4
-hpat1 512006 512012 AGG_2 6
-hpat1 512029 512033 TG_2 4
-hpat1 512047 512051 CT_2 4
-hpat1 512082 512086 AA_2 4
-hpat1 512087 512091 AA_2 4
-hpat1 512111 512115 AA_2 4
-hpat1 512122 512126 AA_2 4
-hpat1 512137 512141 AC_2 4
-hpat1 512141 512145 AT_2 4
-hpat1 512158 512162 AA_2 4
-hpat1 512171 512175 AG_2 4
-hpat1 512186 512192 AA_3 6
-hpat1 512197 512201 AA_2 4
-hpat1 512201 512207 GCA_2 6
-hpat1 512216 512220 AT_2 4
-hpat1 512227 512231 AG_2 4
-hpat1 512235 512239 CA_2 4
-hpat1 512256 512260 AA_2 4
-hpat1 512299 512303 AC_2 4
-hpat1 512345 512349 GA_2 4
-hpat1 512363 512367 AG_2 4
-hpat1 512372 512376 CC_2 4
-hpat1 512379 512383 TC_2 4
-hpat1 512386 512390 AA_2 4
-hpat1 512397 512401 AA_2 4
-hpat1 512414 512420 TGG_2 6
-hpat1 512485 512489 GA_2 4
-hpat1 512508 512512 GA_2 4
-hpat1 512517 512521 TC_2 4
-hpat1 512521 512527 AA_3 6
-hpat1 512531 512535 TT_2 4
-hpat1 512535 512544 TAA_3 9
-hpat1 512553 512559 AA_3 6
-hpat1 512580 512586 AGG_2 6
-hpat1 512653 512657 CT_2 4
-hpat1 512669 512673 AG_2 4
-hpat1 512684 512688 CT_2 4
-hpat1 512694 512700 GG_3 6
-hpat1 512700 512706 GAA_2 6
-hpat1 512709 512713 AA_2 4
-hpat1 512719 512723 GT_2 4
-hpat1 512735 512745 AA_5 10
-hpat1 512755 512759 GT_2 4
-hpat1 512810 512814 CA_2 4
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-hpat1 512867 512871 AA_2 4
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-hpat1 512875 512881 AA_3 6
-hpat1 512889 512893 GT_2 4
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-hpat1 512914 512920 CAG_2 6
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-hpat1 513012 513016 GA_2 4
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-hpat1 513025 513031 AA_3 6
-hpat1 513031 513043 AGAA_3 12
-hpat1 513044 513060 GA_8 16
-hpat1 513061 513071 AG_5 10
-hpat1 513071 513079 ACAG_2 8
-hpat1 513079 513121 AG_21 42
-hpat1 513126 513130 AT_2 4
-hpat1 513145 513149 AT_2 4
-hpat1 513242 513246 AA_2 4
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-hpat1 513264 513270 AAC_2 6
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-hpat1 513278 513282 CA_2 4
-hpat1 513296 513302 AGA_2 6
-hpat1 513302 513306 AA_2 4
-hpat1 513315 513319 AA_2 4
-hpat1 513342 513346 TC_2 4
-hpat1 513349 513353 GA_2 4
-hpat1 513353 513357 AA_2 4
-hpat1 513359 513363 AA_2 4
-hpat1 513367 513371 AC_2 4
-hpat1 513371 513377 AA_3 6
-hpat1 513379 513383 AA_2 4
-hpat1 513433 513443 TTCTA_2 10
-hpat1 513457 513461 CA_2 4
-hpat1 513469 513473 TT_2 4
-hpat1 513474 513478 AA_2 4
-hpat1 513489 513497 ACTG_2 8
-hpat1 513510 513516 CTC_2 6
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-hpat1 513531 513535 TT_2 4
-hpat1 513560 513568 TGCT_2 8
-hpat1 513569 513573 GG_2 4
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-hpat1 513668 513672 CT_2 4
-hpat1 513690 513694 CC_2 4
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-hpat1 513699 513705 CT_3 6
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-hpat1 513733 513741 TACA_2 8
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-hpat1 513781 513789 ATTT_2 8
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-hpat1 513926 513930 AA_2 4
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-hpat1 513947 513951 TA_2 4
-hpat1 513961 513969 CATC_2 8
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-hpat1 513996 514002 CTA_2 6
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-hpat1 514055 514059 GA_2 4
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-hpat1 514100 514104 CA_2 4
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-hpat1 514173 514177 AA_2 4
-hpat1 514179 514185 CAT_2 6
-hpat1 514193 514201 AGAA_2 8
-hpat1 514206 514210 AC_2 4
-hpat1 514241 514245 AT_2 4
-hpat1 514253 514261 ACCT_2 8
-hpat1 514270 514274 GA_2 4
-hpat1 514284 514288 AT_2 4
-hpat1 514304 514308 CC_2 4
-hpat1 514314 514320 CTT_2 6
-hpat1 514328 514334 TGG_2 6
-hpat1 514354 514360 CAT_2 6
-hpat1 514387 514393 TAA_2 6
-hpat1 514406 514410 AA_2 4
-hpat1 514415 514419 AA_2 4
-hpat1 514446 514450 AA_2 4
-hpat1 514474 514478 AT_2 4
-hpat1 514480 514484 TG_2 4
-hpat1 514493 514501 GTCA_2 8
-hpat1 514521 514525 TT_2 4
-hpat1 514525 514533 TG_4 8
-hpat1 514546 514550 CT_2 4
-hpat1 514558 514566 GGGT_2 8
-hpat1 514598 514607 TCC_3 9
-hpat1 514618 514624 TAG_2 6
-hpat1 514640 514644 AC_2 4
-hpat1 514650 514654 CC_2 4
-hpat1 514665 514671 TT_3 6
-hpat1 514672 514680 TT_4 8
-hpat1 514680 514692 CTTT_3 12
-hpat1 514694 514702 TT_4 8
-hpat1 514705 514709 GA_2 4
-hpat1 514713 514717 TT_2 4
-hpat1 514718 514722 TT_2 4
-hpat1 514735 514745 TGTTA_2 10
-hpat1 514779 514785 TCC_2 6
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-hpat1 514833 514841 CCAG_2 8
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-hpat1 515084 515088 AA_2 4
-hpat1 515094 515102 AAAT_2 8
-hpat1 515112 515116 TT_2 4
-hpat1 515117 515121 TT_2 4
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-hpat1 515174 515180 GTG_2 6
-hpat1 515197 515203 AGC_2 6
-hpat1 515203 515207 CT_2 4
-hpat1 515215 515219 TC_2 4
-hpat1 515250 515259 CAC_3 9
-hpat1 515268 515284 TT_8 16
-hpat1 515287 515293 AAG_2 6
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-hpat1 515406 515410 TT_2 4
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-hpat1 515475 515479 TG_2 4
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-hpat1 515872 515876 AA_2 4
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-hpat1 516070 516074 AA_2 4
-hpat1 516086 516090 AA_2 4
-hpat1 516091 516097 TCA_2 6
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-hpat1 516126 516132 GT_3 6
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-hpat1 516143 516147 CA_2 4
-hpat1 516151 516155 TG_2 4
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hpat1 532764 532779 TAT_5 15
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hpat1 535745 535773 AAAG_7 28
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hpat1 538739 538751 AAATAT_2 12
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hpat1 539338 539350 GGAGGT_2 12
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-hpat1 540006 540010 AG_2 4
-hpat1 540023 540027 GA_2 4
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-hpat1 572049 572059 AAGAG_2 10
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-hpat1 572962 572968 CTA_2 6
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-hpat1 574001 574010 CAC_3 9
-hpat1 574020 574024 TT_2 4
-hpat1 574027 574031 TT_2 4
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-hpat1 574144 574150 GT_3 6
-hpat1 574150 574154 TT_2 4
-hpat1 574155 574159 AC_2 4
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-hpat1 574167 574171 AC_2 4
-hpat1 574180 574184 TT_2 4
-hpat1 574188 574192 AG_2 4
-hpat1 574203 574207 AG_2 4
-hpat1 574237 574241 TG_2 4
-hpat1 574247 574257 TTGTT_2 10
-hpat1 574270 574274 TT_2 4
-hpat1 574299 574303 GA_2 4
-hpat1 574309 574313 TT_2 4
-hpat1 574319 574327 AGGG_2 8
-hpat1 574340 574344 TT_2 4
-hpat1 574347 574353 ATA_2 6
-hpat1 574361 574365 TT_2 4
-hpat1 574366 574372 AGA_2 6
-hpat1 574386 574392 AA_3 6
-hpat1 574392 574398 TAT_2 6
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-hpat1 574412 574418 ATA_2 6
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-hpat1 574657 574661 AG_2 4
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-hpat1 574714 574722 CAGA_2 8
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-hpat1 574767 574771 GG_2 4
-hpat1 574776 574786 GGAGG_2 10
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-hpat1 575190 575196 ACT_2 6
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-hpat1 575225 575229 AA_2 4
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+hpat1 566983 566995 AAAACA_2 12
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hpat1 575451 575471 AATTA_4 20
hpat1 575471 575483 AATTTT_2 12
-hpat1 575484 575488 AG_2 4
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hpat1 575668 575680 ATTTTT_2 12
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hpat1 575801 575813 ATTTTT_2 12
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-hpat1 575870 575894 AC_12 24
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-hpat1 576000 576004 GA_2 4
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-hpat1 576051 576059 AGGT_2 8
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-hpat1 576126 576134 AGGG_2 8
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-hpat1 576199 576205 GA_3 6
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-hpat1 577211 577227 TT_8 16
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-hpat1 577396 577400 GG_2 4
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hpat1 577976 577991 TTGGT_3 15
hpat1 578001 578013 CCTTTC_2 12
-hpat1 578027 578033 CC_3 6
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-hpat1 578460 578468 GATT_2 8
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-hpat1 578648 578656 GCAT_2 8
-hpat1 578670 578702 TA_16 32
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hpat1 581451 581463 CAGGGG_2 12
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-hpat1 587122 587131 GTG_3 9
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hpat1 587187 587199 GGAGGT_2 12
-hpat1 587243 587247 AG_2 4
-hpat1 587248 587252 GA_2 4
-hpat1 587260 587276 AA_8 16
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-hpat1 589809 589813 CT_2 4
-hpat1 589814 589824 CTCAG_2 10
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hpat1 591896 591908 CAGGGA_2 12
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hpat1 592320 592332 GGAGGC_2 12
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-hpat1 593661 593665 CC_2 4
-hpat1 593689 593693 GA_2 4
-hpat1 593693 593697 CA_2 4
-hpat1 593733 593737 TC_2 4
-hpat1 593741 593745 CT_2 4
-hpat1 593745 593749 GA_2 4
-hpat1 593756 593760 TG_2 4
-hpat1 593762 593772 TCCCC_2 10
-hpat1 593783 593787 CA_2 4
+hpat1 592394 592412 AAA_6 18
hpat1 593793 593805 TCATCT_2 12
-hpat1 593805 593815 CCCTG_2 10
-hpat1 593820 593824 GG_2 4
-hpat1 593844 593850 TGG_2 6
-hpat1 593856 593860 GG_2 4
-hpat1 593874 593878 TC_2 4
-hpat1 593879 593883 GG_2 4
-hpat1 593884 593888 TC_2 4
-hpat1 593888 593892 AG_2 4
-hpat1 593934 593942 GAAT_2 8
-hpat1 593970 593974 GA_2 4
-hpat1 593975 593979 CC_2 4
-hpat1 593988 593998 TCCCA_2 10
-hpat1 594025 594029 TC_2 4
-hpat1 594039 594043 GG_2 4
-hpat1 594051 594055 GG_2 4
-hpat1 594057 594061 CA_2 4
-hpat1 594067 594073 AGC_2 6
-hpat1 594083 594087 GA_2 4
-hpat1 594090 594094 CA_2 4
-hpat1 594105 594111 AAG_2 6
-hpat1 594113 594119 CGA_2 6
-hpat1 594142 594146 GT_2 4
-hpat1 594162 594166 AT_2 4
-hpat1 594167 594173 TGA_2 6
-hpat1 594175 594183 CAGA_2 8
-hpat1 594184 594190 GGT_2 6
-hpat1 594205 594209 AG_2 4
-hpat1 594249 594253 TG_2 4
-hpat1 594262 594268 CAG_2 6
-hpat1 594275 594279 GG_2 4
-hpat1 594292 594296 CC_2 4
-hpat1 594312 594318 CCA_2 6
-hpat1 594328 594334 CT_3 6
-hpat1 594346 594350 CC_2 4
-hpat1 594364 594370 GCT_2 6
-hpat1 594379 594385 GTT_2 6
-hpat1 594392 594398 CTT_2 6
-hpat1 594407 594411 AA_2 4
-hpat1 594427 594431 CA_2 4
-hpat1 594436 594440 GG_2 4
-hpat1 594481 594485 AG_2 4
-hpat1 594490 594494 CT_2 4
-hpat1 594499 594505 CA_3 6
-hpat1 594506 594510 CC_2 4
-hpat1 594516 594520 CC_2 4
-hpat1 594549 594553 AC_2 4
-hpat1 594566 594570 CA_2 4
-hpat1 594574 594582 CTCC_2 8
-hpat1 594592 594596 AG_2 4
-hpat1 594600 594604 CT_2 4
-hpat1 594608 594612 AC_2 4
-hpat1 594619 594623 TT_2 4
-hpat1 594623 594627 GG_2 4
-hpat1 594630 594634 GG_2 4
-hpat1 594635 594639 CT_2 4
-hpat1 594640 594644 AG_2 4
-hpat1 594646 594650 CC_2 4
-hpat1 594650 594656 TTC_2 6
-hpat1 594688 594692 CT_2 4
-hpat1 594704 594708 TG_2 4
-hpat1 594709 594715 CCT_2 6
-hpat1 594715 594721 TTC_2 6
-hpat1 594725 594729 TC_2 4
-hpat1 594732 594736 CT_2 4
-hpat1 594755 594759 GG_2 4
-hpat1 594762 594768 ATT_2 6
-hpat1 594775 594779 GG_2 4
-hpat1 594782 594790 AC_4 8
-hpat1 594808 594812 GC_2 4
-hpat1 594834 594838 TG_2 4
-hpat1 594852 594856 TC_2 4
-hpat1 594870 594876 TCA_2 6
-hpat1 594880 594884 AA_2 4
-hpat1 594891 594895 AA_2 4
-hpat1 594899 594907 CCTG_2 8
-hpat1 594917 594921 TG_2 4
-hpat1 594926 594932 AA_3 6
-hpat1 594937 594941 TG_2 4
-hpat1 594943 594947 GC_2 4
-hpat1 594952 594956 CA_2 4
-hpat1 594970 594974 AA_2 4
-hpat1 595011 595017 CAG_2 6
-hpat1 595017 595025 GAAG_2 8
-hpat1 595031 595035 CA_2 4
-hpat1 595047 595051 GG_2 4
-hpat1 595051 595055 AT_2 4
-hpat1 595057 595061 CA_2 4
-hpat1 595085 595089 CT_2 4
-hpat1 595092 595096 TT_2 4
-hpat1 595113 595117 GG_2 4
-hpat1 595148 595152 GG_2 4
-hpat1 595183 595187 CC_2 4
-hpat1 595198 595202 GG_2 4
-hpat1 595203 595207 CC_2 4
-hpat1 595212 595216 CT_2 4
-hpat1 595227 595231 AG_2 4
-hpat1 595231 595235 GC_2 4
-hpat1 595237 595243 CC_3 6
-hpat1 595248 595252 CC_2 4
-hpat1 595257 595263 GGC_2 6
-hpat1 595276 595282 GCA_2 6
-hpat1 595288 595292 CC_2 4
-hpat1 595295 595299 GC_2 4
-hpat1 595328 595332 GC_2 4
-hpat1 595336 595342 GGC_2 6
-hpat1 595348 595360 CGG_4 12
-hpat1 595365 595369 GC_2 4
-hpat1 595382 595386 CG_2 4
-hpat1 595405 595411 CGT_2 6
-hpat1 595424 595433 CAG_3 9
-hpat1 595447 595451 GC_2 4
-hpat1 595469 595473 GC_2 4
-hpat1 595477 595481 TC_2 4
-hpat1 595514 595518 GG_2 4
-hpat1 595526 595530 GC_2 4
-hpat1 595531 595535 GC_2 4
-hpat1 595545 595549 GT_2 4
-hpat1 595554 595558 CT_2 4
+hpat1 595348 595360 CGGCGG_2 12
hpat1 595566 595578 TCCCGC_2 12
-hpat1 595584 595590 GCC_2 6
-hpat1 595601 595613 CAC_4 12
-hpat1 595613 595617 GG_2 4
-hpat1 595619 595623 CG_2 4
-hpat1 595623 595635 CCG_4 12
-hpat1 595635 595643 CCCG_2 8
-hpat1 595643 595651 CCGC_2 8
-hpat1 595651 595655 CC_2 4
-hpat1 595655 595659 GG_2 4
+hpat1 595601 595613 CACCAC_2 12
+hpat1 595621 595636 CGC_5 15
hpat1 595664 595679 GCCGC_3 15
-hpat1 595691 595697 GCA_2 6
-hpat1 595715 595719 CG_2 4
-hpat1 595722 595726 CT_2 4
-hpat1 595735 595739 TC_2 4
-hpat1 595751 595757 CAG_2 6
-hpat1 595780 595786 GC_3 6
-hpat1 595795 595801 GCA_2 6
-hpat1 595801 595805 GC_2 4
-hpat1 595816 595820 GC_2 4
-hpat1 595824 595828 CG_2 4
-hpat1 595829 595835 CC_3 6
-hpat1 595837 595841 GC_2 4
-hpat1 595841 595845 CG_2 4
-hpat1 595858 595862 CG_2 4
-hpat1 595862 595866 CC_2 4
-hpat1 595871 595875 GC_2 4
-hpat1 595878 595884 CG_3 6
-hpat1 595893 595897 CC_2 4
-hpat1 595902 595906 CC_2 4
-hpat1 595911 595915 TA_2 4
-hpat1 595918 595926 GAGG_2 8
-hpat1 595939 595945 GCC_2 6
-hpat1 595945 595953 CCGG_2 8
-hpat1 595978 595982 GG_2 4
-hpat1 595988 595994 CCG_2 6
-hpat1 596030 596034 CC_2 4
-hpat1 596057 596063 CGG_2 6
-hpat1 596067 596071 CC_2 4
-hpat1 596076 596080 CC_2 4
-hpat1 596131 596135 GG_2 4
-hpat1 596152 596156 TT_2 4
-hpat1 596158 596162 TC_2 4
-hpat1 596170 596176 ACC_2 6
-hpat1 596179 596183 GA_2 4
-hpat1 596183 596187 CG_2 4
-hpat1 596199 596203 TC_2 4
-hpat1 596203 596209 CT_3 6
-hpat1 596245 596249 AG_2 4
-hpat1 596258 596262 GT_2 4
-hpat1 596262 596270 CTGC_2 8
-hpat1 596319 596323 GG_2 4
-hpat1 596325 596329 GG_2 4
-hpat1 596330 596334 TT_2 4
-hpat1 596342 596346 AG_2 4
-hpat1 596402 596406 TT_2 4
-hpat1 596426 596435 GTG_3 9
-hpat1 596441 596445 GA_2 4
-hpat1 596445 596449 AC_2 4
-hpat1 596452 596456 GA_2 4
-hpat1 596461 596465 TA_2 4
-hpat1 596489 596493 GT_2 4
-hpat1 596514 596518 AA_2 4
-hpat1 596518 596527 AGA_3 9
-hpat1 596527 596537 AA_5 10
-hpat1 596538 596548 CAAAA_2 10
-hpat1 596549 596553 CA_2 4
-hpat1 596555 596559 AC_2 4
-hpat1 596561 596565 AC_2 4
-hpat1 596566 596572 AGT_2 6
-hpat1 596572 596580 TCGT_2 8
-hpat1 596580 596584 TT_2 4
-hpat1 596585 596591 CAA_2 6
-hpat1 596591 596595 AT_2 4
-hpat1 596607 596613 CTA_2 6
-hpat1 596613 596617 TG_2 4
-hpat1 596627 596631 TT_2 4
-hpat1 596655 596659 AA_2 4
-hpat1 596663 596669 TTC_2 6
-hpat1 596687 596691 TT_2 4
-hpat1 596700 596706 ACT_2 6
-hpat1 596706 596710 GT_2 4
-hpat1 596724 596730 TA_3 6
-hpat1 596730 596734 CT_2 4
-hpat1 596737 596741 GC_2 4
-hpat1 596781 596787 AG_3 6
-hpat1 596816 596822 GGC_2 6
-hpat1 596851 596855 CT_2 4
-hpat1 596864 596873 ACC_3 9
-hpat1 596880 596890 CA_5 10
-hpat1 596949 596953 TG_2 4
-hpat1 596955 596959 CT_2 4
-hpat1 596961 596965 AG_2 4
-hpat1 596980 596986 GGT_2 6
-hpat1 596990 596994 GG_2 4
-hpat1 596994 596998 TC_2 4
-hpat1 597000 597004 TC_2 4
-hpat1 597012 597018 CTG_2 6
-hpat1 597023 597029 CT_3 6
-hpat1 597065 597069 AA_2 4
-hpat1 597088 597092 GT_2 4
-hpat1 597094 597102 CAGA_2 8
-hpat1 597102 597106 GC_2 4
-hpat1 597108 597118 GGAGT_2 10
-hpat1 597137 597141 TT_2 4
-hpat1 597143 597149 CTC_2 6
-hpat1 597159 597163 TT_2 4
-hpat1 597180 597184 CT_2 4
-hpat1 597191 597195 TG_2 4
-hpat1 597228 597232 GG_2 4
-hpat1 597232 597238 AAG_2 6
-hpat1 597266 597270 GG_2 4
-hpat1 597270 597276 GAG_2 6
-hpat1 597276 597280 CC_2 4
-hpat1 597300 597304 GA_2 4
-hpat1 597313 597317 CA_2 4
-hpat1 597324 597330 CC_3 6
-hpat1 597351 597355 CC_2 4
-hpat1 597371 597375 GG_2 4
-hpat1 597375 597381 AGG_2 6
-hpat1 597381 597385 AA_2 4
-hpat1 597385 597393 CAGC_2 8
-hpat1 597398 597402 CC_2 4
-hpat1 597404 597408 CC_2 4
-hpat1 597421 597429 CA_4 8
-hpat1 597430 597434 CC_2 4
-hpat1 597441 597450 GCT_3 9
-hpat1 597464 597470 ATT_2 6
-hpat1 597475 597479 GA_2 4
-hpat1 597480 597488 TTCC_2 8
-hpat1 597494 597498 GC_2 4
-hpat1 597498 597504 CTC_2 6
-hpat1 597507 597511 GG_2 4
-hpat1 597519 597529 TCACT_2 10
-hpat1 597536 597540 TC_2 4
-hpat1 597540 597544 CC_2 4
-hpat1 597545 597549 TC_2 4
-hpat1 597549 597553 CC_2 4
-hpat1 597555 597561 CT_3 6
-hpat1 597590 597594 CT_2 4
-hpat1 597600 597604 CC_2 4
-hpat1 597626 597630 GA_2 4
-hpat1 597632 597640 CCAA_2 8
-hpat1 597665 597669 AG_2 4
-hpat1 597686 597694 TCAT_2 8
-hpat1 597714 597718 TT_2 4
-hpat1 597719 597723 AC_2 4
-hpat1 597739 597745 AGA_2 6
-hpat1 597750 597758 ATGA_2 8
-hpat1 597762 597766 GA_2 4
-hpat1 597782 597786 GA_2 4
-hpat1 597786 597790 GG_2 4
-hpat1 597823 597827 TG_2 4
-hpat1 597853 597859 AG_3 6
-hpat1 597882 597888 GCT_2 6
-hpat1 597892 597896 AG_2 4
-hpat1 597896 597900 TC_2 4
-hpat1 597909 597913 CT_2 4
-hpat1 597914 597918 AA_2 4
-hpat1 597919 597923 GA_2 4
-hpat1 597923 597929 TAA_2 6
-hpat1 597968 597972 TG_2 4
-hpat1 597977 597981 AG_2 4
-hpat1 597991 597997 CA_3 6
-hpat1 598013 598017 GA_2 4
-hpat1 598023 598027 TG_2 4
-hpat1 598033 598037 TT_2 4
-hpat1 598039 598043 GG_2 4
-hpat1 598047 598051 CC_2 4
-hpat1 598075 598081 AGC_2 6
-hpat1 598087 598091 TT_2 4
-hpat1 598117 598121 GG_2 4
-hpat1 598129 598133 CA_2 4
-hpat1 598134 598138 TC_2 4
-hpat1 598147 598151 AC_2 4
-hpat1 598152 598156 GG_2 4
-hpat1 598166 598170 CC_2 4
-hpat1 598173 598177 TC_2 4
-hpat1 598186 598190 CT_2 4
-hpat1 598198 598202 CA_2 4
-hpat1 598209 598213 CC_2 4
-hpat1 598230 598236 CTT_2 6
-hpat1 598241 598247 CC_3 6
-hpat1 598250 598254 CC_2 4
-hpat1 598260 598264 TC_2 4
-hpat1 598308 598312 TC_2 4
-hpat1 598328 598334 ACC_2 6
-hpat1 598353 598357 TC_2 4
-hpat1 598370 598374 CC_2 4
-hpat1 598377 598381 CT_2 4
-hpat1 598387 598391 CC_2 4
-hpat1 598408 598412 TT_2 4
-hpat1 598412 598416 TA_2 4
-hpat1 598432 598444 TTCA_3 12
-hpat1 598447 598455 ATTC_2 8
-hpat1 598460 598464 AT_2 4
-hpat1 598481 598485 TG_2 4
-hpat1 598490 598494 CA_2 4
-hpat1 598513 598519 CAG_2 6
-hpat1 598520 598524 AG_2 4
-hpat1 598531 598535 AT_2 4
-hpat1 598545 598551 ACC_2 6
-hpat1 598553 598557 TC_2 4
-hpat1 598565 598569 AG_2 4
-hpat1 598569 598573 TA_2 4
-hpat1 598581 598585 GG_2 4
-hpat1 598594 598598 TG_2 4
-hpat1 598600 598604 TT_2 4
-hpat1 598609 598613 TC_2 4
-hpat1 598614 598622 CTTC_2 8
-hpat1 598625 598629 AC_2 4
-hpat1 598638 598646 AGGT_2 8
-hpat1 598652 598658 ATT_2 6
-hpat1 598662 598666 TT_2 4
-hpat1 598690 598694 AG_2 4
-hpat1 598716 598720 CA_2 4
-hpat1 598731 598735 TG_2 4
-hpat1 598741 598745 GA_2 4
-hpat1 598781 598785 CA_2 4
-hpat1 598803 598807 AG_2 4
-hpat1 598810 598814 TG_2 4
-hpat1 598840 598844 AG_2 4
-hpat1 598844 598848 GA_2 4
-hpat1 598851 598855 GT_2 4
-hpat1 598855 598859 CA_2 4
-hpat1 598863 598867 GA_2 4
-hpat1 598871 598875 AG_2 4
-hpat1 598918 598922 AA_2 4
-hpat1 598932 598936 TC_2 4
-hpat1 598936 598940 AG_2 4
-hpat1 598944 598950 CTG_2 6
-hpat1 598952 598956 CA_2 4
-hpat1 598957 598961 CT_2 4
-hpat1 598966 598970 TG_2 4
-hpat1 598979 598987 TCCT_2 8
-hpat1 598995 599001 TGC_2 6
-hpat1 599031 599035 CT_2 4
-hpat1 599039 599043 GT_2 4
-hpat1 599045 599049 AG_2 4
-hpat1 599066 599070 CT_2 4
-hpat1 599077 599081 TT_2 4
-hpat1 599090 599096 TGC_2 6
-hpat1 599102 599108 TTG_2 6
-hpat1 599111 599117 TCA_2 6
-hpat1 599121 599125 AT_2 4
-hpat1 599131 599135 TT_2 4
-hpat1 599152 599156 TC_2 4
-hpat1 599165 599173 TCCC_2 8
-hpat1 599193 599197 AT_2 4
-hpat1 599216 599222 AT_3 6
-hpat1 599222 599228 GT_3 6
-hpat1 599231 599235 TA_2 4
-hpat1 599238 599242 TG_2 4
-hpat1 599255 599263 TG_4 8
-hpat1 599267 599271 TT_2 4
-hpat1 599276 599282 TA_3 6
-hpat1 599302 599306 TG_2 4
-hpat1 599316 599320 TT_2 4
-hpat1 599329 599333 AC_2 4
-hpat1 599335 599339 CT_2 4
-hpat1 599339 599343 GT_2 4
-hpat1 599374 599380 CTG_2 6
-hpat1 599393 599397 GT_2 4
-hpat1 599399 599403 GT_2 4
-hpat1 599404 599410 CCA_2 6
-hpat1 599412 599418 CCT_2 6
-hpat1 599435 599443 GATG_2 8
-hpat1 599466 599470 CC_2 4
-hpat1 599479 599483 TG_2 4
-hpat1 599494 599500 GT_3 6
-hpat1 599502 599506 CT_2 4
-hpat1 599517 599523 GT_3 6
-hpat1 599526 599530 TC_2 4
-hpat1 599538 599542 AC_2 4
-hpat1 599544 599548 GG_2 4
-hpat1 599559 599563 GG_2 4
-hpat1 599565 599571 GA_3 6
-hpat1 599571 599579 ATAC_2 8
-hpat1 599589 599593 CT_2 4
-hpat1 599619 599628 CAG_3 9
-hpat1 599645 599649 TC_2 4
-hpat1 599649 599653 CA_2 4
-hpat1 599693 599697 GA_2 4
-hpat1 599702 599708 GTT_2 6
-hpat1 599713 599717 TC_2 4
-hpat1 599719 599723 TG_2 4
-hpat1 599738 599742 GT_2 4
-hpat1 599746 599752 AAT_2 6
-hpat1 599758 599764 TTG_2 6
-hpat1 599809 599813 GA_2 4
-hpat1 599830 599834 GA_2 4
-hpat1 599836 599840 CC_2 4
-hpat1 599841 599845 TC_2 4
-hpat1 599850 599854 AA_2 4
-hpat1 599857 599861 AA_2 4
-hpat1 599872 599881 GTG_3 9
-hpat1 599902 599908 AGG_2 6
-hpat1 599917 599921 GA_2 4
-hpat1 599941 599945 AG_2 4
-hpat1 599958 599962 GA_2 4
-hpat1 599963 599967 CG_2 4
-hpat1 599991 599995 AG_2 4
-hpat1 600005 600025 TC_10 20
-hpat1 600025 600037 TA_6 12
-hpat1 600037 600041 CA_2 4
-hpat1 600041 600051 TA_5 10
-hpat1 600053 600061 TA_4 8
-hpat1 600063 600071 TA_4 8
-hpat1 600071 600075 TG_2 4
-hpat1 600075 600081 TA_3 6
-hpat1 600081 600085 TG_2 4
-hpat1 600085 600093 TA_4 8
-hpat1 600095 600099 TA_2 4
-hpat1 600101 600105 TG_2 4
-hpat1 600105 600115 TA_5 10
-hpat1 600117 600131 TA_7 14
-hpat1 600139 600145 TTG_2 6
-hpat1 600149 600157 AATG_2 8
-hpat1 600157 600161 AA_2 4
-hpat1 600168 600172 AC_2 4
-hpat1 600179 600183 CA_2 4
-hpat1 600220 600224 TA_2 4
-hpat1 600224 600230 TG_3 6
-hpat1 600236 600242 TG_3 6
-hpat1 600243 600249 AG_3 6
-hpat1 600253 600257 AT_2 4
-hpat1 600286 600290 AG_2 4
-hpat1 600290 600294 AA_2 4
-hpat1 600331 600335 TG_2 4
-hpat1 600349 600353 GT_2 4
-hpat1 600353 600357 AT_2 4
-hpat1 600358 600362 CA_2 4
-hpat1 600376 600380 GA_2 4
-hpat1 600385 600389 AA_2 4
-hpat1 600395 600403 TC_4 8
-hpat1 600425 600431 GCT_2 6
-hpat1 600440 600444 CA_2 4
-hpat1 600444 600448 GT_2 4
-hpat1 600485 600491 CCT_2 6
-hpat1 600504 600510 GT_3 6
-hpat1 600518 600522 CC_2 4
-hpat1 600543 600547 TG_2 4
-hpat1 600550 600554 AA_2 4
-hpat1 600556 600560 AT_2 4
-hpat1 600576 600580 TG_2 4
-hpat1 600623 600627 TC_2 4
-hpat1 600639 600643 CT_2 4
-hpat1 600643 600647 GG_2 4
-hpat1 600648 600654 CAG_2 6
-hpat1 600654 600660 CCA_2 6
-hpat1 600670 600674 AC_2 4
-hpat1 600684 600688 TG_2 4
-hpat1 600688 600696 GA_4 8
-hpat1 600729 600737 GCCA_2 8
-hpat1 600737 600745 AGTG_2 8
-hpat1 600747 600753 CCT_2 6
-hpat1 600757 600761 TG_2 4
-hpat1 600788 600792 TG_2 4
-hpat1 600792 600796 AA_2 4
-hpat1 600796 600802 AGA_2 6
-hpat1 600805 600811 ATA_2 6
-hpat1 600824 600830 AA_3 6
-hpat1 600831 600837 ATA_2 6
-hpat1 600837 600843 AAT_2 6
-hpat1 600853 600857 GC_2 4
-hpat1 600864 600868 CA_2 4
-hpat1 600886 600890 CA_2 4
-hpat1 600927 600931 GA_2 4
-hpat1 600950 600954 GA_2 4
-hpat1 600959 600963 TC_2 4
-hpat1 600964 600968 AA_2 4
-hpat1 600969 600977 AA_4 8
-hpat1 600979 600983 AA_2 4
-hpat1 600998 601002 CT_2 4
-hpat1 601012 601016 TG_2 4
-hpat1 601026 601030 CT_2 4
-hpat1 601042 601048 AGG_2 6
-hpat1 601090 601094 CA_2 4
-hpat1 601118 601122 AG_2 4
-hpat1 601132 601136 TC_2 4
-hpat1 601137 601141 AA_2 4
-hpat1 601141 601145 AC_2 4
-hpat1 601145 601149 AA_2 4
-hpat1 601157 601163 TGT_2 6
-hpat1 601180 601184 GT_2 4
-hpat1 601208 601212 AA_2 4
-hpat1 601223 601227 GG_2 4
-hpat1 601234 601238 CT_2 4
-hpat1 601245 601249 TT_2 4
-hpat1 601257 601265 CATA_2 8
-hpat1 601281 601285 TC_2 4
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-hpat1 626087 626091 AG_2 4
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-hpat1 626168 626172 GG_2 4
-hpat1 626172 626180 TG_4 8
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-hpat1 626226 626230 CC_2 4
-hpat1 626235 626239 CC_2 4
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-hpat1 626246 626250 AT_2 4
-hpat1 626253 626257 TT_2 4
-hpat1 626257 626263 CT_3 6
-hpat1 626268 626272 CC_2 4
-hpat1 626275 626279 CT_2 4
-hpat1 626300 626306 GCA_2 6
-hpat1 626318 626324 AGG_2 6
-hpat1 626350 626356 TCC_2 6
-hpat1 626356 626360 TA_2 4
-hpat1 626393 626397 CT_2 4
-hpat1 626429 626433 GG_2 4
-hpat1 626434 626438 AG_2 4
-hpat1 626450 626454 TC_2 4
-hpat1 626474 626478 CA_2 4
-hpat1 626483 626487 CG_2 4
-hpat1 626500 626504 AG_2 4
-hpat1 626515 626519 GA_2 4
-hpat1 626532 626536 GG_2 4
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-hpat1 626565 626569 GA_2 4
-hpat1 626581 626587 AG_3 6
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-hpat1 626615 626619 CT_2 4
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-hpat1 626627 626631 CT_2 4
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-hpat1 626638 626644 GAG_2 6
-hpat1 626649 626655 CTC_2 6
-hpat1 626655 626661 CCT_2 6
-hpat1 626687 626695 TAAA_2 8
-hpat1 626703 626707 AC_2 4
-hpat1 626707 626711 AG_2 4
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-hpat1 626726 626732 AGG_2 6
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-hpat1 626830 626838 TCTG_2 8
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-hpat1 626859 626865 GG_3 6
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-hpat1 626900 626906 AGG_2 6
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-hpat1 626920 626924 GG_2 4
-hpat1 626956 626964 TTGT_2 8
-hpat1 626970 626976 AA_3 6
-hpat1 626981 626985 AA_2 4
-hpat1 626996 627002 TGG_2 6
-hpat1 627010 627014 TG_2 4
hpat1 627029 627041 GAGGCT_2 12
-hpat1 627041 627047 GGA_2 6
-hpat1 627067 627071 GA_2 4
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-hpat1 627114 627120 AG_3 6
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-hpat1 627145 627153 AAAT_2 8
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-hpat1 627178 627182 CA_2 4
-hpat1 627183 627189 AAT_2 6
-hpat1 627200 627206 CGA_2 6
-hpat1 627212 627218 CAA_2 6
-hpat1 627239 627243 TT_2 4
-hpat1 627253 627259 CGG_2 6
-hpat1 627280 627286 ATC_2 6
-hpat1 627297 627306 ATC_3 9
-hpat1 627306 627314 CCTG_2 8
-hpat1 627348 627354 GCT_2 6
-hpat1 627366 627370 GG_2 4
-hpat1 627371 627379 CAGC_2 8
-hpat1 627379 627383 AG_2 4
-hpat1 627383 627391 CCTC_2 8
-hpat1 627392 627396 GG_2 4
-hpat1 627399 627405 CC_3 6
-hpat1 627423 627427 GG_2 4
-hpat1 627434 627438 GG_2 4
-hpat1 627450 627460 GG_5 10
-hpat1 627466 627470 GG_2 4
-hpat1 627482 627490 GG_4 8
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-hpat1 627515 627523 GG_4 8
-hpat1 627533 627537 GG_2 4
-hpat1 627549 627557 GG_4 8
-hpat1 627566 627570 GG_2 4
-hpat1 627582 627590 GG_4 8
-hpat1 627596 627600 GG_2 4
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-hpat1 627629 627633 GG_2 4
-hpat1 627645 627653 GG_4 8
-hpat1 627659 627663 GG_2 4
-hpat1 627665 627669 GG_2 4
-hpat1 627675 627683 GG_4 8
-hpat1 627692 627696 GG_2 4
-hpat1 627708 627716 GG_4 8
-hpat1 627726 627730 GG_2 4
-hpat1 627742 627750 GG_4 8
-hpat1 627759 627763 GG_2 4
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-hpat1 627850 627854 GG_2 4
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-hpat1 627883 627887 GG_2 4
-hpat1 627899 627907 GG_4 8
-hpat1 627917 627921 GG_2 4
-hpat1 627933 627941 GG_4 8
-hpat1 627950 627954 GG_2 4
-hpat1 627966 627974 GG_4 8
-hpat1 627980 627984 GG_2 4
-hpat1 627995 627999 TG_2 4
-hpat1 627999 628003 GG_2 4
-hpat1 628013 628017 GG_2 4
-hpat1 628029 628037 GG_4 8
-hpat1 628044 628048 GG_2 4
-hpat1 628050 628054 GG_2 4
-hpat1 628060 628068 GG_4 8
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-hpat1 628081 628085 GG_2 4
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-hpat1 628201 628205 GG_2 4
-hpat1 628217 628225 GG_4 8
-hpat1 628232 628236 GG_2 4
-hpat1 628248 628256 GG_4 8
-hpat1 628263 628267 GG_2 4
-hpat1 628278 628282 TG_2 4
-hpat1 628284 628290 GG_3 6
-hpat1 628296 628300 GG_2 4
-hpat1 628311 628315 TG_2 4
-hpat1 628315 628321 GG_3 6
-hpat1 628327 628331 GG_2 4
-hpat1 628342 628346 TG_2 4
-hpat1 628346 628354 GG_4 8
-hpat1 628356 628362 CAG_2 6
-hpat1 628376 628384 GG_4 8
-hpat1 628391 628395 GG_2 4
-hpat1 628407 628415 GG_4 8
-hpat1 628422 628426 GG_2 4
-hpat1 628437 628441 TG_2 4
-hpat1 628443 628449 GG_3 6
-hpat1 628455 628459 GG_2 4
-hpat1 628471 628479 GG_4 8
-hpat1 628485 628489 GG_2 4
-hpat1 628501 628509 GG_4 8
-hpat1 628516 628520 GG_2 4
-hpat1 628531 628535 TG_2 4
-hpat1 628535 628543 GG_4 8
-hpat1 628549 628553 GG_2 4
-hpat1 628565 628573 GG_4 8
-hpat1 628579 628583 GG_2 4
-hpat1 628595 628603 GG_4 8
-hpat1 628609 628613 GG_2 4
-hpat1 628631 628635 CC_2 4
-hpat1 628641 628645 CC_2 4
-hpat1 628659 628665 GGC_2 6
-hpat1 628672 628676 CT_2 4
-hpat1 628680 628684 GG_2 4
-hpat1 628685 628691 CG_3 6
-hpat1 628705 628709 AC_2 4
-hpat1 628715 628723 CGGG_2 8
-hpat1 628724 628730 GGC_2 6
-hpat1 628745 628751 GG_3 6
-hpat1 628754 628763 CGG_3 9
-hpat1 628764 628770 CG_3 6
-hpat1 628776 628780 GG_2 4
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-hpat1 628875 628881 GG_3 6
-hpat1 628889 628893 GG_2 4
-hpat1 628895 628899 GG_2 4
-hpat1 628900 628904 CG_2 4
-hpat1 628904 628912 AGGG_2 8
-hpat1 628914 628920 GC_3 6
-hpat1 628926 628932 CGG_2 6
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-hpat1 628974 628980 GCT_2 6
-hpat1 629036 629040 CT_2 4
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hpat1 629077 629092 TGA_5 15
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-hpat1 629192 629200 GTGC_2 8
-hpat1 629201 629207 TG_3 6
-hpat1 629214 629222 GGAT_2 8
-hpat1 629226 629236 CACCC_2 10
-hpat1 629263 629267 CC_2 4
-hpat1 629272 629280 TGCC_2 8
-hpat1 629310 629314 TC_2 4
-hpat1 629316 629320 GG_2 4
-hpat1 629423 629427 GG_2 4
-hpat1 629427 629435 TT_4 8
-hpat1 629442 629446 GG_2 4
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-hpat1 629465 629469 CT_2 4
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-hpat1 629483 629487 AA_2 4
-hpat1 629495 629503 CTTT_2 8
-hpat1 629514 629526 TCAT_3 12
-hpat1 629527 629531 CA_2 4
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-hpat1 629558 629566 CCAT_2 8
-hpat1 629566 629570 GA_2 4
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-hpat1 629617 629623 TCA_2 6
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-hpat1 629732 629738 AAG_2 6
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-hpat1 629802 629808 AAC_2 6
-hpat1 629815 629819 GA_2 4
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-hpat1 630004 630008 AC_2 4
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-hpat1 630179 630183 CA_2 4
-hpat1 630211 630215 AT_2 4
-hpat1 630216 630222 GGA_2 6
-hpat1 630242 630246 AA_2 4
-hpat1 630262 630266 TG_2 4
-hpat1 630274 630278 TC_2 4
-hpat1 630281 630285 AA_2 4
-hpat1 630286 630290 AA_2 4
-hpat1 630292 630298 AA_3 6
-hpat1 630306 630310 GT_2 4
-hpat1 630314 630322 AC_4 8
-hpat1 630340 630346 AGG_2 6
-hpat1 630353 630359 GGA_2 6
