Mercurial > repos > galaxy-australia > alphafold2
diff test-data/multimer_output/msas/B/mgnify_hits.sto @ 9:3bd420ec162d draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au commit 7726c3cba165bdc8fc6366ec0ce6596e55657468
| author | galaxy-australia |
|---|---|
| date | Tue, 13 Sep 2022 22:04:12 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/multimer_output/msas/B/mgnify_hits.sto Tue Sep 13 22:04:12 2022 +0000 @@ -0,0 +1,106 @@ +# STOCKHOLM 1.0 + +#=GS MGYP000809681506/1-147 DE [subseq from] PL=00 UP=1 BIOMES=0000000011000 +#=GS MGYP000131797357/10-156 DE [subseq from] PL=10 UP=0 BIOMES=0000000000001 +#=GS MGYP000607955645/1-147 DE [subseq from] PL=00 UP=1 BIOMES=0000000011000 +#=GS MGYP001138391873/1-147 DE [subseq from] PL=00 UP=1 BIOMES=1000000000000 +#=GS MGYP001111532658/8-155 DE [subseq from] PL=01 UP=0 BIOMES=0000000000001 +#=GS MGYP000442294717/26-102 DE [subseq from] PL=10 UP=0 BIOMES=1000000000000 +#=GS MGYP000214952500/50-125 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000639461158/2-34 DE [subseq from] PL=01 UP=0 BIOMES=0000000000001 +#=GS MGYP000639461158/53-143 DE [subseq from] PL=01 UP=0 BIOMES=0000000000001 +#=GS MGYP000321112601/1-74 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000669192840/7-90 DE [subseq from] PL=00 UP=0 BIOMES=0101000000000 +#=GS MGYP000335830788/32-110 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000559925714/32-110 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000607025940/7-103 DE [subseq from] PL=01 UP=0 BIOMES=0000000000001 +#=GS MGYP000450732916/72-150 DE [subseq from] PL=01 UP=0 BIOMES=0000000000001 +#=GS MGYP001121356039/35-179 DE [subseq from] PL=01 UP=0 BIOMES=1000000000000 +#=GS MGYP000836687451/15-153 DE [subseq from] PL=01 UP=0 BIOMES=0000000011000 +#=GS MGYP000172242919/33-121 DE [subseq from] PL=10 UP=0 BIOMES=0000000011000 +#=GS MGYP000585341746/8-146 DE [subseq from] PL=10 UP=0 BIOMES=0000000000001 +#=GS MGYP000306499386/1-66 DE [subseq from] PL=00 UP=0 BIOMES=0101000000000 +#=GS MGYP000694104832/8-83 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000212149699/1-52 DE [subseq from] PL=00 UP=0 BIOMES=0000000010100 +#=GS MGYP000386264740/1-52 DE [subseq from] PL=01 UP=0 BIOMES=1000000000000 +#=GS MGYP000441972666/10-52 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000304945179/1-72 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP001143026688/4-59 DE [subseq from] PL=01 UP=0 BIOMES=0000000011000 +#=GS MGYP000270001578/32-81 DE [subseq from] PL=01 UP=0 BIOMES=0000000010100 +#=GS MGYP001069732337/13-151 DE [subseq from] PL=01 UP=0 BIOMES=1000000000000 +#=GS MGYP000742755994/10-46 DE [subseq from] PL=00 UP=0 BIOMES=1000000011000 +#=GS MGYP000713428126/1-50 DE [subseq from] PL=00 UP=0 BIOMES=0101000000000 +#=GS MGYP000462927881/1-41 DE [subseq from] PL=00 UP=0 BIOMES=1000000000000 +#=GS MGYP000026201981/1-34 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000969813914/16-146 DE [subseq from] PL=01 UP=0 BIOMES=0110000000000 +#=GS MGYP000969813914/178-293 DE [subseq from] PL=01 UP=0 BIOMES=0110000000000 +#=GS MGYP000358470208/58-90 DE [subseq from] PL=00 UP=0 BIOMES=0000000010100 +#=GS MGYP000128452298/2-38 DE [subseq from] PL=00 UP=0 BIOMES=0000000010100 +#=GS MGYP000729474694/1-93 DE [subseq from] PL=10 UP=0 BIOMES=0000000011000 +#=GS MGYP000701481948/4-73 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000539442244/4-70 DE [subseq from] PL=00 UP=0 BIOMES=0101000000000 +#=GS MGYP001145220054/370-451 DE [subseq from] PL=10 UP=0 BIOMES=0110000000000 +#=GS MGYP001145220054/517-598 DE [subseq from] PL=10 UP=0 