Mercurial > repos > galaxy-australia > alphafold2
comparison macro_test_output.xml @ 15:a58f7eb0df2c draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au commit fd45a857a71358e7e5375dcfb5043cdc8560c5a5
author | galaxy-australia |
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date | Fri, 10 Mar 2023 02:48:07 +0000 |
parents | |
children | 6ab1a261520a |
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14:d00e15139065 | 15:a58f7eb0df2c |
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1 <macros> | |
2 <xml name="test_output_plddts"> | |
3 <output name="output_plddts"> | |
4 <assert_contents> | |
5 <has_n_lines n="5"/> | |
6 <has_size min="2000" /> | |
7 </assert_contents> | |
8 </output> | |
9 </xml> | |
10 | |
11 <xml name="test_output_confidence_scores"> | |
12 <output name="output_confidence_scores"> | |
13 <assert_contents> | |
14 <has_n_columns n="2"/> | |
15 <has_n_lines n="5"/> | |
16 <has_size value="70" delta="50"/> | |
17 </assert_contents> | |
18 </output> | |
19 </xml> | |
20 | |
21 <xml name="test_output_relax_json"> | |
22 <output name="output_relax_json"> | |
23 <assert_contents> | |
24 <has_size min="500" /> | |
25 </assert_contents> | |
26 </output> | |
27 </xml> | |
28 | |
29 <xml name="test_output_pdb_models"> | |
30 <output name="model1"> | |
31 <assert_contents> | |
32 <has_size min="20000"/> | |
33 </assert_contents> | |
34 </output> | |
35 <output name="model2"> | |
36 <assert_contents> | |
37 <has_size min="20000"/> | |
38 </assert_contents> | |
39 </output> | |
40 <output name="model3"> | |
41 <assert_contents> | |
42 <has_size min="20000"/> | |
43 </assert_contents> | |
44 </output> | |
45 <output name="model4"> | |
46 <assert_contents> | |
47 <has_size min="20000"/> | |
48 </assert_contents> | |
49 </output> | |
50 <output name="model5"> | |
51 <assert_contents> | |
52 <has_size min="20000"/> | |
53 </assert_contents> | |
54 </output> | |
55 </xml> | |
56 | |
57 <xml name="test_output_plots_1"> | |
58 <!-- For one-panel plot without PAE heatmap --> | |
59 <output name="plot_ranked_0"> | |
60 <assert_contents> | |
61 <has_size min="10000" max="50000" /> | |
62 </assert_contents> | |
63 </output> | |
64 <output name="plot_ranked_1"> | |
65 <assert_contents> | |
66 <has_size min="10000" max="50000" /> | |
67 </assert_contents> | |
68 </output> | |
69 <output name="plot_ranked_2"> | |
70 <assert_contents> | |
71 <has_size min="10000" max="50000" /> | |
72 </assert_contents> | |
73 </output> | |
74 <output name="plot_ranked_3"> | |
75 <assert_contents> | |
76 <has_size min="10000" max="50000" /> | |
77 </assert_contents> | |
78 </output> | |
79 <output name="plot_ranked_4"> | |
80 <assert_contents> | |
81 <has_size min="10000" max="50000" /> | |
82 </assert_contents> | |
83 </output> | |
84 </xml> | |
85 | |
86 <xml name="test_output_plots_2"> | |
87 <!-- For two-panel plot with PAE heatmap --> | |
88 <output name="plot_ranked_0"> | |
89 <assert_contents> | |
90 <has_size min="50000" max="63000" /> | |
91 </assert_contents> | |
92 </output> | |
93 <output name="plot_ranked_1"> | |
94 <assert_contents> | |
95 <has_size min="50000" max="63000" /> | |
96 </assert_contents> | |
97 </output> | |
98 <output name="plot_ranked_2"> | |
99 <assert_contents> | |
100 <has_size min="50000" max="63000" /> | |
101 </assert_contents> | |
102 </output> | |
103 <output name="plot_ranked_3"> | |
104 <assert_contents> | |
105 <has_size min="50000" max="63000" /> | |
106 </assert_contents> | |
107 </output> | |
108 <output name="plot_ranked_4"> | |
109 <assert_contents> | |
110 <has_size min="50000" max="63000" /> | |
111 </assert_contents> | |
112 </output> | |
113 </xml> | |
114 | |
115 <xml name="test_output_plots_3"> | |
116 <!-- For two-panel plot with PAE heatmap --> | |
117 <output name="plot_ranked_0"> | |
118 <assert_contents> | |
119 <has_size min="220000" max="270000" /> | |
120 </assert_contents> | |
121 </output> | |
122 <output name="plot_ranked_1"> | |
123 <assert_contents> | |
124 <has_size min="220000" max="270000" /> | |
125 </assert_contents> | |
126 </output> | |
127 <output name="plot_ranked_2"> | |
128 <assert_contents> | |
129 <has_size min="220000" max="270000" /> | |
130 </assert_contents> | |
131 </output> | |
132 <output name="plot_ranked_3"> | |
133 <assert_contents> | |
134 <has_size min="220000" max="270000" /> | |
135 </assert_contents> | |
136 </output> | |
137 <output name="plot_ranked_4"> | |
138 <assert_contents> | |
139 <has_size min="220000" max="270000" /> | |
140 </assert_contents> | |
141 </output> | |
142 </xml> | |
143 | |
144 <xml name="test_output_pae_csv"> | |
145 <output name="pae_ranked_0"> | |
146 <assert_contents> | |
147 <has_size min="5000"/> | |
148 </assert_contents> | |
149 </output> | |
150 <output name="pae_ranked_1"> | |
151 <assert_contents> | |
152 <has_size min="5000"/> | |
153 </assert_contents> | |
154 </output> | |
155 <output name="pae_ranked_2"> | |
156 <assert_contents> | |
157 <has_size min="5000"/> | |
158 </assert_contents> | |
159 </output> | |
160 <output name="pae_ranked_3"> | |
161 <assert_contents> | |
162 <has_size min="5000"/> | |
163 </assert_contents> | |
164 </output> | |
165 <output name="pae_ranked_4"> | |
166 <assert_contents> | |
167 <has_size min="5000"/> | |
168 </assert_contents> | |
169 </output> | |
170 </xml> | |
171 | |
172 <xml name="test_output_pickles"> | |
173 <output name="output_ranked_4_pkl"> | |
174 <assert_contents> | |
175 <has_size min="1000000"/> | |
176 </assert_contents> | |
177 </output> | |
178 <output name="output_ranked_3_pkl"> | |
179 <assert_contents> | |
180 <has_size min="1000000"/> | |
181 </assert_contents> | |
182 </output> | |
183 <output name="output_ranked_2_pkl"> | |
184 <assert_contents> | |
185 <has_size min="1000000"/> | |
186 </assert_contents> | |
187 </output> | |
188 <output name="output_ranked_1_pkl"> | |
189 <assert_contents> | |
190 <has_size min="1000000"/> | |
191 </assert_contents> | |
192 </output> | |
193 <output name="output_ranked_0_pkl"> | |
194 <assert_contents> | |
195 <has_size min="1000000"/> | |
196 </assert_contents> | |
197 </output> | |
198 </xml> | |
199 </macros> |