comparison rgToolFactory2.py @ 4:b85a3b92e9f7 draft

Uploaded

3:d75fd880fce2

        self.toolname = re.sub('[^a-zA-Z0-9_]+', '', opts.tool_name) # a sanitizer now does this but..
        self.toolid = self.toolname
        self.myname = sys.argv[0] # get our name because we write ourselves out as a tool later
        self.pyfile = self.myname # crude but efficient - the cruft won't hurt much
        self.xmlfile = '%s.xml' % self.toolname
        s = open(self.opts.script_path,'r').readlines()
        s = [x.rstrip() for x in s] # remove pesky dos line endings if needed
        self.script = '\n'.join(s)
        fhandle,self.sfile = tempfile.mkstemp(prefix=self.toolname,suffix=".%s" % (opts.interpreter))
        tscript = open(self.sfile,'w') # use self.sfile as script source for Popen
        tscript.write(self.script)
        tscript.close()
        self.indentedScript = '\n'.join([' %s' % html_escape(x) for x in s]) # for restructured text in help
        self.escapedScript = '\n'.join([html_escape(x) for x in s])
        self.elog = os.path.join(self.opts.output_dir,"%s_error.log" % self.toolname)
        if opts.output_dir: # may not want these complexities 
            self.tlog = os.path.join(self.opts.output_dir,"%s_runner.log" % self.toolname)
            art = '%s.%s' % (self.toolname,opts.interpreter)
            artpath = os.path.join(self.opts.output_dir,art) # need full path

4:b85a3b92e9f7

        self.toolname = re.sub('[^a-zA-Z0-9_]+', '', opts.tool_name) # a sanitizer now does this but..
        self.toolid = self.toolname
        self.myname = sys.argv[0] # get our name because we write ourselves out as a tool later
        self.pyfile = self.myname # crude but efficient - the cruft won't hurt much
        self.xmlfile = '%s.xml' % self.toolname
        rx = open(self.opts.script_path,'r').readlines()
        rx = [x.rstrip() for x in rx] # remove pesky dos line endings if needed
        self.script = '\n'.join(rx)
        fhandle,self.sfile = tempfile.mkstemp(prefix=self.toolname,suffix=".%s" % (opts.interpreter))
        tscript = open(self.sfile,'w') # use self.sfile as script source for Popen
        tscript.write(self.script)
        tscript.close()
        self.indentedScript = "<![CDATA[%s]]>" % '\n'.join([' %s' % x for x in rx]) # for restructured text in help
        self.escapedScript = "<![CDATA[%s]]>" % self.script)
        self.elog = os.path.join(self.opts.output_dir,"%s_error.log" % self.toolname)
        if opts.output_dir: # may not want these complexities 
            self.tlog = os.path.join(self.opts.output_dir,"%s_runner.log" % self.toolname)
            art = '%s.%s' % (self.toolname,opts.interpreter)
            artpath = os.path.join(self.opts.output_dir,art) # need full path