BIOMES=0110000000000 +#=GS MGYP001152833638/1-56 DE [subseq from] PL=10 UP=0 BIOMES=0000000011000 +#=GS MGYP001132506692/1-33 DE [subseq from] PL=10 UP=0 BIOMES=0000000000001 +#=GS MGYP000294860436/2-38 DE [subseq from] PL=00 UP=0 BIOMES=1000000000000 +#=GS MGYP001122892151/105-179 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000413961247/1-72 DE [subseq from] PL=00 UP=0 BIOMES=0000000011000 +#=GS MGYP000545182717/2-32 DE [subseq from] PL=10 UP=0 BIOMES=0000000011000 +#=GS MGYP000536366561/122-194 DE [subseq from] PL=11 UP=0 BIOMES=0000000011000 +#=GS MGYP000318290004/17-71 DE [subseq from] PL=00 UP=0 BIOMES=0101000000000 +#=GS MGYP000498009340/65-136 DE [subseq from] PL=10 UP=0 BIOMES=0000000011000 + +chain_B MVHLTPEEKSAVTALWGKVN--V--DEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFS---DGLAHLDNLK---GTFATLSELHC--DKLHVDPENFRL-L-GN-VLV---CVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH +MGYP000809681506/1-147 MVHLTPEEKSAVTALWGKVN--V--DEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFS---DGLAHLDNLK---GTFATLSELHC--DKLHVDPENFRL-L-GN-VLV---CVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH +MGYP000131797357/10-156 MVHLSAEEKEAVLGLWGKVN--V--DEVGGEALGRLLVVYPWTQRFFESFGDLSNADAVMGNPKVKAHGKKVLQSFS---DGLKHLDNLK---GTFAKLSELHC--DQLHVDPENFRL-L-GN-VIV---VVLARRLGHDFNPDVQAAFQKVVAGVANALAHKYH +MGYP000607955645/1-147 MVHLTDAEKAAVSGLWGKVN--A--DEVGGEALGRLLVVYPWTQRYFDSFGDLSSASAIMGNAKVKAHGKKVITAFN---DGLNHLDSLK---GTFASLSELHC--DKLHVDPENFRL-L-GN-MIV---IVLGHHLGKDFTPAAQAAFQKVVAGVAAALAHKYH +MGYP001138391873/1-147 MGHFTEEDKATITSLWGKVN--V--EDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVKAHGKKVLTSLG---DAIKHLDDLK---GTFAQLSELHC--DKLHVDPENFKL-L-GN-VLV---TVLAIHFGKEFTPEVQASWQKMVTGVASALSSRYH +MGYP001111532658/8-155 MVEWTDAERSAITSLWGKID--V--GEIGPQALARLLIVYPWAQRYFKAFGDLSTNAAIMGNPKVAQHGKTVMGGLE---NAVKNLDNIK---QTYAKLSVMHS--EKLHVDPDNFRV-L-AECISL---CVAAKFCPSVFTADVQEAWQKFLAVVVSALRRQYH +MGYP000442294717/26-102 ----------------------------------RLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFS---DGLAHLDNLK---GTFATLSELHC--DKLHVDPENFRV-S--------------------------------------------- +MGYP000214952500/50-125 ----------------------------------RLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFS---DGLAHLDNLK---GTFATLSELHC--DKLHVDPENFRV----------------------------------------------- +MGYP000639461158/2-34 MVHWSAEEKQLITSVWSKVN--V--EECGAEALARWV-------------------------------------------------------------------------------------------------------------------------------- +MGYP000639461158/53-143 ---------------GGSAN--G--VCLCPPSLRRLLIVYPWTQRFFDNFGNLSSPTAIIGNPKVRAHGKKVLSSFG---EAVKNLDNIK---NTYAKLSELHC--EKLHVDPENFRV----------------------------------------------- +MGYP000321112601/1-74 -------------------------------------MVYPWTQRFFESFGDLSSPDAVMGNPKVKAHGKKVLGAFS---DGLAHLDNLK---GTFSQLSELHC--DKLHVDPENFRV-S--------------------------------------------- +MGYP000669192840/7-90 ----------------------------------RLLVVYSWTQRFFESFGDLSSADAILGNPKVKAHGKKVLDSFC---EGLKQLDDLK---GAFASLSELHC--DKLHVDPENFRVSL-GM-PVL---C---------------------------------- +MGYP000335830788/32-110 --------------------------------FHRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFG---DAIKNMDNLK---PAFAKLSELHC--DKLHVDPENFKV-S--------------------------------------------- +MGYP000559925714/32-110 --------------------------------FHRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFG---DAIKNMDNLK---PAFAKLSELHC--DKLHVDPENFKV-S--------------------------------------------- +MGYP000607025940/7-103 -------------------------------SLCRLLIVYPWTQRFFASFGNLSSATAIIGNPMVRAHGKKVLTSFG---DAVKNLDNIK---NTFSQLSELHC--DKLHVDPENFRV-R-CS-WLG---PI-PMHLQEEILP---------------------- +MGYP000450732916/72-150 -------------------------------SLYRLLIVYPWTQRFFASFGNLSSPTAILGNPMVRAHGKKVLSSFG---EAVKNLDNIK---NTYAKLSELHC--DKLHVDPENFRV----------------------------------------------- +MGYP001121356039/35-179 --GLTKDDKKYVCDVWSHIN--C--EQVGGDALIRLICVDPWTRRYFLKFGDLSCAEAIIHNAHLAAHGVKVLKSIG---DAITHIDDLR---GHYADLSAFHS--KKFHVDPANFWL-F-AG-IVS---VTVGMALGEDYTAHKQACFERFLHDVCRALSHGYY +MGYP000836687451/15-153 ---LSPADKTNVKAAWGKVGAHA--GEYGAEALERMFLSFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALT---NAVAHVDDMP---NALSALSDLHA--HKLRVDPVNFKL-L-SH-CLL---VTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY- +MGYP000172242919/33-121 --------------------------------IDRVLIVYPWTQRYFGTFGDLSNAAAILGNAKVAAHGKVVLGALD---KGVKNVDNVK---ATYTALSQLHC--LKLNVDPDNFKV-N-VQ--AL---CLLGYR----------------------------- +MGYP000585341746/8-146 ---LSGEDKSNIKAAWGKIG--GHGAEYVAEALERMFASFPTTKTYFPHF------DVSHGSAQVKGHGKKIADALA---SAAGHLDDLP---GALSALSDLHA--HKLRVDPVNFKL-L-SH-CLL---VTLASHHPADFTPAVHASLDKFLASVSTVLTSKY- +MGYP000306499386/1-66 -----------------------------------------------------------MGNPKVKAHGKKVLDSFC---EGLKQLDDLK---GAFASLSELHC--DKLHVDPENFRVSL-GS-VRV---FPVAFYFA--------------------------- +MGYP000694104832/8-83 ----------------------------------RLLIVSPWTQRHFSTFGNLSNAAAIMGNAKVAQHGKTVMGGLD---RAVKNLDDIK---NTYSALSVMHS--EKLHVDPDNFRV----------------------------------------------- +MGYP000212149699/1-52 -----------------------------------------------------------MGNPKVKAHGKKVLTSLG---DAIKHLDDLK---GTFAQLSELHC--DKLHVDPENFRV-S--------------------------------------------- +MGYP000386264740/1-52 -----------------------------------------------------------MGNPKVKAHGKKVLTSLG---DAIKHLDDLK---GTFAQLSELHC--DKLHVDPENFKV-S--------------------------------------------- +MGYP000441972666/10-52 --------------------------------------------------------------------------------------------------------------------QL-L-GN-VLV---CVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH +MGYP000304945179/1-72 --------------------------------------MYPWTQRYFGNFGNLYNAAAIMGNPMVAAHGKVVLHGLD---RALKNMDDIR---GTYAELSVLHS--EKLHVDPDNFKV----------------------------------------------- +MGYP001143026688/4-59 ------------------------------------------------------SDCAIMGNPKVKAHGKKVLISFG---KAVMLTDDLK---GTFATLSDLHC--NKLHVDPENFLV----------------------------------------------- +MGYP000270001578/32-81 -------------------------------------------------------------------------------------------------------------YLPTSSPQL-L-GN-VLV---CVLARNFGKEFTPQMQAAYQKVVAGVANALAHKYH +MGYP001069732337/13-151 ---LSAEDKKNIVQFWEFVK--GHEEAHGAEALHRMFESSPETKIYFAN-KDLSG-----GSAFLHAHGKKVMCALT---KAVGHLDDIN---GALSALSDKHA--QELMVDPANFPK-L-NH-NIM---VTFAVHCKQRLTPQVHTSLDKFLCAVAHALTCKY- +MGYP000742755994/10-46 --------------------------------------------------------------------------------------------------------------------QL-L-GN-VLV---CVLAHHFGKEFTPPVQAAYQKVVAGVANY------ +MGYP000713428126/1-50 -----------------------------------------------------------MGNAKVKAHDKKVLDSFT---KGLKHVDHLK---GVFALLSELHC--KNLHVSPENIS------------------------------------------------ +MGYP000462927881/1-41 -----------------------------------------------------------MGNPKVKAHGKKVLTSLG---DAIKHLDDLK---GTFAQLSELHC--DK--------------------------------------------------------- +MGYP000026201981/1-34 MVHLTPEEKSAVTALWGKVN--V--DEVGGEALGRLVS------------------------------------------------------------------------------------------------------------------------------- +MGYP000969813914/16-146 ----------SWTSLTSVVD--L--EDFGVNVFILVVQLAPESLQLFSFKDEKAFHDSV----LVRAYGKLLMKTVG---KIINVLHDIP---ALAVMLDELAARDPGFELRPEHFPV-L-GQ-ALL---STLQNAAGGLWSPEMQAAWIAVWTEVIDLLA---- +MGYP000969813914/178-293 ----------------------A--DQLGTDFFLRLFQRSPSLLELF-SFKD---DKPLSSSPRLRAHGSKVMATIA---NAVSGLRDLEALIPILANLAKKHA--E-YGVQEEHFPY-V-GE-ALL---GTLADALGTDWTPDVQTAWTTVWNTV--------- +MGYP000358470208/58-90 ---------------------------------------------------------------------------------WMAHLYNLK---GTFSQLSELHC--DKLHVDPENFRV-S--------------------------------------------- +MGYP000128452298/2-38 -----------------------------------------------------------------------------------------------------------------------------MV---IILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYH +MGYP000729474694/1-93 -----------------------------------MLVVYPQTKTYFSHWSDIT-P----GSAPVMKHGRTVMGGVA---TAVGVIDDLI---GGLLTLSELHA--FQLRIDPANFKV-K------T---YYIAYIKGERCTCPMQFASAK-------------- +MGYP000701481948/4-73 --------------------------------------SFPTTKTYFPHF-DLS-----HGSAQVKGHGKKVADALT---NAVAHVDDMP---NALSALSDLHA--HKLRVDPVNFKV-S-GG-P---------------------------------------- +MGYP000539442244/4-70 --------------------------------------SFPTTKTYFPHF-DLS-----HGSAQVKGHGAKVAAALT---KAVEHLDDLP---GALSELSDLHA--HKLRVDPVNFKV-S--------------------------------------------- +MGYP001145220054/370-451 -------------------------------------------------------------------QEKKLINALQLVVSNLRNVDTLA---KALTTLGEKH---QKYGAEPDHYNA-V-AA-TLL---DVMQEFAGELWTPEVKGAWEHALNTIARVML---- +MGYP001145220054/517-598 --------------------------------------------------------------------EKKLLNALQLVINNLRNVDTLA---KALSTLGEKHQ---QYGVLPEHYSA-A-AN-ILI---GVMKSMAGDLWTDELHSAWEHALGVVAKVMLD--- +MGYP001152833638/1-56 -------------------------------------------------------------------------------------MDNLK---PAFAKLSELHC--DKLHVDPENFRV-SPGD-ASLFSFYFLILHFGS-FTFPGKTAV---------------- +MGYP001132506692/1-33 MVHLTDAEKAAVSGLWGKVN--A--DEVGGEALGRLV-------------------------------------------------------------------------------------------------------------------------------- +MGYP000294860436/2-38 -----------------------------------------------------------------------------------------------------------------------------LV---TVLAIHFGKEFTPEVQASWQKMVTAVASALSSRYH +MGYP001122892151/105-179 ---------------------------------PRLFLSHPQTKTYFPHF-DLS-----HGSAQVKGHGKKVADALT---NAVAHVDDMP---NALSALSDLHA--HKLRGDQVNFKV-S-GG-P---------------------------------------- +MGYP000413961247/1-72 -----------------------------------MLVVYPQTKTYFSHWKDVSP-----GSAAIRKHGLTVMTGYM---DAVEKIDDIA---NGLLTLSELHA--FTLRVDPANFKV-C-D------------------------------------------- +MGYP000545182717/2-32 MVHFTAEEKAAVTSLWSKMN--V--EEAGGEALGR---------------------------------------------------------------------------------------------------------------------------------- +MGYP000536366561/122-194 ---------------------------------PRLFLSHPQTKTYFPHF-DL-----HPGSAQLRAHGSKVVAAVG---DAVKSIDDIG---GALSKLSELHA--YILRVDPVNFKV-R-G------------------------------------------- +MGYP000318290004/17-71 -----------------------------------------------------------PGSAQVAAHGQKVADALS---LAVNHLDDLP---GTLSYLRELHT--HKLRVDPVFFKV-S-SR-V---------------------------------------- +MGYP000498009340/65-136 ----------------------------------RTFLAFPATKTYFSH-LDLS-----PGSSQVRAHGQKVADALS---LAVERLDDLP---HALSALSHLHA--CQLRVDPASFQV-S-G------------------------------------------- +#=GC RF xxxxxxxxxxxxxxxxxxxx..x..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxx...xxxxxxxxxxx..xxxxxxxxxxxx.x.xx.xxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx +//