Mercurial > repos > fubar > microsatbedfubar
changeset 11:c39202869825 draft
planemo upload for repository https://github.com/fubar2/microsatbed commit bfb57ff3a931bc3f3d3549707f7bcf1f561c84c6
| author | fubar |
|---|---|
| date | Tue, 13 Aug 2024 05:57:05 +0000 |
| parents | 43a8165cec3a |
| children | 74d53887b929 |
| files | microsatbed.xml |
| diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
line wrap: on
line diff
--- a/microsatbed.xml Tue Aug 13 05:33:14 2024 +0000 +++ b/microsatbed.xml Tue Aug 13 05:57:05 2024 +0000 @@ -1,5 +1,5 @@ -<tool id="microsatbedfubar" name="STR to bed" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> +<tool id="microsatbed" name="STR to bed" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> <description>Short Tandem Repeats to bed features from fasta</description> <macros> <token name="@TOOL_VERSION@">1.3.2</token> @@ -118,7 +118,7 @@ <param name="hexamin" type="integer" min="2" value="2" label="Minimum repeats required for hexamers"/> </inputs> <outputs> - <data name="bed" format="bed" label="STR"> + <data name="bed" format="bed" label="STR on $reffa.element_identifier"> <change_format> <when input="mode_cond.outformat" value="gff" format="gff"/> <when input="mode_cond.outformat" value="csv" format="csv"/> @@ -204,8 +204,8 @@ </test> <test expect_num_outputs="1"> <conditional name="reference_genome"> - <param name="genome_type_select" value="indexed"/> - <param name="reffa" value="hgtest"/> + <param name="genome_type_select" value="history"/> + <param name="reffa" value="humsamp.fa"/> </conditional> <conditional name="mode_cond"> <param name="mode" value="SPECIFICBW"/>