Mercurial > repos > galaxy-australia > alphafold2
comparison README.rst @ 12:7fbec959cf2b draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au commit 6fdbb269efd97b6f5c6ab40db4ab0b23459f884b
| author | galaxy-australia |
|---|---|
| date | Fri, 16 Sep 2022 06:14:06 +0000 |
| parents | 81d1ef460bb3 |
| children | d00e15139065 |
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| 11:81d1ef460bb3 | 12:7fbec959cf2b |
|---|---|
| 137 └── uniref90.fasta | 137 └── uniref90.fasta |
| 138 | 138 |
| 139 In more recent releases of the AlphaFold tool, you will need to download an | 139 In more recent releases of the AlphaFold tool, you will need to download an |
| 140 additional file to allow the ``reduced_dbs`` option: | 140 additional file to allow the ``reduced_dbs`` option: |
| 141 | 141 |
| 142 : | 142 :: |
| 143 | |
| 143 bash scripts/download_small_bfd.sh $ALPHAFOLD_DB_ROOT | 144 bash scripts/download_small_bfd.sh $ALPHAFOLD_DB_ROOT |
| 144 | 145 |
| 145 The ``$ALPHAFOLD_DB_ROOT`` directory should now contain this additional file: | 146 The ``$ALPHAFOLD_DB_ROOT`` directory should now contain this additional file: |
| 146 | 147 |
| 147 : | 148 :: |
| 149 | |
| 148 data/alphafold_databases | 150 data/alphafold_databases |
| 149 ├── small_bfd | 151 ├── small_bfd |
| 150 │ └── bfd-first_non_consensus_sequences.fasta | 152 │ └── bfd-first_non_consensus_sequences.fasta |
| 151 | 153 |
| 152 | 154 |