comparison test-data/builtinnativetsv_sample @ 7:f27be15cc58d draft

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author fubar
date Sun, 14 Jul 2024 23:34:26 +0000
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6:c5324bf8a52c 7:f27be15cc58d
1 hpat1 507 526 TTTA 4 5 20
2 hpat1 1963 1974 CCCCAC 6 2 12
3 hpat1 2146 2163 AAAAAC 6 3 18
4 hpat1 3236 3247 TTTTTT 6 2 12
5 hpat1 4117 4128 GGCAGG 6 2 12
6 hpat1 5472 5483 TTTTTG 6 2 12
7 hpat1 5584 5595 AGCCCC 6 2 12
8 hpat1 7239 7250 GAAAAA 6 2 12
9 hpat1 8173 8184 AAAAAA 6 2 12
10 hpat1 8275 8302 A 1 28 28
11 hpat1 8303 8314 GAGAGA 6 2 12
12 hpat1 8744 8755 GGAGGT 6 2 12
13 hpat1 8828 8845 AGAAAA 6 3 18
14 hpat1 9495 9506 GGAGGT 6 2 12
15 hpat1 9571 9595 AAAAC 5 5 25
16 hpat1 11623 11634 AGGGAA 6 2 12
17 hpat1 11651 11662 AACAAC 6 2 12
18 hpat1 12486 12497 CCTCTG 6 2 12
19 hpat1 13457 13468 ACCCTA 6 2 12
20 hpat1 13471 13488 CCCTAA 6 3 18
21 hpat1 13489 13500 CCCCAA 6 2 12
22 hpat1 13501 13518 CCCCAG 6 3 18
23 hpat1 13523 13546 AACCCT 6 4 24
24 hpat1 13559 13582 CCCTAA 6 4 24
25 hpat1 13598 13609 ACCCTA 6 2 12
26 hpat1 13612 13635 ACCCTA 6 4 24
27 hpat1 13641 13658 AACCCC 6 3 18
28 hpat1 13659 13670 AACCCT 6 2 12
29 hpat1 13691 13708 ACCCTC 6 3 18
30 hpat1 13721 13744 AACCCC 6 4 24
31 hpat1 13747 13758 CCCAAC 6 2 12
32 hpat1 13767 13778 CTCACC 6 2 12
33 hpat1 14149 14164 GCCC 4 4 16
34 hpat1 14307 14318 GGCGCA 6 2 12
35 hpat1 14336 14347 GGCGCA 6 2 12
36 hpat1 14384 14395 GGCGCA 6 2 12
37 hpat1 14472 14483 GGGGGG 6 2 12
38 hpat1 16148 16159 GAGTGG 6 2 12
39 hpat1 16547 16558 CTGAGG 6 2 12
40 hpat1 17030 17041 CAGGCA 6 2 12
41 hpat1 18072 18083 GTCTGG 6 2 12
42 hpat1 18120 18131 TCGTCC 6 2 12
43 hpat1 18795 18806 GCAGGC 6 2 12
44 hpat1 19207 19218 TGCTCC 6 2 12
45 hpat1 20148 20159 GGTGGT 6 2 12
46 hpat1 22835 22846 GGGAGG 6 2 12
47 hpat1 22939 22950 AAGCCA 6 2 12
48 hpat1 24658 24669 AAAAAA 6 2 12
49 hpat1 25690 25701 ATTCAC 6 2 12
50 hpat1 26499 26510 CCCCTG 6 2 12
51 hpat1 29330 29341 CCTCCA 6 2 12
52 hpat1 30089 30100 CCAGGA 6 2 12
53 hpat1 31904 31915 GTGTGT 6 2 12
54 hpat1 32448 32459 GGAGGT 6 2 12
55 hpat1 32998 33009 TTTTCT 6 2 12
56 hpat1 35194 35205 GCCCAG 6 2 12
57 hpat1 35991 36002 CTCTCC 6 2 12
58 hpat1 36299 36310 TCTCTG 6 2 12
59 hpat1 36311 36338 TC 2 14 28
60 hpat1 36363 36374 TCTCTC 6 2 12
61 hpat1 37142 37153 AAAAAA 6 2 12
62 hpat1 37229 37240 ACACAC 6 2 12
63 hpat1 38874 38885 AAAAAA 6 2 12
64 hpat1 39406 39417 CATGTG 6 2 12
65 hpat1 39489 39500 TTCTAG 6 2 12
66 hpat1 39620 39642 T 1 23 23
67 hpat1 40503 40514 GTACCA 6 2 12
68 hpat1 43740 43764 TCCAT 5 5 25
69 hpat1 43807 43826 CACTC 5 4 20
70 hpat1 43965 43984 TCCAC 5 4 20
71 hpat1 44879 44903 TTCCA 5 5 25
72 hpat1 45344 45368 TCCAT 5 5 25
73 hpat1 45526 45545 CATTC 5 4 20
74 hpat1 45554 45573 TCCAT 5 4 20
75 hpat1 46948 46967 TCCAT 5 4 20
76 hpat1 47107 47131 TTCCA 5 5 25
77 hpat1 47141 47160 ATTCC 5 4 20
78 hpat1 47303 47322 TCCAC 5 4 20
79 hpat1 48673 48692 TCCAT 5 4 20
80 hpat1 48806 48825 ATTCC 5 4 20
81 hpat1 49681 49700 ATTCC 5 4 20
82 hpat1 49856 49875 ATTCC 5 4 20
83 hpat1 50315 50334 TCCAC 5 4 20
84 hpat1 50775 50794 TCCAT 5 4 20
85 hpat1 51153 51172 ATTCC 5 4 20
86 hpat1 52508 52519 GCCTTT 6 2 12
87 hpat1 53676 53687 TTTCAG 6 2 12
88 hpat1 55005 55016 AAAAAC 6 2 12
89 hpat1 58746 58757 GCTTAT 6 2 12
90 hpat1 59055 59066 TAGAAA 6 2 12
91 hpat1 61658 61669 GGAGGT 6 2 12
92 hpat1 61733 61747 AAA 3 5 15
93 hpat1 62761 62775 AAA 3 5 15
94 hpat1 63859 63874 AAAG 4 4 16
95 hpat1 65522 65533 TTTTTT 6 2 12
96 hpat1 67692 67703 CTCAGA 6 2 12
97 hpat1 68526 68537 TGCCTC 6 2 12
98 hpat1 68608 68622 TTT 3 5 15
99 hpat1 68851 68862 CAGCCT 6 2 12
100 hpat1 69176 69187 CCTTAT 6 2 12
101 hpat1 72054 72065 CTCTCC 6 2 12
102 hpat1 73588 73599 CAAATA 6 2 12
103 hpat1 73891 73924 AC 2 17 34
104 hpat1 74873 74884 TCTCTT 6 2 12
105 hpat1 76181 76192 TTTGTT 6 2 12
106 hpat1 77091 77106 ATAC 4 4 16
107 hpat1 77427 77441 TTT 3 5 15
108 hpat1 78001 78015 TTT 3 5 15
109 hpat1 80746 80757 TTTTCA 6 2 12
110 hpat1 80794 80805 CTCTCT 6 2 12
111 hpat1 81769 81780 CAAAAA 6 2 12
112 hpat1 82355 82369 TTT 3 5 15
113 hpat1 83934 83945 TAAATG 6 2 12
114 hpat1 84620 84631 TCAAAA 6 2 12
115 hpat1 86960 86975 TATA 4 4 16
116 hpat1 87245 87256 TTTCTG 6 2 12
117 hpat1 87483 87494 TTTTCC 6 2 12
118 hpat1 87622 87641 TC 2 10 20
119 hpat1 87642 87653 TGTGTG 6 2 12
120 hpat1 87657 87684 GT 2 14 28
121 hpat1 90387 90401 AAA 3 5 15
122 hpat1 91598 91609 CTAGAA 6 2 12
123 hpat1 92664 92675 AAGAAA 6 2 12
124 hpat1 92820 92831 TCAATG 6 2 12
125 hpat1 93618 93629 AACAAA 6 2 12
126 hpat1 95760 95771 ATCAGT 6 2 12
127 hpat1 97920 97931 GTTTTT 6 2 12
128 hpat1 98028 98052 T 1 25 25
129 hpat1 98115 98126 ACCTCC 6 2 12
130 hpat1 100821 100832 CCTGCC 6 2 12
131 hpat1 100974 100985 CCCCAC 6 2 12
132 hpat1 102825 102836 GGAGTT 6 2 12
133 hpat1 103863 103874 CAGAAA 6 2 12
134 hpat1 104935 104946 CTATCT 6 2 12
135 hpat1 105272 105283 TTCTTT 6 2 12
136 hpat1 105982 105993 AAAAAA 6 2 12
137 hpat1 106336 106347 CATTAA 6 2 12
138 hpat1 108698 108709 AACACA 6 2 12
139 hpat1 109407 109421 TTT 3 5 15
140 hpat1 109461 109472 AAAACA 6 2 12
141 hpat1 109842 109853 AAACAA 6 2 12
142 hpat1 109891 109902 TTAAAT 6 2 12
143 hpat1 110331 110342 CAGCAA 6 2 12
144 hpat1 110481 110492 AAGAAG 6 2 12
145 hpat1 111086 111100 TTT 3 5 15
146 hpat1 111899 111910 CATGTG 6 2 12
147 hpat1 111999 112010 TTTTTT 6 2 12
148 hpat1 112079 112090 ACCTCC 6 2 12
149 hpat1 112760 112771 AGAAAG 6 2 12
150 hpat1 113453 113464 GAAAAA 6 2 12
151 hpat1 113543 113563 A 1 21 21
152 hpat1 113689 113700 ATGTGT 6 2 12
153 hpat1 113844 113855 TTTGTT 6 2 12
154 hpat1 119637 119648 TGGTAC 6 2 12
155 hpat1 120465 120476 CTAGAA 6 2 12
156 hpat1 120548 120559 CACATG 6 2 12
157 hpat1 121012 121035 AAAT 4 6 24
158 hpat1 124025 124048 TTGT 4 6 24
159 hpat1 124049 124066 TGT 3 6 18
160 hpat1 124223 124234 TTTTTA 6 2 12
161 hpat1 124605 124616 GAAAAA 6 2 12
162 hpat1 125716 125727 AAAATT 6 2 12
163 hpat1 125753 125764 CTAAAA 6 2 12
164 hpat1 125768 125779 CAAAAA 6 2 12
165 hpat1 125885 125896 TTTTTT 6 2 12
166 hpat1 125906 125923 TTT 3 6 18
167 hpat1 126103 126114 ACATAC 6 2 12
168 hpat1 127210 127221 TATATA 6 2 12
169 hpat1 128149 128164 TTTG 4 4 16
170 hpat1 128765 128776 GTATTT 6 2 12
171 hpat1 128861 128872 ATTTTC 6 2 12
172 hpat1 129323 129334 ACATAT 6 2 12
173 hpat1 130114 130125 GTGTTT 6 2 12
174 hpat1 131739 131750 TTTGTC 6 2 12
175 hpat1 131826 131837 TTCTGA 6 2 12
176 hpat1 132617 132628 AGGAAC 6 2 12
177 hpat1 134376 134387 AGATTT 6 2 12
178 hpat1 135238 135249 ACATAG 6 2 12
179 hpat1 135419 135430 CAACTT 6 2 12
180 hpat1 136414 136429 CACA 4 4 16
181 hpat1 136957 136968 AAAAAG 6 2 12
182 hpat1 137030 137041 AAAAAG 6 2 12
183 hpat1 137212 137223 GGAGAG 6 2 12
184 hpat1 137369 137380 AAACTA 6 2 12
185 hpat1 137535 137546 CAAATC 6 2 12
186 hpat1 137558 137575 AAA 3 6 18
187 hpat1 137727 137738 GAAGTC 6 2 12
188 hpat1 138896 138907 AAAAAA 6 2 12
189 hpat1 139228 139242 AAA 3 5 15
190 hpat1 140264 140275 TGTGTG 6 2 12
191 hpat1 140827 140838 TTTTAT 6 2 12
192 hpat1 141801 141812 TAATAT 6 2 12
193 hpat1 141988 141999 TGTGTG 6 2 12
194 hpat1 142002 142017 TATA 4 4 16
195 hpat1 143051 143072 TG 2 11 22
196 hpat1 144388 144399 AAAAAA 6 2 12
197 hpat1 144871 144888 TTG 3 6 18
198 hpat1 147608 147619 CTAGAA 6 2 12
199 hpat1 148148 148159 AAAAAA 6 2 12
200 hpat1 148417 148428 CTCCCT 6 2 12
201 hpat1 148859 148870 TAATAA 6 2 12
202 hpat1 150186 150217 AC 2 16 32
203 hpat1 152016 152027 AAAAAG 6 2 12
204 hpat1 152576 152587 TGTGTG 6 2 12
205 hpat1 155739 155750 AAGGCA 6 2 12
206 hpat1 156308 156325 TTTTAG 6 3 18
207 hpat1 157058 157073 TTTA 4 4 16
208 hpat1 158960 158971 ACCTAA 6 2 12
209 hpat1 159221 159232 TCCCAA 6 2 12
210 hpat1 160996 161007 GCTGCC 6 2 12
211 hpat1 166906 166925 AATAA 5 4 20
212 hpat1 168215 168240 AC 2 13 26
213 hpat1 168672 168683 ATTAAC 6 2 12
214 hpat1 168738 168767 GAAAA 5 6 30
215 hpat1 170405 170416 AAAAAC 6 2 12
216 hpat1 171678 171689 AACAAA 6 2 12
217 hpat1 171976 171987 AAATCA 6 2 12
218 hpat1 173024 173035 ATGGTG 6 2 12
219 hpat1 175792 175803 TTCTTT 6 2 12
220 hpat1 175804 175818 TTT 3 5 15
221 hpat1 176854 176868 TTT 3 5 15
222 hpat1 177755 177766 CTGCTT 6 2 12
223 hpat1 180030 180047 TTTTTG 6 3 18
224 hpat1 180499 180510 CCCACT 6 2 12
225 hpat1 180843 180854 ATTTGT 6 2 12
226 hpat1 180871 180902 GT 2 16 32
227 hpat1 183233 183244 AAATAA 6 2 12
228 hpat1 184102 184116 AAT 3 5 15
229 hpat1 184259 184282 T 1 24 24
230 hpat1 184344 184355 ACCTCC 6 2 12
231 hpat1 184870 184885 TCTC 4 4 16
232 hpat1 185111 185122 CCCAGG 6 2 12
233 hpat1 186379 186390 AGTGGG 6 2 12
234 hpat1 186480 186491 ATTCTT 6 2 12
235 hpat1 187054 187075 A 1 22 22
236 hpat1 188601 188612 TTCTTT 6 2 12
237 hpat1 191292 191303 AAAAAA 6 2 12
238 hpat1 192318 192329 AAAAAA 6 2 12
239 hpat1 192448 192463 TAAA 4 4 16
240 hpat1 195173 195184 TGAAAG 6 2 12
241 hpat1 198108 198131 T 1 24 24
242 hpat1 200074 200088 TTT 3 5 15
243 hpat1 202803 202814 ATATGT 6 2 12
244 hpat1 202815 202826 ATATAT 6 2 12
245 hpat1 202828 202863 TG 2 18 36
246 hpat1 202864 202883 TA 2 10 20
