# HG changeset patch # User fubar # Date 1605569045 0 # Node ID 1fa49a9a4ec5479e95405d2ec60941271e028556 # Parent 46db8143adb7e3ffab21d38fb518323cfcde1920 Uploaded diff -r 46db8143adb7 -r 1fa49a9a4ec5 toolfactory/rgToolFactory2.xml --- a/toolfactory/rgToolFactory2.xml Mon Nov 16 02:42:49 2020 +0000 +++ b/toolfactory/rgToolFactory2.xml Mon Nov 16 23:24:05 2020 +0000 @@ -132,11 +132,10 @@ - galaxyxml - bioblend - planemo - quay.io/fubar2/toolfactorybiocontainer - + + planemo + galaxyxml + foo - diff -r 46db8143adb7 -r 1fa49a9a4ec5 toolfactory/whoosh.sh --- a/toolfactory/whoosh.sh Mon Nov 16 02:42:49 2020 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,16 +0,0 @@ -# using the galaxy venv this seems to work -. /galaxy_venv/bin/activate -python scripts/tool_shed/build_ts_whoosh_index.py -c config/tool_shed.yml --config-section tool_shed -# eeesh. /etc/galaxy is where the actual galaxy.yml lives - despite other configs being where they might be expected -# fix tool_shed.yml to 0.0.0.0 and admin email -# add tgz to datatypes :( -# need to source a venv in /export/tool_deps/toolfactorydeps/0.01/fubar/toolfactorydeps/9e9428fe9134/env.sh -# as nothing was done by the setup_virtualenv step apparently. -# gcc and friends for planemo pip installation -# File "/galaxy-central/lib/galaxy/tool_util/verify/interactor.py", line 595, in -# test_user = [user for user in all_users if user["email"] == email][0] -# add local to tool_sheds_conf.xml -# -# -# mercurial > 5.5!! -