Mercurial > repos > fubar > tool_factory_2
changeset 51:4b71b252eacb draft
Uploaded
| author | fubar |
|---|---|
| date | Sun, 30 Aug 2020 06:36:26 -0400 |
| parents | bf432f4486c7 |
| children | e8bf01166d74 |
| files | toolfactory/rgToolFactory2.py toolfactory/tool_dependencies.xml |
| diffstat | 2 files changed, 7 insertions(+), 11 deletions(-) [+] |
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--- a/toolfactory/rgToolFactory2.py Sun Aug 30 01:45:27 2020 -0400 +++ b/toolfactory/rgToolFactory2.py Sun Aug 30 06:36:26 2020 -0400 @@ -719,16 +719,12 @@ "--update_test_data", "--galaxy_python_version", "3.6", - "--no_conda_auto_install", - "--no_conda_auto_init", xreal, ] else: cll = ["planemo", "test", "--galaxy_python_version", "3.6", "--galaxy_root", self.args.galaxy_root, - "--no_conda_auto_install", - "--no_conda_auto_init", xreal,] p = subprocess.run( cll, shell=True, cwd=self.tooloutdir, stderr=tout, stdout=tout @@ -769,7 +765,7 @@ self.args.toolshed_url, "--section_label", "Generated Tools", - "--install_tool_dependencies", + ] print("running\n", " ".join(cll)) p = subprocess.run(cll, shell=False, stderr=tout, stdout=tout)
--- a/toolfactory/tool_dependencies.xml Sun Aug 30 01:45:27 2020 -0400 +++ b/toolfactory/tool_dependencies.xml Sun Aug 30 06:36:26 2020 -0400 @@ -3,12 +3,12 @@ <package name="planemoenv"> <install version="0.1"> <actions> - <action python="3.6" type="setup_virtualenv"> - planemo==0.72.0.dev0 - bioblend==0.14.0 - ephemeris==0.10.6 - galaxyxml==0.4.10 - lxml==4.5.1 + <action python="3.7" type="setup_virtualenv"> +planemo==0.72.0.dev0 +bioblend==0.14.0 +ephemeris==0.10.6 +galaxyxml==0.4.10 +lxml==4.5.1 </action> </actions> </install>