247 hpat1 203432 203447 TTTG 4 4 16
248 hpat1 203519 203530 ACCTCC 6 2 12
249 hpat1 206032 206043 ACAAAT 6 2 12
250 hpat1 206400 206419 AGGG 4 5 20
251 hpat1 206623 206666 GGAA 4 11 44
252 hpat1 211255 211266 CAGAAA 6 2 12
253 hpat1 213725 213736 AGATAA 6 2 12
254 hpat1 217138 217185 AAAT 4 12 48
255 hpat1 218421 218432 AAAAAT 6 2 12
256 hpat1 218898 218913 TAAA 4 4 16
257 hpat1 219257 219274 TTT 3 6 18
258 hpat1 222009 222020 AAAAAA 6 2 12
259 hpat1 222072 222093 T 1 22 22
260 hpat1 222157 222168 GCCTCC 6 2 12
261 hpat1 223960 223971 AAAAAA 6 2 12
262 hpat1 224548 224559 AACAAC 6 2 12
263 hpat1 225191 225208 AAA 3 6 18
264 hpat1 225402 225413 AATTAG 6 2 12
265 hpat1 225596 225613 AAA 3 6 18
266 hpat1 225617 225628 TGACTC 6 2 12
267 hpat1 226078 226089 CTGATT 6 2 12
268 hpat1 228565 228576 ATAAAA 6 2 12
269 hpat1 228923 228940 AAA 3 6 18
270 hpat1 230562 230591 TA 2 15 30
271 hpat1 230592 230619 GA 2 14 28
272 hpat1 232105 232124 CA 2 10 20
273 hpat1 232606 232629 AAAAAG 6 4 24
274 hpat1 232635 232682 AAGG 4 12 48
275 hpat1 233855 233869 AAA 3 5 15
276 hpat1 234129 234140 GGAGGT 6 2 12
277 hpat1 234204 234215 AAAAAA 6 2 12
278 hpat1 234534 234545 AAAAAA 6 2 12
279 hpat1 235842 235853 GGAGGT 6 2 12
280 hpat1 235922 235937 AAAT 4 4 16
281 hpat1 236235 236246 AAACAC 6 2 12
282 hpat1 236491 236502 TTCTCT 6 2 12
283 hpat1 237108 237147 AC 2 20 40
284 hpat1 237543 237558 AAAT 4 4 16
285 hpat1 237921 237932 GGAGGT 6 2 12
286 hpat1 237998 238009 AAAAAA 6 2 12
287 hpat1 239085 239099 TTT 3 5 15
288 hpat1 240473 240487 AAA 3 5 15
289 hpat1 240934 240959 AT 2 13 26
290 hpat1 241171 241182 ATATAT 6 2 12
291 hpat1 241668 241687 TTTTG 5 4 20
292 hpat1 242103 242118 AGAT 4 4 16
293 hpat1 242122 242161 AGAT 4 10 40
294 hpat1 243504 243515 GAGAGA 6 2 12
295 hpat1 246294 246329 TTTG 4 9 36
296 hpat1 246701 246712 TCCTCA 6 2 12
297 hpat1 247307 247324 AAA 3 6 18
298 hpat1 247883 247894 ATGTTC 6 2 12
299 hpat1 248587 248610 GT 2 12 24
300 hpat1 248613 248628 GTGT 4 4 16
301 hpat1 248666 248677 TGGCAG 6 2 12
302 hpat1 250106 250117 CTCAAT 6 2 12
303 hpat1 250129 250152 T 1 24 24
304 hpat1 250499 250510 AAGAAG 6 2 12
305 hpat1 250826 250837 CTCTAC 6 2 12
306 hpat1 250951 250970 TAAA 4 5 20
307 hpat1 252089 252100 CTCTCT 6 2 12
308 hpat1 252706 252717 ATAAAA 6 2 12
309 hpat1 252729 252740 AATAAT 6 2 12
310 hpat1 253241 253252 CATGTG 6 2 12
311 hpat1 254795 254809 TTT 3 5 15
312 hpat1 256098 256113 GGAG 4 4 16
313 hpat1 256152 256171 AGGG 4 5 20
314 hpat1 256552 256587 AC 2 18 36
315 hpat1 257215 257226 AAAAAA 6 2 12
316 hpat1 257470 257489 TTTTG 5 4 20
317 hpat1 259012 259047 AGGG 4 9 36
318 hpat1 259068 259079 AAAGAA 6 2 12
319 hpat1 259101 259116 AGAA 4 4 16
320 hpat1 262098 262109 GGGGTG 6 2 12
321 hpat1 262176 262187 TTCTTC 6 2 12
322 hpat1 262313 262324 AGGGGC 6 2 12
323 hpat1 264201 264224 GGAG 4 6 24
324 hpat1 264325 264348 GGAG 4 6 24
325 hpat1 264477 264496 GGAG 4 5 20
326 hpat1 264513 264536 GGAG 4 6 24
327 hpat1 264545 264564 GGAG 4 5 20
328 hpat1 264643 264658 GGGA 4 4 16
329 hpat1 264660 264675 GGAG 4 4 16
330 hpat1 264700 264715 GGAG 4 4 16
331 hpat1 265005 265016 GCCCCG 6 2 12
332 hpat1 265567 265584 AAT 3 6 18
333 hpat1 265803 265817 AAC 3 5 15
334 hpat1 265866 265877 TAACAA 6 2 12
335 hpat1 265931 265945 AAC 3 5 15
336 hpat1 265994 266005 TAACAA 6 2 12
337 hpat1 266186 266197 CTGGAA 6 2 12
338 hpat1 266759 266778 TAAA 4 5 20
339 hpat1 268395 268406 GGAGGT 6 2 12
340 hpat1 268907 268918 TTTTTT 6 2 12
341 hpat1 269912 269923 ATGGAC 6 2 12
342 hpat1 271171 271182 GATTTA 6 2 12
343 hpat1 271562 271573 TGAAAA 6 2 12
344 hpat1 272103 272114 AGAGAG 6 2 12
345 hpat1 272180 272191 AGGAAA 6 2 12
346 hpat1 272192 272209 AGAAAA 6 3 18
347 hpat1 273132 273143 TTACTG 6 2 12
348 hpat1 273507 273536 A 1 30 30
349 hpat1 273765 273794 TTTCTT 6 5 30
350 hpat1 273795 273815 T 1 21 21
351 hpat1 274215 274226 GAGCCT 6 2 12
352 hpat1 274597 274608 GCCTGA 6 2 12
353 hpat1 274850 274861 TGTTCT 6 2 12
354 hpat1 276183 276205 T 1 23 23
355 hpat1 277679 277690 ACACAC 6 2 12
356 hpat1 278427 278438 AAAAAA 6 2 12
357 hpat1 278575 278586 CCTAGT 6 2 12
358 hpat1 279697 279708 TTTTTG 6 2 12
359 hpat1 282294 282309 AAAG 4 4 16
360 hpat1 282512 282523 AAAAAT 6 2 12
361 hpat1 282752 282763 TTGCTT 6 2 12
362 hpat1 283102 283116 AAA 3 5 15
363 hpat1 283586 283597 GGCGGC 6 2 12
364 hpat1 283666 283677 CGGCGG 6 2 12
365 hpat1 286603 286614 TGACTC 6 2 12
366 hpat1 287369 287380 ACCTCC 6 2 12
367 hpat1 288276 288287 AGAAAC 6 2 12
368 hpat1 290125 290139 AAA 3 5 15
369 hpat1 291615 291630 TAAA 4 4 16
370 hpat1 291852 291863 TTTTTT 6 2 12
371 hpat1 292027 292038 TTTTTT 6 2 12
372 hpat1 292194 292209 TTTC 4 4 16
373 hpat1 292210 292227 TTT 3 6 18
374 hpat1 292583 292594 TTTTCT 6 2 12
375 hpat1 292663 292678 TTCC 4 4 16
376 hpat1 292687 292698 TCTTTC 6 2 12
377 hpat1 293586 293597 TTGAGG 6 2 12
378 hpat1 293663 293682 AAAAT 5 4 20
379 hpat1 294172 294183 TCTGCC 6 2 12
380 hpat1 296514 296531 TTT 3 6 18
381 hpat1 297142 297162 ATT 3 7 21
382 hpat1 298177 298196 CCTC 4 5 20
383 hpat1 298501 298512 TAATTT 6 2 12
384 hpat1 298885 298896 CATCCA 6 2 12
385 hpat1 299051 299062 TTTTTC 6 2 12
386 hpat1 299063 299077 TTT 3 5 15
387 hpat1 300065 300076 CCTCAA 6 2 12
388 hpat1 300704 300721 TTT 3 6 18
389 hpat1 300989 301004 TTTG 4 4 16
390 hpat1 301005 301016 TTTTTG 6 2 12
391 hpat1 301468 301479 CCACAC 6 2 12
392 hpat1 301529 301558 TAT 3 10 30
393 hpat1 302529 302540 TTTTTT 6 2 12
394 hpat1 303598 303609 AAAAAA 6 2 12
395 hpat1 303764 303775 AAAAAT 6 2 12
396 hpat1 304750 304761 AAAAAA 6 2 12
397 hpat1 305047 305058 AAAAAA 6 2 12
398 hpat1 305434 305467 CA 2 17 34
399 hpat1 306054 306065 AAAAAA 6 2 12
400 hpat1 306497 306508 TGTTGG 6 2 12
401 hpat1 307067 307078 AAAAAA 6 2 12
402 hpat1 307299 307310 CAGCTC 6 2 12
403 hpat1 308588 308607 TATT 4 5 20
404 hpat1 309049 309060 AGCAGC 6 2 12
405 hpat1 309969 309980 CCACCC 6 2 12
406 hpat1 311300 311311 GAGGGG 6 2 12
407 hpat1 311654 311665 CCCCCA 6 2 12
408 hpat1 312004 312015 GCGGCT 6 2 12
409 hpat1 312356 312373 GCC 3 6 18
410 hpat1 312410 312421 GAGGAG 6 2 12
411 hpat1 314011 314022 CCCTGT 6 2 12
412 hpat1 314319 314336 TTT 3 6 18
413 hpat1 314344 314355 AACAAC 6 2 12
414 hpat1 315088 315099 ATAATA 6 2 12
415 hpat1 315897 315908 CAGGCC 6 2 12
416 hpat1 317487 317498 AAAAAA 6 2 12
417 hpat1 319116 319127 TCTCTC 6 2 12
418 hpat1 321259 321276 TTTTGT 6 3 18
419 hpat1 321968 321985 TTC 3 6 18
420 hpat1 321986 322033 CTT 3 16 48
421 hpat1 322044 322055 TTCTTC 6 2 12
422 hpat1 322062 322073 TTCTTC 6 2 12
423 hpat1 322074 322085 CTCTTC 6 2 12
424 hpat1 322086 322100 TTC 3 5 15
425 hpat1 322102 322122 TCT 3 7 21
426 hpat1 322123 322140 CCT 3 6 18
427 hpat1 322154 322168 TTC 3 5 15
428 hpat1 323618 323641 TC 2 12 24
429 hpat1 323657 323672 AGAG 4 4 16
430 hpat1 323766 323777 ACCATC 6 2 12
431 hpat1 323846 323857 TCCCCC 6 2 12
432 hpat1 324349 324386 TG 2 19 38
433 hpat1 324773 324784 TTGTTG 6 2 12
434 hpat1 325310 325321 GGAGGT 6 2 12
435 hpat1 325761 325772 TTTTTT 6 2 12
436 hpat1 325922 325936 TTT 3 5 15
437 hpat1 325962 325977 TTTC 4 4 16
438 hpat1 325995 326018 TTCT 4 6 24
439 hpat1 326132 326143 GCCTCA 6 2 12
440 hpat1 326428 326439 ATAACA 6 2 12
441 hpat1 326882 326903 CA 2 11 22
442 hpat1 328252 328263 ATATGA 6 2 12
443 hpat1 328370 328401 T 1 32 32
444 hpat1 329377 329396 TC 2 10 20
445 hpat1 329866 329883 AAA 3 6 18
446 hpat1 330393 330404 CTTCCC 6 2 12
447 hpat1 331403 331414 CACACA 6 2 12
448 hpat1 331418 331445 AC 2 14 28
449 hpat1 331912 331923 AAAAAT 6 2 12
450 hpat1 331929 331940 AAAAAG 6 2 12
451 hpat1 332957 332968 GCCCCA 6 2 12
452 hpat1 333162 333173 CACCCC 6 2 12
453 hpat1 334123 334134 TTGTTG 6 2 12
454 hpat1 334268 334329 GT 2 31 62
455 hpat1 334655 334666 AAAAAA 6 2 12
456 hpat1 335468 335479 CTGCAG 6 2 12
457 hpat1 335608 335619 GGCCCT 6 2 12
458 hpat1 335804 335815 TTGTAT 6 2 12
459 hpat1 336042 336053 GAGGCT 6 2 12
460 hpat1 336279 336299 A 1 21 21
461 hpat1 336448 336474 A 1 27 27
462 hpat1 337163 337174 TAAAAA 6 2 12
463 hpat1 339091 339102 GGTGAG 6 2 12
464 hpat1 340801 340812 TTTTTT 6 2 12
465 hpat1 341153 341170 TTTTTA 6 3 18
466 hpat1 342133 342147 AAA 3 5 15
467 hpat1 343753 343764 GGAGGT 6 2 12
468 hpat1 344175 344186 AAAATT 6 2 12
469 hpat1 344342 344366 TTTTC 5 5 25
470 hpat1 344367 344384 TTT 3 6 18
471 hpat1 344599 344610 GGCCTC 6 2 12
472 hpat1 345784 345803 A 1 20 20
473 hpat1 347339 347350 ACACAG 6 2 12
474 hpat1 347894 347905 GGAGGT 6 2 12
475 hpat1 347972 347986 AAA 3 5 15
476 hpat1 348658 348673 AATG 4 4 16
477 hpat1 348739 348766 ATTT 4 7 28
478 hpat1 348822 348833 ACCTCT 6 2 12
479 hpat1 349404 349415 CCCCTG 6 2 12
480 hpat1 350549 350563 AAA 3 5 15
481 hpat1 351013 351024 CACATG 6 2 12
482 hpat1 351586 351606 T 1 21 21
483 hpat1 352174 352193 AAAG 4 5 20
484 hpat1 353018 353033 AAAC 4 4 16
485 hpat1 353654 353665 TCTCTC 6 2 12
486 hpat1 354071 354088 TTT 3 6 18
487 hpat1 355441 355464 A 1 24 24
488 hpat1 356742 356753 AGATGG 6 2 12
489 hpat1 357237 357248 AATTCA 6 2 12
490 hpat1 357793 357804 CCACCC 6 2 12
491 hpat1 358582 358593 GTGAGA 6 2 12
492 hpat1 359129 359148 AAAAG 5 4 20
493 hpat1 359151 359166 GGAA 4 4 16
494 hpat1 359807 359826 TTAT 4 5 20
495 hpat1 360492 360506 AAC 3 5 15
496 hpat1 360640 360651 AGAGCA 6 2 12
497 hpat1 360676 360687 AACAAC 6 2 12
498 hpat1 360993 361004 AAAGAA 6 2 12
499 hpat1 361816 361831 AAAC 4 4 16
500 hpat1 362642 362653 CTCTTC 6 2 12
501 hpat1 362938 362952 TTT 3 5 15
502 hpat1 363151 363162 GATCTT 6 2 12
503 hpat1 363465 363479 TTT 3 5 15
504 hpat1 364493 364507 TTT 3 5 15
505 hpat1 365380 365391 GGAGGT 6 2 12
506 hpat1 366470 366484 AAA 3 5 15
507 hpat1 367830 367841 GGGGTG 6 2 12
508 hpat1 367885 367914 TG 2 15 30
509 hpat1 367918 367929 GCGCGC 6 2 12
510 hpat1 369146 369157 ACACAC 6 2 12
511 hpat1 369223 369234 TTGTTT 6 2 12
512 hpat1 370082 370093 ATTAGG 6 2 12
513 hpat1 370892 370903 TTATTT 6 2 12
514 hpat1 371203 371217 TTT 3 5 15
515 hpat1 371649 371663 TTT 3 5 15
516 hpat1 372440 372451 ACCTCC 6 2 12
517 hpat1 373342 373356 AAA 3 5 15
518 hpat1 373851 373862 GTTGGA 6 2 12
519 hpat1 376041 376052 GGAGGT 6 2 12
520 hpat1 376789 376815 A 1 27 27
521 hpat1 377249 377260 CCTGAG 6 2 12
522 hpat1 377813 377824 AAAAAA 6 2 12
523 hpat1 378349 378360 TTTTTT 6 2 12
524 hpat1 379129 379140 TTTTTT 6 2 12
525 hpat1 379796 379807 TTTTCT 6 2 12
526 hpat1 379824 379838 TTT 3 5 15
527 hpat1 379902 379913 ACCTCC 6 2 12
528 hpat1 380591 380602 AAAAAA 6 2 12
529 hpat1 380955 380969 TTT 3 5 15
530 hpat1 384331 384342 AAAAAA 6 2 12
531 hpat1 384768 384779 TTTTGT 6 2 12
532 hpat1 384884 384895 CTTCTG 6 2 12
533 hpat1 386748 386759 CTGCAG 6 2 12
534 hpat1 387480 387494 AAA 3 5 15
535 hpat1 387951 387962 TGGGGG 6 2 12
536 hpat1 388197 388208 GGAGGT 6 2 12
537 hpat1 388272 388298 A 1 27 27
538 hpat1 390061 390072 AATATA 6 2 12
539 hpat1 390511 390522 AAAAAA 6 2 12
540 hpat1 390939 390974 CA 2 18 36
541 hpat1 391213 391224 AACAAC 6 2 12
542 hpat1 391730 391741 TTTTTT 6 2 12
543 hpat1 392496 392516 A 1 21 21
544 hpat1 393018 393029 GGCAGG 6 2 12
545 hpat1 393263 393274 TGGAGC 6 2 12
546 hpat1 393714 393725 GCTCCT 6 2 12
547 hpat1 393907 393918 GCCCCG 6 2 12
548 hpat1 394078 394089 CCGCCG 6 2 12
549 hpat1 394172 394183 CACTTT 6 2 12
550 hpat1 395341 395352 TTTTTT 6 2 12
551 hpat1 395519 395530 TGGGAA 6 2 12
552 hpat1 396741 396756 TTTA 4 4 16
553 hpat1 398200 398211 TTTTTT 6 2 12
554 hpat1 399192 399203 AACAAC 6 2 12
555 hpat1 399363 399374 TTTCCT 6 2 12
556 hpat1 399446 399457 ACTGGC 6 2 12
557 hpat1 399792 399806 AAA 3 5 15
558 hpat1 399965 399976 AAAAAA 6 2 12
559 hpat1 401245 401256 AAAAAC 6 2 12
560 hpat1 402032 402049 TTT 3 6 18
561 hpat1 403273 403300 TG 2 14 28
562 hpat1 405046 405057 GACCCT 6 2 12
563 hpat1 406470 406481 CCACCT 6 2 12
564 hpat1 406635 406646 CCCCCA 6 2 12
565 hpat1 406676 406687 CCCCAT 6 2 12
566 hpat1 406729 406740 CCCCCA 6 2 12
567 hpat1 406946 406957 AGCAGC 6 2 12
568 hpat1 408399 408410 TTTTTT 6 2 12
569 hpat1 409295 409306 CGGAGG 6 2 12
570 hpat1 409374 409389 ATAT 4 4 16
571 hpat1 411079 411090 TTTTTT 6 2 12
572 hpat1 411698 411715 TTT 3 6 18
573 hpat1 411778 411789 ACCTCC 6 2 12
574 hpat1 412137 412148 ATTTTT 6 2 12
575 hpat1 412888 412917 T 1 30 30
576 hpat1 413750 413761 CCCAGC 6 2 12
577 hpat1 415300 415314 TTT 3 5 15
578 hpat1 415761 415772 CAGAGG 6 2 12
579 hpat1 416538 416549 CCACAT 6 2 12
580 hpat1 418814 418825 CAGGGG 6 2 12
581 hpat1 422182 422193 GAAACA 6 2 12
582 hpat1 423212 423223 AAATAA 6 2 12
583 hpat1 424001 424012 GTCTAG 6 2 12
584 hpat1 424336 424347 GCCCAG 6 2 12
585 hpat1 424668 424679 CAGCTG 6 2 12
586 hpat1 425324 425335 GTCACA 6 2 12
587 hpat1 425542 425553 CTACTC 6 2 12
588 hpat1 427055 427066 TGAGGC 6 2 12
589 hpat1 428931 428942 GAGGCA 6 2 12
590 hpat1 429287 429298 ATAAAA 6 2 12
591 hpat1 430039 430050 ACACAC 6 2 12
592 hpat1 430204 430218 AAA 3 5 15
593 hpat1 430892 430903 AAAAAC 6 2 12
594 hpat1 433017 433040 T 1 24 24
595 hpat1 433197 433214 TTT 3 6 18
596 hpat1 433986 433997 CATTGA 6 2 12
597 hpat1 434454 434465 GTTGTT 6 2 12
598 hpat1 434763 434777 AAA 3 5 15
599 hpat1 434915 434932 TTT 3 6 18
600 hpat1 435226 435243 TTT 3 6 18
601 hpat1 435358 435377 A 1 20 20
602 hpat1 436225 436239 TTT 3 5 15
603 hpat1 436387 436401 TTT 3 5 15
604 hpat1 436833 436848 AAAT 4 4 16
605 hpat1 437626 437645 AAAT 4 5 20
606 hpat1 438925 438936 AAAAAC 6 2 12
607 hpat1 439225 439262 A 1 38 38
608 hpat1 439559 439573 AAC 3 5 15
609 hpat1 439615 439637 T 1 23 23
610 hpat1 439700 439711 ACCTCC 6 2 12
611 hpat1 440311 440325 AAA 3 5 15
612 hpat1 440725 440748 ATT 3 8 24
613 hpat1 440749 440760 TTATTT 6 2 12
614 hpat1 442019 442036 AAAATA 6 3 18
615 hpat1 442318 442329 CAAAAA 6 2 12
616 hpat1 442719 442730 ACCTCC 6 2 12
617 hpat1 443008 443022 TTT 3 5 15
618 hpat1 443088 443099 ACCTCC 6 2 12
619 hpat1 443320 443335 TTTA 4 4 16
620 hpat1 444386 444400 TTT 3 5 15
621 hpat1 445705 445716 TTATTT 6 2 12
622 hpat1 445717 445732 ATTT 4 4 16
623 hpat1 446505 446519 AAA 3 5 15
624 hpat1 446850 446861 AACAAA 6 2 12
625 hpat1 447436 447447 TTATTA 6 2 12
626 hpat1 448341 448352 CTGCCC 6 2 12
627 hpat1 448561 448572 TCGGCA 6 2 12
628 hpat1 449223 449234 ATTGTG 6 2 12
629 hpat1 449770 449781 TTTTTT 6 2 12
630 hpat1 451023 451034 TTTGTT 6 2 12
631 hpat1 451475 451490 TGTA 4 4 16
632 hpat1 452085 452108 A 1 24 24
633 hpat1 452536 452547 ATCAGC 6 2 12
634 hpat1 452702 452727 TA 2 13 26
635 hpat1 453077 453091 TTT 3 5 15
636 hpat1 453851 453862 AAAAAT 6 2 12
637 hpat1 453964 453975 CAGATA 6 2 12
638 hpat1 455184 455195 ATTTAA 6 2 12
639 hpat1 458294 458305 CTGTTG 6 2 12
640 hpat1 459372 459383 AGTCTC 6 2 12
641 hpat1 459470 459481 CCTGCC 6 2 12
642 hpat1 461444 461455 GGAGGT 6 2 12
643 hpat1 461519 461533 AAA 3 5 15
644 hpat1 462041 462052 AGACTA 6 2 12
645 hpat1 462062 462073 CAAAAG 6 2 12
646 hpat1 463723 463734 ACCCAG 6 2 12
647 hpat1 463956 463975 AAACA 5 4 20
648 hpat1 464056 464067 GCATTT 6 2 12
649 hpat1 464824 464843 A 1 20 20
650 hpat1 466294 466317 TG 2 12 24
651 hpat1 466327 466338 GTGTGT 6 2 12
652 hpat1 467570 467581 TTTTTT 6 2 12
653 hpat1 468461 468472 ACACAC 6 2 12
654 hpat1 469650 469661 TGGGAA 6 2 12
655 hpat1 470754 470779 TG 2 13 26
656 hpat1 471054 471065 GGAGGC 6 2 12
657 hpat1 471128 471165 A 1 38 38
658 hpat1 471166 471221 TA 2 28 56
659 hpat1 471298 471309 TCTCAC 6 2 12
660 hpat1 471602 471613 TTGGAG 6 2 12
661 hpat1 472084 472095 TACACA 6 2 12
662 hpat1 474126 474140 TTT 3 5 15
663 hpat1 476040 476051 TTAAAA 6 2 12
664 hpat1 476070 476081 TCAAAA 6 2 12
665 hpat1 476120 476131 TTTTTT 6 2 12
666 hpat1 476421 476435 TTT 3 5 15
667 hpat1 476497 476511 TTT 3 5 15
668 hpat1 476790 476804 TTT 3 5 15
669 hpat1 476979 476996 AAA 3 6 18
670 hpat1 478010 478033 AAAACA 6 4 24
671 hpat1 478269 478280 TTTTTT 6 2 12
672 hpat1 479363 479374 CCACTG 6 2 12
673 hpat1 480111 480131 T 1 21 21
674 hpat1 480195 480206 CCTCCG 6 2 12
675 hpat1 481379 481390 AAACAG 6 2 12
676 hpat1 484422 484443 T 1 22 22
677 hpat1 484767 484778 TTTTAC 6 2 12
678 hpat1 485404 485415 AACAAA 6 2 12
679 hpat1 485646 485657 CATCGG 6 2 12
680 hpat1 486045 486062 AAA 3 6 18
681 hpat1 486722 486743 T 1 22 22
682 hpat1 487157 487168 TTTTTT 6 2 12
683 hpat1 489258 489269 TCTCAT 6 2 12
684 hpat1 490266 490283 AAAACA 6 3 18
685 hpat1 490694 490705 TCAGCT 6 2 12
686 hpat1 491439 491462 T 1 24 24
687 hpat1 491755 491766 TTTTTT 6 2 12
688 hpat1 491956 491977 T 1 22 22
689 hpat1 492607 492618 CCTGCC 6 2 12
690 hpat1 493273 493284 GGAGGC 6 2 12
691 hpat1 493346 493357 CACACA 6 2 12
692 hpat1 496259 496273 TTT 3 5 15
693 hpat1 497786 497813 AC 2 14 28
694 hpat1 498279 498290 TTCTTC 6 2 12
695 hpat1 498874 498885 TATTTC 6 2 12
696 hpat1 498952 498963 CACACA 6 2 12
697 hpat1 499113 499124 AGGTGT 6 2 12
698 hpat1 500427 500446 AAAC 4 5 20
699 hpat1 500448 500459 AAAAAC 6 2 12
700 hpat1 500768 500779 CAGCCT 6 2 12
701 hpat1 501705 501716 CACACA 6 2 12
702 hpat1 501890 501901 AAATGA 6 2 12
703 hpat1 504615 504626 TATTTT 6 2 12
704 hpat1 504795 504814 T 1 20 20
705 hpat1 505013 505033 T 1 21 21
706 hpat1 505628 505639 AAACAA 6 2 12
707 hpat1 506288 506299 AAAGAC 6 2 12
708 hpat1 507516 507527 AGTAAC 6 2 12
709 hpat1 508773 508788 TTTA 4 4 16
710 hpat1 509939 509961 A 1 23 23
711 hpat1 510502 510519 AAA 3 6 18
712 hpat1 510633 510647 AAC 3 5 15
713 hpat1 510704 510715 GAGGCT 6 2 12
714 hpat1 510735 510746 GGAGGT 6 2 12
715 hpat1 510788 510808 A 1 21 21
716 hpat1 511425 511436 ATAAAA 6 2 12
717 hpat1 511729 511743 AAA 3 5 15
718 hpat1 511755 511766 AATAAT 6 2 12
719 hpat1 511915 511936 A 1 22 22
720 hpat1 513045 513060 GAGA 4 4 16
721 hpat1 513078 513121 AG 2 22 44
722 hpat1 513354 513365 AAAAAC 6 2 12
723 hpat1 514714 514725 TTTTGT 6 2 12
724 hpat1 515269 515283 TTT 3 5 15
725 hpat1 516547 516561 TTT 3 5 15
726 hpat1 517637 517648 CATGTA 6 2 12
727 hpat1 518248 518259 TTTTTT 6 2 12
728 hpat1 518408 518428 T 1 21 21
729 hpat1 518943 518954 AAAAAC 6 2 12
730 hpat1 519163 519174 TGTTTT 6 2 12
731 hpat1 519687 519702 ATAC 4 4 16
732 hpat1 520951 520965 AAA 3 5 15
733 hpat1 521038 521049 GGAGGT 6 2 12
734 hpat1 521113 521144 A 1 32 32
735 hpat1 521818 521835 AAA 3 6 18
736 hpat1 522338 522349 GAAAAT 6 2 12
737 hpat1 524042 524056 TTT 3 5 15
738 hpat1 526369 526380 TTCACA 6 2 12
739 hpat1 527826 527837 TTTTTA 6 2 12
740 hpat1 528955 528966 CCTGAC 6 2 12
741 hpat1 529165 529176 AACTCC 6 2 12
742 hpat1 529760 529771 AGCGGC 6 2 12
743 hpat1 532566 532585 CT 2 10 20
744 hpat1 532765 532779 TAT 3 5 15
745 hpat1 534656 534681 T 1 26 26
746 hpat1 535074 535085 TTTTAT 6 2 12
747 hpat1 535729 535744 GAAA 4 4 16
748 hpat1 535746 535773 AAAG 4 7 28
749 hpat1 535782 535793 AGAGAG 6 2 12
750 hpat1 536150 536161 TTTAGT 6 2 12
751 hpat1 538740 538751 AAATAT 6 2 12
752 hpat1 538773 538792 AAGG 4 5 20
753 hpat1 538800 538811 TTTTTT 6 2 12
754 hpat1 539339 539350 GGAGGT 6 2 12
755 hpat1 539414 539433 A 1 20 20
756 hpat1 540074 540085 AAAAAA 6 2 12
757 hpat1 540498 540509 TGTTTT 6 2 12
758 hpat1 541889 541900 AACAAC 6 2 12
759 hpat1 542948 542959 AAAAAA 6 2 12
760 hpat1 542960 542975 ATAT 4 4 16
761 hpat1 543137 543148 CAACAA 6 2 12
762 hpat1 543959 543970 GGAGGT 6 2 12
763 hpat1 544033 544050 AAAAAC 6 3 18
764 hpat1 544054 544068 ACC 3 5 15
765 hpat1 544522 544533 TTGCTG 6 2 12
766 hpat1 544658 544669 TTTTTT 6 2 12
767 hpat1 546135 546146 CAAAAA 6 2 12
768 hpat1 546382 546393 TTTTTC 6 2 12
769 hpat1 546493 546504 AGCCTC 6 2 12
770 hpat1 547434 547445 AAATAA 6 2 12
771 hpat1 549626 549637 GAGAGG 6 2 12
772 hpat1 550639 550658 TGTT 4 5 20
773 hpat1 550723 550734 ACCTCC 6 2 12
774 hpat1 551639 551650 TTTTAT 6 2 12
775 hpat1 552257 552280 AAAAAT 6 4 24
776 hpat1 552764 552781 TTA 3 6 18
777 hpat1 552848 552859 ACCTCC 6 2 12
778 hpat1 556060 556071 GGTTTT 6 2 12
779 hpat1 556296 556310 TTT 3 5 15
780 hpat1 556975 557006 AAAT 4 8 32
781 hpat1 557124 557138 TTT 3 5 15
782 hpat1 558010 558021 TGGCTC 6 2 12
783 hpat1 558471 558482 GATCTG 6 2 12
784 hpat1 562681 562692 CTGTAA 6 2 12
785 hpat1 562697 562708 TTTTCT 6 2 12
786 hpat1 563925 563936 GAGGCT 6 2 12
787 hpat1 564030 564044 AAA 3 5 15
788 hpat1 564727 564758 AC 2 16 32
789 hpat1 565343 565354 CATGTG 6 2 12
790 hpat1 565426 565437 TTCTAG 6 2 12
791 hpat1 566572 566583 AGGAGA 6 2 12
792 hpat1 566984 566995 AAAACA 6 2 12
793 hpat1 568068 568091 T 1 24 24
794 hpat1 569331 569342 GGAGGT 6 2 12
795 hpat1 569405 569416 AAAAAT 6 2 12
796 hpat1 570032 570043 TTTTTT 6 2 12
797 hpat1 570541 570558 AAT 3 6 18
798 hpat1 571280 571291 TGTATA 6 2 12
799 hpat1 571318 571333 TGTG 4 4 16
800 hpat1 571613 571633 T 1 21 21
801 hpat1 572152 572163 TTATTA 6 2 12
802 hpat1 573516 573530 TTG 3 5 15
803 hpat1 573851 573862 TTTTTT 6 2 12
804 hpat1 575452 575471 AATTA 5 4 20
805 hpat1 575472 575483 AATTTT 6 2 12
806 hpat1 575669 575680 ATTTTT 6 2 12
807 hpat1 575802 575813 ATTTTT 6 2 12
808 hpat1 575871 575894 AC 2 12 24
809 hpat1 577212 577226 TTT 3 5 15
810 hpat1 577377 577388 TTTGTA 6 2 12
811 hpat1 578002 578013 CCTTTC 6 2 12
812 hpat1 578512 578523 TTTTTT 6 2 12
813 hpat1 578671 578702 TA 2 16 32
814 hpat1 578703 578717 TTT 3 5 15
815 hpat1 578849 578866 TTT 3 6 18
816 hpat1 579478 579489 AGAGAG 6 2 12
817 hpat1 579493 579504 GGGTCT 6 2 12
818 hpat1 580201 580220 A 1 20 20
819 hpat1 580329 580340 TTTTTA 6 2 12
820 hpat1 580420 580431 ACCTCC 6 2 12
821 hpat1 580977 580988 AAAAAA 6 2 12
822 hpat1 581225 581242 TTA 3 6 18
823 hpat1 581452 581463 CAGGGG 6 2 12
824 hpat1 581509 581520 GGGTGG 6 2 12
825 hpat1 582118 582141 AAAACA 6 4 24
826 hpat1 583541 583556 TGTA 4 4 16
827 hpat1 584746 584763 TTT 3 6 18
828 hpat1 585485 585496 GAGGCT 6 2 12
829 hpat1 587188 587199 GGAGGT 6 2 12
830 hpat1 587261 587275 AAA 3 5 15
831 hpat1 588890 588901 CAGCCC 6 2 12
832 hpat1 589708 589719 CCCCAC 6 2 12
833 hpat1 589883 589894 CACACT 6 2 12
834 hpat1 591642 591653 CCAGGT 6 2 12
835 hpat1 591776 591787 GGGCTT 6 2 12
836 hpat1 591897 591908 CAGGGA 6 2 12
837 hpat1 592321 592332 GGAGGC 6 2 12
838 hpat1 592395 592412 AAA 3 6 18
839 hpat1 593794 593805 TCATCT 6 2 12
840 hpat1 595349 595360 CGGCGG 6 2 12
841 hpat1 595567 595578 TCCCGC 6 2 12
842 hpat1 595602 595613 CACCAC 6 2 12
843 hpat1 595622 595636 CGC 3 5 15
844 hpat1 595738 595749 TCCTCG 6 2 12
845 hpat1 597756 597767 TGAGAC 6 2 12
846 hpat1 599394 599405 GTGTGC 6 2 12
847 hpat1 600006 600025 TC 2 10 20
848 hpat1 600026 600037 TATATA 6 2 12
849 hpat1 600041 600052 ATATAT 6 2 12
850 hpat1 600118 600129 TATATA 6 2 12
851 hpat1 601868 601882 TTT 3 5 15
852 hpat1 603188 603199 GAAGTG 6 2 12
853 hpat1 608484 608499 TGAA 4 4 16
854 hpat1 608985 608996 GCTGTG 6 2 12
855 hpat1 609780 609795 AAAC 4 4 16
856 hpat1 610192 610203 TATCTC 6 2 12
857 hpat1 612381 612392 TCACCA 6 2 12