-hpat1 630424 630430 GGT_2 6
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-hpat1 630448 630458 AA_5 10
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-hpat1 630489 630493 GA_2 4
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-hpat1 630509 630515 GAA_2 6
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-hpat1 630539 630545 ATG_2 6
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-hpat1 630637 630645 GCAC_2 8
-hpat1 630662 630666 GG_2 4
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-hpat1 630679 630683 GA_2 4
-hpat1 630692 630696 CA_2 4
-hpat1 630701 630705 GC_2 4
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-hpat1 630713 630717 AA_2 4
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-hpat1 630885 630891 ATT_2 6
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-hpat1 630901 630905 AT_2 4
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-hpat1 630955 630959 AT_2 4
-hpat1 630981 630987 GGA_2 6
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-hpat1 631029 631033 AG_2 4
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-hpat1 631058 631062 AA_2 4
-hpat1 631064 631068 AA_2 4
-hpat1 631076 631080 GT_2 4
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-hpat1 631119 631125 AGG_2 6
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-hpat1 631200 631204 AA_2 4
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-hpat1 631222 631230 AACA_2 8
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-hpat1 631236 631240 AA_2 4
-hpat1 631245 631249 AT_2 4
-hpat1 631252 631258 TA_3 6
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-hpat1 631386 631392 CTA_2 6
-hpat1 631393 631405 AAC_4 12
-hpat1 631405 631409 AA_2 4
-hpat1 631414 631418 TG_2 4
-hpat1 631423 631427 AA_2 4
-hpat1 631428 631444 AA_8 16
-hpat1 631470 631478 GTGG_2 8
-hpat1 631496 631500 CA_2 4
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-hpat1 631539 631545 TT_3 6
-hpat1 631546 631550 GG_2 4
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-hpat1 631575 631583 CCAG_2 8
-hpat1 631597 631603 CTT_2 6
-hpat1 631603 631609 GGA_2 6
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-hpat1 631763 631767 CT_2 4
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-hpat1 631798 631802 CA_2 4
-hpat1 631809 631813 CT_2 4
-hpat1 631821 631825 AG_2 4
-hpat1 631837 631841 CG_2 4
-hpat1 631841 631845 GG_2 4
-hpat1 631848 631852 GA_2 4
-hpat1 631855 631859 GC_2 4
-hpat1 631862 631871 CTG_3 9
-hpat1 631873 631877 AG_2 4
-hpat1 631898 631904 CAG_2 6
-hpat1 631907 631911 AC_2 4
-hpat1 631916 631920 AA_2 4
-hpat1 631925 631931 CTC_2 6
-hpat1 631953 631957 CC_2 4
-hpat1 631979 631985 CCT_2 6
-hpat1 632009 632013 GC_2 4
-hpat1 632025 632031 TCT_2 6
-hpat1 632035 632041 AAG_2 6
-hpat1 632042 632046 AA_2 4
-hpat1 632046 632052 GTT_2 6
-hpat1 632054 632060 AGG_2 6
-hpat1 632075 632079 CT_2 4
-hpat1 632083 632093 CCAGC_2 10
-hpat1 632096 632100 CA_2 4
-hpat1 632100 632106 GGA_2 6
-hpat1 632113 632117 CA_2 4
-hpat1 632124 632128 GG_2 4
-hpat1 632128 632138 CACCT_2 10
-hpat1 632153 632157 GG_2 4
-hpat1 632158 632162 AC_2 4
-hpat1 632180 632186 GAA_2 6
-hpat1 632188 632192 CC_2 4
-hpat1 632192 632202 AGGGA_2 10
-hpat1 632218 632224 CA_3 6
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-hpat1 632270 632274 GG_2 4
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-hpat1 632442 632446 GG_2 4
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-hpat1 632502 632506 TG_2 4
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-hpat1 632533 632537 AC_2 4
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-hpat1 632699 632703 TC_2 4
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hpat1 632731 632743 GTGGGG_2 12
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-hpat1 632805 632809 CA_2 4
-hpat1 632809 632815 CC_3 6
-hpat1 632816 632826 TT_5 10
-hpat1 632826 632836 TAAAT_2 10
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-hpat1 633022 633026 TT_2 4
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-hpat1 633243 633251 GCCT_2 8
-hpat1 633253 633257 CT_2 4
-hpat1 633266 633270 CC_2 4
-hpat1 633275 633279 CT_2 4
-hpat1 633282 633286 TT_2 4
-hpat1 633292 633296 CC_2 4
-hpat1 633320 633324 CC_2 4
-hpat1 633328 633334 CAG_2 6
-hpat1 633342 633348 AGG_2 6
-hpat1 633353 633359 CTA_2 6
-hpat1 633377 633383 GA_3 6
-hpat1 633394 633398 CC_2 4
-hpat1 633399 633403 AC_2 4
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-hpat1 633487 633491 GG_2 4
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-hpat1 633513 633521 AAAT_2 8
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-hpat1 633702 633708 AAG_2 6
hpat1 633721 633733 ACTCTC_2 12
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-hpat1 642612 642616 GG_2 4
-hpat1 642617 642625 AAGT_2 8
-hpat1 642626 642632 GA_3 6
-hpat1 642632 642642 TTTCT_2 10
-hpat1 642647 642655 CTCA_2 8
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-hpat1 642700 642706 GAT_2 6
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-hpat1 642771 642783 AA_6 12
-hpat1 642814 642820 GCT_2 6
-hpat1 642862 642868 CAT_2 6
-hpat1 642872 642878 CAG_2 6
-hpat1 642880 642884 TT_2 4
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-hpat1 642898 642904 CCT_2 6
-hpat1 642913 642919 TGC_2 6
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-hpat1 642984 642988 AT_2 4
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-hpat1 643022 643026 TT_2 4
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-hpat1 643077 643081 CC_2 4
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-hpat1 643149 643153 TC_2 4
-hpat1 643161 643167 GAA_2 6
-hpat1 643168 643172 AG_2 4
-hpat1 643181 643189 TAGC_2 8
-hpat1 643193 643197 GG_2 4
-hpat1 643198 643202 CA_2 4
-hpat1 643203 643207 CT_2 4
-hpat1 643226 643230 CA_2 4
-hpat1 643230 643234 GA_2 4
-hpat1 643238 643248 GA_5 10
-hpat1 643277 643281 AT_2 4
-hpat1 643302 643306 GG_2 4
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-hpat1 643332 643338 CCA_2 6
-hpat1 643338 643346 TTAT_2 8
-hpat1 643346 643350 TA_2 4
-hpat1 643403 643413 GGCTA_2 10
-hpat1 643419 643423 GG_2 4
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-hpat1 643482 643488 GGA_2 6
-hpat1 643503 643509 AAT_2 6
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-hpat1 643528 643532 TA_2 4
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-hpat1 643621 643627 GGT_2 6
