Mercurial > repos > fubar > microsatbedfubar
comparison microsatbed.xml @ 14:9513e95d68f6 draft
planemo upload for repository https://github.com/fubar2/microsatbed commit bfb57ff3a931bc3f3d3549707f7bcf1f561c84c6-dirty
| author | fubar |
|---|---|
| date | Tue, 13 Aug 2024 06:56:25 +0000 |
| parents | b9a4e628599e |
| children | f9389aa84408 |
comparison
equal
deleted
inserted
replaced
| 13:b9a4e628599e | 14:9513e95d68f6 |
|---|---|
| 1 | 1 |
| 2 <tool id="microsatbedfubar" name="STR to bed" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> | 2 <tool id="microsatbed" name="STR to bed" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> |
| 3 <description>Short Tandem Repeats to bed features from fasta</description> | 3 <description>Short Tandem Repeats to bed features from fasta</description> |
| 4 <macros> | 4 <macros> |
| 5 <token name="@TOOL_VERSION@">1.3.2</token> | 5 <token name="@TOOL_VERSION@">1.3.2</token> |
| 6 <token name="@VERSION_SUFFIX@">0</token> | 6 <token name="@VERSION_SUFFIX@">0</token> |
| 7 <token name="@PYTHON_VERSION@">3.12.3</token> | 7 <token name="@PYTHON_VERSION@">3.12.3</token> |
| 116 <param name="tetramin" type="integer" min="2" value="2" label="Minimum repeats required for tetramers"/> | 116 <param name="tetramin" type="integer" min="2" value="2" label="Minimum repeats required for tetramers"/> |
| 117 <param name="pentamin" type="integer" min="2" value="2" label="Minimum repeats required for pentamers"/> | 117 <param name="pentamin" type="integer" min="2" value="2" label="Minimum repeats required for pentamers"/> |
| 118 <param name="hexamin" type="integer" min="2" value="2" label="Minimum repeats required for hexamers"/> | 118 <param name="hexamin" type="integer" min="2" value="2" label="Minimum repeats required for hexamers"/> |
| 119 </inputs> | 119 </inputs> |
| 120 <outputs> | 120 <outputs> |
| 121 <data name="bed" format="bed" label="STR output"> | 121 <data name="bed" format="bed" label="STR output from $on_string"> |
| 122 <change_format> | 122 <change_format> |
| 123 <when input="mode_cond.outformat" value="gff" format="gff"/> | 123 <when input="mode_cond.outformat" value="gff" format="gff"/> |
| 124 <when input="mode_cond.outformat" value="csv" format="csv"/> | 124 <when input="mode_cond.outformat" value="csv" format="csv"/> |
| 125 <when input="mode_cond.outformat" value="tsv" format="tabular"/> | 125 <when input="mode_cond.outformat" value="tsv" format="tabular"/> |
| 126 <when input="mode_cond.mode" value="ALLBW" format="bigwig"/> | 126 <when input="mode_cond.mode" value="ALLBW" format="bigwig"/> |