858 hpat1 613446 613457 CCATCC 6 2 12
859 hpat1 613964 613975 TTCTTG 6 2 12
860 hpat1 615611 615622 AGAAGG 6 2 12
861 hpat1 615632 615643 AAGAAG 6 2 12
862 hpat1 616140 616161 A 1 22 22
863 hpat1 617678 617697 TTTTG 5 4 20
864 hpat1 620321 620332 GCCAGC 6 2 12
865 hpat1 620338 620349 GGGGTG 6 2 12
866 hpat1 621050 621061 AGGGCC 6 2 12
867 hpat1 621851 621862 TCTCTC 6 2 12
868 hpat1 622005 622016 GATTTT 6 2 12
869 hpat1 622557 622571 ACC 3 5 15
870 hpat1 622586 622606 CAC 3 7 21
871 hpat1 623139 623150 ACACAA 6 2 12
872 hpat1 623378 623389 TGGACA 6 2 12
873 hpat1 623706 623723 AAATAA 6 3 18
874 hpat1 624013 624030 AAA 3 6 18
875 hpat1 624648 624662 TTT 3 5 15
876 hpat1 624724 624735 ACCTCC 6 2 12
877 hpat1 624982 624993 TTTTTT 6 2 12
878 hpat1 625129 625146 TTTTAT 6 3 18
879 hpat1 625595 625606 AGCCAG 6 2 12
880 hpat1 627030 627041 GAGGCT 6 2 12
881 hpat1 627187 627198 AATAAC 6 2 12
882 hpat1 629078 629092 TGA 3 5 15
883 hpat1 631394 631405 AACAAC 6 2 12
884 hpat1 631429 631443 AAA 3 5 15
885 hpat1 632704 632731 A 1 28 28
886 hpat1 632732 632743 GTGGGG 6 2 12
887 hpat1 633722 633733 ACTCTC 6 2 12
888 hpat1 634319 634330 CTTCCT 6 2 12
889 hpat1 634612 634623 TCCTTG 6 2 12
890 hpat1 635904 635918 AAA 3 5 15
891 hpat1 637886 637900 AAA 3 5 15
892 hpat1 639391 639402 CGCCGC 6 2 12
893 hpat1 639742 639759 GCGGGG 6 3 18
894 hpat1 640687 640698 CCTTTC 6 2 12
895 hpat1 642772 642783 AAAAAA 6 2 12
896 hpat1 646664 646681 AAA 3 6 18
897 hpat1 649141 649152 AGCTGG 6 2 12
898 hpat1 649225 649236 GTGTGT 6 2 12
899 hpat1 649865 649876 GCGAGG 6 2 12
900 hpat1 650432 650443 CCGCCC 6 2 12
901 hpat1 650444 650455 CGCCGC 6 2 12
902 hpat1 651677 651688 CCCCTC 6 2 12
903 hpat1 651819 651830 TGCCTC 6 2 12
904 hpat1 652399 652410 GATAGT 6 2 12
905 hpat1 652602 652613 CTCCTT 6 2 12
906 hpat1 653054 653065 GGAAGG 6 2 12
907 hpat1 655086 655103 TACTGC 6 3 18
908 hpat1 655717 655728 AGCCTC 6 2 12
909 hpat1 656009 656020 CCTCCC 6 2 12
910 hpat1 657238 657249 AGGCCA 6 2 12
911 hpat1 657509 657520 TTGGAC 6 2 12
912 hpat1 657610 657621 TGGACC 6 2 12
913 hpat1 658606 658633 GT 2 14 28
914 hpat1 658934 658949 CCCT 4 4 16
915 hpat1 660059 660070 GTGTCA 6 2 12
916 hpat1 660332 660343 GCTGTA 6 2 12
917 hpat1 660404 660415 CTCTCT 6 2 12
918 hpat1 660566 660577 TCTCTC 6 2 12
919 hpat1 660592 660621 TC 2 15 30
920 hpat1 660622 660647 AC 2 13 26
921 hpat1 660896 660927 GT 2 16 32
922 hpat1 660985 660996 TGGGGA 6 2 12
923 hpat1 661631 661642 CCCCCG 6 2 12
924 hpat1 661936 661947 GGCTCG 6 2 12
925 hpat1 661953 661964 GGCGGC 6 2 12
926 hpat1 662189 662200 CAGAGA 6 2 12
927 hpat1 662391 662402 ACACAC 6 2 12
928 hpat1 662617 662628 CCTCTC 6 2 12
929 hpat1 663604 663618 AAA 3 5 15
930 hpat1 663771 663791 AAT 3 7 21
931 hpat1 664081 664092 TTTTTT 6 2 12
932 hpat1 667668 667679 AATGGG 6 2 12
933 hpat1 668025 668036 GTGTAA 6 2 12
934 hpat1 668718 668729 CCATTT 6 2 12
935 hpat1 669900 669914 AAA 3 5 15
936 hpat1 670208 670219 TTTTTA 6 2 12
937 hpat1 671191 671202 GAGGGG 6 2 12
938 hpat1 671869 671886 TACAAA 6 3 18
939 hpat1 671887 671925 TAA 3 13 39
940 hpat1 671964 671975 CTGAGG 6 2 12
941 hpat1 672093 672104 AACAAC 6 2 12
942 hpat1 672105 672116 AAAGAA 6 2 12
943 hpat1 672622 672639 AAA 3 6 18
944 hpat1 675613 675624 AAGTGT 6 2 12
945 hpat1 675731 675742 GGCACA 6 2 12
946 hpat1 676339 676350 ATTTCT 6 2 12
947 hpat1 676352 676363 TTTATT 6 2 12
948 hpat1 677003 677036 GT 2 17 34
949 hpat1 677457 677468 AGAAAG 6 2 12
950 hpat1 678388 678399 TGAAAC 6 2 12
951 hpat1 678858 678869 TTTTTC 6 2 12
952 hpat1 682346 682361 TTAT 4 4 16
953 hpat1 684578 684589 AATAAC 6 2 12
954 hpat1 684953 684964 AGAGCC 6 2 12
955 hpat1 685312 685323 GGAGGT 6 2 12
956 hpat1 685386 685413 A 1 28 28
957 hpat1 686068 686079 CGGGGG 6 2 12
958 hpat1 686825 686842 TTT 3 6 18
959 hpat1 686899 686910 CAGCCT 6 2 12
960 hpat1 687586 687605 TCAA 4 5 20
961 hpat1 687651 687662 AGGGAG 6 2 12
962 hpat1 688067 688078 TCCTGG 6 2 12
963 hpat1 689018 689037 AAAT 4 5 20
964 hpat1 690132 690143 TTTCTT 6 2 12
965 hpat1 690303 690314 AAGAGG 6 2 12
966 hpat1 693707 693718 AGGGGC 6 2 12
967 hpat1 694426 694437 TTTTGT 6 2 12
968 hpat1 694506 694517 CAGCCT 6 2 12
969 hpat1 694598 694609 TTTTTT 6 2 12
970 hpat1 694903 694914 TATTTA 6 2 12
971 hpat1 695265 695276 CAAGGC 6 2 12
972 hpat1 696496 696507 CGCCCC 6 2 12
973 hpat1 696718 696729 CGCCCC 6 2 12
974 hpat1 697067 697078 TGGGGG 6 2 12
975 hpat1 697568 697589 GT 2 11 22
976 hpat1 698582 698593 TCTGAT 6 2 12
977 hpat1 698951 698962 AATTGA 6 2 12
978 hpat1 699157 699171 TTT 3 5 15