comparison toolfactory/rgToolFactory2.xml @ 131:72d190989c68 draft

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130:e8e8071c9d0c

            <param name="input_help" type="text" value="" label="This will become help text on the form." >
            </param>
            <param name="input_CL" type="text" label="Positional: ordinal integer. Argparse: argument name. STDIN if the executable/script expects it"
              help="If you will pass positional parameters, enter the integer ordinal for this parameter. If Argparse style, '--' will be prepended or '-' if single character" value="">
            </param>
            <param name="input_repeat" type="hidden" checked="False" truevalue="1"  falsevalue="0" label="Allow user to repeat this input as many times as needed." />
        </repeat>
        <repeat name="history_outputs" title="one or more new history items output by the executable to appear in the user history after the tool runs"
             help="The name will become a history item for users of the new tool you are making containing one of it's outputs">
            <param name="history_name" type="text" label="Name for this output to appear in new history" optional="false"
              help="No spaces! Argparse will also use this name as --[name]">

          </param>
          <param name="param_CL" type="text" label="Positional ordinal | argparse argument name"
              help="Using positional parameters, enter the integer ordinal for this parameter on the command line. Using Argparse style, '--' will be prepended on the CL" value="" />
          <param name="param_CLprefixed" type="text" label="Override the generated default argparse name prefix if not empty - eg ----foo if needed"
              help="Some targets like Planemo expect an unadorned action like 'test' before --galaxy_root." value="" />
          <param name="param_repeat" type="hidden" checked="False" truevalue="1"  falsevalue="0" label="Allow user to repeat this as many times as needed." />
        </repeat>
        </section>
     </xml>
  </macros>

<requirements>
   <requirement type="package" version="0.4.12">galaxyxml</requirement>
   <requirement type="package" version="0.14.0">bioblend</requirement>
   <requirement type="package" version="0.10.6">ephemeris</requirement>
   <requirement type="package" version="0.74.3">planemo</requirement>
</requirements>

"type": "$apar.ap_type.param_type","CL": "$apar.param_CL","override": "$apar.param_CLprefixed", "repeat": "$apar.param_repeat"}'
       #end if
     #end for
   #end if
     #for $intab in $io_param.ppass.io.history_inputs:
--input_files '{"name": "$intab.input_files", "CL": "$intab.input_CL", "format": "$intab.input_formats", "label": "$intab.input_label", "help": "$intab.input_help"}'
     #end for
     #for $otab in $io_param.ppass.io.history_outputs:
--output_files '{"name": "$otab.history_name", "format": "$otab.history_format", "CL": "$otab.history_CL", "test": "$otab.history_test"}'
     #end for
     #for $collect in $io_param.ppass.io.collection_outputs:

131:72d190989c68

            <param name="input_help" type="text" value="" label="This will become help text on the form." >
            </param>
            <param name="input_CL" type="text" label="Positional: ordinal integer. Argparse: argument name. STDIN if the executable/script expects it"
              help="If you will pass positional parameters, enter the integer ordinal for this parameter. If Argparse style, '--' will be prepended or '-' if single character" value="">
            </param>
            <param name="input_repeat" type="boolean" checked="False" truevalue="1"  falsevalue="0" label="Allow user to repeat this input as many times as wanted - script/executable must parse these."/>
        </repeat>
        <repeat name="history_outputs" title="one or more new history items output by the executable to appear in the user history after the tool runs"
             help="The name will become a history item for users of the new tool you are making containing one of it's outputs">
            <param name="history_name" type="text" label="Name for this output to appear in new history" optional="false"
              help="No spaces! Argparse will also use this name as --[name]">

          </param>
          <param name="param_CL" type="text" label="Positional ordinal | argparse argument name"
              help="Using positional parameters, enter the integer ordinal for this parameter on the command line. Using Argparse style, '--' will be prepended on the CL" value="" />
          <param name="param_CLprefixed" type="text" label="Override the generated default argparse name prefix if not empty - eg ----foo if needed"
              help="Some targets like Planemo expect an unadorned action like 'test' before --galaxy_root." value="" />
          <param name="param_repeat" type="boolean" checked="False" truevalue="1"  falsevalue="0" label="Allow user to repeat this as many times as needed." />
        </repeat>
        </section>
     </xml>
  </macros>

<requirements>
   <requirement type="package" version="0.4.13">galaxyxml</requirement>
   <requirement type="package" version="0.14.0">bioblend</requirement>
   <requirement type="package" version="0.10.6">ephemeris</requirement>
   <requirement type="package" version="0.74.3">planemo</requirement>
</requirements>

"type": "$apar.ap_type.param_type","CL": "$apar.param_CL","override": "$apar.param_CLprefixed", "repeat": "$apar.param_repeat"}'
       #end if
     #end for
   #end if
     #for $intab in $io_param.ppass.io.history_inputs:
--input_files '{"name": "$intab.input_files", "CL": "$intab.input_CL", "format": "$intab.input_formats", "label": "$intab.input_label", "help": "$intab.input_help", "repeat": "$intab.input_repeat"}'
     #end for
     #for $otab in $io_param.ppass.io.history_outputs:
--output_files '{"name": "$otab.history_name", "format": "$otab.history_format", "CL": "$otab.history_CL", "test": "$otab.history_test"}'
     #end for
     #for $collect in $io_param.ppass.io.collection_outputs: