Mercurial > repos > fubar > tool_factory_2
changeset 142:b36f12eb99dc draft
Uploaded
author | fubar |
---|---|
date | Sat, 17 Apr 2021 12:29:31 +0000 |
parents | b7b0c4527460 |
children | 4de39d209c5b |
files | toolfactory/rgToolFactory2.py |
diffstat | 1 files changed, 0 insertions(+), 5 deletions(-) [+] |
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--- a/toolfactory/rgToolFactory2.py Sat Apr 17 11:07:36 2021 +0000 +++ b/toolfactory/rgToolFactory2.py Sat Apr 17 12:29:31 2021 +0000 @@ -1043,10 +1043,6 @@ and for generating test outputs if command or test overrides are supplied test outputs are sent to repdir for display """ - penv = os.environ - pconfig = os.path.join(self.args.tool_dir, '.planemo.yml') - penv["PLANEMO_GLOBAL_CONFIG_PATH"] = pconfig - self.set_planemo_galaxy_root(self.args.galaxy_root, config_path=pconfig) xreal = "%s.xml" % self.tool_name tool_test_path = os.path.join( self.repdir, f"{self.tool_name}_planemo_test_report.html" @@ -1073,7 +1069,6 @@ p = subprocess.run( cll, shell=False, - env=penv, cwd=self.tooloutdir, stderr=tout, stdout=tout,