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-hpat1 643647 643651 TC_2 4
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-hpat1 643788 643792 GG_2 4
-hpat1 643794 643798 AG_2 4
-hpat1 643803 643811 ATGA_2 8
-hpat1 643816 643820 GT_2 4
-hpat1 643822 643826 TT_2 4
-hpat1 643826 643834 TCTT_2 8
-hpat1 643836 643840 GA_2 4
-hpat1 643845 643849 TC_2 4
-hpat1 643888 643892 AA_2 4
-hpat1 643899 643903 TT_2 4
-hpat1 643904 643908 AA_2 4
-hpat1 643919 643925 ATA_2 6
-hpat1 643942 643946 AG_2 4
-hpat1 643966 643970 AA_2 4
-hpat1 643998 644002 AT_2 4
-hpat1 644015 644021 AA_3 6
-hpat1 644026 644032 TGT_2 6
-hpat1 644032 644036 TA_2 4
-hpat1 644075 644079 GT_2 4
-hpat1 644081 644085 TA_2 4
-hpat1 644097 644101 TG_2 4
-hpat1 644115 644119 AT_2 4
-hpat1 644144 644148 GT_2 4
-hpat1 644154 644158 TG_2 4
-hpat1 644164 644170 CTC_2 6
-hpat1 644179 644183 TA_2 4
-hpat1 644185 644189 AA_2 4
-hpat1 644196 644204 AGAA_2 8
-hpat1 644216 644220 TG_2 4
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-hpat1 644241 644245 AA_2 4
-hpat1 644257 644261 AA_2 4
-hpat1 644262 644266 TT_2 4
-hpat1 644276 644280 AT_2 4
-hpat1 644290 644294 GA_2 4
-hpat1 644306 644310 GA_2 4
-hpat1 644312 644316 AC_2 4
-hpat1 644321 644325 TC_2 4
-hpat1 644331 644335 GA_2 4
-hpat1 644344 644350 TGA_2 6
-hpat1 644366 644372 CAG_2 6
-hpat1 644373 644377 AA_2 4
-hpat1 644385 644395 TTGAA_2 10
-hpat1 644395 644399 GG_2 4
-hpat1 644402 644406 GA_2 4
-hpat1 644418 644426 AGGA_2 8
-hpat1 644437 644443 CTT_2 6
-hpat1 644446 644450 TT_2 4
-hpat1 644463 644467 AG_2 4
-hpat1 644473 644477 CT_2 4
-hpat1 644488 644494 GAA_2 6
-hpat1 644512 644516 AG_2 4
-hpat1 644516 644522 ATC_2 6
-hpat1 644529 644533 TC_2 4
-hpat1 644542 644546 AA_2 4
-hpat1 644568 644574 CAG_2 6
-hpat1 644577 644581 AG_2 4
-hpat1 644584 644588 CT_2 4
-hpat1 644600 644606 GGA_2 6
-hpat1 644606 644610 AG_2 4
-hpat1 644616 644620 AG_2 4
-hpat1 644626 644630 GT_2 4
-hpat1 644630 644634 GG_2 4
-hpat1 644640 644644 AG_2 4
-hpat1 644670 644674 AG_2 4
-hpat1 644687 644696 ACC_3 9
-hpat1 644698 644702 AG_2 4
-hpat1 644707 644711 AG_2 4
-hpat1 644717 644726 ACC_3 9
-hpat1 644728 644732 TG_2 4
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-hpat1 644782 644786 AA_2 4
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-hpat1 644860 644866 TTC_2 6
-hpat1 644875 644879 TC_2 4
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-hpat1 644907 644911 TC_2 4
-hpat1 644920 644924 TT_2 4
-hpat1 644936 644944 CTTG_2 8
-hpat1 644948 644952 CA_2 4
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-hpat1 644976 644980 CC_2 4
-hpat1 644989 644993 CA_2 4
-hpat1 645000 645004 TC_2 4
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-hpat1 645024 645028 AC_2 4
-hpat1 645029 645035 TA_3 6
-hpat1 645037 645041 AA_2 4
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-hpat1 645086 645090 TT_2 4
-hpat1 645090 645094 GG_2 4
-hpat1 645109 645117 GAAT_2 8
-hpat1 645120 645124 TT_2 4
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-hpat1 645138 645142 TG_2 4
-hpat1 645150 645154 GG_2 4
-hpat1 645157 645161 GG_2 4
-hpat1 645176 645180 TA_2 4
-hpat1 645191 645195 TG_2 4
-hpat1 645196 645202 TCC_2 6
-hpat1 645202 645206 AA_2 4
-hpat1 645214 645218 AA_2 4
-hpat1 645224 645228 CC_2 4
-hpat1 645232 645238 ATG_2 6
-hpat1 645243 645249 AGG_2 6
-hpat1 645254 645258 TT_2 4
-hpat1 645278 645288 TTCAT_2 10
-hpat1 645291 645295 CA_2 4
-hpat1 645306 645310 TT_2 4
-hpat1 645315 645319 CA_2 4
-hpat1 645324 645328 GG_2 4
-hpat1 645329 645333 AG_2 4
-hpat1 645342 645352 TTCCT_2 10
-hpat1 645358 645362 AA_2 4
-hpat1 645366 645372 AGC_2 6
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-hpat1 645399 645403 CT_2 4
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-hpat1 645486 645490 CT_2 4
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-hpat1 645533 645539 GA_3 6
-hpat1 645539 645543 GG_2 4
-hpat1 645544 645548 GG_2 4
-hpat1 645566 645570 CA_2 4
-hpat1 645582 645586 AT_2 4
-hpat1 645594 645598 GA_2 4
-hpat1 645615 645623 CCTC_2 8
-hpat1 645650 645654 GA_2 4
-hpat1 645657 645661 AA_2 4
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-hpat1 645676 645680 TC_2 4
-hpat1 645683 645689 GCA_2 6
-hpat1 645736 645740 GA_2 4
-hpat1 645741 645749 ATGG_2 8
-hpat1 645750 645754 AG_2 4
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-hpat1 645821 645825 TT_2 4
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-hpat1 645845 645849 TG_2 4
-hpat1 645849 645855 CCA_2 6
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-hpat1 645864 645868 GA_2 4
-hpat1 645871 645875 GA_2 4
-hpat1 645879 645883 TA_2 4
-hpat1 645900 645906 CTG_2 6
-hpat1 645923 645929 ATG_2 6
-hpat1 645931 645935 GT_2 4
-hpat1 645941 645945 TC_2 4
-hpat1 645968 645977 ACC_3 9
-hpat1 645979 645983 CC_2 4
-hpat1 645994 645998 CT_2 4
-hpat1 645999 646005 CCA_2 6
-hpat1 646010 646014 TG_2 4
-hpat1 646016 646020 AG_2 4
-hpat1 646030 646034 TC_2 4
-hpat1 646038 646044 GCA_2 6
-hpat1 646054 646058 GG_2 4
-hpat1 646062 646066 GG_2 4
-hpat1 646068 646074 CAG_2 6
-hpat1 646093 646097 AC_2 4
-hpat1 646100 646104 TT_2 4
-hpat1 646106 646112 CAG_2 6
-hpat1 646115 646121 ATT_2 6
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-hpat1 646165 646169 TA_2 4
-hpat1 646180 646184 AG_2 4
-hpat1 646205 646209 AA_2 4
-hpat1 646243 646247 GT_2 4
-hpat1 646248 646252 TG_2 4
-hpat1 646252 646258 GGT_2 6
-hpat1 646266 646272 GCA_2 6
-hpat1 646284 646288 TC_2 4
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-hpat1 646357 646361 AA_2 4
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-hpat1 646382 646386 AA_2 4
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-hpat1 646467 646471 GA_2 4
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-hpat1 646515 646519 AA_2 4
-hpat1 646531 646537 TGG_2 6
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-hpat1 646594 646600 AGG_2 6
-hpat1 646623 646627 CA_2 4
-hpat1 646650 646654 GA_2 4
-hpat1 646659 646663 TC_2 4
-hpat1 646663 646681 AA_9 18
-hpat1 646684 646688 AA_2 4
-hpat1 646703 646709 GTG_2 6
-hpat1 646710 646714 CA_2 4
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-hpat1 646791 646795 GA_2 4
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-hpat1 646842 646852 AA_5 10
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-hpat1 646944 646950 GCT_2 6
-hpat1 646955 646959 AG_2 4
-hpat1 646961 646965 GT_2 4
-hpat1 646965 646975 GAAGG_2 10
-hpat1 647020 647024 AC_2 4
-hpat1 647024 647030 AGG_2 6
-hpat1 647040 647044 AG_2 4
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-hpat1 647049 647053 AG_2 4
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-hpat1 647219 647225 GAT_2 6
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-hpat1 647269 647273 CT_2 4
-hpat1 647274 647278 GG_2 4
-hpat1 647288 647292 TT_2 4
-hpat1 647324 647328 TT_2 4
-hpat1 647338 647346 CACT_2 8
-hpat1 647348 647352 AT_2 4
-hpat1 647358 647364 AT_3 6
-hpat1 647372 647376 AG_2 4
-hpat1 647381 647385 GG_2 4
-hpat1 647392 647396 GG_2 4
-hpat1 647401 647405 TA_2 4
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-hpat1 647430 647434 AC_2 4
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-hpat1 647442 647446 CA_2 4
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-hpat1 647458 647464 TGG_2 6
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-hpat1 647487 647491 TC_2 4
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-hpat1 647503 647507 CT_2 4
-hpat1 647518 647522 CA_2 4
-hpat1 647558 647566 TCAC_2 8
-hpat1 647569 647575 TTA_2 6
-hpat1 647581 647585 TT_2 4
-hpat1 647598 647604 GAG_2 6
-hpat1 647625 647629 GA_2 4
-hpat1 647653 647657 GG_2 4
-hpat1 647658 647664 TG_3 6
-hpat1 647669 647675 TGG_2 6
-hpat1 647698 647704 AG_3 6
-hpat1 647705 647709 AA_2 4
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-hpat1 647750 647754 TC_2 4
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-hpat1 647769 647773 CC_2 4
-hpat1 647774 647778 CC_2 4
-hpat1 647798 647802 AG_2 4
-hpat1 647830 647834 AT_2 4
-hpat1 647858 647864 CTG_2 6
-hpat1 647869 647873 GG_2 4
-hpat1 647880 647884 GG_2 4
-hpat1 647888 647892 GG_2 4
-hpat1 647909 647918 GGA_3 9
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-hpat1 647946 647950 AA_2 4
-hpat1 647956 647964 GCAT_2 8
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-hpat1 648028 648032 CC_2 4
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-hpat1 648040 648046 CCA_2 6
-hpat1 648098 648102 CC_2 4
-hpat1 648122 648126 CC_2 4
-hpat1 648126 648132 TGC_2 6
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-hpat1 648178 648182 AG_2 4
-hpat1 648190 648194 GA_2 4
-hpat1 648208 648212 CC_2 4
-hpat1 648215 648223 GCTG_2 8
-hpat1 648224 648228 AG_2 4
-hpat1 648232 648236 GG_2 4
-hpat1 648237 648241 AG_2 4
-hpat1 648243 648247 GT_2 4
-hpat1 648259 648263 GG_2 4
-hpat1 648275 648279 GC_2 4
-hpat1 648285 648291 GT_3 6
-hpat1 648315 648319 AA_2 4
-hpat1 648319 648323 GC_2 4
-hpat1 648326 648332 GGA_2 6
-hpat1 648338 648344 GGC_2 6
-hpat1 648347 648355 CGGG_2 8
-hpat1 648355 648363 TGGC_2 8
-hpat1 648370 648374 CC_2 4
-hpat1 648383 648387 GA_2 4
-hpat1 648406 648412 GA_3 6
-hpat1 648412 648416 GC_2 4
-hpat1 648423 648427 GG_2 4
-hpat1 648435 648439 AG_2 4
-hpat1 648440 648444 CC_2 4
-hpat1 648453 648457 GG_2 4
-hpat1 648478 648482 GG_2 4
-hpat1 648490 648499 GAA_3 9
-hpat1 648518 648522 AG_2 4
-hpat1 648523 648529 CTC_2 6
-hpat1 648529 648533 TC_2 4
-hpat1 648536 648542 GCC_2 6
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-hpat1 648571 648575 GG_2 4
-hpat1 648580 648584 CC_2 4
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-hpat1 648611 648617 CC_3 6
-hpat1 648638 648644 CC_3 6
-hpat1 648647 648651 TC_2 4
-hpat1 648655 648659 CC_2 4
-hpat1 648677 648681 CT_2 4
-hpat1 648683 648687 AG_2 4
-hpat1 648695 648699 TC_2 4
-hpat1 648701 648705 GA_2 4
-hpat1 648705 648709 CG_2 4
-hpat1 648709 648713 GG_2 4
-hpat1 648713 648721 TG_4 8
-hpat1 648723 648727 GG_2 4
-hpat1 648733 648737 CT_2 4
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-hpat1 648753 648757 CT_2 4
-hpat1 648790 648794 GG_2 4
-hpat1 648821 648825 AG_2 4
-hpat1 648834 648840 AAT_2 6
-hpat1 648846 648858 ATAA_3 12
-hpat1 648860 648864 AC_2 4
-hpat1 648864 648872 AAAT_2 8
-hpat1 648894 648898 GG_2 4
-hpat1 648927 648933 CC_3 6
-hpat1 648940 648948 AAGG_2 8
-hpat1 648953 648957 TG_2 4
-hpat1 648962 648966 GG_2 4
-hpat1 648968 648972 GG_2 4
-hpat1 648982 648986 AG_2 4
-hpat1 648991 648995 GG_2 4
-hpat1 649012 649016 TG_2 4
-hpat1 649027 649031 TG_2 4
-hpat1 649033 649037 GG_2 4
-hpat1 649038 649044 GA_3 6
-hpat1 649044 649048 GG_2 4
-hpat1 649056 649060 GG_2 4
-hpat1 649076 649080 CC_2 4
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hpat1 690131 690143 TTTCTT_2 12
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hpat1 694505 694517 CAGCCT_2 12
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hpat1 694902 694914 TATTTA_2 12
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hpat1 697066 697078 TGGGGG_2 12
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+hpat1 697567 697587 GTGT_5 20
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hpat1 698950 698962 AATTGA_2 12
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-hpat1 700316 700328 CATA_3 12
-hpat1 700328 700334 TG_3 6
-hpat1 700342 700346 CA_2 4
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-hpat1 700403 700407 AA_2 4
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-hpat1 700767 700771 TC_2 4
-hpat1 700777 700781 TT_2 4
-hpat1 700783 700787 AT_2 4
-hpat1 700805 700809 TT_2 4
-hpat1 700823 700829 TGG_2 6
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-hpat1 700849 700853 TG_2 4
-hpat1 700869 700875 CTT_2 6
-hpat1 700880 700884 TG_2 4
-hpat1 700888 700892 TA_2 4
-hpat1 700895 700899 TA_2 4
-hpat1 700903 700907 AT_2 4
-hpat1 700910 700914 AT_2 4
-hpat1 700914 700918 TC_2 4
-hpat1 700927 700931 TT_2 4
-hpat1 700938 700942 CT_2 4
-hpat1 700947 700951 GG_2 4
-hpat1 700960 700964 AC_2 4
-hpat1 700964 700970 AT_3 6
-hpat1 700974 700980 CTT_2 6
-hpat1 700983 700989 GTT_2 6
-hpat1 701004 701008 CT_2 4
-hpat1 701011 701017 TT_3 6
-hpat1 701020 701028 TTCT_2 8
-hpat1 701028 701032 TT_2 4
-hpat1 701032 701036 CT_2 4
+hpat1 699156 699171 TTT_5 15
diff -r 607620f93b4c -r db5523378e5c test-data/dibed_sample
--- a/test-data/dibed_sample Wed Jul 17 06:19:22 2024 +0000
+++ b/test-data/dibed_sample Wed Jul 17 07:40:00 2024 +0000
@@ -1,400 +1,17674 @@
+hpat1 74 76 GC_1 2
+hpat1 202 204 GC_1 2
+hpat1 306 308 GC_1 2
+hpat1 552 554 GC_1 2
+hpat1 558 560 GC_1 2
+hpat1 566 568 GC_1 2
+hpat1 574 576 GC_1 2
+hpat1 600 602 GC_1 2
+hpat1 626 628 GC_1 2
+hpat1 632 634 GC_1 2
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