comparison alevinQC_galaxy/test-data/meta_info.json @ 0:5f0da20666fa draft default tip

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author fwuennemann
date Thu, 01 Apr 2021 00:55:48 +0000
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-1:000000000000 0:5f0da20666fa
1 {
2 "salmon_version": "0.14.0",
3 "samp_type": "none",
4 "opt_type": "vb",
5 "quant_errors": [],
6 "num_libraries": 1,
7 "library_types": [
8 "ISR"
9 ],
10 "frag_dist_length": 1001,
11 "seq_bias_correct": false,
12 "gc_bias_correct": false,
13 "num_bias_bins": 4096,
14 "mapping_type": "mapping",
15 "num_valid_targets": 322667,
16 "num_decoy_targets": 0,
17 "num_eq_classes": 0,
18 "serialized_eq_classes": false,
19 "eq_class_properties": [
20 "range_factorized"
21 ],
22 "length_classes": [
23 503,
24 693,
25 1157,
26 2483,
27 123179
28 ],
29 "index_seq_hash": "4f7cbd319e66dca52660419a0c3c25fa38f5f032ffdf55a312e6d3b71f5bd879",
30 "index_name_hash": "79cc9f9def5f5510413a9a6b25970dd6cf85d0c8cc41e12a609a0a3363d4425e",
31 "index_seq_hash512": "015fdd8ed31512d20031dbffdfbda7aa85c9c16894362fc4424a950728f3eb1606c2e29b7e0302eab964a1c634c97bf455717b90807f2bc020c69eec9d611912",
32 "index_name_hash512": "a89fb904eaca05c8623cfbefc20e8e09ffbec7a34e1b866a367828605659a2dcfc6ed37a32c426e4ec55bd6db56fda6c7ed6baff78f3b0157fe0b17236b363b2",
33 "num_bootstraps": 0,
34 "num_processed": 7197662,
35 "num_mapped": 4869156,
36 "num_decoy_fragments": 0,
37 "num_dovetail_fragments": 0,
38 "num_fragments_filtered_vm": 0,
39 "num_alignments_below_threshold_for_mapped_fragments_vm": 0,
40 "percent_mapped": 67.64913384373982,
41 "call": "quant",
42 "start_time": "Thu May 30 13:06:55 2019",
43 "end_time": "Thu May 30 13:08:05 2019"
44 }