comparison toolfactory/rgToolFactory2.py @ 67:2cb06a59d84b draft

Uploaded

66:bc1977b1f7b5

    def planemo_test(self, genoutputs=True):
        """planemo is a requirement so is available for testing
        and for generating test outputs if command or test overrides are supplied
        test outputs are sent to repdir for display
        """
        xreal = "%s.xml" % self.tool_name
        if os.path.exists(self.tlog):
            tout = open(self.tlog, "a")
        else:

67:2cb06a59d84b

    def planemo_test(self, genoutputs=True):
        """planemo is a requirement so is available for testing
        and for generating test outputs if command or test overrides are supplied
        test outputs are sent to repdir for display
        planemo test --engine docker_galaxy --database_type docker_postgres --galaxy_root /galaxy-central pyrevpos/pyrevpos.xml
        """
        xreal = "%s.xml" % self.tool_name
        if os.path.exists(self.tlog):
            tout = open(self.tlog, "a")
        else: