diff microsatbed.xml @ 13:b9a4e628599e draft

planemo upload for repository https://github.com/fubar2/microsatbed commit bfb57ff3a931bc3f3d3549707f7bcf1f561c84c6-dirty
author fubar
date Tue, 13 Aug 2024 06:27:46 +0000
parents 74d53887b929
children 9513e95d68f6
line wrap: on
line diff
--- a/microsatbed.xml	Tue Aug 13 05:58:10 2024 +0000
+++ b/microsatbed.xml	Tue Aug 13 06:27:46 2024 +0000
@@ -118,7 +118,7 @@
         <param name="hexamin" type="integer" min="2" value="2" label="Minimum repeats required for hexamers"/>
     </inputs>
     <outputs>
-      <data name="bed" format="bed" label="STR on $reffa.element_identifier">
+      <data name="bed" format="bed" label="STR output">
         <change_format>
             <when input="mode_cond.outformat" value="gff" format="gff"/>
             <when input="mode_cond.outformat" value="csv" format="csv"/>
@@ -204,8 +204,8 @@
         </test>
         <test expect_num_outputs="1">
             <conditional name="reference_genome">
-                <param name="genome_type_select" value="history"/>
-                <param name="reffa" value="humsamp.fa"/>
+                <param name="genome_type_select" value="indexed"/>
+                <param name="reffa" value="hgtest"/>
             </conditional>
             <conditional name="mode_cond">
                 <param name="mode" value="SPECIFICBW"/>