comparison toolfactory/rgToolFactory2.xml @ 85:933e68f8bdd2 draft

Uploaded

84:5304cda01f60

--packages "$packages"
   #if $usescript.choosescript == "yes":
--script_path "$runme"
--sysexe "$usescript.scriptrunner"
    #end if
--tool_name="$tool_name"  --user_email="$__user_email__" --citations="$citeme"  --parampass="$ppass.parampass"

   #if str($makeMode.make_Tool)!="runonly":
--make_Tool="$makeMode.make_Tool"
--tool_desc="$makeMode.tool_desc"
--tool_version="$makeMode.tool_version"
--help_text="$helpme"
--new_tool="$new_tool"
--toolshed_api_key="$makeMode.toolshed_apikey"
--galaxy_api_key="$makeMode.galaxy_apikey"
--toolshed_url="$makeMode.toolshed_url"
--galaxy_url="$makeMode.galaxy_url"
   #end if
   #if $ppass.parampass != '0':
     #if str($ppass.edit_params) == "yes":
--edit_additional_parameters
     #end if
     #for apar in $ppass.additional_parameters:
--additional_parameters="$apar.param_name~~~$apar.param_value~~~$apar.param_label~~~$apar.param_help~~~$apar.param_type~~~$apar.param_CL~~~$apar.param_CLprefixed"
     #end for
   #end if
     #for $intab in $ppass.history_inputs:
--input_files="$intab.input_files~~~$intab.input_CL~~~$intab.input_formats~~~$intab.input_label~~~$intab.input_help"
     #end for
     #for $otab in $ppass.history_outputs:
--output_files "$otab.history_name~~~$otab.history_format~~~$otab.history_CL~~~$otab.history_test"
     #end for
--galaxy_root "$__root_dir__"

85:933e68f8bdd2

--packages "$packages"
   #if $usescript.choosescript == "yes":
--script_path "$runme"
--sysexe "$usescript.scriptrunner"
    #end if
--tool_name "$tool_name"  --user_email "$__user_email__" --citations "$citeme"  --parampass "$ppass.parampass"

   #if str($makeMode.make_Tool)!="runonly":
--make_Tool "$makeMode.make_Tool"
--tool_desc "$makeMode.tool_desc"
--tool_version "$makeMode.tool_version"
--help_text "$helpme"
--new_tool "$new_tool"
--toolshed_api_key "$makeMode.toolshed_apikey"
--galaxy_api_key "$makeMode.galaxy_apikey"
--toolshed_url "$makeMode.toolshed_url"
--galaxy_url "$makeMode.galaxy_url"
   #end if
   #if $ppass.parampass != '0':
     #if str($ppass.edit_params) == "yes":
--edit_additional_parameters
     #end if
     #for apar in $ppass.additional_parameters:
--additional_parameters "$apar.param_name~~~$apar.param_value~~~$apar.param_label~~~$apar.param_help~~~$apar.param_type~~~$apar.param_CL~~~$apar.param_CLprefixed"
     #end for
   #end if
     #for $intab in $ppass.history_inputs:
--input_files "$intab.input_files~~~$intab.input_CL~~~$intab.input_formats~~~$intab.input_label~~~$intab.input_help"
     #end for
     #for $otab in $ppass.history_outputs:
--output_files "$otab.history_name~~~$otab.history_format~~~$otab.history_CL~~~$otab.history_test"
     #end for
--galaxy_root "$__root_dir__"